CmoCh16G007100 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh16G007100
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Pentatricopeptide repeat-containing protein
Location	Cmo_Chr16 : 3546620 .. 3547855 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCTCCATCGCCACACGCCACATCCGTCGTCTATCGACGGCAGCCACCGCCACCGCCACCGCAACCGCTGCTGCCAAGGCCACAGCAACGACGTCCTCTTCAATATCCATTTCAAAAGCGAAATCTAAACTAAGAACAGAGTATGATCCAGATAAAGCTCTGAACATTTACTCTTCTGTTTCCAGTCACTACACTTCCCCTGTCTCCTCTCGCTATGCTCAGGAACTCACTATTCGGCGCCTTGCAAAGTCTCGTCGATTCGATGACATTGAATCCCTGATCGAATCCCATAAAAATGACCCAAAGATCACTCAGGAGCCCTTTTTGTCCACCTTGATTCGATCCTACGGTCAAGCTGGTATGTTCGAGCACGCTATGAGGACTTATAATCAGATGGAAGATTTCGGCACTCCTCGATCGGTGATTTCCTTCAATGCGCTATTGTGTGCATTTAACCATTCGAAGCAATTCGACAAAGTTCCTCAACTGTTCGATGAAATTCCGAAGAAATACAATTTCTCTCCCAATAAGATCTCGTACGGGATCCTGGTCAAATCCTATTGCGAATCCGGTTCTCCTGAGAAGGCCATGCAAATTGTAAGGGAAATGGAGGAAAACGATGTGGAGGTTACTGCGGTGACATTCACAACCATTTTAGATGCTCTGTACAAGAAGGGTGAGAGCGAAGAGGCAGAGAAAATCTGGAACAAGATGATATCAAAAGGGTGTGAACTCGATGTAGGGGCCTATAACGTAAGATTGATGCACGAGCACGGCGGCAAGCCAGAACACGTTGAAGCATTGATCGAGGAAATGGCTAATTCAGGTATGAAACCCGACACCATTAGCTATAATTACTTAATGACTTGTTATTGCAAGAATGGGATGATTGATGAAGCAAAGAAGGTGTATGATGATATGGAGATAAATGGGTGTAACAAGAACGCTGCAACTTTTAGGACATTTATGTATTACCTCTGTAGAAATGGAGATTATGAAAAAGGGTATATGGTTTTCAAGGAGAGTGTGAAGGTTCATAAGATTCCTGATGTTAACACAGTGAAGTATTTGGTGGAGGGGCTAATGGAGAAGAAGAAGATGAAAGAGGCCAAGGGTTTAATCAGGACCATAAGGAAGAAGTTCCCTCCTGATTCTTTGAAGACCTGGAGAAAAGTTGAGGAGGCTCTTGGTTTGGCTTCTTCTTCTAAGGCTGATGATGAAACTGAAGAATAA

mRNA sequence

ATGTCCTCCATCGCCACACGCCACATCCGTCGTCTATCGACGGCAGCCACCGCCACCGCCACCGCAACCGCTGCTGCCAAGGCCACAGCAACGACGTCCTCTTCAATATCCATTTCAAAAGCGAAATCTAAACTAAGAACAGAGTATGATCCAGATAAAGCTCTGAACATTTACTCTTCTGTTTCCAGTCACTACACTTCCCCTGTCTCCTCTCGCTATGCTCAGGAACTCACTATTCGGCGCCTTGCAAAGTCTCGTCGATTCGATGACATTGAATCCCTGATCGAATCCCATAAAAATGACCCAAAGATCACTCAGGAGCCCTTTTTGTCCACCTTGATTCGATCCTACGGTCAAGCTGGTATGTTCGAGCACGCTATGAGGACTTATAATCAGATGGAAGATTTCGGCACTCCTCGATCGGTGATTTCCTTCAATGCGCTATTGTGTGCATTTAACCATTCGAAGCAATTCGACAAAGTTCCTCAACTGTTCGATGAAATTCCGAAGAAATACAATTTCTCTCCCAATAAGATCTCGTACGGGATCCTGGTCAAATCCTATTGCGAATCCGGTTCTCCTGAGAAGGCCATGCAAATTGTAAGGGAAATGGAGGAAAACGATGTGGAGGTTACTGCGGTGACATTCACAACCATTTTAGATGCTCTGTACAAGAAGGGTGAGAGCGAAGAGGCAGAGAAAATCTGGAACAAGATGATATCAAAAGGGTGTGAACTCGATGTAGGGGCCTATAACGTAAGATTGATGCACGAGCACGGCGGCAAGCCAGAACACGTTGAAGCATTGATCGAGGAAATGGCTAATTCAGGTATGAAACCCGACACCATTAGCTATAATTACTTAATGACTTGTTATTGCAAGAATGGGATGATTGATGAAGCAAAGAAGGTGTATGATGATATGGAGATAAATGGGTGTAACAAGAACGCTGCAACTTTTAGGACATTTATGTATTACCTCTGTAGAAATGGAGATTATGAAAAAGGGTATATGGTTTTCAAGGAGAGTGTGAAGGTTCATAAGATTCCTGATGTTAACACAGTGAAGTATTTGGTGGAGGGGCTAATGGAGAAGAAGAAGATGAAAGAGGCCAAGGGTTTAATCAGGACCATAAGGAAGAAGTTCCCTCCTGATTCTTTGAAGACCTGGAGAAAAGTTGAGGAGGCTCTTGGTTTGGCTTCTTCTTCTAAGGCTGATGATGAAACTGAAGAATAA

Coding sequence (CDS)

ATGTCCTCCATCGCCACACGCCACATCCGTCGTCTATCGACGGCAGCCACCGCCACCGCCACCGCAACCGCTGCTGCCAAGGCCACAGCAACGACGTCCTCTTCAATATCCATTTCAAAAGCGAAATCTAAACTAAGAACAGAGTATGATCCAGATAAAGCTCTGAACATTTACTCTTCTGTTTCCAGTCACTACACTTCCCCTGTCTCCTCTCGCTATGCTCAGGAACTCACTATTCGGCGCCTTGCAAAGTCTCGTCGATTCGATGACATTGAATCCCTGATCGAATCCCATAAAAATGACCCAAAGATCACTCAGGAGCCCTTTTTGTCCACCTTGATTCGATCCTACGGTCAAGCTGGTATGTTCGAGCACGCTATGAGGACTTATAATCAGATGGAAGATTTCGGCACTCCTCGATCGGTGATTTCCTTCAATGCGCTATTGTGTGCATTTAACCATTCGAAGCAATTCGACAAAGTTCCTCAACTGTTCGATGAAATTCCGAAGAAATACAATTTCTCTCCCAATAAGATCTCGTACGGGATCCTGGTCAAATCCTATTGCGAATCCGGTTCTCCTGAGAAGGCCATGCAAATTGTAAGGGAAATGGAGGAAAACGATGTGGAGGTTACTGCGGTGACATTCACAACCATTTTAGATGCTCTGTACAAGAAGGGTGAGAGCGAAGAGGCAGAGAAAATCTGGAACAAGATGATATCAAAAGGGTGTGAACTCGATGTAGGGGCCTATAACGTAAGATTGATGCACGAGCACGGCGGCAAGCCAGAACACGTTGAAGCATTGATCGAGGAAATGGCTAATTCAGGTATGAAACCCGACACCATTAGCTATAATTACTTAATGACTTGTTATTGCAAGAATGGGATGATTGATGAAGCAAAGAAGGTGTATGATGATATGGAGATAAATGGGTGTAACAAGAACGCTGCAACTTTTAGGACATTTATGTATTACCTCTGTAGAAATGGAGATTATGAAAAAGGGTATATGGTTTTCAAGGAGAGTGTGAAGGTTCATAAGATTCCTGATGTTAACACAGTGAAGTATTTGGTGGAGGGGCTAATGGAGAAGAAGAAGATGAAAGAGGCCAAGGGTTTAATCAGGACCATAAGGAAGAAGTTCCCTCCTGATTCTTTGAAGACCTGGAGAAAAGTTGAGGAGGCTCTTGGTTTGGCTTCTTCTTCTAAGGCTGATGATGAAACTGAAGAATAA

Homology

[Close]

BLAST of CmoCh16G007100 vs. Swiss-Prot
Match: PP352_ARATH (Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidopsis thaliana GN=At4g36680 PE=2 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 5.4e-143
Identity = 258/405 (63.70%), Postives = 318/405 (78.52%), Query Frame = 1


Query: 2   SSIATRHIRRLSTAATATATATAAAKATATTSSSISISKAKSKLRTEYDPDKALNIYSSV 61
           S I+ R +RR ++AA    T       TA +S  IS+SKAKS LR E+DPDKAL IY++V
Sbjct: 4   SRISLRLVRRFASAAADGTT-------TAPSSGKISVSKAKSTLRKEHDPDKALKIYANV 63

