CsaV3_4G005640 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGGGTTGGGAGGTTTTTGGGAGAGAAGCCGGCGAGGGGAGACGGTTACGTGGCTTGTTTTGTATCAGACGTGGCGGTTATTTACCTCAGTCGTATCTTCGAGGGTTGCGTTGAATAGGACACGTATCCACTTTTCTCCAAGTTTGGTAATTTTAGTTCTTGGTAGTCCGATTTCCACCAAATCAGGTTTACCCATTCCTCATTCAGTCTTTTCTTTTTGCAAATTTATATGCATTACGGTTATTTAGGAGATTAGCAATTACAAAACTCATTGAATATGTGTTTGACAATAACCCATATATTTGTTATAAAGGAAAAAAGAAAACCACATTCTATTATCCAAATCGAGTAAATTTTGGATATATATATATCCATCTACACCCTACAAAAGTGATTATATAGAAATTTAAAAAGAAAACCATACGATATATGCATTACGAATGCGGCCAAGAATTCATCCCCTAAAATTTAAACACTTGGATCACGTTGCCTAGTAATTACAAGTCCCTTCATCTTCAAGGACATCCAACTAAAATTTGGATGACAATGATATATAGGGATTATTTTAAAAAGTAATAAATTTTATAAAATATTTATAACCTACACCAAATTATATCACTTATAATTATTGATATATTATAATAATATAATCTAAAATTTTGCAATATTTAAATTTGTTTTATTATTTTTTAAAATATCTCTAATTTAAAATTATTATAATTAATTATTAAAATTAATTATTTTTACAAGAAACATTTTTAAAAATAAAATATTTAAAAAACTATAGCAAACTTTTGAATTATATCATTAATAGTCTTTTATCATGGTAGCATATCAATCACTATCAGTGACAGAATTTGTCATATGTTATAAATATTTTATAAAATCTATTTTTTTTTTAAAAAATCACCTTTTTTACCGTCACACAAAATATAATTTTTAATAAACATTCACATAATTGAAAGTGACGATTTAATTAAAGTGGATGTTATAAGTGAAGATTTTGAAATTTAAGAATAAAAACAAAAACTCAAACTTCAAACACAAAATTATAGCATATTGAAATTTACAACTAAAAACACTAAAAACTTGATTAAGTTTTTGGAGCATATTCGTATTAATTAAATTAAAATTTTTAATTAATATGAATATTTTATTAATAAATTAATTTAATCAAGTTTTTGTTTTTATTCTTACATTTCAAAATCTTCACTTACAACATCCACTTTAGTTAAATTGTAACTGAATGTTTATTAAAAAATATATTTTTTGTGATGGTAAAAATAATTGATCGAACATTTTCGAAAATAGTAAAATAAATTAAAATATTTACAAACTATAAATTTTTTTGAATTTTATCACGATATCATATCGGTGACTATTCGTGATAGAATTTGCTATAATTGTAAATATTTTTGTAAAATCTACTATTTTTTTAAAAATAATCATAATTAATTTTAATAATTTACTTTTAAATTAGAAATAATTTTAAAATTATAAAATAAATTAAAATATTACAAGCTATAGCAAAATTTTAGATTCTATCATTATAGCATATGAATTAATGAGTTTGAGTTATAGAATTTGTTATAGATTATAAATATTTTTTGTAAAATTTGTTATTTTTTGAAAATTCTCATTATATTTAGTTAATGGAAGTTTAATTATAAAAGGTATCTAATAAAATAAGTGTTGAAAGATGTCAAAAAAAGTTATTGAATTTATAAAGAAGAAACAAGTAAAGAAGTTGGTTGAATATATAAGGATAACCCTTTTTTGTTTTGTGGGAATGGGTAGAAGAAAGTTCTTGTAAAAATGATTTTGGCAAACCGTGTTTACACATAGAAATCACTATTAATAAGTCAACATTCTAGTCAACAAAACTTTAGAATAAACAAACTTTTGTCCCACAAATTTAACTTAGAGATTAAAATAATAAAGCAACGTTTTTCTTAATTATATATATATAAGACTAAGCAAAAACAATGATTTTAATTAGTAAAGTATACCACCCTTTAGAGGTTCATTTCTATCTTGCACTATTTTAAATGGCATTGCCATTATTAATACATAGTACCCAATATATAGTAGTTAGGTGCAATGCATGACTCAGCTTCTTTTTAATAAAGATATTAATAAGCCACATGTTATTAGGATTCTGTTGTTTCAAGTTGATATGATTAGTCTCACATGTCATTCTTTTTAATTATTAACAACCATACTATTTAACCACATACTATAAGGTTGTGATTTATTTCAAGTTGGCATTGATAAGTGTCACAATGCATAGATTATATTAAATGATTTATTTGCTAAATTTAAATTGTTTTCAAATATCTCACCAAACTCATTGTTTTCTATATGGAAATATAATACAACATTTGTTGTAAAATCTAAACTATTATTTGACACCGTAATTGAAAATTCTAGTGGAGTGAGTGAACAGATAGAGAAGAAATAAATTTGTTCAATTTTTCTTTTTTATTTTCAACACCAAAATATTGAAGGTTTTAGCGATGAATTTATTTATACAATATTGACATATTTAGTCTAGATATTCACAGCCTACATATGTTACTCAAATTTCAATAACCTTCCATTGAATTACATGTTGTAATTTCTTGATATCCTTTTTCTTTCTACCAATTTCACTTTTTAAAAACCTAATGATATAAGCAGTTACACAAATATGATAAAATGACCAATAGAAAAGTATTTTATATATTACCTTTAATTTGTTTATAAAAATGGTTATACAATCAATTAAGTCTTATCCCTAACCATGTTATCTAATGGAGTTGCTTCTTAATTTCATCAATGGTAGTGCTGAGATCATGAATGATGATACATCTCTCCAAACTATTAAAAATATAGAAACCCAAATCCAAATCCATCGTCTCGATTGTTTGACTTTGAAGTCTATACCTTCACTGCATATCTTCATGAGCTAATAATTGAACTATTTGTCTTCCATTCATAGAAAGACTATTAAGCACATTCACACACAAAACCCCTTCCCCACATTCACCTTCATAAACCCAAACCAAATATAATCTCTCCACAATTACTCACTCAAATTCAAATCCAAATCCATGGCTTCAAATCTCAAGAAACTTTCATGCCTCCCTTTCTTCTTCCTCATCTTCTTCTTCTTCGTTACCATTTCCTCTGCGGAGCTTTGCAATCCAAATGACAAAAAAGTCCTTCTAAAAATCAAAAAAGCCTTCAACAATCCCTACATTCTCACCTCTTGGGACCCGCAAACAGACTGCTGCCATTGGTACTGTGTCAAATGCAATCGAACTACCCATCGAATCATCTCTCTCACCATCTTCGCCGACGACCGTCTCACCGGCCAAATCCCACCCGAAGTCGGCGACCTTCCATTCCTACAAACCCTTATGCTCCACAAGCTCCCAAATCTCACCGGCCCCATCCAACCCACCATAGCCAAACTACGTAACCTCGTATTCCTCGACCTCAGCTGGAACGGTCTCTCCGGCGAAATCCCAGATTCCTTGAGCACTCTAAAAAATCTCTTCATTCTTACTCTCTCATTCAACAAACTCACCGGAGAAATCCCTAGTTCCCTCTCTGAACTCCCTAACTTGGGCGGTCTCCGGTTGGATCGGAATCAATTAACAGGACAAATCCCTGAATCCTTCGGCTATTTCAGCGGAGAACAAGCCCCGGATTTGATTCTTTCACACAATCAACTTTCTGGCAAAATCCCTTCTTCTTTGTCGAGATTGAATTCCACTTCCATCGATTTGTCCCGTAACAAACTTGAAGGCGATGCGTCCATGTTCTTCGGCGCCAACAAGATGATCCAGATTCTTGATTTGTCGAGGAATTTGTTGGAGTTTAATTTGTCGGAGGTAGTGTTTCCTCAGAGTTTGACTTCGTTGGATCTTAATCATAATAAGGTGTATGGGGGTTTGCCGCCGGTGATGACGGAACTGAAATTGCAATATTTGAACGTTAGTTATAATCGACTTTGTGGTCCGATCCCGGTGGGTGGGGATATGCAGAGTTTTGATTTGTATTCTTATTTCCATAATAAGTGTTTGTGTGGAGCACCGCTTGGTGATTGCAAATGA