CsaV3_4G005170 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G005170
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionPentatricopeptide repeat-containing protein, mitochondrial
Locationchr4 : 3390581 .. 3391825 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCTTCTCCATCTCCACCCGCCACCACATACGTCGACTATCTACGGCAGCCGCCGCCGCCGCCACCAATGCCACGGCGACGACGTCCTCTTCTTCATTATCCATCTCAAGAGCGAAGTCTAAACTTAGAACCGAGTATGATCCAGATAAAGCCGTAGAAATTTACTCTTCTGTTTCTAGTCACTACACCTCTCCTGTCACTTCTCGTTACGCTCAAGAAATAACCATCCGCCGCCTTGCTAAGGCCCGTCGATTCAAGGACATCGAATCCCTAATCGAGTCCCATAAAAACGACCCGAAGATCACTCAGGAACCTTTTTTGTCCACCCTGATTCGATCCTACGGTCGAGTTGGTATGTTCGAGCACGCTATGAGGACTTATAATCAAATGGGTGATTTAGGAACTCCACGATCCGCACTATCATTTAATGCCCTGTTAACTGCTTGTAACAATTCGAAGCAATTCGACAAGGTTCCCCAACTGTTCGACGAAATGCCCAAGAGATATAATTTCTCTCCCAATAAGTTCTCGTACGGTATCCTGGTTAAATCCTATTGCGACGCGGGTTCTCCTGAGAAAGCCATGGAGATTGTACGAGAAATGGAGGAAAATGGCGTGGAGGTAAATGCTGTGACATTCACAACCATATTAAATGCTCTGTACAAGAAGGGTGACAGCGCAGAGGCAGAGAAAATATGGGAGACGATGATATCAAAAGGGTGTGAACTTGATGTTGGAGCCTATAATGTTAGATTGATGCACGAACATGGTGGCAAGCCAGAGCATGTACAAGCTTTAATCGAGGAAATGGCTAATTCAGGTTTGAAACCCGATGCAATTAGTTATAATTACTTAATGACTTGTTATTGTAAGAATGGGATGTTTGATGAAGCAAAGAAGGTGTATAACGATATGGAGATAAATGGGTGTAATAAGAATGCTGCAACTTTTAGGACACTTATTTATCACCTTTGTAGAAATGGGGAGTATGAGAAAGGGTACAAGGTTTTTAAGGAGAGTGTGAAGATGAATAAGATTCCTGATTTTAACACGCTGAAGTATTTGGTGGAGGGGCTAGTGGAGAAGAAGATGATGAGAGAAGCCAAAGGTTTAATCAGGACTATAAGGAAGAAATTCCCTCCTGATACTTTGAAGGCTTGGAGAGAAGTTGAGGAAGGGGTTGGTTTGGCTTCCGCTGGTGATGATGTTTCTTCTAAGGATGATGATGAAACTAGAACATGA

mRNA sequence

ATGTCCTTCTCCATCTCCACCCGCCACCACATACGTCGACTATCTACGGCAGCCGCCGCCGCCGCCACCAATGCCACGGCGACGACGTCCTCTTCTTCATTATCCATCTCAAGAGCGAAGTCTAAACTTAGAACCGAGTATGATCCAGATAAAGCCGTAGAAATTTACTCTTCTGTTTCTAGTCACTACACCTCTCCTGTCACTTCTCGTTACGCTCAAGAAATAACCATCCGCCGCCTTGCTAAGGCCCGTCGATTCAAGGACATCGAATCCCTAATCGAGTCCCATAAAAACGACCCGAAGATCACTCAGGAACCTTTTTTGTCCACCCTGATTCGATCCTACGGTCGAGTTGGTATGTTCGAGCACGCTATGAGGACTTATAATCAAATGGGTGATTTAGGAACTCCACGATCCGCACTATCATTTAATGCCCTGTTAACTGCTTGTAACAATTCGAAGCAATTCGACAAGGTTCCCCAACTGTTCGACGAAATGCCCAAGAGATATAATTTCTCTCCCAATAAGTTCTCGTACGGTATCCTGGTTAAATCCTATTGCGACGCGGGTTCTCCTGAGAAAGCCATGGAGATTGTACGAGAAATGGAGGAAAATGGCGTGGAGGTAAATGCTGTGACATTCACAACCATATTAAATGCTCTGTACAAGAAGGGTGACAGCGCAGAGGCAGAGAAAATATGGGAGACGATGATATCAAAAGGGTGTGAACTTGATGTTGGAGCCTATAATGTTAGATTGATGCACGAACATGGTGGCAAGCCAGAGCATGTACAAGCTTTAATCGAGGAAATGGCTAATTCAGGTTTGAAACCCGATGCAATTAGTTATAATTACTTAATGACTTGTTATTGTAAGAATGGGATGTTTGATGAAGCAAAGAAGGTGTATAACGATATGGAGATAAATGGGTGTAATAAGAATGCTGCAACTTTTAGGACACTTATTTATCACCTTTGTAGAAATGGGGAGTATGAGAAAGGGTACAAGGTTTTTAAGGAGAGTGTGAAGATGAATAAGATTCCTGATTTTAACACGCTGAAGTATTTGGTGGAGGGGCTAGTGGAGAAGAAGATGATGAGAGAAGCCAAAGGTTTAATCAGGACTATAAGGAAGAAATTCCCTCCTGATACTTTGAAGGCTTGGAGAGAAGTTGAGGAAGGGGTTGGTTTGGCTTCCGCTGGTGATGATGTTTCTTCTAAGGATGATGATGAAACTAGAACATGA

Coding sequence (CDS)

ATGTCCTTCTCCATCTCCACCCGCCACCACATACGTCGACTATCTACGGCAGCCGCCGCCGCCGCCACCAATGCCACGGCGACGACGTCCTCTTCTTCATTATCCATCTCAAGAGCGAAGTCTAAACTTAGAACCGAGTATGATCCAGATAAAGCCGTAGAAATTTACTCTTCTGTTTCTAGTCACTACACCTCTCCTGTCACTTCTCGTTACGCTCAAGAAATAACCATCCGCCGCCTTGCTAAGGCCCGTCGATTCAAGGACATCGAATCCCTAATCGAGTCCCATAAAAACGACCCGAAGATCACTCAGGAACCTTTTTTGTCCACCCTGATTCGATCCTACGGTCGAGTTGGTATGTTCGAGCACGCTATGAGGACTTATAATCAAATGGGTGATTTAGGAACTCCACGATCCGCACTATCATTTAATGCCCTGTTAACTGCTTGTAACAATTCGAAGCAATTCGACAAGGTTCCCCAACTGTTCGACGAAATGCCCAAGAGATATAATTTCTCTCCCAATAAGTTCTCGTACGGTATCCTGGTTAAATCCTATTGCGACGCGGGTTCTCCTGAGAAAGCCATGGAGATTGTACGAGAAATGGAGGAAAATGGCGTGGAGGTAAATGCTGTGACATTCACAACCATATTAAATGCTCTGTACAAGAAGGGTGACAGCGCAGAGGCAGAGAAAATATGGGAGACGATGATATCAAAAGGGTGTGAACTTGATGTTGGAGCCTATAATGTTAGATTGATGCACGAACATGGTGGCAAGCCAGAGCATGTACAAGCTTTAATCGAGGAAATGGCTAATTCAGGTTTGAAACCCGATGCAATTAGTTATAATTACTTAATGACTTGTTATTGTAAGAATGGGATGTTTGATGAAGCAAAGAAGGTGTATAACGATATGGAGATAAATGGGTGTAATAAGAATGCTGCAACTTTTAGGACACTTATTTATCACCTTTGTAGAAATGGGGAGTATGAGAAAGGGTACAAGGTTTTTAAGGAGAGTGTGAAGATGAATAAGATTCCTGATTTTAACACGCTGAAGTATTTGGTGGAGGGGCTAGTGGAGAAGAAGATGATGAGAGAAGCCAAAGGTTTAATCAGGACTATAAGGAAGAAATTCCCTCCTGATACTTTGAAGGCTTGGAGAGAAGTTGAGGAAGGGGTTGGTTTGGCTTCCGCTGGTGATGATGTTTCTTCTAAGGATGATGATGAAACTAGAACATGA

Protein sequence

MSFSISTRHHIRRLSTAAAAAATNATATTSSSSLSISRAKSKLRTEYDPDKAVEIYSSVSSHYTSPVTSRYAQEITIRRLAKARRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRVGMFEHAMRTYNQMGDLGTPRSALSFNALLTACNNSKQFDKVPQLFDEMPKRYNFSPNKFSYGILVKSYCDAGSPEKAMEIVREMEENGVEVNAVTFTTILNALYKKGDSAEAEKIWETMISKGCELDVGAYNVRLMHEHGGKPEHVQALIEEMANSGLKPDAISYNYLMTCYCKNGMFDEAKKVYNDMEINGCNKNAATFRTLIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVEGLVEKKMMREAKGLIRTIRKKFPPDTLKAWREVEEGVGLASAGDDVSSKDDDETRT
Homology
[Close]
BLAST of CsaV3_4G005170 vs. NCBI nr
Match: KGN53262.1 (hypothetical protein Csa_4G038790 [Cucumis sativus])

HSP 1 Score: 604.0 bits (1556), Expect = 3.9e-169
Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 0 

Query: 47  YDPDKAVEIYSSVSSHYTSPVTSRYAQEITIRRLAKARRFKDIESLIESHKNDPKITQEP 106
           YDPDKAVEIYSSVSSHYTSPVTSRYAQEITIRRLAKARRFKDIESLIESHKNDPKITQEP
Sbjct: 78  YDPDKAVEIYSSVSSHYTSPVTSRYAQEITIRRLAKARRFKDIESLIESHKNDPKITQEP 137

Query: 107 FLSTLIRSYGRVGMFEHAMRTYNQMGDLGTPRSALSFNALLTACNNSKQFDKVPQLXXXX 166
           FLSTLIRSYGRVGMFEHAMRTYNQMGDLGTPRSALSFNALLTACNNSKQFDKVPQLXXXX
Sbjct: 138 FLSTLIRSYGRVGMFEHAMRTYNQMGDLGTPRSALSFNALLTACNNSKQFDKVPQLXXXX 197

Query: 167 XXXXXXXXXXXXYGILVKSYCDAGSPEKAMEIVREMEENGVEVNAVTFTTILNALYKKGD 226
           XXXXXXXXXXXXYGILVKSYCDAGSPEKAMEIVREMEENGVEVNAVTFTTILNALYKKGD
Sbjct: 198 XXXXXXXXXXXXYGILVKSYCDAGSPEKAMEIVREMEENGVEVNAVTFTTILNALYKKGD 257

Query: 227 SAEAEKIWETMISKGCELDVGAYNVRLMHEHGGKPEHVQALIEEMANSGLKPDAISYNYL 286
           SAEAEKIWETMISKGCELDVGAYNVRLMHEHGGKPEHVQALIEEMANSGLKPDAISYNYL
Sbjct: 258 SAEAEKIWETMISKGCELDVGAYNVRLMHEHGGKPEHVQALIEEMANSGLKPDAISYNYL 317

Query: 287 MTCYCKNGMFDEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVKMNK 346
           MTCYCKNGMFDEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVKMNK
Sbjct: 318 MTCYCKNGMFDEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVKMNK 377

Query: 347 IPDFNTLKYLVEGLVEKKMMREAKGLIRTIRKKFPPDTLKAWREVEEGVGLASAGDDVSS 406
           IPDFNTLKYLVEGLVEKKMMREAKGLIRTIRKKFPPDTLKAWREVEEGVGLASAGDDVSS
Sbjct: 378 IPDFNTLKYLVEGLVEKKMMREAKGLIRTIRKKFPPDTLKAWREVEEGVGLASAGDDVSS 437

Query: 407 KDDDETRT 415
           KDDDETRT
Sbjct: 438 KDDDETRT 445

[Close]
BLAST of CsaV3_4G005170 vs. NCBI nr
Match: XP_011654338.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 601.3 bits (1549), Expect = 2.5e-168
Identity = 367/367 (100.00%), Postives = 367/367 (100.00%), Query Frame = 0 

Query: 48  DPDKAVEIYSSVSSHYTSPVTSRYAQEITIRRLAKARRFKDIESLIESHKNDPKITQEPF 107
           DPDKAVEIYSSVSSHYTSPVTSRYAQEITIRRLAKARRFKDIESLIESHKNDPKITQEPF
Sbjct: 52  DPDKAVEIYSSVSSHYTSPVTSRYAQEITIRRLAKARRFKDIESLIESHKNDPKITQEPF 111

Query: 108 LSTLIRSYGRVGMFEHAMRTYNQMGDLGTPRSALSFNALLTACNNSKQFDKVPQLXXXXX 167
           LSTLIRSYGRVGMFEHAMRTYNQMGDLGTPRSALSFNALLTACNNSKQFDKVPQLXXXXX
Sbjct: 112 LSTLIRSYGRVGMFEHAMRTYNQMGDLGTPRSALSFNALLTACNNSKQFDKVPQLXXXXX 171

Query: 168 XXXXXXXXXXXYGILVKSYCDAGSPEKAMEIVREMEENGVEVNAVTFTTILNALYKKGDS 227
           XXXXXXXXXXXYGILVKSYCDAGSPEKAMEIVREMEENGVEVNAVTFTTILNALYKKGDS
Sbjct: 172 XXXXXXXXXXXYGILVKSYCDAGSPEKAMEIVREMEENGVEVNAVTFTTILNALYKKGDS 231

Query: 228 AEAEKIWETMISKGCELDVGAYNVRLMHEHGGKPEHVQALIEEMANSGLKPDAISYNYLM 287
           AEAEKIWETMISKGCELDVGAYNVRLMHEHGGKPEHVQALIEEMANSGLKPDAISYNYLM
Sbjct: 232 AEAEKIWETMISKGCELDVGAYNVRLMHEHGGKPEHVQALIEEMANSGLKPDAISYNYLM 291

Query: 288 TCYCKNGMFDEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVKMNKI 347
           TCYCKNGMFDEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVKMNKI
Sbjct: 292 TCYCKNGMFDEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVKMNKI 351