Query: 62  SSHYTSPVSSRYAQELTIRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGQAG 121
           S H  SPVSSRYAQELT+RRLAK RRF DIE+LIESHKNDPKI +EPF STLIRSYGQA 
Sbjct: 64  SDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQAS 123

Query: 122 MFEHAMRTYNQMEDFGTPRSVISFNALLCAFNHSKQFDKVPQLFDEIPKKYN-FSPNKIS 181
           MF HAMRT+ QM+ +GTPRS +SFNALL A  HSK FDKVPQLFDEIP++YN   P+KIS
Sbjct: 124 MFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKIS 183

Query: 182 YGILVKSYCESGSPEKAMQIVREMEENDVEVTAVTFTTILDALYKKGESEEAEKIWNKMI 241
           YGIL+KSYC+SG+PEKA++I+R+M+   +EVT + FTTIL +LYKKGE E A+ +WN+M+
Sbjct: 184 YGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMV 243

Query: 242 SKGCELDVGAYNVRLMHEHGGKPEHVEALIEEMANSGMKPDTISYNYLMTCYCKNGMIDE 301
            KGCELD  AYNVR+M      PE V+ LIEEM++ G+KPDTISYNYLMT YC+ GM+DE
Sbjct: 244 KKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDE 303

Query: 302 AKKVYDDMEINGCNKNAATFRTFMYYLCRNGDYEKGYMVFKESVKVHKIPDVNTVKYLVE 361
           AKKVY+ +E N C  NAATFRT +++LC +  YE+GY +FK+SV +HKIPD NT+K+LV 
Sbjct: 304 AKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVV 363

Query: 362 GLMEKKKMKEAKGLIRTIRKKFPPDSLKTWRKVEEALGLASSSKA 406
           GL+E KK  +AKGLIRT++KKFPP  L  W+K+EE LGL S + A
Sbjct: 364 GLVENKKRDDAKGLIRTVKKKFPPSFLNAWKKLEEELGLYSKTDA 401

[Close]

BLAST of CmoCh16G007100 vs. Swiss-Prot
Match: PP162_ARATH (Pentatricopeptide repeat-containing protein At2g18520, mitochondrial OS=Arabidopsis thaliana GN=At2g18520 PE=2 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 3.3e-124
Identity = 232/405 (57.28%), Postives = 302/405 (74.57%), Query Frame = 1


Query: 2   SSIATRHIRRLSTAATATATATAAAKATATTSSSISISKAKSKLRTEYDPDKALNIYSSV 61
           S +  R +RR STA    +  TA   A       I++SKAKSKLR   DPDKAL IY SV
Sbjct: 4   SRLYLRFLRRFSTATGIDSQTTAYPGA-------ITMSKAKSKLRKVQDPDKALAIYKSV 63

Query: 62  SSHYTSPVSSRYAQELTIRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGQAG 121
           S++ TSP+SSRYA ELT++RLAKS+RF DIE+LIESHKN+PKI  E FLSTLIRSYG+A 
Sbjct: 64  SNNSTSPLSSRYAMELTVQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRAS 123

Query: 122 MFEHAMRTYNQMEDFGTPRSVISFNALLCAFNHSKQFDKVPQLFDEIPKKY-NFSPNKIS 181
           MF+HAM+ + +M+  GTPR+V+SFNALL A  HS  F++VPQLFDE P++Y N +P+KIS
Sbjct: 124 MFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKIS 183

Query: 182 YGILVKSYCESGSPEKAMQIVREMEENDVEVTAVTFTTILDALYKKGESEEAEKIWNKMI 241
           YG+L+KSYC+SG PEKAM+I+R+ME   VEVT + FTTIL +LYK G  +EAE +W +M+
Sbjct: 184 YGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMV 243

Query: 242 SKGCELDVGAYNVRLMHEHGGKPEHVEALIEEMANSGMKPDTISYNYLMTCYCKNGMIDE 301
           +KGC+LD   YNVRLM+     PE V+ L+EEM++ G+KPDT+SYNYLMT YC  GM+ E
Sbjct: 244 NKGCDLDNTVYNVRLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSE 303

Query: 302 AKKVYDDMEINGCNKNAATFRTFMYYLCRNGDYEKGYMVFKESVKVHKIPDVNTVKYLVE 361
           AKKVY+ +E      NAATFRT +++LC NG Y++G  VFK+S  VHKIPD  T K+L E
Sbjct: 304 AKKVYEGLE----QPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTE 363

Query: 362 GLMEKKKMKEAKGLIRTIRKKFPPDSLKTWRKVEEALGLASSSKA 406
           GL++  +M++A+G+ R ++KKFPP  +  W+K+EE LGL S   A
Sbjct: 364 GLVKNNRMEDARGVARIVKKKFPPRLVTEWKKLEEKLGLYSKGNA 397

[Close]

BLAST of CmoCh16G007100 vs. Swiss-Prot
Match: PPR87_ARATH (Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidopsis thaliana GN=PPR336 PE=2 SV=2)

HSP 1 Score: 200.3 bits (508), Expect = 4.1e-50
Identity = 126/395 (31.90%), Postives = 218/395 (55.19%), Query Frame = 1


Query: 5   ATRHIRRLSTAATATATATAAAKATATTSSSISISKAKSKLRTEYDPDKALNIYSSVSSH 64
           A+  IR LS+A+T  +  +     T  TS   S   A S L++E DPD+ L I  + S  
Sbjct: 19  ASPQIRSLSSASTILSPDSK----TPLTSKEKS-KAALSLLKSEKDPDRILEICRAASLT 78

Query: 65  YTSPVSSRYAQELTIRRLAKSRRFDDIESLIESH-KNDPKITQEPFLSTLIRSYGQAGMF 124
               +  R A    +  LA+ + F  + +L++   +N P +  E F +  I  Y QA M 
Sbjct: 79  PDCRID-RIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANML 138

Query: 125 EHAMRTYNQMEDFGTPRSVISFNALLCAFNHSKQFDKVPQLFDEIPKKYNFSPNKISYGI 184
           +H++R +  +E F   R+V S NALL A   +K + +  +++ E+PK Y   P+  +Y  
Sbjct: 139 DHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNR 198

Query: 185 LVKSYCESGSPEKAMQIVREMEENDVEVTAVTFTTILDALYKKGESEEAEKIWNKMISKG 244
           ++K +CESGS   +  IV EME   ++  + +F  ++   Y + +S+E  K+   M  +G
Sbjct: 199 MIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRG 258

Query: 245 CELDVGAYNVRLMHE-HGGKPEHVEALIEEMANSGMKPDTISYNYLMTCYCKNGMIDEAK 304
             + V  YN+R+       K +  +AL++ M ++GMKP+T++Y++L+  +C     +EAK
Sbjct: 259 VNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAK 318

Query: 305 KVYDDMEINGCNKNAATFRTFMYYLCRNGDYEKGYMVFKESVKVHKIPDVNTVKYLVEGL 364
           K++  M   GC  ++  + T +YYLC+ GD+E    + KES++ + +P  + +K LV GL
Sbjct: 319 KLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGL 378

Query: 365 MEKKKMKEAKGLIRTIRKKFPPDSLKTWRKVEEAL 398
            +  K++EAK LI  +++KF   +++ W +VE AL
Sbjct: 379 AKDSKVEEAKELIGQVKEKF-TRNVELWNEVEAAL 406

[Close]

BLAST of CmoCh16G007100 vs. Swiss-Prot
Match: PPR82_ARATH (Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidopsis thaliana GN=At1g55890 PE=2 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.5e-49
Identity = 119/371 (32.08%), Postives = 208/371 (56.06%), Query Frame = 1


Query: 9   IRRLSTAATATATATAAAKATATTSSSISISKAKSKLRTEYDPDKALNIYSSV--SSHYT 68
           IRR S+AAT  +  TA   A +    S++     S +  E +P + +  +     S  + 
Sbjct: 17  IRRFSSAATVVSEPTAVTAAISPPQKSLT-----SLVNGERNPKRIVEKFKKACESERFR 76

Query: 69  SPVSSRYAQELTIRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGQAGMFEHA 128
           + ++     + T+RRL  ++R   +E ++E  K    +++E F + +I  YG+AGMFE+A
Sbjct: 77  TNIA---VYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENA 136

Query: 129 MRTYNQMEDFGTPRSVISFNALLCAFNHSKQFDKVPQLFDEIPKKYNFSPNKISYGILVK 188
            + + +M +    RSV+SFNALL A+  SK+FD V +LF+E+P K +  P+ +SY  L+K
Sbjct: 137 QKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIK 196

Query: 189 SYCESGSPEKAMQIVREMEENDVEVTAVTFTTILDALYKKGESEEAEKIWNKMISKGCEL 248
           + CE  S  +A+ ++ E+E   ++   VTF T+L + Y KG+ E  E+IW KM+ K   +
Sbjct: 197 ALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAI 256