ATGTGGGGTTGGGAGGTTTTTGGGAGAGAAGCCGGCGAGGGGAGACGGTTACGTGGCTTGTTTTGTATCAGACGTGGCGACTGCTGCCATTGGTACTGTGTCAAATGCAATCGAACTACCCATCGAATCATCTCTCTCACCATCTTCGCCGACGACCGTCTCACCGGCCAAATCCCACCCGAAGTCGGCGACCTTCCATTCCTACAAACCCTTATGCTCCACAAGCTCCCAAATCTCACCGGCCCCATCCAACCCACCATAGCCAAACTACGTAACCTCGTATTCCTCGACCTCAGCTGGAACGGTCTCTCCGGCGAAATCCCAGATTCCTTGAGCACTCTAAAAAATCTCTTCATTCTTACTCTCTCATTCAACAAACTCACCGGAGAAATCCCTAGTTCCCTCTCTGAACTCCCTAACTTGGGCGGTCTCCGGTTGGATCGGAATCAATTAACAGGACAAATCCCTGAATCCTTCGGCTATTTCAGCGGAGAACAAGCCCCGGATTTGATTCTTTCACACAATCAACTTTCTGGCAAAATCCCTTCTTCTTTGTCGAGATTGAATTCCACTTCCATCGATTTGTCCCGTAACAAACTTGAAGGCGATGCGTCCATGTTCTTCGGCGCCAACAAGATGATCCAGATTCTTGATTTGTCGAGGAATTTGTTGGAGTTTAATTTGTCGGAGGTAGTGTTTCCTCAGAGTTTGACTTCGTTGGATCTTAATCATAATAAGGTGTATGGGGGTTTGCCGCCGGTGATGACGGAACTGAAATTGCAATATTTGAACGTTAGTTATAATCGACTTTGTGGTCCGATCCCGGTGGGTGGGGATATGCAGAGTTTTGATTTGTATTCTTATTTCCATAATAAGTGTTTGTGTGGAGCACCGCTTGGTGATTGCAAATGA ATGTGGGGTTGGGAGGTTTTTGGGAGAGAAGCCGGCGAGGGGAGACGGTTACGTGGCTTGTTTTGTATCAGACGTGGCGACTGCTGCCATTGGTACTGTGTCAAATGCAATCGAACTACCCATCGAATCATCTCTCTCACCATCTTCGCCGACGACCGTCTCACCGGCCAAATCCCACCCGAAGTCGGCGACCTTCCATTCCTACAAACCCTTATGCTCCACAAGCTCCCAAATCTCACCGGCCCCATCCAACCCACCATAGCCAAACTACGTAACCTCGTATTCCTCGACCTCAGCTGGAACGGTCTCTCCGGCGAAATCCCAGATTCCTTGAGCACTCTAAAAAATCTCTTCATTCTTACTCTCTCATTCAACAAACTCACCGGAGAAATCCCTAGTTCCCTCTCTGAACTCCCTAACTTGGGCGGTCTCCGGTTGGATCGGAATCAATTAACAGGACAAATCCCTGAATCCTTCGGCTATTTCAGCGGAGAACAAGCCCCGGATTTGATTCTTTCACACAATCAACTTTCTGGCAAAATCCCTTCTTCTTTGTCGAGATTGAATTCCACTTCCATCGATTTGTCCCGTAACAAACTTGAAGGCGATGCGTCCATGTTCTTCGGCGCCAACAAGATGATCCAGATTCTTGATTTGTCGAGGAATTTGTTGGAGTTTAATTTGTCGGAGGTAGTGTTTCCTCAGAGTTTGACTTCGTTGGATCTTAATCATAATAAGGTGTATGGGGGTTTGCCGCCGGTGATGACGGAACTGAAATTGCAATATTTGAACGTTAGTTATAATCGACTTTGTGGTCCGATCCCGGTGGGTGGGGATATGCAGAGTTTTGATTTGTATTCTTATTTCCATAATAAGTGTTTGTGTGGAGCACCGCTTGGTGATTGCAAATGA MWGWEVFGREAGEGRRLRGLFCIRRGDCCHWYCVKCNRTTHRIISLTIFADDRLTGQIPPEVGDLPFLQTLMLHKLPNLTGPIQPTIAKLRNLVFLDLSWNGLSGEIPDSLSTLKNLFILTLSFNKLTGEIPSSLSELPNLGGLRLDRNQLTGQIPESFGYFSGEQAPDLILSHNQLSGKIPSSLSRLNSTSIDLSRNKLEGDASMFFGANKMIQILDLSRNLLEFNLSEVVFPQSLTSLDLNHNKVYGGLPPVMTELKLQYLNVSYNRLCGPIPVGGDMQSFDLYSYFHNKCLCGAPLGDCK
BLAST of CsaV3_4G005640 vs. NCBI nr
Match: NP_001267615.1 (polygalacturonase inhibitor-like precursor [Cucumis sativus] >AFU51544.1 polygalacturonase-inhibiting protein 2 [Cucumis sativus] >KGN53308.1 hypothetical protein Csa_4G046710 [Cucumis sativus]) HSP 1 Score: 301.2 bits (770), Expect = 3.9e-78 Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0