Query: 348 PDFNTLKYLVEGLVEKKMMREAKGLIRTIRKKFPPDTLKAWREVEEGVGLASAGDDVSSK 407
           PDFNTLKYLVEGLVEKKMMREAKGLIRTIRKKFPPDTLKAWREVEEGVGLASAGDDVSSK
Sbjct: 352 PDFNTLKYLVEGLVEKKMMREAKGLIRTIRKKFPPDTLKAWREVEEGVGLASAGDDVSSK 411

Query: 408 DDDETRT 415
           DDDETRT
Sbjct: 412 DDDETRT 418

[Close]
BLAST of CsaV3_4G005170 vs. NCBI nr
Match: XP_008453729.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g36680, mitochondrial [Cucumis melo])

HSP 1 Score: 563.9 bits (1452), Expect = 4.5e-157
Identity = 360/402 (89.55%), Postives = 373/402 (92.79%), Query Frame = 0 

Query: 1   MSFSISTRHHIRRLST--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDPDKAVEIYSS 60
           MSFSISTRHHIRRLST  XXXXXXXXXXXXXXXXXXXXXXXXXX    YDPDKA+EIYSS
Sbjct: 1   MSFSISTRHHIRRLSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRNEYDPDKALEIYSS 60

Query: 61  VSSHYTSPVTSRYAQEITIRRLAKARRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRV 120
           VSSHYTSPVTSRYAQEITIRRLAK+RRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRV
Sbjct: 61  VSSHYTSPVTSRYAQEITIRRLAKSRRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRV 120

Query: 121 GMFEHAMRTYNQMGDLGTPRSALSFNALLTACNNSKQFDKVPQLXXXXXXXXXXXXXXXX 180
           GMFEHAMRTYNQMGDLGTPRSALSFNALL+ACN+SKQFDKVPQL                
Sbjct: 121 GMFEHAMRTYNQMGDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRYNFSPNKIS 180

Query: 181 YGILVKSYCDAGSPEKAMEIVREMEENGVEVNAVTFTTILNALYKKGDSAEAEKIWETMI 240
           YGILVKSYCDAGSPEKA++I+REMEEN VEV AVTFTTI+NALYKKG+SAEAEKIW+ M+
Sbjct: 181 YGILVKSYCDAGSPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKMM 240

Query: 241 SKGCELDVGAYNVRLMHEHGGKPEHVQALIEEMANSGLKPDAISYNYLMTCYCKNGMFDE 300
           SKGCELDVGAYNVRLMHEHGGKPE VQA+IEEMANSGLKPDAISYNYLMTCYCKNGM DE
Sbjct: 241 SKGCELDVGAYNVRLMHEHGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMIDE 300

Query: 301 AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVKMNKIPDFNTLKYLVE 360
           A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SVKMNKIPDFNTLKYLVE
Sbjct: 301 AKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESVKMNKIPDFNTLKYLVE 360

Query: 361 GLVEKKMMREAKGLIRTIRKKFPPDTLKAWREVEEGVGLASA 401
           GLVEKKMMREAKGLIRT+RKKFPPDTLKAWREVEEGVGLASA
Sbjct: 361 GLVEKKMMREAKGLIRTVRKKFPPDTLKAWREVEEGVGLASA 402

[Close]
BLAST of CsaV3_4G005170 vs. NCBI nr
Match: XP_022985077.1 (pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 505.4 bits (1300), Expect = 1.9e-139
Identity = 275/363 (75.76%), Postives = 296/363 (81.54%), Query Frame = 0 

Query: 48  DPDKAVEIYSSVSSHYTSPVTSRYAQEITIRRLAKARRFKDIESLIESHKNDPKITQEPF 107
           DPDKA+ IYSSVSSHYTSPV+SRYAQEITIRRLAK+RRF DIESLIESHKNDPKITQEPF
Sbjct: 52  DPDKALNIYSSVSSHYTSPVSSRYAQEITIRRLAKSRRFDDIESLIESHKNDPKITQEPF 111

Query: 108 LSTLIRSYGRVGMFEHAMRTYNQMGDLGTPRSALSFNALLTACNNSKQFDKVPQLXXXXX 167
           LSTLIRSYGR GMFEHAMRTYNQM D GTPRSA+SFNALL A N+SKQFDKVPQLXXXXX
Sbjct: 112 LSTLIRSYGRAGMFEHAMRTYNQMEDFGTPRSAISFNALLCAFNHSKQFDKVPQLXXXXX 171

Query: 168 XXXXXXXXXXXYGILVKSYCDAGSPEKAMEIVREMEENGVEVNAVTFTTILNALYKKGDS 227
           XXXXXXXXXXXYGILVKSYC++GSPEKAM+IVREMEEN VEV AVTFTTIL+ALYKKG+S
Sbjct: 172 XXXXXXXXXXXYGILVKSYCESGSPEKAMQIVREMEENDVEVTAVTFTTILDALYKKGES 231

Query: 228 AEAEKIWETMISKGCELDVGAYNVRLMHEHGGKPEHVQALIEEMANSGLKPDAISYNYLM 287
            EAEKIW  MISKGCELDVGAYNVRLMHEHG KPEHV+ALIEEMANSG+KPD ISYNYLM
Sbjct: 232 EEAEKIWNKMISKGCELDVGAYNVRLMHEHGSKPEHVEALIEEMANSGMKPDTISYNYLM 291

Query: 288 TCYCKNGMFDEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVKMNKI 347
           TCYCKNGM DEA                                         SVK++KI
Sbjct: 292 TCYCKNGMIDEAKKVYDDMEINGCNKNAATFRTFMYYLCRNGDYEKGYMVFKESVKVHKI 351

Query: 348 PDFNTLKYLVEGLVEKKMMREAKGLIRTIRKKFPPDTLKAWREVEEGVGLASAGDDVSSK 407
           PD NT+KYLVEGL+EKK M+EAKGLIRTIRKKFPPD+LKAWR+VEE +GLAS        
Sbjct: 352 PDVNTVKYLVEGLMEKKKMKEAKGLIRTIRKKFPPDSLKAWRKVEEALGLASXXXXXXXX 411

Query: 408 DDD 411
           DD+
Sbjct: 412 DDE 414

[Close]
BLAST of CsaV3_4G005170 vs. NCBI nr
Match: XP_022929280.1 (scarecrow-like protein 4 [Cucurbita moschata])

HSP 1 Score: 501.9 bits (1291), Expect = 2.1e-138
Identity = 270/352 (76.70%), Postives = 292/352 (82.95%), Query Frame = 0 

Query: 48  DPDKAVEIYSSVSSHYTSPVTSRYAQEITIRRLAKARRFKDIESLIESHKNDPKITQEPF 107
           DPDKA+ IYSSVSSHYTSPV+SRYAQE+TIRRLAK+RRF DIESLIESHKNDPKITQEPF
Sbjct: 60  DPDKALNIYSSVSSHYTSPVSSRYAQELTIRRLAKSRRFDDIESLIESHKNDPKITQEPF 119

Query: 108 LSTLIRSYGRVGMFEHAMRTYNQMGDLGTPRSALSFNALLTACNNSKQFDKVPQLXXXXX 167
           LSTLIRSYG+ GMFEHAMRTYNQM D GTPRS +SFNALL A N+SKQFDKVPQLXXXXX
Sbjct: 120 LSTLIRSYGQAGMFEHAMRTYNQMEDFGTPRSVISFNALLCAFNHSKQFDKVPQLXXXXX 179

Query: 168 XXXXXXXXXXXYGILVKSYCDAGSPEKAMEIVREMEENGVEVNAVTFTTILNALYKKGDS 227
           XXXXXXXXXXXYGILVKSYC++GSPEKAM+IVREMEEN VEV AVTFTTIL+ALYKKG+S
Sbjct: 180 XXXXXXXXXXXYGILVKSYCESGSPEKAMQIVREMEENDVEVTAVTFTTILDALYKKGES 239

Query: 228 AEAEKIWETMISKGCELDVGAYNVRLMHEHGGKPEHVQALIEEMANSGLKPDAISYNYLM 287
            EAEKIW  MISKGCELDVGAYNVRLMHEHGGKPEHV+ALIEEMANSG+KPD ISYNYLM
Sbjct: 240 EEAEKIWNKMISKGCELDVGAYNVRLMHEHGGKPEHVEALIEEMANSGMKPDTISYNYLM 299

Query: 288 TCYCKNGMFDEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVKMNKI 347
           TCYCKNGM DEA                                         SVK++KI
Sbjct: 300 TCYCKNGMIDEAKKVYDDMEINGCNKNAATFRTFMYYLCRNGDYEKGYMVFKESVKVHKI 359

Query: 348 PDFNTLKYLVEGLVEKKMMREAKGLIRTIRKKFPPDTLKAWREVEEGVGLAS 400
           PD NT+KYLVEGL+EKK M+EAKGLIRTIRKKFPPD+LK WR+VEE +GLAS
Sbjct: 360 PDVNTVKYLVEGLMEKKKMKEAKGLIRTIRKKFPPDSLKTWRKVEEALGLAS 411

[Close]
BLAST of CsaV3_4G005170 vs. TAIR10
Match: AT4G36680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 366.3 bits (939), Expect = 2.5e-101
Identity = 195/357 (54.62%), Postives = 236/357 (66.11%), Query Frame = 0 

Query: 47  YDPDKAVEIYSSVSSHYTSPVTSRYAQEITIRRLAKARRFKDIESLIESHKNDPKITQEP 106
           +DPDKA++IY++VS H  SPV+SRYAQE+T+RRLAK RRF DIE+LIESHKNDPKI +EP
Sbjct: 44  HDPDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEP 103

Query: 107 FLSTLIRSYGRVGMFEHAMRTYNQMGDLGTPRSALSFNALLTACNNSKQFDKVPQL-XXX 166
           F STLIRSYG+  MF HAMRT+ QM   GTPRSA+SFNALL AC +SK FDKVPQL  XX
Sbjct: 104 FYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDXX 163

Query: 167 XXXXXXXXXXXXXYGILVKSYCDAGSPEKAMEIVREMEENGVEVNAVTFTTILNALYKKG 226
           XX           YGIL+KSYCD+G+PEKA+EI+R+M+  G+EV  + FTTIL++LYKKG
Sbjct: 164 XXRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKG 223

Query: 227 DSAEAEKIWETMISKGCELDVGAYNVRLMHEHGGKPEHVQALIEEMANSGLKPDAISYNY 286
           +   A+                AYNVR+M      PE V+ LIEEM++ GLKPD ISYNY
Sbjct: 224 ELEVADNXXXXXXXXXXXXXXAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNY 283

Query: 287 LMTCYCKNGMFDEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVKMN 346
           LMT YC+ GM DEA                                         SV M+
Sbjct: 284 LMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMH 343

Query: 347 KIPDFNTLKYLVEGLVEKKMMREAKGLIRTIRKKFPPDTLKAWREVEEGVGLASAGD 403
           KIPDFNTLK+LV GLVE K   +AKGLIRT++KKFPP  L AW+++EE +GL S  D
Sbjct: 344 KIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKKFPPSFLNAWKKLEEELGLYSKTD 400

[Close]
BLAST of CsaV3_4G005170 vs. TAIR10
Match: AT2G18520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 344.7 bits (883), Expect = 7.7e-95
Identity = 179/367 (48.77%), Postives = 234/367 (63.76%), Query Frame = 0 

Query: 48  DPDKAVEIYSSVSSHYTSPVTSRYAQEITIRRLAKARRFKDIESLIESHKNDPKITQEPF 107
           DPDKA+ IY SVS++ TSP++SRYA E+T++RLAK++RF DIE+LIESHKN+PKI  E F
Sbjct: 45  DPDKALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSDIEALIESHKNNPKIKTETF 104

Query: 108 LSTLIRSYGRVGMFEHAMRTYNQMGDLGTPRSALSFNALLTACNNSKQFDKVPQL-XXXX 167
           LSTLIRSYGR  MF+HAM+ + +M  LGTPR+ +SFNALL AC +S  F++VPQL     
Sbjct: 105 LSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFP 164

Query: 168 XXXXXXXXXXXXYGILVKSYCDAGSPEKAMEIVREMEENGVEVNAVTFTTILNALYKKGD 227
                       YG+L+KSYCD+G PEKAMEI+R+ME  GVEV  + FTTIL +LYK G 
Sbjct: 165 QRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGL 224

Query: 228 SAEAEKIWETMISKGCELDVGAYNVRLMHEHGGKPEHVQALIEEMANSGLKPDAISYNYL 287
             EAE +W  M++KGC+LD   YNVRLM+     PE V+ L+EEM++ GLKPD +SYNYL
Sbjct: 225 VDEAESLWIEMVNKGCDLDNTVYNVRLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYL 284

Query: 288 MTCYCKNGMFDEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVKMNK 347
           MT YC  GM  EA                                         S  ++K
Sbjct: 285 MTAYCVKGMMSEA----KKVYEGLEQPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHK 344

Query: 348 IPDFNTLKYLVEGLVEKKMMREAKGLIRTIRKKFPPDTLKAWREVEEGVGLASAGDDVSS 407
           IPDF T K+L EGLV+   M +A+G+ R ++KKFPP  +  W+++EE +GL S G+  + 
Sbjct: 345 IPDFKTCKHLTEGLVKNNRMEDARGVARIVKKKFPPRLVTEWKKLEEKLGLYSKGNAAAV 404

Query: 408 KDDDETR 414
               +TR
Sbjct: 405 SSSSQTR 407

[Close]
BLAST of CsaV3_4G005170 vs. TAIR10
Match: AT3G13160.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 100.9 bits (250), Expect = 1.9e-21
Identity = 50/130 (38.46%), Postives = 78/130 (60.00%), Query Frame = 0 

Query: 74  EITIRRLAKARRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRVGMFEHAMRTYNQMGD 133
           E T+RRLA A++F+ +E ++E     P +++E F++ +I  YGRVGMFE+A + +++M +
Sbjct: 75  ERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPE 134

Query: 134 LGTPRSALSFNALLTACNNSKQFDKVPQLXXXXXXXXXXXXXXXXYGILVKSYCDAGSPE 193
               R+ALSFNALL AC NSK+FD V  +                Y  L+K  C  GS  
Sbjct: 135 RNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFT 194

Query: 194 KAMEIVREME 204
           +A+ ++ E+E
Sbjct: 195 EAVALIDEIE 204

[Close]
BLAST of CsaV3_4G005170 vs. TAIR10
Match: AT1G80150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 97.4 bits (241), Expect = 2.1e-20
Identity = 57/191 (29.84%), Postives = 97/191 (50.79%), Query Frame = 0 

Query: 48  DPDKAVEIYSSVSSHYTSPVTSRYAQEITIRRLAKARRFKDIESLIESHKNDPKITQEPF 107
           DP+K   ++ + +++    + +R+A E T+ RLA A R   IE L+E  K  P+  +E F
Sbjct: 50  DPEKLYNLFKANATN-RLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGF 109

Query: 108 LSTLIRSYGRVGMFEHAMRTYNQMGDLGTPRSALSFNALLTACNNSKQFDKVPQLXXXXX 167
           +  +I  YG+ GM + A+ T+  M   G  RS  SFNA L   + +     + +      
Sbjct: 110 IVRIIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAP 169

Query: 168 XXXXXXXXXXXYGILVKSYCDAGSPEKAMEIVREMEENGVEVNAVTFTTILNALYKKGDS 227
                      + I +KS+C+ G  + A   +REME++G+  + VT+TT+++ALYK    
Sbjct: 170 SKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERC 229

Query: 228 AEAEKIWETMI 239
                +W  M+
Sbjct: 230 VIGNGLWNLMV 239

[Close]
BLAST of CsaV3_4G005170 vs. TAIR10
Match: AT1G55890.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 84.7 bits (208), Expect = 1.4e-16
Identity = 44/128 (34.38%), Postives = 71/128 (55.47%), Query Frame = 0 

Query: 76  TIRRLAKARRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRVGMFEHAMRTYNQMGDLG 135
           T+RRL  A+R   +E ++E  K    +++E F + +I  YG+ GMFE+A + + +M +  
Sbjct: 80  TVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRD 139

Query: 136 TPRSALSFNALLTACNNSKQFDKVPQLXXXXXXXXXXXXXXXXYGILVKSYCDAGSPEKA 195
             RS LSFNALL+A   SK+FD V +L                Y  L+K+ C+  S  +A
Sbjct: 140 CKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEA 199

Query: 196 MEIVREME 204
           + ++ E+E
Sbjct: 200 VALLDEIE 207

[Close]
BLAST of CsaV3_4G005170 vs. Swiss-Prot
Match: sp|Q9M065|PP352_ARATH (Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g36680 PE=1 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 4.5e-100
Identity = 195/357 (54.62%), Postives = 236/357 (66.11%), Query Frame = 0 

Query: 47  YDPDKAVEIYSSVSSHYTSPVTSRYAQEITIRRLAKARRFKDIESLIESHKNDPKITQEP 106
           +DPDKA++IY++VS H  SPV+SRYAQE+T+RRLAK RRF DIE+LIESHKNDPKI +EP
Sbjct: 44  HDPDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEP 103

Query: 107 FLSTLIRSYGRVGMFEHAMRTYNQMGDLGTPRSALSFNALLTACNNSKQFDKVPQL-XXX 166
           F STLIRSYG+  MF HAMRT+ QM   GTPRSA+SFNALL AC +SK FDKVPQL  XX
Sbjct: 104 FYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDXX 163

Query: 167 XXXXXXXXXXXXXYGILVKSYCDAGSPEKAMEIVREMEENGVEVNAVTFTTILNALYKKG 226
           XX           YGIL+KSYCD+G+PEKA+EI+R+M+  G+EV  + FTTIL++LYKKG
Sbjct: 164 XXRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKG 223

Query: 227 DSAEAEKIWETMISKGCELDVGAYNVRLMHEHGGKPEHVQALIEEMANSGLKPDAISYNY 286
           +   A+                AYNVR+M      PE V+ LIEEM++ GLKPD ISYNY
Sbjct: 224 ELEVADNXXXXXXXXXXXXXXAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNY 283

Query: 287 LMTCYCKNGMFDEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVKMN 346
           LMT YC+ GM DEA                                         SV M+
Sbjct: 284 LMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMH 343

Query: 347 KIPDFNTLKYLVEGLVEKKMMREAKGLIRTIRKKFPPDTLKAWREVEEGVGLASAGD 403
           KIPDFNTLK+LV GLVE K   +AKGLIRT++KKFPP  L AW+++EE +GL S  D
Sbjct: 344 KIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKKFPPSFLNAWKKLEEELGLYSKTD 400

[Close]
BLAST of CsaV3_4G005170 vs. Swiss-Prot
Match: sp|Q9ZU67|PP162_ARATH (Pentatricopeptide repeat-containing protein At2g18520, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g18520 PE=1 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 1.4e-93
Identity = 179/367 (48.77%), Postives = 234/367 (63.76%), Query Frame = 0 

Query: 48  DPDKAVEIYSSVSSHYTSPVTSRYAQEITIRRLAKARRFKDIESLIESHKNDPKITQEPF 107
           DPDKA+ IY SVS++ TSP++SRYA E+T++RLAK++RF DIE+LIESHKN+PKI  E F
Sbjct: 45  DPDKALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSDIEALIESHKNNPKIKTETF 104

Query: 108 LSTLIRSYGRVGMFEHAMRTYNQMGDLGTPRSALSFNALLTACNNSKQFDKVPQL-XXXX 167
           LSTLIRSYGR  MF+HAM+ + +M  LGTPR+ +SFNALL AC +S  F++VPQL     
Sbjct: 105 LSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFP 164

Query: 168 XXXXXXXXXXXXYGILVKSYCDAGSPEKAMEIVREMEENGVEVNAVTFTTILNALYKKGD 227
                       YG+L+KSYCD+G PEKAMEI+R+ME  GVEV  + FTTIL +LYK G 
Sbjct: 165 QRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGL 224

Query: 228 SAEAEKIWETMISKGCELDVGAYNVRLMHEHGGKPEHVQALIEEMANSGLKPDAISYNYL 287
             EAE +W  M++KGC+LD   YNVRLM+     PE V+ L+EEM++ GLKPD +SYNYL
Sbjct: 225 VDEAESLWIEMVNKGCDLDNTVYNVRLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYL 284

Query: 288 MTCYCKNGMFDEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVKMNK 347
           MT YC  GM  EA                                         S  ++K
Sbjct: 285 MTAYCVKGMMSEA----KKVYEGLEQPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHK 344

Query: 348 IPDFNTLKYLVEGLVEKKMMREAKGLIRTIRKKFPPDTLKAWREVEEGVGLASAGDDVSS 407
           IPDF T K+L EGLV+   M +A+G+ R ++KKFPP  +  W+++EE +GL S G+  + 
Sbjct: 345 IPDFKTCKHLTEGLVKNNRMEDARGVARIVKKKFPPRLVTEWKKLEEKLGLYSKGNAAAV 404

Query: 408 KDDDETR 414
               +TR
Sbjct: 405 SSSSQTR 407

[Close]
BLAST of CsaV3_4G005170 vs. Swiss-Prot
Match: sp|Q9LK57|PP226_ARATH (Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g13160 PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 3.5e-20
Identity = 50/130 (38.46%), Postives = 78/130 (60.00%), Query Frame = 0 

Query: 74  EITIRRLAKARRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRVGMFEHAMRTYNQMGD 133
           E T+RRLA A++F+ +E ++E     P +++E F++ +I  YGRVGMFE+A + +++M +
Sbjct: 75  ERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPE 134

Query: 134 LGTPRSALSFNALLTACNNSKQFDKVPQLXXXXXXXXXXXXXXXXYGILVKSYCDAGSPE 193
               R+ALSFNALL AC NSK+FD V  +                Y  L+K  C  GS  
Sbjct: 135 RNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFT 194

Query: 194 KAMEIVREME 204
           +A+ ++ E+E
Sbjct: 195 EAVALIDEIE 204

[Close]
BLAST of CsaV3_4G005170 vs. Swiss-Prot
Match: sp|Q8GW57|PP134_ARATH (Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g80150 PE=2 SV=2)

HSP 1 Score: 97.4 bits (241), Expect = 3.9e-19
Identity = 57/191 (29.84%), Postives = 97/191 (50.79%), Query Frame = 0 

Query: 48  DPDKAVEIYSSVSSHYTSPVTSRYAQEITIRRLAKARRFKDIESLIESHKNDPKITQEPF 107
           DP+K   ++ + +++    + +R+A E T+ RLA A R   IE L+E  K  P+  +E F
Sbjct: 50  DPEKLYNLFKANATN-RLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGF 109

Query: 108 LSTLIRSYGRVGMFEHAMRTYNQMGDLGTPRSALSFNALLTACNNSKQFDKVPQLXXXXX 167
           +  +I  YG+ GM + A+ T+  M   G  RS  SFNA L   + +     + +      
Sbjct: 110 IVRIIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAP 169

Query: 168 XXXXXXXXXXXYGILVKSYCDAGSPEKAMEIVREMEENGVEVNAVTFTTILNALYKKGDS 227
                      + I +KS+C+ G  + A   +REME++G+  + VT+TT+++ALYK    
Sbjct: 170 SKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERC 229

Query: 228 AEAEKIWETMI 239
                +W  M+
Sbjct: 230 VIGNGLWNLMV 239

[Close]
BLAST of CsaV3_4G005170 vs. Swiss-Prot
Match: sp|Q9LG23|PPR82_ARATH (Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g55890 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.6e-15
Identity = 44/128 (34.38%), Postives = 71/128 (55.47%), Query Frame = 0 

Query: 76  TIRRLAKARRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRVGMFEHAMRTYNQMGDLG 135
           T+RRL  A+R   +E ++E  K    +++E F + +I  YG+ GMFE+A + + +M +  
Sbjct: 80  TVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRD 139

Query: 136 TPRSALSFNALLTACNNSKQFDKVPQLXXXXXXXXXXXXXXXXYGILVKSYCDAGSPEKA 195
             RS LSFNALL+A   SK+FD V +L                Y  L+K+ C+  S  +A
Sbjct: 140 CKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEA 199

Query: 196 MEIVREME 204
           + ++ E+E
Sbjct: 200 VALLDEIE 207

[Close]
BLAST of CsaV3_4G005170 vs. TrEMBL
Match: tr|A0A0A0KXX6|A0A0A0KXX6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G038790 PE=4 SV=1)

HSP 1 Score: 604.0 bits (1556), Expect = 2.6e-169
Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 0 

Query: 47  YDPDKAVEIYSSVSSHYTSPVTSRYAQEITIRRLAKARRFKDIESLIESHKNDPKITQEP 106
           YDPDKAVEIYSSVSSHYTSPVTSRYAQEITIRRLAKARRFKDIESLIESHKNDPKITQEP
Sbjct: 78  YDPDKAVEIYSSVSSHYTSPVTSRYAQEITIRRLAKARRFKDIESLIESHKNDPKITQEP 137

Query: 107 FLSTLIRSYGRVGMFEHAMRTYNQMGDLGTPRSALSFNALLTACNNSKQFDKVPQLXXXX 166
           FLSTLIRSYGRVGMFEHAMRTYNQMGDLGTPRSALSFNALLTACNNSKQFDKVPQLXXXX
Sbjct: 138 FLSTLIRSYGRVGMFEHAMRTYNQMGDLGTPRSALSFNALLTACNNSKQFDKVPQLXXXX 197

Query: 167 XXXXXXXXXXXXYGILVKSYCDAGSPEKAMEIVREMEENGVEVNAVTFTTILNALYKKGD 226
           XXXXXXXXXXXXYGILVKSYCDAGSPEKAMEIVREMEENGVEVNAVTFTTILNALYKKGD
Sbjct: 198 XXXXXXXXXXXXYGILVKSYCDAGSPEKAMEIVREMEENGVEVNAVTFTTILNALYKKGD 257

Query: 227 SAEAEKIWETMISKGCELDVGAYNVRLMHEHGGKPEHVQALIEEMANSGLKPDAISYNYL 286
           SAEAEKIWETMISKGCELDVGAYNVRLMHEHGGKPEHVQALIEEMANSGLKPDAISYNYL
Sbjct: 258 SAEAEKIWETMISKGCELDVGAYNVRLMHEHGGKPEHVQALIEEMANSGLKPDAISYNYL 317

Query: 287 MTCYCKNGMFDEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVKMNK 346
           MTCYCKNGMFDEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVKMNK
Sbjct: 318 MTCYCKNGMFDEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVKMNK 377

Query: 347 IPDFNTLKYLVEGLVEKKMMREAKGLIRTIRKKFPPDTLKAWREVEEGVGLASAGDDVSS 406
           IPDFNTLKYLVEGLVEKKMMREAKGLIRTIRKKFPPDTLKAWREVEEGVGLASAGDDVSS
Sbjct: 378 IPDFNTLKYLVEGLVEKKMMREAKGLIRTIRKKFPPDTLKAWREVEEGVGLASAGDDVSS 437

Query: 407 KDDDETRT 415
           KDDDETRT
Sbjct: 438 KDDDETRT 445

[Close]
BLAST of CsaV3_4G005170 vs. TrEMBL
Match: tr|A0A1S3BX19|A0A1S3BX19_CUCME (pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494372 PE=4 SV=1)

HSP 1 Score: 563.9 bits (1452), Expect = 2.9e-157
Identity = 360/402 (89.55%), Postives = 373/402 (92.79%), Query Frame = 0 

Query: 1   MSFSISTRHHIRRLST--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDPDKAVEIYSS 60
           MSFSISTRHHIRRLST  XXXXXXXXXXXXXXXXXXXXXXXXXX    YDPDKA+EIYSS
Sbjct: 1   MSFSISTRHHIRRLSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRNEYDPDKALEIYSS 60

Query: 61  VSSHYTSPVTSRYAQEITIRRLAKARRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRV 120
           VSSHYTSPVTSRYAQEITIRRLAK+RRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRV
Sbjct: 61  VSSHYTSPVTSRYAQEITIRRLAKSRRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRV 120

Query: 121 GMFEHAMRTYNQMGDLGTPRSALSFNALLTACNNSKQFDKVPQLXXXXXXXXXXXXXXXX 180
           GMFEHAMRTYNQMGDLGTPRSALSFNALL+ACN+SKQFDKVPQL                
Sbjct: 121 GMFEHAMRTYNQMGDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRYNFSPNKIS 180

Query: 181 YGILVKSYCDAGSPEKAMEIVREMEENGVEVNAVTFTTILNALYKKGDSAEAEKIWETMI 240
           YGILVKSYCDAGSPEKA++I+REMEEN VEV AVTFTTI+NALYKKG+SAEAEKIW+ M+
Sbjct: 181 YGILVKSYCDAGSPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKMM 240

Query: 241 SKGCELDVGAYNVRLMHEHGGKPEHVQALIEEMANSGLKPDAISYNYLMTCYCKNGMFDE 300
           SKGCELDVGAYNVRLMHEHGGKPE VQA+IEEMANSGLKPDAISYNYLMTCYCKNGM DE
Sbjct: 241 SKGCELDVGAYNVRLMHEHGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMIDE 300

Query: 301 AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVKMNKIPDFNTLKYLVE 360
           A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SVKMNKIPDFNTLKYLVE
Sbjct: 301 AKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESVKMNKIPDFNTLKYLVE 360

Query: 361 GLVEKKMMREAKGLIRTIRKKFPPDTLKAWREVEEGVGLASA 401
           GLVEKKMMREAKGLIRT+RKKFPPDTLKAWREVEEGVGLASA
Sbjct: 361 GLVEKKMMREAKGLIRTVRKKFPPDTLKAWREVEEGVGLASA 402

[Close]
BLAST of CsaV3_4G005170 vs. TrEMBL
Match: tr|A0A251NBS6|A0A251NBS6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G151800 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 5.2e-122
Identity = 222/368 (60.33%), Postives = 270/368 (73.37%), Query Frame = 0 

Query: 47  YDPDKAVEIYSSVSSHYTSPVTSRYAQEITIRRLAKARRFKDIESLIESHKNDPKITQEP 106
           YDPDKA+EIYSSVS HY++P +SRYAQ++T+RRLAK+ RF DIE LIESHKNDPKITQEP
Sbjct: 34  YDPDKALEIYSSVSEHYSTPTSSRYAQDLTVRRLAKSHRFADIEKLIESHKNDPKITQEP 93

Query: 107 FLSTLIRSYGRVGMFEHAMRTYNQMGDLGTPRSALSFNALLTACNNSKQFDKVPQLXXXX 166
           FL TLIRSYGR GMF+HAMRT++QM  LGTPRS+LSFNALLTAC NSKQF+KVPQL    
Sbjct: 94  FLCTLIRSYGRSGMFDHAMRTFDQMDQLGTPRSSLSFNALLTACTNSKQFEKVPQLFDEI 153

Query: 167 XXXXXXXXXXXXYGILVKSYCDAGSPEKAMEIVREMEENGVEVNAVTFTTILNALYKKGD 226
                       YGIL+KSYC A  PEKA+E +R MEE G+E+ AVTFTTI NALYKKG+
Sbjct: 154 PNKHGVSPDKVSYGILIKSYCAADKPEKAIETLRLMEEKGIEITAVTFTTIFNALYKKGN 213

Query: 227 SAEAEKIWETMISKGCELDVGAYNVRLMHEHGGKPEHVQALIEEMANSGLKPDAISYNYL 286
             EAE +W  M+ KG E+D  AYNV++M+ HGG P++V+ALIEEMAN+GLKPD ISYNYL
Sbjct: 214 GEEAENLWNEMVKKGIEVDAAAYNVKIMYVHGGNPDNVKALIEEMANAGLKPDTISYNYL 273

Query: 287 MTCYCKNGMFDEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVKMNK 346
           MTCYC+N M +EA                                         SV+++K
Sbjct: 274 MTCYCRNEMMEEAVKVYEGLEGNACNPNAATFRTLIFYLCSSEDYDKAYKIFKRSVEVHK 333

Query: 347 IPDFNTLKYLVEGLVEKKMMREAKGLIRTIRKKFPPDTLKAWREVEEGVGLASAGDDVSS 406
           IPDFNT+++LVEGLV+KK M+EAKGLIRTI+KKFPP+ L AW++VEEG+GLAS+  + SS
Sbjct: 334 IPDFNTMRHLVEGLVKKKKMKEAKGLIRTIKKKFPPNLLVAWKKVEEGLGLASSDRNASS 393

Query: 407 -KDDDETR 414
             D+DE +
Sbjct: 394 VPDNDEAK 401

[Close]
BLAST of CsaV3_4G005170 vs. TrEMBL
Match: tr|A0A2I4F4B4|A0A2I4F4B4_9ROSI (pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Juglans regia OX=51240 GN=LOC108995377 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 9.3e-119
Identity = 220/365 (60.27%), Postives = 265/365 (72.60%), Query Frame = 0 

Query: 47  YDPDKAVEIYSSVSSHYTSPVTSRYAQEITIRRLAKARRFKDIESLIESHKNDPKITQEP 106
           YDPDKA+EIYSSVS +Y+SP +SRYAQ++T+RRLAK+ RF DIESLIESHK DPKI +EP
Sbjct: 35  YDPDKALEIYSSVSKNYSSPTSSRYAQDLTVRRLAKSHRFSDIESLIESHKKDPKIKEEP 94

Query: 107 FLSTLIRSYGRVGMFEHAMRTYNQMGDLGTPRSALSFNALLTACNNSKQFDKVPQLXXXX 166
           +LSTLIRSYGR GMF+HA+RT++QM DLGTPRSA+SFNALL+ACN+SK F+KVPQL    
Sbjct: 95  YLSTLIRSYGRAGMFDHALRTFDQMDDLGTPRSAVSFNALLSACNHSKMFNKVPQLFEEI 154

Query: 167 XXXXXXXXXXXXYGILVKSYCDAGSPEKAMEIVREMEENGVEVNAVTFTTILNALYKKGD 226
                       YGILVKSYC+AGSPE A+ I +EMEE GVE+ AVTFTTIL ALYK G 
Sbjct: 155 PRKYNVSPDKVSYGILVKSYCEAGSPETAVGIFKEMEEKGVEITAVTFTTILGALYKNGK 214

Query: 227 SAEAEKIWETMISKGCELDVGAYNVRLMHEHGGKPEHVQALIEEMANSGLKPDAISYNYL 286
           S EAEK W  M+ KGCE+DV AYNVR+M+ HGG+PE+V ALI EM+N+GLKPDAISYNYL
Sbjct: 215 SEEAEKYWNEMVKKGCEIDVAAYNVRIMYAHGGEPENVMALINEMSNAGLKPDAISYNYL 274

Query: 287 MTCYCKNGMFDEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVKMNK 346
           MTCY K+GM DEA                                         SVK++K
Sbjct: 275 MTCYLKSGMMDEAKAVYEGLEGNGCNPNAATFRTLIYYLCRNEDYEKGYKVFKESVKVHK 334

Query: 347 IPDFNTLKYLVEGLVEKKMMREAKGLIRTIRKKFPPDTLKAWREVEEGVGLASAGDDVSS 406
           IPDF T++ LVEGLV+KK M+ AKGLIRTI+KKFPP+ + AW +VE+ +GL+S   D  S
Sbjct: 335 IPDFVTMRNLVEGLVKKKKMKAAKGLIRTIKKKFPPNVVNAWTKVEKELGLSSV--DADS 394

Query: 407 KDDDE 412
            +D E
Sbjct: 395 VEDQE 397

[Close]
BLAST of CsaV3_4G005170 vs. TrEMBL
Match: tr|A0A2P5FXR2|A0A2P5FXR2_9ROSA (Tetratricopeptide-like helical domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_015540 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 1.3e-117
Identity = 265/365 (72.60%), Postives = 321/365 (87.95%), Query Frame = 0 

Query: 47  YDPDKAVEIYSSVSSHYTSPVTSRYAQEITIRRLAKARRFKDIESLIESHKNDPKITQEP 106
           +DPDKA+EIYSSVS HY+SP  SRYAQ++T+RRLAK+RRF DIE+LIESHK DPKI QE 
Sbjct: 34  HDPDKALEIYSSVSDHYSSPTISRYAQDLTVRRLAKSRRFGDIEALIESHKKDPKIKQES 93

Query: 107 FLSTLIRSYGRVGMFEHAMRTYNQMGDLGTPRSALSFNALLTACNNSKQFDKVPQLXXXX 166
           +LSTLIRSYGR GMF+HA+RT++QM  LGTPRS +SFN+LL+ACN SK FDKVP  XXXX
Sbjct: 94  YLSTLIRSYGRAGMFDHALRTFDQMDQLGTPRSVISFNSLLSACNQSKLFDKVPXXXXXX 153

Query: 167 XXXXXXXXXXXXYGILVKSYCDAGSPEKAMEIVREMEENGVEVNAVTFTTILNALYKKGD 226
           XXXXXXXXXX  YGILVK+YC+AGSP++A+EIV EME+NG+E+ AVT+TTI++ALYKKG 
Sbjct: 154 XXXXXXXXXXVSYGILVKAYCEAGSPQRAIEIVGEMEKNGLEITAVTYTTIVDALYKKGQ 213

Query: 227 SAEAEKIWETMISKGCELDVGAYNVRLMHEHGGKPEHVQALIEEMANSGLKPDAISYNYL 286
           + EAEK+W+TM+ KGCE+DV AYNVR+MH HGG+PE+V+ALI++M+++GLKPD ISYNYL
Sbjct: 214 AEEAEKLWKTMVDKGCEVDVAAYNVRIMHSHGGEPENVKALIDKMSDAGLKPDTISYNYL 273

Query: 287 MTCYCKNGMFDEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVKMNK 346
           MTCYC        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSV+++K
Sbjct: 274 MTCYCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVQVHK 333

Query: 347 IPDFNTLKYLVEGLVEKKMMREAKGLIRTIRKKFPPDTLKAWREVEEGVGLASAGDDVSS 406
           IPDFNTLK+LVEGLV+KK ++EAKG+IRT +KKFPP+ L +WR+VEE +GLASA  D  S
Sbjct: 334 IPDFNTLKHLVEGLVKKKKIKEAKGMIRTFKKKFPPNVLNSWRKVEESLGLASASSDTHS 393

Query: 407 KDDDE 412
             D++
Sbjct: 394 ASDED 398

The following BLAST results are available for this feature:
BLAST of CsaV3_4G005170 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53262.13.9e-169100.00hypothetical protein Csa_4G038790 [Cucumis sativus][more]
XP_011654338.12.5e-168100.00PREDICTED: pentatricopeptide repeat-containing protein At4g36680, mitochondrial-... [more]
XP_008453729.14.5e-15789.55PREDICTED: pentatricopeptide repeat-containing protein At4g36680, mitochondrial ... [more]
XP_022985077.11.9e-13975.76pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like [Cucur... [more]
XP_022929280.12.1e-13876.70scarecrow-like protein 4 [Cucurbita moschata][more]
BLAST of CsaV3_4G005170 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G36680.12.5e-10154.62Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G18520.17.7e-9548.77Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G13160.11.9e-2138.46Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G80150.12.1e-2029.84Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G55890.11.4e-1634.38Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of CsaV3_4G005170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9M065|PP352_ARATH4.5e-10054.62Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidop... [more]
sp|Q9ZU67|PP162_ARATH1.4e-9348.77Pentatricopeptide repeat-containing protein At2g18520, mitochondrial OS=Arabidop... [more]
sp|Q9LK57|PP226_ARATH3.5e-2038.46Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidop... [more]
sp|Q8GW57|PP134_ARATH3.9e-1929.84Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidop... [more]
sp|Q9LG23|PPR82_ARATH2.6e-1534.38Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidop... [more]
BLAST of CsaV3_4G005170 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KXX6|A0A0A0KXX6_CUCSA2.6e-169100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G038790 PE=4 SV=1[more]
tr|A0A1S3BX19|A0A1S3BX19_CUCME2.9e-15789.55pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Cucumis ... [more]
tr|A0A251NBS6|A0A251NBS6_PRUPE5.2e-12260.33Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G151800 PE=4 SV=1[more]
tr|A0A2I4F4B4|A0A2I4F4B4_9ROSI9.3e-11960.27pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Juglans ... [more]
tr|A0A2P5FXR2|A0A2P5FXR2_9ROSA1.3e-11772.60Tetratricopeptide-like helical domain containing protein OS=Trema orientalis OX=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006626 protein targeting to mitochondrion
cellular_component GO:0005575 cellular_component
cellular_component GO:0005622 intracellular
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G005170.1CsaV3_4G005170.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 109..135
e-value: 9.9E-4
score: 19.1
coord: 142..169
e-value: 0.009
score: 16.1
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 281..313
e-value: 2.3E-10
score: 38.0
coord: 317..349
e-value: 3.3E-5
score: 21.8
coord: 142..175
e-value: 1.5E-5
score: 22.8
coord: 212..246
e-value: 3.6E-7
score: 27.9
coord: 109..135
e-value: 5.0E-5
score: 21.2
coord: 177..211
e-value: 1.3E-8
score: 32.5
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 178..223
e-value: 7.4E-10
score: 38.7
coord: 278..327
e-value: 6.1E-14
score: 51.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 139..169
score: 8.429
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 210..244
score: 11.268
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 349..379
score: 5.908
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 279..313
score: 12.649
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 175..209
score: 12.167
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 314..348
score: 10.019
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 104..138
score: 8.21
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 254..411
e-value: 2.0E-28
score: 101.7
coord: 103..253
e-value: 2.5E-36
score: 127.6
NoneNo IPR availablePANTHERPTHR24015:SF506SUBFAMILY NOT NAMEDcoord: 4..373
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 4..373
NoneNo IPR availableSUPERFAMILYSSF81901HCP-likecoord: 186..377