Query: 249 DVGAYNVRLMH-EHGGKPEHVEALIEEMANSGMKPDTISYNYLMTCYCKNGMIDEAKKVY 308
           D+  YN RL+   +  K + +  L  E+  SG+KPD  S+N ++      G +DEA+  Y
Sbjct: 257 DIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWY 316

Query: 309 DDMEINGCNKNAATFRTFMYYLCRNGDYEKGYMVFKESVKVHKIPDVNTVKYLVEGLMEK 368
            ++  +G   + ATF   +  +C+ GD+E    +FKE+     +    T++ LV+ L++ 
Sbjct: 317 KEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKG 376

Query: 369 KKMKEAKGLIR 377
            K +EA+ +++
Sbjct: 377 SKREEAEEIVK 379

[Close]

BLAST of CmoCh16G007100 vs. Swiss-Prot
Match: PP226_ARATH (Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidopsis thaliana GN=At3g13160 PE=2 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 8.6e-48
Identity = 96/301 (31.89%), Postives = 173/301 (57.48%), Query Frame = 1


Query: 76  ELTIRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGQAGMFEHAMRTYNQMED 135
           E T+RRLA +++F+ +E ++E     P +++E F++ +I  YG+ GMFE+A + +++M +
Sbjct: 75  ERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPE 134

Query: 136 FGTPRSVISFNALLCAFNHSKQFDKVPQLFDEIPKKYNFSPNKISYGILVKSYCESGSPE 195
               R+ +SFNALL A  +SK+FD V  +F E+P K +  P+  SY  L+K  C  GS  
Sbjct: 135 RNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFT 194

Query: 196 KAMQIVREMEENDVEVTAVTFTTILDALYKKGESEEAEKIWNKMISKGCELDVGAYNVRL 255
           +A+ ++ E+E   ++   +TF  +L   Y KG+ EE E+IW +M+ K  + D+ +YN RL
Sbjct: 195 EAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARL 254

Query: 256 MH-EHGGKPEHVEALIEEMANSGMKPDTISYNYLMTCYCKNGMIDEAKKVYDDMEINGCN 315
           +      K E + +L +++  + +KPD  ++  ++  +   G +DEA   Y ++E NGC 
Sbjct: 255 LGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCR 314

Query: 316 KNAATFRTFMYYLCRNGDYEKGYMVFKESVKVHKIPDVNTVKYLVEGLMEKKKMKEAKGL 375
                F + +  +C+ GD E  Y + KE      + D   ++ +V+ L++  K  EA+ +
Sbjct: 315 PLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEI 374

[Close]

BLAST of CmoCh16G007100 vs. TrEMBL
Match: A0A0A0KXX6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G038790 PE=4 SV=1)

HSP 1 Score: 645.6 bits (1664), Expect = 4.1e-182
Identity = 321/384 (83.59%), Postives = 352/384 (91.67%), Query Frame = 1


Query: 31  TTSSSISISKAKSKLRTEYDPDKALNIYSSVSSHYTSPVSSRYAQELTIRRLAKSRRFDD 90
           T S+S+S   +KSKLRTEYDPDKA+ IYSSVSSHYTSPV+SRYAQE+TIRRLAK+RRF D
Sbjct: 63  TPSTSVS---SKSKLRTEYDPDKAVEIYSSVSSHYTSPVTSRYAQEITIRRLAKARRFKD 122

Query: 91  IESLIESHKNDPKITQEPFLSTLIRSYGQAGMFEHAMRTYNQMEDFGTPRSVISFNALLC 150
           IESLIESHKNDPKITQEPFLSTLIRSYG+ GMFEHAMRTYNQM D GTPRS +SFNALL 
Sbjct: 123 IESLIESHKNDPKITQEPFLSTLIRSYGRVGMFEHAMRTYNQMGDLGTPRSALSFNALLT 182

Query: 151 AFNHSKQFDKVPQLFDEIPKKYNFSPNKISYGILVKSYCESGSPEKAMQIVREMEENDVE 210
           A N+SKQFDKVPQLFDE+PK+YNFSPNK SYGILVKSYC++GSPEKAM+IVREMEEN VE
Sbjct: 183 ACNNSKQFDKVPQLFDEMPKRYNFSPNKFSYGILVKSYCDAGSPEKAMEIVREMEENGVE 242

Query: 211 VTAVTFTTILDALYKKGESEEAEKIWNKMISKGCELDVGAYNVRLMHEHGGKPEHVEALI 270
           V AVTFTTIL+ALYKKG+S EAEKIW  MISKGCELDVGAYNVRLMHEHGGKPEHV+ALI
Sbjct: 243 VNAVTFTTILNALYKKGDSAEAEKIWETMISKGCELDVGAYNVRLMHEHGGKPEHVQALI 302

Query: 271 EEMANSGMKPDTISYNYLMTCYCKNGMIDEAKKVYDDMEINGCNKNAATFRTFMYYLCRN 330
           EEMANSG+KPD ISYNYLMTCYCKNGM DEAKKVY+DMEINGCNKNAATFRT +Y+LCRN
Sbjct: 303 EEMANSGLKPDAISYNYLMTCYCKNGMFDEAKKVYNDMEINGCNKNAATFRTLIYHLCRN 362

Query: 331 GDYEKGYMVFKESVKVHKIPDVNTVKYLVEGLMEKKKMKEAKGLIRTIRKKFPPDSLKTW 390
           G+YEKGY VFKESVK++KIPD NT+KYLVEGL+EKK M+EAKGLIRTIRKKFPPD+LK W
Sbjct: 363 GEYEKGYKVFKESVKMNKIPDFNTLKYLVEGLVEKKMMREAKGLIRTIRKKFPPDTLKAW 422

Query: 391 RKVEEALGLAS-----SSKADDET 410
           R+VEE +GLAS     SSK DDET
Sbjct: 423 REVEEGVGLASAGDDVSSKDDDET 443

[Close]

BLAST of CmoCh16G007100 vs. TrEMBL
Match: A0A061DFV5_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein OS=Theobroma cacao GN=TCM_000426 PE=4 SV=1)

HSP 1 Score: 572.0 bits (1473), Expect = 5.8e-160
Identity = 285/411 (69.34%), Postives = 346/411 (84.18%), Query Frame = 1


Query: 2   SSIATRHIRRLSTAATATATATAAAKATATTSSSISISKAKSKLRTEYDPDKALNIYSSV 61
           SSI  RH+R LST  T          ATA++S SISIS+AK+KLRTEYDPDKAL IYSSV
Sbjct: 3   SSIPLRHLRHLSTTTTTA--------ATASSSISISISQAKNKLRTEYDPDKALEIYSSV 62

Query: 62  SSHYTSPVSSRYAQELTIRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGQAG 121
           S HY+SP SSRYAQ+LT+RRLAKSRRF DIESLIESHK DPKITQEPFLSTLIRSYG AG
Sbjct: 63  SKHYSSPSSSRYAQDLTVRRLAKSRRFSDIESLIESHKTDPKITQEPFLSTLIRSYGIAG 122

Query: 122 MFEHAMRTYNQMEDFGTPRSVISFNALLCAFNHSKQFDKVPQLFDEIPKKY-NFSPNKIS 181
           M +HA++T++QM+ FGTPRS ISFN+LL A NHS+QFDKVPQLF+EIPKKY + SP+K+S
Sbjct: 123 MLDHAIKTFDQMDQFGTPRSTISFNSLLSAGNHSRQFDKVPQLFEEIPKKYGSVSPDKVS 182

Query: 182 YGILVKSYCESGSPEKAMQIVREMEENDVEVTAVTFTTILDALYKKGESEEAEKIWNKMI 241
           YGIL+KSYCE+G P+K ++++REME   VEVTAVTFTTIL+ALYKKG++EEAEK+W+ M+
Sbjct: 183 YGILIKSYCEAGHPDKGIEVLREMERKSVEVTAVTFTTILNALYKKGKTEEAEKLWSDMM 242

Query: 242 SKGCELDVGAYNVRLMHEHGGKPEHVEALIEEMANSGMKPDTISYNYLMTCYCKNGMIDE 301
             GCELDV +YNVR+M+  GG PE V+ LI+EM+  G+KPDTISYNYLMTCYCKNGM+DE
Sbjct: 243 KNGCELDVASYNVRIMNLQGGDPEKVKELIDEMSTMGLKPDTISYNYLMTCYCKNGMLDE 302

Query: 302 AKKVYDDMEINGCNKNAATFRTFMYYLCRNGDYEKGYMVFKESVKVHKIPDVNTVKYLVE 361
           AKKVY+ +E NGCN NAATFRT ++YLC NG +E+GY VFKESV++HKIPD NT+K+LVE
Sbjct: 303 AKKVYEGLEGNGCNPNAATFRTLVFYLCLNGLHEQGYKVFKESVRLHKIPDFNTLKHLVE 362

Query: 362 GLMEKKKMKEAKGLIRTIRKKFPPDSLKTWRKVEEALGLASSSKADDETEE 412
           GL++ KK+KEAKGLIRT++KKFPP+ L  W+K+EE LGL S +    E +E
Sbjct: 363 GLVKNKKIKEAKGLIRTVKKKFPPNFLNAWKKLEEELGLVSGNAGGGEAQE 405

[Close]

BLAST of CmoCh16G007100 vs. TrEMBL
Match: A0A0D2PQ35_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G068700 PE=4 SV=1)

HSP 1 Score: 560.1 bits (1442), Expect = 2.3e-156
Identity = 283/411 (68.86%), Postives = 341/411 (82.97%), Query Frame = 1


Query: 2   SSIATRHIRRLSTAATATATATAAAKATATTSSSISISKAKSKLRTEYDPDKALNIYSSV 61
           SSI  RH+R  S        AT+ A A A  SSSIS+S+AKSKLRTEYDPDKAL IYSSV
Sbjct: 3   SSIRLRHLRHFS--------ATSNAAAAAAYSSSISVSQAKSKLRTEYDPDKALEIYSSV 62

Query: 62  SSHYTSPVSSRYAQELTIRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGQAG 121
           S HY+SP SSRYAQ+LT+RRLAKSRRF DIESLIESHK DPKI+QEPFLSTLIRSYG AG
Sbjct: 63  SKHYSSPSSSRYAQDLTVRRLAKSRRFSDIESLIESHKTDPKISQEPFLSTLIRSYGIAG 122

Query: 122 MFEHAMRTYNQMEDFGTPRSVISFNALLCAFNHSKQFDKVPQLFDEIPKKY-NFSPNKIS 181
           M +HA++T++QM+ FGTPRS ISFNALL A N S+QFD+VPQLFDEIPKKY   SP+K+S
Sbjct: 123 MLDHAIKTFHQMDQFGTPRSTISFNALLSACNQSRQFDRVPQLFDEIPKKYIGLSPDKVS 182

Query: 182 YGILVKSYCESGSPEKAMQIVREMEENDVEVTAVTFTTILDALYKKGESEEAEKIWNKMI 241
           YGILVKSYCE+G PEK ++++REME   VEVTAVT TTIL+ALYKKG++EEAEK+W +M+
Sbjct: 183 YGILVKSYCEAGHPEKGLEVLREMERKSVEVTAVTSTTILNALYKKGKTEEAEKLWFEMM 242

Query: 242 SKGCELDVGAYNVRLMHEHGGKPEHVEALIEEMANSGMKPDTISYNYLMTCYCKNGMIDE 301
             GCELDV +YNVR+ +  GG+PE V+ LI++M+  G+KPDTISYNYLMTCYCK GM+DE
Sbjct: 243 KTGCELDVASYNVRISNFQGGEPEKVKELIDDMSTLGLKPDTISYNYLMTCYCKRGMLDE 302

Query: 302 AKKVYDDMEINGCNKNAATFRTFMYYLCRNGDYEKGYMVFKESVKVHKIPDVNTVKYLVE 361
           AKKVY+ +E NGCN NAATFRT ++YLC NG YE+GY VFKESV++HKIPD NT+K+LVE
Sbjct: 303 AKKVYEGLEGNGCNPNAATFRTLVFYLCLNGLYEQGYKVFKESVRLHKIPDFNTLKHLVE 362

Query: 362 GLMEKKKMKEAKGLIRTIRKKFPPDSLKTWRKVEEALGLASSSKADDETEE 412
           GL+ KKK+K+AKGLIRT++K FPP+ LK W+K+EE LGL S +    E +E
Sbjct: 363 GLVMKKKIKDAKGLIRTVKKTFPPNFLKAWKKLEEELGLVSGNAEAREAKE 405

[Close]

BLAST of CmoCh16G007100 vs. TrEMBL
Match: A5BUJ7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032192 PE=4 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 1.1e-153
Identity = 278/407 (68.30%), Postives = 344/407 (84.52%), Query Frame = 1


Query: 7   RHIRRLSTAATATATATAAAKATATTSSSISISKAKSKLRTEYDPDKALNIYSSVSSHYT 66
           RH+R LSTAA A A A+ AA   + +SSSIS+S+AKS LR+E+DPD+AL IYSSVS HYT
Sbjct: 10  RHVRHLSTAAAAAAAASTAA--ASASSSSISVSRAKSILRSEFDPDRALEIYSSVSKHYT 69

Query: 67  SPVSSRYAQELTIRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGQAGMFEHA 126
           SP++SRYAQ+LT++RLAKSRRF DIE+LIESHKNDPKITQEP+LSTLIRSYG AGMF+HA
Sbjct: 70  SPLASRYAQDLTVKRLAKSRRFADIETLIESHKNDPKITQEPYLSTLIRSYGIAGMFQHA 129

Query: 127 MRTYNQMEDFGTPRSVISFNALLCAFNHSKQFDKVPQLFDEIPKKYNFSPNKISYGILVK 186
           +RT+NQME+ GTPRS ISFNALL A N SK FD+VP+ F+EIP++Y   P+KISYGILVK
Sbjct: 130 LRTFNQMEELGTPRSSISFNALLSACNQSKLFDQVPKFFEEIPRRYGIXPDKISYGILVK 189

Query: 187 SYCESGSPEKAMQIVREMEENDVEVTAVTFTTILDALYKKGESEEAEKIWNKMISKGCEL 246
           SYCESG  +KA+ +++EMEE  VE+TAVTFTTILDALYK+G+S+ AEK+W++M  KGC L
Sbjct: 190 SYCESGLSDKAISMLKEMEEKGVEITAVTFTTILDALYKQGQSDRAEKVWHEMAKKGC-L 249

Query: 247 DVGAYNVRLMHEHGGKPEHVEALIEEMANSGMKPDTISYNYLMTCYCKNGMIDEAKKVYD 306
           DVGAYNV++M  HGG PE+V+ALI+EM+N+G+KPDTISYNYLMT YCK+GM+DEAKKVY 
Sbjct: 250 DVGAYNVKIMFAHGGDPENVKALIDEMSNAGLKPDTISYNYLMTSYCKSGMMDEAKKVYA 309

Query: 307 DMEINGCNKNAATFRTFMYYLCRNGDYEKGYMVFKESVKVHKIPDVNTVKYLVEGLMEKK 366
           ++E  GC+ NAATFRT +YYLCR+GD+E GY VFK+S    KIPD  T+++LVEGL++KK
Sbjct: 310 ELEETGCHPNAATFRTLIYYLCRSGDFETGYKVFKQSAFRRKIPDFGTLRHLVEGLVQKK 369

Query: 367 KMKEAKGLIRTIRKKFPPDSLKTWRKVEEALGLA--SSSKADDETEE 412
           K KEAKGLIRT++K FP + L  WRK+EE LGLA   SS A D+ +E
Sbjct: 370 KTKEAKGLIRTVKKNFPANFLNVWRKLEEDLGLAGVDSSPAADDVQE 413

[Close]

BLAST of CmoCh16G007100 vs. TrEMBL
Match: F6GWY1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g01460 PE=4 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 1.4e-153
Identity = 280/407 (68.80%), Postives = 345/407 (84.77%), Query Frame = 1


Query: 7   RHIRRLSTAATATATATAAAKATATTSSSISISKAKSKLRTEYDPDKALNIYSSVSSHYT 66
           RH+R LSTAA A A+ TAAA A+   SSSIS+S+AKS LR+E+DPD+AL IYSSVS HYT
Sbjct: 10  RHVRHLSTAAAAAAS-TAAASAS---SSSISVSRAKSILRSEFDPDRALEIYSSVSKHYT 69

Query: 67  SPVSSRYAQELTIRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGQAGMFEHA 126
           SP++SRYAQ+LT++RLAKSRRF DIE+LIESHKNDPKITQEP+LSTLIRSYG AGMF+HA
Sbjct: 70  SPLASRYAQDLTVKRLAKSRRFADIETLIESHKNDPKITQEPYLSTLIRSYGIAGMFQHA 129

Query: 127 MRTYNQMEDFGTPRSVISFNALLCAFNHSKQFDKVPQLFDEIPKKYNFSPNKISYGILVK 186
           +RT+NQME+ GTPRS ISFNALL A N SK FD+VP+ F+EIP++Y   P+KISYGILVK
Sbjct: 130 LRTFNQMEELGTPRSSISFNALLSACNQSKLFDQVPKFFEEIPRRYGVLPDKISYGILVK 189

Query: 187 SYCESGSPEKAMQIVREMEENDVEVTAVTFTTILDALYKKGESEEAEKIWNKMISKGCEL 246
           SYCESG  +KA+ +++EMEE  VE+TAVTFTTILDALYK+G+S+ AEK+W++M  KGC L
Sbjct: 190 SYCESGLSDKAISMLKEMEEKGVEITAVTFTTILDALYKQGQSDRAEKVWHEMAKKGC-L 249

Query: 247 DVGAYNVRLMHEHGGKPEHVEALIEEMANSGMKPDTISYNYLMTCYCKNGMIDEAKKVYD 306
           DVGAYNV++M  HGG PE+V+ALI+EM+N+G+KPDTISYNYLMT YCK+GM+DEAKKVY 
Sbjct: 250 DVGAYNVKIMFAHGGDPENVKALIDEMSNAGLKPDTISYNYLMTSYCKSGMVDEAKKVYA 309

Query: 307 DMEINGCNKNAATFRTFMYYLCRNGDYEKGYMVFKESVKVHKIPDVNTVKYLVEGLMEKK 366
           ++E  GC+ NAATFRT +YYLCR+GD+E GY VFK+S    KIPD  T+++LVEGL++KK
Sbjct: 310 ELEETGCHPNAATFRTLIYYLCRSGDFETGYKVFKQSAFRRKIPDFGTLRHLVEGLVQKK 369

Query: 367 KMKEAKGLIRTIRKKFPPDSLKTWRKVEEALGLA--SSSKADDETEE 412
           K KEAKGLIRT++K FP + L  WRK+EE LGLA   SS A D+ +E
Sbjct: 370 KTKEAKGLIRTVKKNFPANFLNVWRKLEEDLGLAGVDSSPAADDVQE 411

[Close]

BLAST of CmoCh16G007100 vs. TAIR10
Match: AT4G36680.1 (AT4G36680.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 508.8 bits (1309), Expect = 3.1e-144
Identity = 258/405 (63.70%), Postives = 318/405 (78.52%), Query Frame = 1


Query: 2   SSIATRHIRRLSTAATATATATAAAKATATTSSSISISKAKSKLRTEYDPDKALNIYSSV 61
           S I+ R +RR ++AA    T       TA +S  IS+SKAKS LR E+DPDKAL IY++V
Sbjct: 4   SRISLRLVRRFASAAADGTT-------TAPSSGKISVSKAKSTLRKEHDPDKALKIYANV 63

Query: 62  SSHYTSPVSSRYAQELTIRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGQAG 121
           S H  SPVSSRYAQELT+RRLAK RRF DIE+LIESHKNDPKI +EPF STLIRSYGQA 
Sbjct: 64  SDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQAS 123

Query: 122 MFEHAMRTYNQMEDFGTPRSVISFNALLCAFNHSKQFDKVPQLFDEIPKKYN-FSPNKIS 181
           MF HAMRT+ QM+ +GTPRS +SFNALL A  HSK FDKVPQLFDEIP++YN   P+KIS
Sbjct: 124 MFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKIS 183

Query: 182 YGILVKSYCESGSPEKAMQIVREMEENDVEVTAVTFTTILDALYKKGESEEAEKIWNKMI 241
           YGIL+KSYC+SG+PEKA++I+R+M+   +EVT + FTTIL +LYKKGE E A+ +WN+M+
Sbjct: 184 YGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMV 243

Query: 242 SKGCELDVGAYNVRLMHEHGGKPEHVEALIEEMANSGMKPDTISYNYLMTCYCKNGMIDE 301
            KGCELD  AYNVR+M      PE V+ LIEEM++ G+KPDTISYNYLMT YC+ GM+DE
Sbjct: 244 KKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDE 303

Query: 302 AKKVYDDMEINGCNKNAATFRTFMYYLCRNGDYEKGYMVFKESVKVHKIPDVNTVKYLVE 361
           AKKVY+ +E N C  NAATFRT +++LC +  YE+GY +FK+SV +HKIPD NT+K+LV 
Sbjct: 304 AKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVV 363

Query: 362 GLMEKKKMKEAKGLIRTIRKKFPPDSLKTWRKVEEALGLASSSKA 406
           GL+E KK  +AKGLIRT++KKFPP  L  W+K+EE LGL S + A
Sbjct: 364 GLVENKKRDDAKGLIRTVKKKFPPSFLNAWKKLEEELGLYSKTDA 401

[Close]

BLAST of CmoCh16G007100 vs. TAIR10
Match: AT2G18520.1 (AT2G18520.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 446.4 bits (1147), Expect = 1.9e-125
Identity = 232/405 (57.28%), Postives = 302/405 (74.57%), Query Frame = 1


Query: 2   SSIATRHIRRLSTAATATATATAAAKATATTSSSISISKAKSKLRTEYDPDKALNIYSSV 61
           S +  R +RR STA    +  TA   A       I++SKAKSKLR   DPDKAL IY SV
Sbjct: 4   SRLYLRFLRRFSTATGIDSQTTAYPGA-------ITMSKAKSKLRKVQDPDKALAIYKSV 63

Query: 62  SSHYTSPVSSRYAQELTIRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGQAG 121
           S++ TSP+SSRYA ELT++RLAKS+RF DIE+LIESHKN+PKI  E FLSTLIRSYG+A 
Sbjct: 64  SNNSTSPLSSRYAMELTVQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRAS 123

Query: 122 MFEHAMRTYNQMEDFGTPRSVISFNALLCAFNHSKQFDKVPQLFDEIPKKY-NFSPNKIS 181
           MF+HAM+ + +M+  GTPR+V+SFNALL A  HS  F++VPQLFDE P++Y N +P+KIS
Sbjct: 124 MFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKIS 183

Query: 182 YGILVKSYCESGSPEKAMQIVREMEENDVEVTAVTFTTILDALYKKGESEEAEKIWNKMI 241
           YG+L+KSYC+SG PEKAM+I+R+ME   VEVT + FTTIL +LYK G  +EAE +W +M+
Sbjct: 184 YGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMV 243

Query: 242 SKGCELDVGAYNVRLMHEHGGKPEHVEALIEEMANSGMKPDTISYNYLMTCYCKNGMIDE 301
           +KGC+LD   YNVRLM+     PE V+ L+EEM++ G+KPDT+SYNYLMT YC  GM+ E
Sbjct: 244 NKGCDLDNTVYNVRLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSE 303

Query: 302 AKKVYDDMEINGCNKNAATFRTFMYYLCRNGDYEKGYMVFKESVKVHKIPDVNTVKYLVE 361
           AKKVY+ +E      NAATFRT +++LC NG Y++G  VFK+S  VHKIPD  T K+L E
Sbjct: 304 AKKVYEGLE----QPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTE 363

Query: 362 GLMEKKKMKEAKGLIRTIRKKFPPDSLKTWRKVEEALGLASSSKA 406
           GL++  +M++A+G+ R ++KKFPP  +  W+K+EE LGL S   A
Sbjct: 364 GLVKNNRMEDARGVARIVKKKFPPRLVTEWKKLEEKLGLYSKGNA 397

[Close]

BLAST of CmoCh16G007100 vs. TAIR10
Match: AT1G61870.1 (AT1G61870.1 pentatricopeptide repeat 336)

HSP 1 Score: 200.3 bits (508), Expect = 2.3e-51
Identity = 126/395 (31.90%), Postives = 218/395 (55.19%), Query Frame = 1


Query: 5   ATRHIRRLSTAATATATATAAAKATATTSSSISISKAKSKLRTEYDPDKALNIYSSVSSH 64
           A+  IR LS+A+T  +  +     T  TS   S   A S L++E DPD+ L I  + S  
Sbjct: 19  ASPQIRSLSSASTILSPDSK----TPLTSKEKS-KAALSLLKSEKDPDRILEICRAASLT 78

Query: 65  YTSPVSSRYAQELTIRRLAKSRRFDDIESLIESH-KNDPKITQEPFLSTLIRSYGQAGMF 124
               +  R A    +  LA+ + F  + +L++   +N P +  E F +  I  Y QA M 
Sbjct: 79  PDCRID-RIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANML 138

Query: 125 EHAMRTYNQMEDFGTPRSVISFNALLCAFNHSKQFDKVPQLFDEIPKKYNFSPNKISYGI 184
           +H++R +  +E F   R+V S NALL A   +K + +  +++ E+PK Y   P+  +Y  
Sbjct: 139 DHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNR 198

Query: 185 LVKSYCESGSPEKAMQIVREMEENDVEVTAVTFTTILDALYKKGESEEAEKIWNKMISKG 244
           ++K +CESGS   +  IV EME   ++  + +F  ++   Y + +S+E  K+   M  +G
Sbjct: 199 MIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRG 258

Query: 245 CELDVGAYNVRLMHE-HGGKPEHVEALIEEMANSGMKPDTISYNYLMTCYCKNGMIDEAK 304
             + V  YN+R+       K +  +AL++ M ++GMKP+T++Y++L+  +C     +EAK
Sbjct: 259 VNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAK 318

Query: 305 KVYDDMEINGCNKNAATFRTFMYYLCRNGDYEKGYMVFKESVKVHKIPDVNTVKYLVEGL 364
           K++  M   GC  ++  + T +YYLC+ GD+E    + KES++ + +P  + +K LV GL
Sbjct: 319 KLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGL 378

Query: 365 MEKKKMKEAKGLIRTIRKKFPPDSLKTWRKVEEAL 398
            +  K++EAK LI  +++KF   +++ W +VE AL
Sbjct: 379 AKDSKVEEAKELIGQVKEKF-TRNVELWNEVEAAL 406

[Close]

BLAST of CmoCh16G007100 vs. TAIR10
Match: AT1G55890.1 (AT1G55890.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 197.2 bits (500), Expect = 2.0e-50
Identity = 119/371 (32.08%), Postives = 208/371 (56.06%), Query Frame = 1


Query: 9   IRRLSTAATATATATAAAKATATTSSSISISKAKSKLRTEYDPDKALNIYSSV--SSHYT 68
           IRR S+AAT  +  TA   A +    S++     S +  E +P + +  +     S  + 
Sbjct: 17  IRRFSSAATVVSEPTAVTAAISPPQKSLT-----SLVNGERNPKRIVEKFKKACESERFR 76

Query: 69  SPVSSRYAQELTIRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGQAGMFEHA 128
           + ++     + T+RRL  ++R   +E ++E  K    +++E F + +I  YG+AGMFE+A
Sbjct: 77  TNIA---VYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENA 136

Query: 129 MRTYNQMEDFGTPRSVISFNALLCAFNHSKQFDKVPQLFDEIPKKYNFSPNKISYGILVK 188
            + + +M +    RSV+SFNALL A+  SK+FD V +LF+E+P K +  P+ +SY  L+K
Sbjct: 137 QKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIK 196

Query: 189 SYCESGSPEKAMQIVREMEENDVEVTAVTFTTILDALYKKGESEEAEKIWNKMISKGCEL 248
           + CE  S  +A+ ++ E+E   ++   VTF T+L + Y KG+ E  E+IW KM+ K   +
Sbjct: 197 ALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAI 256

Query: 249 DVGAYNVRLMH-EHGGKPEHVEALIEEMANSGMKPDTISYNYLMTCYCKNGMIDEAKKVY 308
           D+  YN RL+   +  K + +  L  E+  SG+KPD  S+N ++      G +DEA+  Y
Sbjct: 257 DIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWY 316

Query: 309 DDMEINGCNKNAATFRTFMYYLCRNGDYEKGYMVFKESVKVHKIPDVNTVKYLVEGLMEK 368
            ++  +G   + ATF   +  +C+ GD+E    +FKE+     +    T++ LV+ L++ 
Sbjct: 317 KEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKG 376

Query: 369 KKMKEAKGLIR 377
            K +EA+ +++
Sbjct: 377 SKREEAEEIVK 379

[Close]

BLAST of CmoCh16G007100 vs. TAIR10
Match: AT3G13160.1 (AT3G13160.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 192.6 bits (488), Expect = 4.8e-49
Identity = 96/301 (31.89%), Postives = 173/301 (57.48%), Query Frame = 1


Query: 76  ELTIRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGQAGMFEHAMRTYNQMED 135
           E T+RRLA +++F+ +E ++E     P +++E F++ +I  YG+ GMFE+A + +++M +
Sbjct: 75  ERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPE 134

Query: 136 FGTPRSVISFNALLCAFNHSKQFDKVPQLFDEIPKKYNFSPNKISYGILVKSYCESGSPE 195
               R+ +SFNALL A  +SK+FD V  +F E+P K +  P+  SY  L+K  C  GS  
Sbjct: 135 RNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFT 194

Query: 196 KAMQIVREMEENDVEVTAVTFTTILDALYKKGESEEAEKIWNKMISKGCELDVGAYNVRL 255
           +A+ ++ E+E   ++   +TF  +L   Y KG+ EE E+IW +M+ K  + D+ +YN RL
Sbjct: 195 EAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARL 254

Query: 256 MH-EHGGKPEHVEALIEEMANSGMKPDTISYNYLMTCYCKNGMIDEAKKVYDDMEINGCN 315
           +      K E + +L +++  + +KPD  ++  ++  +   G +DEA   Y ++E NGC 
Sbjct: 255 LGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCR 314

Query: 316 KNAATFRTFMYYLCRNGDYEKGYMVFKESVKVHKIPDVNTVKYLVEGLMEKKKMKEAKGL 375
                F + +  +C+ GD E  Y + KE      + D   ++ +V+ L++  K  EA+ +
Sbjct: 315 PLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEI 374

[Close]

BLAST of CmoCh16G007100 vs. NCBI nr
Match: gi|659107543|ref|XP_008453729.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g36680, mitochondrial [Cucumis melo])

HSP 1 Score: 682.9 bits (1761), Expect = 3.4e-193
Identity = 350/421 (83.14%), Postives = 383/421 (90.97%), Query Frame = 1


Query: 3   SIATRH-IRRLSTAATATATATAAAKATATTSSSISISKAKSKLRTEYDPDKALNIYSSV 62
           SI+TRH IRRLSTAA  TA A AA  AT TTSSS+SISKAKSKLR EYDPDKAL IYSSV
Sbjct: 4   SISTRHHIRRLSTAA--TAAAAAATNATETTSSSLSISKAKSKLRNEYDPDKALEIYSSV 63

Query: 63  SSHYTSPVSSRYAQELTIRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGQAG 122
           SSHYTSPV+SRYAQE+TIRRLAKSRRF DIESLIESHKNDPKITQEPFLSTLIRSYG+ G
Sbjct: 64  SSHYTSPVTSRYAQEITIRRLAKSRRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRVG 123

Query: 123 MFEHAMRTYNQMEDFGTPRSVISFNALLCAFNHSKQFDKVPQLFDEIPKKYNFSPNKISY 182
           MFEHAMRTYNQM D GTPRS +SFNALL A NHSKQFDKVPQLFDE+PK+YNFSPNKISY
Sbjct: 124 MFEHAMRTYNQMGDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRYNFSPNKISY 183

Query: 183 GILVKSYCESGSPEKAMQIVREMEENDVEVTAVTFTTILDALYKKGESEEAEKIWNKMIS 242
           GILVKSYC++GSPEKA+QI+REMEENDVEVTAVTFTTI++ALYKKGES EAEKIW+KM+S
Sbjct: 184 GILVKSYCDAGSPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKMMS 243

Query: 243 KGCELDVGAYNVRLMHEHGGKPEHVEALIEEMANSGMKPDTISYNYLMTCYCKNGMIDEA 302
           KGCELDVGAYNVRLMHEHGGKPE V+A+IEEMANSG+KPD ISYNYLMTCYCKNGMIDEA
Sbjct: 244 KGCELDVGAYNVRLMHEHGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMIDEA 303

Query: 303 KKVYDDMEINGCNKNAATFRTFMYYLCRNGDYEKGYMVFKESVKVHKIPDVNTVKYLVEG 362
           KKVY+DMEINGCNKNAATFRTF+Y+LCRNG+YEKGY VFKESVK++KIPD NT+KYLVEG
Sbjct: 304 KKVYNDMEINGCNKNAATFRTFIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVEG 363

Query: 363 LMEKKKMKEAKGLIRTIRKKFPPDSLKTWRKVEEALGLAS------------SSKADDET 411
           L+EKK M+EAKGLIRT+RKKFPPD+LK WR+VEE +GLAS            SSK DDET
Sbjct: 364 LVEKKMMREAKGLIRTVRKKFPPDTLKAWREVEEGVGLASAGDDVSSKDDNVSSKDDDET 422

[Close]

BLAST of CmoCh16G007100 vs. NCBI nr
Match: gi|778697504|ref|XP_011654338.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 656.4 bits (1692), Expect = 3.4e-185
Identity = 328/388 (84.54%), Postives = 359/388 (92.53%), Query Frame = 1


Query: 28  ATA-TTSSSISISKAKSKLRTEYDPDKALNIYSSVSSHYTSPVSSRYAQELTIRRLAKSR 87
           ATA T+SSS+SIS+AKSKLRTEYDPDKA+ IYSSVSSHYTSPV+SRYAQE+TIRRLAK+R
Sbjct: 29  ATATTSSSSLSISRAKSKLRTEYDPDKAVEIYSSVSSHYTSPVTSRYAQEITIRRLAKAR 88

Query: 88  RFDDIESLIESHKNDPKITQEPFLSTLIRSYGQAGMFEHAMRTYNQMEDFGTPRSVISFN 147
           RF DIESLIESHKNDPKITQEPFLSTLIRSYG+ GMFEHAMRTYNQM D GTPRS +SFN
Sbjct: 89  RFKDIESLIESHKNDPKITQEPFLSTLIRSYGRVGMFEHAMRTYNQMGDLGTPRSALSFN 148

Query: 148 ALLCAFNHSKQFDKVPQLFDEIPKKYNFSPNKISYGILVKSYCESGSPEKAMQIVREMEE 207
           ALL A N+SKQFDKVPQLFDE+PK+YNFSPNK SYGILVKSYC++GSPEKAM+IVREMEE
Sbjct: 149 ALLTACNNSKQFDKVPQLFDEMPKRYNFSPNKFSYGILVKSYCDAGSPEKAMEIVREMEE 208

Query: 208 NDVEVTAVTFTTILDALYKKGESEEAEKIWNKMISKGCELDVGAYNVRLMHEHGGKPEHV 267
           N VEV AVTFTTIL+ALYKKG+S EAEKIW  MISKGCELDVGAYNVRLMHEHGGKPEHV
Sbjct: 209 NGVEVNAVTFTTILNALYKKGDSAEAEKIWETMISKGCELDVGAYNVRLMHEHGGKPEHV 268

Query: 268 EALIEEMANSGMKPDTISYNYLMTCYCKNGMIDEAKKVYDDMEINGCNKNAATFRTFMYY 327
           +ALIEEMANSG+KPD ISYNYLMTCYCKNGM DEAKKVY+DMEINGCNKNAATFRT +Y+
Sbjct: 269 QALIEEMANSGLKPDAISYNYLMTCYCKNGMFDEAKKVYNDMEINGCNKNAATFRTLIYH 328

Query: 328 LCRNGDYEKGYMVFKESVKVHKIPDVNTVKYLVEGLMEKKKMKEAKGLIRTIRKKFPPDS 387
           LCRNG+YEKGY VFKESVK++KIPD NT+KYLVEGL+EKK M+EAKGLIRTIRKKFPPD+
Sbjct: 329 LCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVEGLVEKKMMREAKGLIRTIRKKFPPDT 388

Query: 388 LKTWRKVEEALGLAS-----SSKADDET 410
           LK WR+VEE +GLAS     SSK DDET
Sbjct: 389 LKAWREVEEGVGLASAGDDVSSKDDDET 416

[Close]

BLAST of CmoCh16G007100 vs. NCBI nr
Match: gi|700198104|gb|KGN53262.1| (hypothetical protein Csa_4G038790 [Cucumis sativus])

HSP 1 Score: 645.6 bits (1664), Expect = 5.9e-182
Identity = 321/384 (83.59%), Postives = 352/384 (91.67%), Query Frame = 1


Query: 31  TTSSSISISKAKSKLRTEYDPDKALNIYSSVSSHYTSPVSSRYAQELTIRRLAKSRRFDD 90
           T S+S+S   +KSKLRTEYDPDKA+ IYSSVSSHYTSPV+SRYAQE+TIRRLAK+RRF D
Sbjct: 63  TPSTSVS---SKSKLRTEYDPDKAVEIYSSVSSHYTSPVTSRYAQEITIRRLAKARRFKD 122

Query: 91  IESLIESHKNDPKITQEPFLSTLIRSYGQAGMFEHAMRTYNQMEDFGTPRSVISFNALLC 150
           IESLIESHKNDPKITQEPFLSTLIRSYG+ GMFEHAMRTYNQM D GTPRS +SFNALL 
Sbjct: 123 IESLIESHKNDPKITQEPFLSTLIRSYGRVGMFEHAMRTYNQMGDLGTPRSALSFNALLT 182

Query: 151 AFNHSKQFDKVPQLFDEIPKKYNFSPNKISYGILVKSYCESGSPEKAMQIVREMEENDVE 210
           A N+SKQFDKVPQLFDE+PK+YNFSPNK SYGILVKSYC++GSPEKAM+IVREMEEN VE
Sbjct: 183 ACNNSKQFDKVPQLFDEMPKRYNFSPNKFSYGILVKSYCDAGSPEKAMEIVREMEENGVE 242

Query: 211 VTAVTFTTILDALYKKGESEEAEKIWNKMISKGCELDVGAYNVRLMHEHGGKPEHVEALI 270
           V AVTFTTIL+ALYKKG+S EAEKIW  MISKGCELDVGAYNVRLMHEHGGKPEHV+ALI
Sbjct: 243 VNAVTFTTILNALYKKGDSAEAEKIWETMISKGCELDVGAYNVRLMHEHGGKPEHVQALI 302

Query: 271 EEMANSGMKPDTISYNYLMTCYCKNGMIDEAKKVYDDMEINGCNKNAATFRTFMYYLCRN 330
           EEMANSG+KPD ISYNYLMTCYCKNGM DEAKKVY+DMEINGCNKNAATFRT +Y+LCRN
Sbjct: 303 EEMANSGLKPDAISYNYLMTCYCKNGMFDEAKKVYNDMEINGCNKNAATFRTLIYHLCRN 362

Query: 331 GDYEKGYMVFKESVKVHKIPDVNTVKYLVEGLMEKKKMKEAKGLIRTIRKKFPPDSLKTW 390
           G+YEKGY VFKESVK++KIPD NT+KYLVEGL+EKK M+EAKGLIRTIRKKFPPD+LK W
Sbjct: 363 GEYEKGYKVFKESVKMNKIPDFNTLKYLVEGLVEKKMMREAKGLIRTIRKKFPPDTLKAW 422

Query: 391 RKVEEALGLAS-----SSKADDET 410
           R+VEE +GLAS     SSK DDET
Sbjct: 423 REVEEGVGLASAGDDVSSKDDDET 443

[Close]

BLAST of CmoCh16G007100 vs. NCBI nr
Match: gi|1009145187|ref|XP_015890196.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g36680, mitochondrial [Ziziphus jujuba])

HSP 1 Score: 579.7 bits (1493), Expect = 4.0e-162
Identity = 287/410 (70.00%), Postives = 351/410 (85.61%), Query Frame = 1


Query: 2   SSIATRHIRRLSTAATATATATAAAKATATTSSSISISKAKSKLRTEYDPDKALNIYSSV 61
           SS   RH+R L   ++  AT T+AAK       SISIS+AKSKLR+E+DPDKAL IYSS+
Sbjct: 3   SSTPIRHLRHLRHLSSTAATTTSAAKP------SISISRAKSKLRSEHDPDKALEIYSSL 62

Query: 62  SSHYTSPVSSRYAQELTIRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGQAG 121
           S +Y SP SSRYAQ+LT+RRLAK+RRF DIE+LIESHK DPKIT+EP+LSTLIRSYG AG
Sbjct: 63  SKNYCSPTSSRYAQDLTVRRLAKARRFSDIETLIESHKTDPKITEEPYLSTLIRSYGLAG 122

Query: 122 MFEHAMRTYNQMEDFGTPRSVISFNALLCAFNHSKQFDKVPQLFDEIPKKYNFSPNKISY 181
           MF+HA+RT+ QM++ GT RSVISFN LL A NHSK FDKVP LF++IP KY F+PNKISY
Sbjct: 123 MFDHALRTFEQMDELGTSRSVISFNTLLSACNHSKLFDKVPVLFNDIPAKYGFTPNKISY 182

Query: 182 GILVKSYCESGSPEKAMQIVREMEENDVEVTAVTFTTILDALYKKGESEEAEKIWNKMIS 241
           GIL+K+YCE+GSPEKA++ +REME+  +EVTAVTFTTILD LYKKGE+EEAEK+W+ M++
Sbjct: 183 GILIKAYCEAGSPEKAIETLREMEKKGIEVTAVTFTTILDTLYKKGETEEAEKLWSTMVN 242

Query: 242 KGCELDVGAYNVRLMHEHGGKPEHVEALIEEMANSGMKPDTISYNYLMTCYCKNGMIDEA 301
           K CE+DV AYNVR+MH  GGKPE V+ALI+EM+N+G+KPDTISYNYLMTCYCKNGM++EA
Sbjct: 243 KDCEIDVAAYNVRIMHCQGGKPEKVKALIDEMSNAGLKPDTISYNYLMTCYCKNGMMEEA 302

Query: 302 KKVYDDMEINGCNKNAATFRTFMYYLCRNGDYEKGYMVFKESVKVHKIPDVNTVKYLVEG 361
           K VY+ +E NGCN NAATFRT +YYLCR+GD+E+GY VFK SV VHKIPD NT+K+LVEG
Sbjct: 303 KNVYEGLEDNGCNPNAATFRTLIYYLCRSGDFERGYKVFKTSVGVHKIPDFNTLKHLVEG 362

Query: 362 LMEKKKMKEAKGLIRTIRKKFPPDSLKTWRKVEEALGLASSSKADDETEE 412
           L++KKK+KEAKGLIRTI+KKFPP+ L +W+KVEE+LGLAS+S A   ++E
Sbjct: 363 LVKKKKIKEAKGLIRTIKKKFPPNVLNSWKKVEESLGLASASDASSISDE 406

[Close]

BLAST of CmoCh16G007100 vs. NCBI nr
Match: gi|590703842|ref|XP_007046988.1| (Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma cacao])

HSP 1 Score: 572.0 bits (1473), Expect = 8.3e-160
Identity = 285/411 (69.34%), Postives = 346/411 (84.18%), Query Frame = 1


Query: 2   SSIATRHIRRLSTAATATATATAAAKATATTSSSISISKAKSKLRTEYDPDKALNIYSSV 61
           SSI  RH+R LST  T          ATA++S SISIS+AK+KLRTEYDPDKAL IYSSV
Sbjct: 3   SSIPLRHLRHLSTTTTTA--------ATASSSISISISQAKNKLRTEYDPDKALEIYSSV 62

Query: 62  SSHYTSPVSSRYAQELTIRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGQAG 121
           S HY+SP SSRYAQ+LT+RRLAKSRRF DIESLIESHK DPKITQEPFLSTLIRSYG AG
Sbjct: 63  SKHYSSPSSSRYAQDLTVRRLAKSRRFSDIESLIESHKTDPKITQEPFLSTLIRSYGIAG 122

Query: 122 MFEHAMRTYNQMEDFGTPRSVISFNALLCAFNHSKQFDKVPQLFDEIPKKY-NFSPNKIS 181
           M +HA++T++QM+ FGTPRS ISFN+LL A NHS+QFDKVPQLF+EIPKKY + SP+K+S
Sbjct: 123 MLDHAIKTFDQMDQFGTPRSTISFNSLLSAGNHSRQFDKVPQLFEEIPKKYGSVSPDKVS 182

Query: 182 YGILVKSYCESGSPEKAMQIVREMEENDVEVTAVTFTTILDALYKKGESEEAEKIWNKMI 241
           YGIL+KSYCE+G P+K ++++REME   VEVTAVTFTTIL+ALYKKG++EEAEK+W+ M+
Sbjct: 183 YGILIKSYCEAGHPDKGIEVLREMERKSVEVTAVTFTTILNALYKKGKTEEAEKLWSDMM 242

Query: 242 SKGCELDVGAYNVRLMHEHGGKPEHVEALIEEMANSGMKPDTISYNYLMTCYCKNGMIDE 301
             GCELDV +YNVR+M+  GG PE V+ LI+EM+  G+KPDTISYNYLMTCYCKNGM+DE
Sbjct: 243 KNGCELDVASYNVRIMNLQGGDPEKVKELIDEMSTMGLKPDTISYNYLMTCYCKNGMLDE 302

Query: 302 AKKVYDDMEINGCNKNAATFRTFMYYLCRNGDYEKGYMVFKESVKVHKIPDVNTVKYLVE 361
           AKKVY+ +E NGCN NAATFRT ++YLC NG +E+GY VFKESV++HKIPD NT+K+LVE
Sbjct: 303 AKKVYEGLEGNGCNPNAATFRTLVFYLCLNGLHEQGYKVFKESVRLHKIPDFNTLKHLVE 362

Query: 362 GLMEKKKMKEAKGLIRTIRKKFPPDSLKTWRKVEEALGLASSSKADDETEE 412
           GL++ KK+KEAKGLIRT++KKFPP+ L  W+K+EE LGL S +    E +E
Sbjct: 363 GLVKNKKIKEAKGLIRTVKKKFPPNFLNAWKKLEEELGLVSGNAGGGEAQE 405

The following BLAST results are available for this feature:

BLAST of CmoCh16G007100 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PP352_ARATH	5.4e-143	63.70	Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidop...	[more]
PP162_ARATH	3.3e-124	57.28	Pentatricopeptide repeat-containing protein At2g18520, mitochondrial OS=Arabidop...	[more]
PPR87_ARATH	4.1e-50	31.90	Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidop...	[more]
PPR82_ARATH	3.5e-49	32.08	Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidop...	[more]
PP226_ARATH	8.6e-48	31.89	Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidop...	[more]

BLAST of CmoCh16G007100 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXX6_CUCSA	4.1e-182	83.59	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G038790 PE=4 SV=1	[more]
A0A061DFV5_THECC	5.8e-160	69.34	Tetratricopeptide repeat (TPR)-like superfamily protein OS=Theobroma cacao GN=TC...	[more]
A0A0D2PQ35_GOSRA	2.3e-156	68.86	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G068700 PE=4 SV=1	[more]
A5BUJ7_VITVI	1.1e-153	68.30	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032192 PE=4 SV=1	[more]
F6GWY1_VITVI	1.4e-153	68.80	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g01460 PE=4 SV=...	[more]

BLAST of CmoCh16G007100 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G36680.1	3.1e-144	63.70	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G18520.1	1.9e-125	57.28	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G61870.1	2.3e-51	31.90	pentatricopeptide repeat 336	[more]
AT1G55890.1	2.0e-50	32.08	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G13160.1	4.8e-49	31.89	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of CmoCh16G007100 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659107543\|ref\|XP_008453729.1\|	3.4e-193	83.14	PREDICTED: pentatricopeptide repeat-containing protein At4g36680, mitochondrial ...	[more]
gi\|778697504\|ref\|XP_011654338.1\|	3.4e-185	84.54	PREDICTED: pentatricopeptide repeat-containing protein At4g36680, mitochondrial-...	[more]
gi\|700198104\|gb\|KGN53262.1\|	5.9e-182	83.59	hypothetical protein Csa_4G038790 [Cucumis sativus]	[more]
gi\|1009145187\|ref\|XP_015890196.1\|	4.0e-162	70.00	PREDICTED: pentatricopeptide repeat-containing protein At4g36680, mitochondrial ...	[more]
gi\|590703842\|ref\|XP_007046988.1\|	8.3e-160	69.34	Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR011990	TPR-like_helical_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G007100.1	CmoCh16G007100.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 111..137 score: 7.
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 280..329 score: 8.6E-13coord: 141..189 score: 2.9E-8coord: 213..253 score: 6.7
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 179..212 score: 1.2E-7coord: 319..345 score: 5.3E-4coord: 143..177 score: 2.0E-4coord: 111..138 score: 2.9E-6coord: 283..315 score: 3.6E-10coord: 214..248 score: 1.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 106..140 score: 8.714coord: 177..211 score: 11.422coord: 316..350 score: 8.396coord: 212..246 score: 11.312coord: 281..315 score: 12.693coord: 141..171 score: 7.607coord: 351..381 score: 6
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 107..242 score: 1.9E-9coord: 279..377 score: 1.
IPR011990	Tetratricopeptide-like helical domain	unknown	SSF48452	TPR-like	coord: 150..344 score: 3.15E-5coord: 281..385 score: 2.5
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 10..397 score: 1.7E
None	No IPR available	PANTHER	PTHR24015:SF506	SUBFAMILY NOT NAMED	coord: 10..397 score: 1.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh16G007100	Cucsa.201300	Cucumber (Gy14) v1	cgycmoB0595
CmoCh16G007100	CmaCh16G006530	Cucurbita maxima (Rimu)	cmacmoB322
CmoCh16G007100	Cla014532	Watermelon (97103) v1	cmowmB301
CmoCh16G007100	Csa4G038790	Cucumber (Chinese Long) v2	cmocuB325
CmoCh16G007100	MELO3C017551	Melon (DHL92) v3.5.1	cmomeB294
CmoCh16G007100	ClCG07G009040	Watermelon (Charleston Gray)	cmowcgB294
CmoCh16G007100	Lsi07G002140	Bottle gourd (USVL1VR-Ls)	cmolsiB315
CmoCh16G007100	Cp4.1LG14g01660	Cucurbita pepo (Zucchini)	cmocpeB307
CmoCh16G007100	MELO3C017551.2	Melon (DHL92) v3.6.1	cmomedB336
CmoCh16G007100	CsaV3_4G005170	Cucumber (Chinese Long) v3	cmocucB0388
CmoCh16G007100	Cla97C00G000050	Watermelon (97103) v2	cmowmbB325
CmoCh16G007100	Carg05771	Silver-seed gourd	carcmoB1366

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh16G007100	Wild cucumber (PI 183967)	cmocpiB332
CmoCh16G007100	Watermelon (97103) v1	cmowmB318
CmoCh16G007100	Cucurbita pepo (Zucchini)	cmocpeB312
CmoCh16G007100	Cucurbita pepo (Zucchini)	cmocpeB316
CmoCh16G007100	Cucumber (Gy14) v2	cgybcmoB467
CmoCh16G007100	Silver-seed gourd	carcmoB1258
CmoCh16G007100	Watermelon (97103) v2	cmowmbB314
CmoCh16G007100	Watermelon (97103) v2	cmowmbB336
CmoCh16G007100	Wax gourd	cmowgoB0428
CmoCh16G007100	Cucurbita moschata (Rifu)	cmocmoB285
CmoCh16G007100	Cucurbita maxima (Rimu)	cmacmoB700