BLAST of CsaV3_4G005640 vs. NCBI nr
Match: XP_008452081.1 (PREDICTED: polygalacturonase inhibitor-like [Cucumis melo]) HSP 1 Score: 283.9 bits (725), Expect = 6.5e-73 Identity = 268/277 (96.75%), Postives = 272/277 (98.19%), Query Frame = 0
BLAST of CsaV3_4G005640 vs. NCBI nr
Match: XP_023517351.1 (polygalacturonase inhibitor-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 255.8 bits (652), Expect = 1.9e-64 Identity = 211/277 (76.17%), Postives = 221/277 (79.78%), Query Frame = 0
BLAST of CsaV3_4G005640 vs. NCBI nr
Match: XP_022925134.1 (polygalacturonase inhibitor-like [Cucurbita moschata]) HSP 1 Score: 249.2 bits (635), Expect = 1.8e-62 Identity = 199/276 (72.10%), Postives = 211/276 (76.45%), Query Frame = 0
BLAST of CsaV3_4G005640 vs. NCBI nr
Match: XP_022966389.1 (polygalacturonase inhibitor-like [Cucurbita maxima]) HSP 1 Score: 244.6 bits (623), Expect = 4.4e-61 Identity = 202/277 (72.92%), Postives = 214/277 (77.26%), Query Frame = 0
BLAST of CsaV3_4G005640 vs. TAIR10
Match: AT5G06860.1 (polygalacturonase inhibiting protein 1) HSP 1 Score: 155.2 bits (391), Expect = 6.3e-38 Identity = 175/279 (62.72%), Postives = 199/279 (71.33%), Query Frame = 0
BLAST of CsaV3_4G005640 vs. TAIR10
Match: AT5G06870.1 (polygalacturonase inhibiting protein 2) HSP 1 Score: 150.2 bits (378), Expect = 2.0e-36 Identity = 172/279 (61.65%), Postives = 195/279 (69.89%), Query Frame = 0
BLAST of CsaV3_4G005640 vs. TAIR10
Match: AT3G12145.1 (Leucine-rich repeat (LRR) family protein) HSP 1 Score: 83.6 bits (205), Expect = 2.3e-16 Identity = 188/279 (67.38%), Postives = 215/279 (77.06%), Query Frame = 0
BLAST of CsaV3_4G005640 vs. Swiss-Prot
Match: sp|A7PW81|PGIP_VITVI (Polygalacturonase inhibitor OS=Vitis vinifera OX=29760 GN=pgip PE=1 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 7.9e-38 Identity = 214/277 (77.26%), Postives = 233/277 (84.12%), Query Frame = 0
BLAST of CsaV3_4G005640 vs. Swiss-Prot
Match: sp|Q9M5J9|PGIP1_ARATH (Polygalacturonase inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=PGIP1 PE=1 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.1e-36 Identity = 175/279 (62.72%), Postives = 199/279 (71.33%), Query Frame = 0
BLAST of CsaV3_4G005640 vs. Swiss-Prot
Match: sp|Q9M5J8|PGIP2_ARATH (Polygalacturonase inhibitor 2 OS=Arabidopsis thaliana OX=3702 GN=PGIP2 PE=2 SV=2) HSP 1 Score: 150.2 bits (378), Expect = 3.7e-35 Identity = 172/279 (61.65%), Postives = 195/279 (69.89%), Query Frame = 0
BLAST of CsaV3_4G005640 vs. Swiss-Prot
Match: sp|Q05091|PGIP_PYRCO (Polygalacturonase inhibitor OS=Pyrus communis OX=23211 GN=PGIP PE=1 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 8.2e-35 Identity = 192/277 (69.31%), Postives = 205/277 (74.01%), Query Frame = 0
BLAST of CsaV3_4G005640 vs. Swiss-Prot
Match: sp|Q9LH52|FLOR1_ARATH (Leucine-rich repeat protein FLOR 1 OS=Arabidopsis thaliana OX=3702 GN=FLR1 PE=1 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 4.2e-15 Identity = 188/279 (67.38%), Postives = 215/279 (77.06%), Query Frame = 0
BLAST of CsaV3_4G005640 vs. TrEMBL
Match: tr|K7QLL6|K7QLL6_CUCSA (Polygalacturonase-inhibiting protein 2 OS=Cucumis sativus OX=3659 GN=PGIP2 PE=2 SV=1) HSP 1 Score: 301.2 bits (770), Expect = 2.6e-78 Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0
BLAST of CsaV3_4G005640 vs. TrEMBL
Match: tr|A0A1S3BU59|A0A1S3BU59_CUCME (polygalacturonase inhibitor-like OS=Cucumis melo OX=3656 GN=LOC103493193 PE=4 SV=1) HSP 1 Score: 283.9 bits (725), Expect = 4.3e-73 Identity = 268/277 (96.75%), Postives = 272/277 (98.19%), Query Frame = 0
BLAST of CsaV3_4G005640 vs. TrEMBL
Match: tr|A0A0F7LFW0|A0A0F7LFW0_LUFAC (Polygalacturonase-inhibiting protein (Fragment) OS=Luffa acutangula OX=56866 GN=PGIP PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 6.7e-58 Identity = 200/268 (74.63%), Postives = 210/268 (78.36%), Query Frame = 0
BLAST of CsaV3_4G005640 vs. TrEMBL
Match: tr|K7QJC6|K7QJC6_CUCSA (Polygalacturonase-inhibiting protein 1 OS=Cucumis sativus OX=3659 GN=PGIP1 PE=2 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 2.4e-47 Identity = 186/277 (67.15%), Postives = 208/277 (75.09%), Query Frame = 0
BLAST of CsaV3_4G005640 vs. TrEMBL
Match: tr|A0A0A0KZN2|A0A0A0KZN2_CUCSA (Polygalacturonase-inhibiting protein OS=Cucumis sativus OX=3659 GN=Csa_4G154320 PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 2.4e-47 Identity = 186/277 (67.15%), Postives = 208/277 (75.09%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |