CsaV3_4G003750 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_4G003750
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	protein YIF1B
Location	chr4 : 2282262 .. 2288033 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GACTCGCTCGTCTTTCTTCACAGGTTCCTCTTTTGTTTTTCTTTAGTACTCCATCATATTGTTTTTTTTATTTGAATCTGGAAAGCACGGCGTGTTTAATTTCGCGAAATTACGAAGAAATTGTTACTTGCGTCTTGTGATATGAGCTATTCATTTGCCTTTGGTTTCTATTCCCCTATCGAGCTTGAGAATTGAGATCTTATCCTAGTGTTGGGACAGCTTCTTATTACTCTAGGATCAATGATTCGTTCCTCGTGACTTCAAAGTTTTTGTGTGGAAATTGAATTCTGTGGCGTGATTTATGATCTGATTCGGTTCTGGAAATGGTTAATGTTGGTGGACCTTTTCTTTTTCTTATTTTTTCTCTTTACAATTTTAGCATTTATAAGAGCTGAAATTAGTTATGGGGACTTCTTGGGATTTGAAATGGTTGAAGGAAATGATGATTTTTCCCTGCAAATGTTCTAACTTCTAAGCGAATCCCCATTGAGAGTCATGTTCTTAACGTCATGATAGGGAACAAGTAATCAAGTTGAGGCTTAGTTGCAATGATGCTTGCATTTTGGAGTTCTATTAACACCAATATAGCCTGTTCGTGAAAATATATATTTTTCAATGTGGGTTCATCCTTTATTTTCTCAATACATAAATCACGTTGATTTGAAATGAAGTAAAAAGAAAACTTCTTATGTGATTCAAGTATCGTGCTCCTTTTTTATGAGGAATTCTTTTATTCGATTCATATGCAGGAATGTATAATAATGTTGAAGCCCAGCCCGCAGCTCCGAAGCCTCCAGCAAGCTCTCAGCCAAATCCATTTGGAAATGCATTTTATGGTGCTGGATCTGGACTAATTCGAGGTGGATTGGGTGCATATGGAGAGAAAATATTTGGGTCAAGCTCAGAGTATGTTCAAAGCAATGTGAGTACTATTTCCTATGTAAATTTATCACCAACCAAGATTTCTATTTTACTTTTACTTTTATTTTTATTTTTATAGGAATATAACTTTCATTGTGAAAATTTGAAAGAATACCAGGGCATAACAAACATTTTTTTAACAAATATAAATGTAGCGTTTTTCCTTATTTCTCAATTGGGGTGGTTTTTCTGCAATACAAATGGGGAGAGGATGGGAAAGATTATTATCTTTTTACCTAATCAATGAAAACATTGAGGAAGATTAACGATAAAAATTTTTGTATATATTTTTTTTGAACAAGGAGCGAACTTTTCATTGATAGATGAAAAGGAAAAAAAAAAAAGAATTCAGGTGTACGACCTCCCAAATGGAGAGAGTAAACTACCTAGGAAACAACAAAACACCAAAAATACAAGAGCCTAAAAAAACAACTGAAAAGAGGACTCCAATAGGCCAAAACACCAAACCAAACAGCAAAAACCACACCATAATGGCACAAAAGAGAGAGACTTCAAGTAAGAAGACTGAAATATCATTATGCTTCCCATACATTACTGTTATCTTTATCTCCTTCCAAGATGATGTAAATGACTCTCTTTCATTGTTAAAACCTTGCAAGAAGGATGAAGACCTTTTAACAATTGGGGGCTTTGAAATTCTTAAGCTTGTGCCTAAACTTTTTGGTTCTCAGATGACTGAAGGAATTTAGCTTCTTCTTCTTCTTTCTAATTTTTTTATTTAAATTAATTAATTATGATTTTTTAATTATTATTATTGCGATGGACAGATAAGTAGGTACTTTTCAGATCCCCAATACTACTTCCAAGTGAACGACCAGTATGTTAGAAATAAATTGAAGGTTGTCCTATTTCCATTTCTACACAGGGTATGTACCAGTCTTTTAATTTCTCCCTTGATGATTTTTGTTGTCCTTACTCACTCCTTACTCTATGAAAGAATACCCTTATCGTCTTGCTTTTTTTTCAGGGCCACTGGACACGAATAACTGATCCAATTGGGGGCAGACTATCGTATAAGCCACCAATTTATGACATCAATGCACCAGACTTGTACATTCCATTCATGGCCTTTGGCACCTATGTTGTTCTTGCAGGCTTCTCACTTGGTCTTCAAGGAAAGTGAGTGCAAATACGTTTTTGGTGTACCATTATTATAACCTTTTATTTTAAAGATGAGACTATAATTTCATGCCCCTCCCCCCCTGCCCGCAAAAAAAACCCAACTGTTAGTTTTTTTTTTTTTTTGGGATAGGGAGCAGATTATGAAATGAGGTTTTTATAGGTTAGTGGTTGTGGTTACTTCATGGGGTTCAAAATCAACATGCATTCCTAGGGAGAAGCGGTGTTAGGATTTGGACCTCAATCCTTCTAGGGGTTTCTCTTGCAATTATTTTTTGTCTACTCCTTCTCCACAAGTAGCCTTTGATTGGTTGCTTTGGAGCTGTGGGTTTGCGATGTTTTTGTGGAGCCACTTTTTTGAGGAGTTTGGTTTGGTGCATGCTTGTGAGAGGGATGCTAAAGACTTGATTGGGAGTTCCTCCTCAATTCTCTTTTTCTTGAGAAGGGATGGTTCTTGTGGCTTGCTGGGGTGTGCACTCTGTTATGGTATATTTGGGATGATAATAATATTGAAGTCTTTTAGGGGTGTGGGAAGGGACCCGTGTGATCTTTGGTGCTTGATGAGGTTTGTTTTTCTTTGGGGTTTGGCATTTTAAATTATTAGGCAGTATTGAACTTAGTTGGATCCTTTTTTTCGTTTGGGGGGGGACTTGGTTTTTTAGCATGCCCTTATTTTCTTTTTGGAATGGGAGTAGTTCCTATTGAAAAAAAACCCATGAATTGTCATCGAAGGCACTCTTCAATCCATGTACTCACAATAGTAAATTATTTGTAGTCAGTAGGGGGGAGAACCTTGATTATATGCCTTGGGCTTGCGAGTATAATCAATATCTCTTGAGACTCATGAGCTTGTTTGGTTTATGTTGGGGCCAAAGTAGAGAGCGTAGATTTACGGTGGAGGTGGAGGTGGTGTGCGAATTCTTCATTTTGGAAGAAGGGTAAAATGTTGTTGCACGCTAGTTTCTTTTGCTATTCTCTGAGACATTTGTCTTGAGAAGAATAGTATGATATTTAGAGAGATGGAGAAATTACACAAGATTATTTTGTAATTAAAATCCTCTATTAACTAATCATTGGAGGGCTCTCATTTCTTAGTTTTGCGGGAGGGGGTTTTCTCAACCCTCTGCCCTTAGGTTGTTCTTTTTGGTTCTTTTGATGAATAAGCATCTCCGTTTCTTATATGTAAAAAAAGAACAGAGCTGAGAGATTAAGTGAGGATGATTGAGAGGCTGCAAGATTTAATGTCTCTTTGTGGGAATCACTTGAATGACTTTATTTAATTAAGCTAATTTTTATTTAGTTGGATTTATTCTTTTTGCGGGTTTAGACTTCATTTATCTCTTCTCGCCCTTGTTTATGCTTTCATTTCTCCCAATGGAAGCTTAATTTATTACCTATTTTTTTAAAACCTTCTTGGAACCAAAGTCTTATTGGATGAGAGAAACTAGACAAGATAAGATGGAGAAAGAGAAACCAAAAGAGCTTGAAGGATTAGGATTCCATAAGCGATCATTCTAGATGCACTAAAAACTATAACCTCAAAAATAAAGAGATCAAGGAAGAAACATTTGAACTTTGCTTTTTCTAAGCTTCCCTATAAAGAGAAACCAAAAGAGCTTGAAGGATTAGGATTCCATAAGCGATCATTCTAGATGCACTAAAAACTATAACCTAAAAAATAAAGAGATCAAGGAAGAAACATTTGAACTTTGCTTTTTCTAAGCTTCCCTATTTGATAAGCCTTAAACTATATTTGAAAAAGTGGAACGAAGACTACAGTCATGGAATCACTTACACATTTCCAAAGGCAGTCATCTTACCCTTCTACTAGCCACAAAATTTCCTACATATTGTTCCTATACAAGATCCTCACCAAGGTTAGTACTATCATAGAAAAACCATACAGATCCTTTTTGTGAAAAAGGGGTAACAACCAAAATGGGATGAATCTTGTTAGATGAGACAAAATTATCAAGCCTCTCTCACATGGTTGACTGGGCATACAAGGCATTGGAGACAAAAACAGGGCTCTTCTTCCTAAATGGATTTCAGGATACTACCACAAAGGAGTTGCTTTATGGAAACAAATATTATTGATGCTAAAATATGGTGAGCATACTGACTCTTCTTGGCCCAACACTTCTTTCCCAGATCATATTGAAGGTCCATGGAGAACCATCCTGTCTCATTTAAACCTTATCGAAGAGAGGGTTTCTATCAAAGTTGGGAATGGCAACCGTGCCTCTTTTTGGCATAACCATTGGATCAATGAAGCCCCTATATCGAACCTTTTTCCTCGACTATGCACTTTGGCTGCATACAAGCAGTCCACTGTGAACAATTTTTGGGATGAACAACATGGATGGACATGGACCATCACCTACAGAAGGAACTTCAAAGAAGATGAATTTGAAGAATGGATGGCTCTCGTGTTCTTGATGGAGTTTGGTTGGCCTCCCGGAGAGAAATGAATTTGGAATCTTGATAAAAATGGTCTTTTCTCCACTAAATCATTGGCCAACAATTTGGGGCTGAGGGGGCTGCACCGAACACCTTCCTTATGGACGTGATGCTATATGGACGGATTTCTACCTAAAAAAAGTTCAATTCTTTCTCAAGGAAATTAGTCACAAATGGCCAACATGAGCTCAATTCAACTTGCATCTGTATGCTCCCGAGGACAAGAGGTCCCTGATTGAAATCCCTCCACCTTCAAATTGACTTAATAAGACCTTTTCAATACAAAGCATCCAGAGACAGTAGTAACTGCAGTCATCAACTCTTGCTTTGTCTTTAAAAAACCACACCCTATGTCGTTAACAACTCCCTTCGAATAGGTTGGATGGTGAGGCAGATTGCCTTGGGTAACTTATCCTGTAATTTCCACTGTGTCATCAGCAATTATTTATGAATTTGATACTGATTGTTTCTGATTATATTTGTGATGTGCACGTCTGCTGTTAATGTTTATTCTCATACGAGATGTATCATCAATGCATATAAAAAGGAGTAACCAACCCAAATGAATGTTCAAGTTTCAGGAATAATTCTCACGATTTCTCGATGTATGCTATATATAATATACAAATGTTTCTTTTTAACGAAATCATCATTTCTATTCTTGCATGTTTAGTATAGTAGATTATGATTTCTCTCCCCCTCTGGGATGCTCGACGAATTTGTTTCACTCTCAAACTTTGATCTGCTCATATTTGTCAGAAACCCATCTATAGCATATCTCAACTACAACTACCTACTCACACAAAATCATTCATTTCCTATAATGATCATTAATTACTATCATTTTCCTATAATGATTGTAGGTTCACTCCAGAAGCTTTGAGTTGGTTGTTCATCAAAGGATTGCTCGGTTGGTTTATGCAAGTCATGCTGCTTAAAGTAACACTACTATCACTGGGAAGTGGGGAGGCACCATTACTCGATATTGTTGCATATGCTGGATACGCGTTCACCGGACTGTGTCTGGCTGCCATCGGAAGAATATCGTTGAAATACTCGTACTATTTTCTTATGCCATGGATGGCCTTGTGCATGGGAATATTCTTGGTGAAAACGATGAAGAGAGTGCTATTTGCAGAGGTGAGGACCTATGATTCAAGCAGGCATCACTATCTATTGCTCTTTATTGCTTTGGCTCAGTTCCCACTTTTCACTTGGCTTGGTAACGTTAGTGTCAATTGGCTTATATAA

mRNA sequence

ATGTATAATAATGTTGAAGCCCAGCCCGCAGCTCCGAAGCCTCCAGCAAGCTCTCAGCCAAATCCATTTGGAAATGCATTTTATGGTGCTGGATCTGGACTAATTCGAGGTGGATTGGGTGCATATGGAGAGAAAATATTTGGGTCAAGCTCAGAGTATGTTCAAAGCAATATAAGTAGGTACTTTTCAGATCCCCAATACTACTTCCAAGTGAACGACCAGTATGTTAGAAATAAATTGAAGGTTGTCCTATTTCCATTTCTACACAGGGGCCACTGGACACGAATAACTGATCCAATTGGGGGCAGACTATCGTATAAGCCACCAATTTATGACATCAATGCACCAGACTTGTACATTCCATTCATGGCCTTTGGCACCTATGTTGTTCTTGCAGGCTTCTCACTTGGTCTTCAAGGAAAGGCTCTTCTTCCTAAATGGATTTCAGGATACTACCACAAAGGAGTTGCTTTATGGAAACAAATATTATTGATGCTAAAATATGGTGAGCATACTGACTCTTCTTGGCCCAACACTTCTTTCCCAGATCATATTGAAGGTCCATGGAGAACCATCCTGTCTCATTTAAACCTTATCGAAGAGAGGGTTTCTATCAAAGTTGGGAATGGCAACCGTGCCTCTTTTTGGCATAACCATTGGATCAATGAAGCCCCTATATCGAACCTTTTTCCTCGACTATGCACTTTGGCTGCATACAAGCAGTCCACTGTGAACAATTTTTGGGATGAACAACATGGATGGACATGGACCATCACCTACAGAAGGAACTTCAAAGAAGATGAATTTGAAGAATGGATGGCTCTCGTGTTCTTGATGGAGTTCACTCCAGAAGCTTTGAGTTGGTTGTTCATCAAAGGATTGCTCGGTTGGTTTATGCAAGTCATGCTGCTTAAAGTAACACTACTATCACTGGGAAGTGGGGAGGCACCATTACTCGATATTGTTGCATATGCTGGATACGCGTTCACCGGACTGTGTCTGGCTGCCATCGGAAGAATATCGTTGAAATACTCGTACTATTTTCTTATGCCATGGATGGCCTTGTGCATGGGAATATTCTTGGTGAAAACGATGAAGAGAGTGCTATTTGCAGAGGTGAGGACCTATGATTCAAGCAGGCATCACTATCTATTGCTCTTTATTGCTTTGGCTCAGTTCCCACTTTTCACTTGGCTTGGTAACGTTAGTGTCAATTGGCTTATATAA

Coding sequence (CDS)

ATGTATAATAATGTTGAAGCCCAGCCCGCAGCTCCGAAGCCTCCAGCAAGCTCTCAGCCAAATCCATTTGGAAATGCATTTTATGGTGCTGGATCTGGACTAATTCGAGGTGGATTGGGTGCATATGGAGAGAAAATATTTGGGTCAAGCTCAGAGTATGTTCAAAGCAATATAAGTAGGTACTTTTCAGATCCCCAATACTACTTCCAAGTGAACGACCAGTATGTTAGAAATAAATTGAAGGTTGTCCTATTTCCATTTCTACACAGGGGCCACTGGACACGAATAACTGATCCAATTGGGGGCAGACTATCGTATAAGCCACCAATTTATGACATCAATGCACCAGACTTGTACATTCCATTCATGGCCTTTGGCACCTATGTTGTTCTTGCAGGCTTCTCACTTGGTCTTCAAGGAAAGGCTCTTCTTCCTAAATGGATTTCAGGATACTACCACAAAGGAGTTGCTTTATGGAAACAAATATTATTGATGCTAAAATATGGTGAGCATACTGACTCTTCTTGGCCCAACACTTCTTTCCCAGATCATATTGAAGGTCCATGGAGAACCATCCTGTCTCATTTAAACCTTATCGAAGAGAGGGTTTCTATCAAAGTTGGGAATGGCAACCGTGCCTCTTTTTGGCATAACCATTGGATCAATGAAGCCCCTATATCGAACCTTTTTCCTCGACTATGCACTTTGGCTGCATACAAGCAGTCCACTGTGAACAATTTTTGGGATGAACAACATGGATGGACATGGACCATCACCTACAGAAGGAACTTCAAAGAAGATGAATTTGAAGAATGGATGGCTCTCGTGTTCTTGATGGAGTTCACTCCAGAAGCTTTGAGTTGGTTGTTCATCAAAGGATTGCTCGGTTGGTTTATGCAAGTCATGCTGCTTAAAGTAACACTACTATCACTGGGAAGTGGGGAGGCACCATTACTCGATATTGTTGCATATGCTGGATACGCGTTCACCGGACTGTGTCTGGCTGCCATCGGAAGAATATCGTTGAAATACTCGTACTATTTTCTTATGCCATGGATGGCCTTGTGCATGGGAATATTCTTGGTGAAAACGATGAAGAGAGTGCTATTTGCAGAGGTGAGGACCTATGATTCAAGCAGGCATCACTATCTATTGCTCTTTATTGCTTTGGCTCAGTTCCCACTTTTCACTTGGCTTGGTAACGTTAGTGTCAATTGGCTTATATAA

Protein sequence

MYNNVEAQPAAPKPPASSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFSLGLQGKALLPKWISGYYHKGVALWKQILLMLKYGEHTDSSWPNTSFPDHIEGPWRTILSHLNLIEERVSIKVGNGNRASFWHNHWINEAPISNLFPRLCTLAAYKQSTVNNFWDEQHGWTWTITYRRNFKEDEFEEWMALVFLMEFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWMALCMGIFLVKTMKRVLFAEVRTYDSSRHHYLLLFIALAQFPLFTWLGNVSVNWLI

Homology

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BLAST of CsaV3_4G003750 vs. NCBI nr
Match: XP_004152088.1 (PREDICTED: protein YIF1B [Cucumis sativus] >KGN53120.1 hypothetical protein Csa_4G017080 [Cucumis sativus])

HSP 1 Score: 486.1 bits (1250), Expect = 1.2e-133
Identity = 269/408 (65.93%), Postives = 269/408 (65.93%), Query Frame = 0


Query: 1   MYNNVEAQPAAPKPPASSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60
           MYNNVEAQPAAPKPPASSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR
Sbjct: 1   MYNNVEAQPAAPKPPASSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60

Query: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120
           YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120

Query: 121 PFMAFGTYVVLAGFSLGLQGKALLPKWISGYYHKGVALWKQILLMLKYGEHTDSSWPNTS 180
           PFMAFGTYVVLAGFSLGLQGK                                       
Sbjct: 121 PFMAFGTYVVLAGFSLGLQGK--------------------------------------- 180

Query: 181 FPDHIEGPWRTILSHLNLIEERVSIKVGNGNRASFWHNHWINEAPISNLFPRLCTLAAYK 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 QSTVNNFWDEQHGWTWTITYRRNFKEDEFEEWMALVFLMEFTPEALSWLFIKGLLGWFMQ 300
                                                   FTPEALSWLFIKGLLGWFMQ
Sbjct: 241 ----------------------------------------FTPEALSWLFIKGLLGWFMQ 269

Query: 301 VMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWMALCMGIF 360
           VMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWMALCMGIF
Sbjct: 301 VMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWMALCMGIF 269

Query: 361 LVKTMKRVLFAEVRTYDSSRHHYLLLFIALAQFPLFTWLGNVSVNWLI 409
           LVKTMKRVLFAEVRTYDSSRHHYLLLFIALAQFPLFTWLGNVSVNWLI
Sbjct: 361 LVKTMKRVLFAEVRTYDSSRHHYLLLFIALAQFPLFTWLGNVSVNWLI 269

[Close]

BLAST of CsaV3_4G003750 vs. NCBI nr
Match: XP_008453934.1 (PREDICTED: protein YIF1B [Cucumis melo])

HSP 1 Score: 482.3 bits (1240), Expect = 1.7e-132
Identity = 266/408 (65.20%), Postives = 269/408 (65.93%), Query Frame = 0


Query: 1   MYNNVEAQPAAPKPPASSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60
           MYNNVEAQPAAPKPP+SSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR
Sbjct: 1   MYNNVEAQPAAPKPPSSSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60

Query: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120
           YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120

Query: 121 PFMAFGTYVVLAGFSLGLQGKALLPKWISGYYHKGVALWKQILLMLKYGEHTDSSWPNTS 180
           PFMAFGTYVVLAGFSLGLQGK                                       
Sbjct: 121 PFMAFGTYVVLAGFSLGLQGK--------------------------------------- 180

Query: 181 FPDHIEGPWRTILSHLNLIEERVSIKVGNGNRASFWHNHWINEAPISNLFPRLCTLAAYK 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 QSTVNNFWDEQHGWTWTITYRRNFKEDEFEEWMALVFLMEFTPEALSWLFIKGLLGWFMQ 300
                                                   FTPEALSWLFIKGLLGWFMQ
Sbjct: 241 ----------------------------------------FTPEALSWLFIKGLLGWFMQ 269

Query: 301 VMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWMALCMGIF 360
           VMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRI+LKYSYYFLMPWMALCMGIF
Sbjct: 301 VMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRITLKYSYYFLMPWMALCMGIF 269

Query: 361 LVKTMKRVLFAEVRTYDSSRHHYLLLFIALAQFPLFTWLGNVSVNWLI 409
           LVKTMKRVLFAEVR+YDSSRHHYLLLFIALAQFPLFTWLGNVSVNWLI
Sbjct: 361 LVKTMKRVLFAEVRSYDSSRHHYLLLFIALAQFPLFTWLGNVSVNWLI 269

[Close]

BLAST of CsaV3_4G003750 vs. NCBI nr
Match: XP_022956207.1 (protein YIF1B-like [Cucurbita moschata] >XP_022979905.1 protein YIF1B-like [Cucurbita maxima] >XP_023528982.1 protein YIF1B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 474.2 bits (1219), Expect = 4.6e-130
Identity = 263/408 (64.46%), Postives = 265/408 (64.95%), Query Frame = 0


Query: 1   MYNNVEAQPAAPKPPASSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60
           MYNNVEAQ  APKPP+SSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR
Sbjct: 1   MYNNVEAQSVAPKPPSSSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60

Query: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120
           YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120

Query: 121 PFMAFGTYVVLAGFSLGLQGKALLPKWISGYYHKGVALWKQILLMLKYGEHTDSSWPNTS 180
           P MAFGTYVVLAGFSLGLQGK                                       
Sbjct: 121 PLMAFGTYVVLAGFSLGLQGK--------------------------------------- 180

Query: 181 FPDHIEGPWRTILSHLNLIEERVSIKVGNGNRASFWHNHWINEAPISNLFPRLCTLAAYK 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 QSTVNNFWDEQHGWTWTITYRRNFKEDEFEEWMALVFLMEFTPEALSWLFIKGLLGWFMQ 300
                                                   FTPEALSWLFIKGLLGWFMQ
Sbjct: 241 ----------------------------------------FTPEALSWLFIKGLLGWFMQ 269

Query: 301 VMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWMALCMGIF 360
           VMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPW ALCMGIF
Sbjct: 301 VMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIF 269

Query: 361 LVKTMKRVLFAEVRTYDSSRHHYLLLFIALAQFPLFTWLGNVSVNWLI 409
           LVKTMKRVLFAEVR+YDSSRHHYLLLFIALAQFPLFTWLGNVSVNWLI
Sbjct: 361 LVKTMKRVLFAEVRSYDSSRHHYLLLFIALAQFPLFTWLGNVSVNWLI 269

[Close]

BLAST of CsaV3_4G003750 vs. NCBI nr
Match: XP_022138088.1 (protein YIF1B-like [Momordica charantia])

HSP 1 Score: 473.0 bits (1216), Expect = 1.0e-129
Identity = 262/408 (64.22%), Postives = 266/408 (65.20%), Query Frame = 0


Query: 1   MYNNVEAQPAAPKPPASSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60
           MY+NVEAQ AAPKPP+SSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR
Sbjct: 1   MYSNVEAQSAAPKPPSSSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60

Query: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120
           YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120

Query: 121 PFMAFGTYVVLAGFSLGLQGKALLPKWISGYYHKGVALWKQILLMLKYGEHTDSSWPNTS 180
           P MAFGTYVVLAGFSLGLQGK                                       
Sbjct: 121 PLMAFGTYVVLAGFSLGLQGK--------------------------------------- 180

Query: 181 FPDHIEGPWRTILSHLNLIEERVSIKVGNGNRASFWHNHWINEAPISNLFPRLCTLAAYK 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 QSTVNNFWDEQHGWTWTITYRRNFKEDEFEEWMALVFLMEFTPEALSWLFIKGLLGWFMQ 300
                                                   FTPEALSWLFIKGLLGWFMQ
Sbjct: 241 ----------------------------------------FTPEALSWLFIKGLLGWFMQ 269

Query: 301 VMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWMALCMGIF 360
           VMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRIS+KYSYYFLMPW ALCMGIF
Sbjct: 301 VMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISMKYSYYFLMPWTALCMGIF 269

Query: 361 LVKTMKRVLFAEVRTYDSSRHHYLLLFIALAQFPLFTWLGNVSVNWLI 409
           LVKTMKRVLFAEVR+YDSSRHHYLLLFIALAQFPLFTWLGNVSVNWLI
Sbjct: 361 LVKTMKRVLFAEVRSYDSSRHHYLLLFIALAQFPLFTWLGNVSVNWLI 269

[Close]

BLAST of CsaV3_4G003750 vs. NCBI nr
Match: XP_022932593.1 (protein YIF1B-like [Cucurbita moschata] >XP_022933326.1 protein YIF1B-like isoform X1 [Cucurbita moschata] >XP_022972263.1 protein YIF1B-like [Cucurbita maxima])

HSP 1 Score: 468.4 bits (1204), Expect = 2.5e-128
Identity = 262/408 (64.22%), Postives = 263/408 (64.46%), Query Frame = 0


Query: 1   MYNNVEAQPAAPKPPASSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60
           MYNNVEAQ AA KP  SSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR
Sbjct: 1   MYNNVEAQSAASKPLPSSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60

Query: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120
           YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120

Query: 121 PFMAFGTYVVLAGFSLGLQGKALLPKWISGYYHKGVALWKQILLMLKYGEHTDSSWPNTS 180
           PFMAFGTYVVLAGFSLGLQGK                                       
Sbjct: 121 PFMAFGTYVVLAGFSLGLQGK--------------------------------------- 180

Query: 181 FPDHIEGPWRTILSHLNLIEERVSIKVGNGNRASFWHNHWINEAPISNLFPRLCTLAAYK 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 QSTVNNFWDEQHGWTWTITYRRNFKEDEFEEWMALVFLMEFTPEALSWLFIKGLLGWFMQ 300
                                                   FTPEALSWLFIKGLLGWFMQ
Sbjct: 241 ----------------------------------------FTPEALSWLFIKGLLGWFMQ 269

Query: 301 VMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWMALCMGIF 360
           VMLLKVTLLSLG GEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPW ALCMGIF
Sbjct: 301 VMLLKVTLLSLGCGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIF 269

Query: 361 LVKTMKRVLFAEVRTYDSSRHHYLLLFIALAQFPLFTWLGNVSVNWLI 409
           LVKTMKRVLFAEVR+YDSSRHHYLLLFIALAQFPLFTWLGNVSVNWLI
Sbjct: 361 LVKTMKRVLFAEVRSYDSSRHHYLLLFIALAQFPLFTWLGNVSVNWLI 269

[Close]

BLAST of CsaV3_4G003750 vs. TAIR10
Match: AT1G30890.1 (Integral membrane HRF1 family protein)

HSP 1 Score: 389.0 bits (998), Expect = 3.5e-108
Identity = 216/408 (52.94%), Postives = 234/408 (57.35%), Query Frame = 0


Query: 1   MYNNVEAQPAAPKPPASSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60
           MYNN+  QP  P+PP + +          AGSG IRGGLGAYGE+I GSSSEYVQSNISR
Sbjct: 1   MYNNMGPQPGMPRPPGNPEXXXXXXXXXXAGSGFIRGGLGAYGERILGSSSEYVQSNISR 60

Query: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120
           YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRI++P+GGRLSYKPPIYDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRISEPVGGRLSYKPPIYDINAPDLYI 120

Query: 121 PFMAFGTYVVLAGFSLGLQGKALLPKWISGYYHKGVALWKQILLMLKYGEHTDSSWPNTS 180
           PFMAFGTYVVLAG SLGL GK                                       
Sbjct: 121 PFMAFGTYVVLAGLSLGLNGK--------------------------------------- 180

Query: 181 FPDHIEGPWRTILSHLNLIEERVSIKVGNGNRASFWHNHWINEAPISNLFPRLCTLAAYK 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 QSTVNNFWDEQHGWTWTITYRRNFKEDEFEEWMALVFLMEFTPEALSWLFIKGLLGWFMQ 300
                                                   FTPEAL+WLF+KGL+GWF+Q
Sbjct: 241 ----------------------------------------FTPEALNWLFVKGLVGWFLQ 269

Query: 301 VMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWMALCMGIF 360
           VMLLKVTLLSLGSGEAPLLDIVAY GYAF GLCLA   +I   YSYY LMPW  LC GIF
Sbjct: 301 VMLLKVTLLSLGSGEAPLLDIVAYGGYAFAGLCLAGFAKIMWGYSYYALMPWTCLCTGIF 269

Query: 361 LVKTMKRVLFAEVRTYDSSRHHYLLLFIALAQFPLFTWLGNVSVNWLI 409
           LVKTMKRVLFAEVR+YDSS+HHYLLLF+AL QFPL  WLGN+SVNWL+
Sbjct: 361 LVKTMKRVLFAEVRSYDSSKHHYLLLFLALVQFPLLIWLGNISVNWLL 269

[Close]

BLAST of CsaV3_4G003750 vs. TAIR10
Match: AT3G59500.1 (Integral membrane HRF1 family protein)

HSP 1 Score: 367.1 bits (941), Expect = 1.4e-101
Identity = 206/407 (50.61%), Postives = 226/407 (55.53%), Query Frame = 0


Query: 1   MYNNVEAQPAAPKPPASSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60
           MYNN+  +P    P                   LIR GLGAYGEKIFGSSSEYVQSNISR
Sbjct: 1   MYNNMGPRPGMAMPXXXXXXXXXXXXXXXXXXXLIRSGLGAYGEKIFGSSSEYVQSNISR 60

Query: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120
           YFSDPQYYFQVNDQYVRNKLK+VL PFLHRGHWTRI++P+GGRLSYKPPIYDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKIVLLPFLHRGHWTRISEPVGGRLSYKPPIYDINAPDLYI 120

Query: 121 PFMAFGTYVVLAGFSLGLQGKALLPKWISGYYHKGVALWKQILLMLKYGEHTDSSWPNTS 180
           P MAFGTYVVLAG SLGL GK                                       
Sbjct: 121 PLMAFGTYVVLAGLSLGLYGK--------------------------------------- 180

Query: 181 FPDHIEGPWRTILSHLNLIEERVSIKVGNGNRASFWHNHWINEAPISNLFPRLCTLAAYK 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 QSTVNNFWDEQHGWTWTITYRRNFKEDEFEEWMALVFLMEFTPEALSWLFIKGLLGWFMQ 300
                                                   FTPEAL+WLF+KG++GWF+Q
Sbjct: 241 ----------------------------------------FTPEALNWLFVKGMVGWFLQ 268

Query: 301 VMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWMALCMGIF 360
           VMLLK+TLLSLGSGEAPLLDIVAYAGY FTGLCLA +G+I   YSYY L+PW  LC G+F
Sbjct: 301 VMLLKITLLSLGSGEAPLLDIVAYAGYTFTGLCLAVLGKIIWGYSYYVLIPWTCLCTGVF 268

Query: 361 LVKTMKRVLFAEVRTYDSSRHHYLLLFIALAQFPLFTWLGNVSVNWL 408
           LVKTMKRVLFAE R+YDSSRHHYLL+F+ALAQFPL  WLGN+SVNWL
Sbjct: 361 LVKTMKRVLFAESRSYDSSRHHYLLIFVALAQFPLLIWLGNISVNWL 268

[Close]

BLAST of CsaV3_4G003750 vs. Swiss-Prot
Match: sp|Q6PEC3|YIF1B_RAT (Protein YIF1B OS=Rattus norvegicus OX=10116 GN=Yif1b PE=2 SV=2)

HSP 1 Score: 76.3 bits (186), Expect = 9.1e-13
Identity = 43/107 (40.19%), Postives = 61/107 (57.01%), Query Frame = 0


Query: 41  AYGEKIFGSSSEYVQSNISRYF--SDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITD 100
           AYG  +     E V  NI R+   S  +YYF V+  YV  KL +++FP+LH+    +   
Sbjct: 80  AYGSSLAAQGKELVDKNIDRFIPVSKLKYYFAVDTVYVGKKLGLLVFPYLHQDWEVQYQQ 139

Query: 101 --PIGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFSLGLQGKAL 144
             P+        P +DINAPDLYIP MAF TY+++AG +LG Q + +
Sbjct: 140 DTPVA-------PRFDINAPDLYIPAMAFITYILVAGLALGTQDRMI 179

[Close]

BLAST of CsaV3_4G003750 vs. Swiss-Prot
Match: sp|Q6GN58|YF1BA_XENLA (Protein YIF1B-A OS=Xenopus laevis OX=8355 GN=yif1b-a PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.6e-12
Identity = 41/105 (39.05%), Postives = 59/105 (56.19%), Query Frame = 0


Query: 41  AYGEKIFGSSSEYVQSNISRYF--SDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITD 100
           AYG  +     E +  NI R    S  +YYF V+  YV  K+ +++FP++H+    R   
Sbjct: 69  AYGSSLASQGKEMMDKNIDRIIPVSKIKYYFAVDTVYVGKKIGLLMFPYMHQDWEVRYQQ 128

Query: 101 --PIGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFSLGLQGK 142
             P+        P +DINAPDLYIP MAF TY+++AG +LG Q +
Sbjct: 129 DTPVA-------PRFDINAPDLYIPVMAFVTYILVAGLALGTQSR 166

[Close]

BLAST of CsaV3_4G003750 vs. Swiss-Prot
Match: sp|Q4FZQ0|YF1BB_XENLA (Protein YIF1B-B OS=Xenopus laevis OX=8355 GN=yif1b-b PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 3.5e-12
Identity = 41/105 (39.05%), Postives = 59/105 (56.19%), Query Frame = 0


Query: 41  AYGEKIFGSSSEYVQSNISRYF--SDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITD 100
           AYG  +     E +  NI R    S  +YYF V+  YV  K+ +++FP++H+    R   
Sbjct: 69  AYGSSLASQGKEMMDKNIDRIIPVSKIKYYFAVDTVYVGKKIGLLMFPYMHQDWEVRYQQ 128

Query: 101 --PIGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFSLGLQGK 142
             P+        P +DINAPDLYIP MAF TY+++AG +LG Q +
Sbjct: 129 DTPVA-------PRFDINAPDLYIPVMAFITYILVAGLALGTQSR 166

[Close]

BLAST of CsaV3_4G003750 vs. Swiss-Prot
Match: sp|Q6P301|YIF1B_XENTR (Protein YIF1B OS=Xenopus tropicalis OX=8364 GN=yif1b PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 3.5e-12
Identity = 41/105 (39.05%), Postives = 59/105 (56.19%), Query Frame = 0


Query: 41  AYGEKIFGSSSEYVQSNISRYF--SDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITD 100
           AYG  +     E +  NI R    S  +YYF V+  YV  K+ +++FP++H+    R   
Sbjct: 69  AYGSSLASQGKEMMDKNIDRIIPVSKIKYYFAVDTVYVGKKIGLLMFPYMHQDWEVRYQQ 128

Query: 101 --PIGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFSLGLQGK 142
             P+        P +DINAPDLYIP MAF TY+++AG +LG Q +
Sbjct: 129 DTPVA-------PRFDINAPDLYIPVMAFITYILVAGLALGTQSR 166

[Close]

BLAST of CsaV3_4G003750 vs. Swiss-Prot
Match: sp|Q5BJH7|YIF1B_HUMAN (Protein YIF1B OS=Homo sapiens OX=9606 GN=YIF1B PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 4.5e-12
Identity = 48/136 (35.29%), Postives = 68/136 (50.00%), Query Frame = 0


Query: 10  AAPKPPASSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISRY--FSDPQY 69
           A+P P A+   +P  N               AYG  +     E V  NI R+   +  +Y
Sbjct: 64  ASPTPHAAFLADPVSNMAM------------AYGSSLAAQGKELVDKNIDRFIPITKLKY 123

Query: 70  YFQVNDQYVRNKLKVVLFPFLHRGHWTRITD--PIGGRLSYKPPIYDINAPDLYIPFMAF 129
           YF V+  YV  KL ++ FP+LH+    +     P+        P +D+NAPDLYIP MAF
Sbjct: 124 YFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQDTPVA-------PRFDVNAPDLYIPAMAF 180

Query: 130 GTYVVLAGFSLGLQGK 142
            TYV++AG +LG Q +
Sbjct: 184 ITYVLVAGLALGTQDR 180

[Close]

BLAST of CsaV3_4G003750 vs. TrEMBL
Match: tr|A0A0A0KU13|A0A0A0KU13_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G017080 PE=4 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 7.7e-134
Identity = 269/408 (65.93%), Postives = 269/408 (65.93%), Query Frame = 0


Query: 1   MYNNVEAQPAAPKPPASSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60
           MYNNVEAQPAAPKPPASSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR
Sbjct: 1   MYNNVEAQPAAPKPPASSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60

Query: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120
           YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120

Query: 121 PFMAFGTYVVLAGFSLGLQGKALLPKWISGYYHKGVALWKQILLMLKYGEHTDSSWPNTS 180
           PFMAFGTYVVLAGFSLGLQGK                                       
Sbjct: 121 PFMAFGTYVVLAGFSLGLQGK--------------------------------------- 180

Query: 181 FPDHIEGPWRTILSHLNLIEERVSIKVGNGNRASFWHNHWINEAPISNLFPRLCTLAAYK 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 QSTVNNFWDEQHGWTWTITYRRNFKEDEFEEWMALVFLMEFTPEALSWLFIKGLLGWFMQ 300
                                                   FTPEALSWLFIKGLLGWFMQ
Sbjct: 241 ----------------------------------------FTPEALSWLFIKGLLGWFMQ 269

Query: 301 VMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWMALCMGIF 360
           VMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWMALCMGIF
Sbjct: 301 VMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWMALCMGIF 269

Query: 361 LVKTMKRVLFAEVRTYDSSRHHYLLLFIALAQFPLFTWLGNVSVNWLI 409
           LVKTMKRVLFAEVRTYDSSRHHYLLLFIALAQFPLFTWLGNVSVNWLI
Sbjct: 361 LVKTMKRVLFAEVRTYDSSRHHYLLLFIALAQFPLFTWLGNVSVNWLI 269

[Close]

BLAST of CsaV3_4G003750 vs. TrEMBL
Match: tr|A0A1S3BYN0|A0A1S3BYN0_CUCME (protein YIF1B OS=Cucumis melo OX=3656 GN=LOC103494509 PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.1e-132
Identity = 266/408 (65.20%), Postives = 269/408 (65.93%), Query Frame = 0


Query: 1   MYNNVEAQPAAPKPPASSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60
           MYNNVEAQPAAPKPP+SSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR
Sbjct: 1   MYNNVEAQPAAPKPPSSSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60

Query: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120
           YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120

Query: 121 PFMAFGTYVVLAGFSLGLQGKALLPKWISGYYHKGVALWKQILLMLKYGEHTDSSWPNTS 180
           PFMAFGTYVVLAGFSLGLQGK                                       
Sbjct: 121 PFMAFGTYVVLAGFSLGLQGK--------------------------------------- 180

Query: 181 FPDHIEGPWRTILSHLNLIEERVSIKVGNGNRASFWHNHWINEAPISNLFPRLCTLAAYK 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 QSTVNNFWDEQHGWTWTITYRRNFKEDEFEEWMALVFLMEFTPEALSWLFIKGLLGWFMQ 300
                                                   FTPEALSWLFIKGLLGWFMQ
Sbjct: 241 ----------------------------------------FTPEALSWLFIKGLLGWFMQ 269

Query: 301 VMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWMALCMGIF 360
           VMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRI+LKYSYYFLMPWMALCMGIF
Sbjct: 301 VMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRITLKYSYYFLMPWMALCMGIF 269

Query: 361 LVKTMKRVLFAEVRTYDSSRHHYLLLFIALAQFPLFTWLGNVSVNWLI 409
           LVKTMKRVLFAEVR+YDSSRHHYLLLFIALAQFPLFTWLGNVSVNWLI
Sbjct: 361 LVKTMKRVLFAEVRSYDSSRHHYLLLFIALAQFPLFTWLGNVSVNWLI 269

[Close]

BLAST of CsaV3_4G003750 vs. TrEMBL
Match: tr|M5WUV6|M5WUV6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G156000 PE=4 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.0e-122
Identity = 246/408 (60.29%), Postives = 256/408 (62.75%), Query Frame = 0


Query: 1   MYNNVEAQPAAPKPPASSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60
           MYNNV AQP  P PPA+SQPNPFGN FYGAGSGLIRGGLGAYGEKI GSSSEYVQSNISR
Sbjct: 1   MYNNVGAQPGVPIPPATSQPNPFGNTFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNISR 60

Query: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120
           YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRIT+P+GGRLSYKPPIYDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYI 120

Query: 121 PFMAFGTYVVLAGFSLGLQGKALLPKWISGYYHKGVALWKQILLMLKYGEHTDSSWPNTS 180
           PFMAFGTYVVLAGFSLGLQGK                                       
Sbjct: 121 PFMAFGTYVVLAGFSLGLQGK--------------------------------------- 180

Query: 181 FPDHIEGPWRTILSHLNLIEERVSIKVGNGNRASFWHNHWINEAPISNLFPRLCTLAAYK 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 QSTVNNFWDEQHGWTWTITYRRNFKEDEFEEWMALVFLMEFTPEALSWLFIKGLLGWFMQ 300
                                                   F+PEAL+WLFIKGLLGWFMQ
Sbjct: 241 ----------------------------------------FSPEALNWLFIKGLLGWFMQ 269

Query: 301 VMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWMALCMGIF 360
           V LLKVTLLSLG GEAPLLD+VAYAGYAFTGLCLA +GRI L YSYYFLMPW  LCMG+F
Sbjct: 301 VALLKVTLLSLGGGEAPLLDMVAYAGYAFTGLCLAVLGRIVLSYSYYFLMPWTCLCMGVF 269

Query: 361 LVKTMKRVLFAEVRTYDSSRHHYLLLFIALAQFPLFTWLGNVSVNWLI 409
           LVKTMKRVLFAEVR+YDSS+HHYLLLFIALAQFPLFTWLGNVSVNWLI
Sbjct: 361 LVKTMKRVLFAEVRSYDSSKHHYLLLFIALAQFPLFTWLGNVSVNWLI 269

[Close]

BLAST of CsaV3_4G003750 vs. TrEMBL
Match: tr|A0A2P5CSI4|A0A2P5CSI4_PARAD (Yif1 family OS=Parasponia andersonii OX=3476 GN=PanWU01x14_127490 PE=4 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 2.0e-121
Identity = 245/408 (60.05%), Postives = 254/408 (62.25%), Query Frame = 0


Query: 1   MYNNVEAQPAAPKPPASSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60
           MYNNV AQP   +PPA+SQPNPFGNAFYGAGSGLIRGGLGAYGEKI GSSSEYVQSNISR
Sbjct: 9   MYNNVGAQPGVSRPPANSQPNPFGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNISR 68

Query: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120
           YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRIT+P+GGRLSYKPPIYDINAPDLYI
Sbjct: 69  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYI 128

Query: 121 PFMAFGTYVVLAGFSLGLQGKALLPKWISGYYHKGVALWKQILLMLKYGEHTDSSWPNTS 180
           PFMAFGTYVVLAGFSLGL GK                                       
Sbjct: 129 PFMAFGTYVVLAGFSLGLHGK--------------------------------------- 188

Query: 181 FPDHIEGPWRTILSHLNLIEERVSIKVGNGNRASFWHNHWINEAPISNLFPRLCTLAAYK 240
                                                                       
Sbjct: 189 ------------------------------------------------------------ 248

Query: 241 QSTVNNFWDEQHGWTWTITYRRNFKEDEFEEWMALVFLMEFTPEALSWLFIKGLLGWFMQ 300
                                                   F+PEAL+WLFIKGLLGWF+Q
Sbjct: 249 ----------------------------------------FSPEALNWLFIKGLLGWFLQ 277

Query: 301 VMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWMALCMGIF 360
           V LLKVTLLSLGSGEAPLLDIVAYAGY FTGLCLA IGR    YSYYFLMPW  LCMGIF
Sbjct: 309 VALLKVTLLSLGSGEAPLLDIVAYAGYCFTGLCLAVIGRFLWGYSYYFLMPWACLCMGIF 277

Query: 361 LVKTMKRVLFAEVRTYDSSRHHYLLLFIALAQFPLFTWLGNVSVNWLI 409
           LVKTMKRVLFAEVR+YDSSRHHYLLLFIALAQFPLFTWLGN+SVNWLI
Sbjct: 369 LVKTMKRVLFAEVRSYDSSRHHYLLLFIALAQFPLFTWLGNISVNWLI 277

[Close]

BLAST of CsaV3_4G003750 vs. TrEMBL
Match: tr|A0A2P5ESW8|A0A2P5ESW8_9ROSA (Yif1 family OS=Trema orientalis OX=63057 GN=TorRG33x02_155460 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 2.6e-121
Identity = 245/408 (60.05%), Postives = 254/408 (62.25%), Query Frame = 0


Query: 1   MYNNVEAQPAAPKPPASSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60
           MYNNV AQP   +PP +SQPNPFGNAFYGAGSGLIRGGLGAYGEKI GSSSEYVQSNISR
Sbjct: 1   MYNNVGAQPGVSRPPENSQPNPFGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNISR 60

Query: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120
           YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRIT+P+GGRLSYKPPIYDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYI 120

Query: 121 PFMAFGTYVVLAGFSLGLQGKALLPKWISGYYHKGVALWKQILLMLKYGEHTDSSWPNTS 180
           PFMAFGTYVVLAGFSLGL GK                                       
Sbjct: 121 PFMAFGTYVVLAGFSLGLHGK--------------------------------------- 180

Query: 181 FPDHIEGPWRTILSHLNLIEERVSIKVGNGNRASFWHNHWINEAPISNLFPRLCTLAAYK 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 QSTVNNFWDEQHGWTWTITYRRNFKEDEFEEWMALVFLMEFTPEALSWLFIKGLLGWFMQ 300
                                                   F+PEAL+WLFIKGLLGWF+Q
Sbjct: 241 ----------------------------------------FSPEALNWLFIKGLLGWFLQ 269

Query: 301 VMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWMALCMGIF 360
           V LLKVTLLSLGSGEAPLLDIVAYAGY FTGLCLA IGRI   YSYYFLMPW  LCMGIF
Sbjct: 301 VALLKVTLLSLGSGEAPLLDIVAYAGYCFTGLCLAVIGRILWGYSYYFLMPWACLCMGIF 269

Query: 361 LVKTMKRVLFAEVRTYDSSRHHYLLLFIALAQFPLFTWLGNVSVNWLI 409
           LVKTMKRVLFAEVR+YDSSRHHYLLLFIALAQFPLFTWLGN+SVNWLI
Sbjct: 361 LVKTMKRVLFAEVRSYDSSRHHYLLLFIALAQFPLFTWLGNISVNWLI 269

The following BLAST results are available for this feature:

BLAST of CsaV3_4G003750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152088.1	1.2e-133	65.93	PREDICTED: protein YIF1B [Cucumis sativus] >KGN53120.1 hypothetical protein Csa_...	[more]
XP_008453934.1	1.7e-132	65.20	PREDICTED: protein YIF1B [Cucumis melo]	[more]
XP_022956207.1	4.6e-130	64.46	protein YIF1B-like [Cucurbita moschata] >XP_022979905.1 protein YIF1B-like [Cucu...	[more]
XP_022138088.1	1.0e-129	64.22	protein YIF1B-like [Momordica charantia]	[more]
XP_022932593.1	2.5e-128	64.22	protein YIF1B-like [Cucurbita moschata] >XP_022933326.1 protein YIF1B-like isofo...	[more]

BLAST of CsaV3_4G003750 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G30890.1	3.5e-108	52.94	Integral membrane HRF1 family protein	[more]
AT3G59500.1	1.4e-101	50.61	Integral membrane HRF1 family protein	[more]

BLAST of CsaV3_4G003750 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6PEC3\|YIF1B_RAT	9.1e-13	40.19	Protein YIF1B OS=Rattus norvegicus OX=10116 GN=Yif1b PE=2 SV=2	[more]
sp\|Q6GN58\|YF1BA_XENLA	2.6e-12	39.05	Protein YIF1B-A OS=Xenopus laevis OX=8355 GN=yif1b-a PE=2 SV=1	[more]
sp\|Q4FZQ0\|YF1BB_XENLA	3.5e-12	39.05	Protein YIF1B-B OS=Xenopus laevis OX=8355 GN=yif1b-b PE=2 SV=1	[more]
sp\|Q6P301\|YIF1B_XENTR	3.5e-12	39.05	Protein YIF1B OS=Xenopus tropicalis OX=8364 GN=yif1b PE=2 SV=1	[more]
sp\|Q5BJH7\|YIF1B_HUMAN	4.5e-12	35.29	Protein YIF1B OS=Homo sapiens OX=9606 GN=YIF1B PE=1 SV=1	[more]

BLAST of CsaV3_4G003750 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KU13\|A0A0A0KU13_CUCSA	7.7e-134	65.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G017080 PE=4 SV=1	[more]
tr\|A0A1S3BYN0\|A0A1S3BYN0_CUCME	1.1e-132	65.20	protein YIF1B OS=Cucumis melo OX=3656 GN=LOC103494509 PE=4 SV=1	[more]
tr\|M5WUV6\|M5WUV6_PRUPE	1.0e-122	60.29	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G156000 PE=4 SV=1	[more]
tr\|A0A2P5CSI4\|A0A2P5CSI4_PARAD	2.0e-121	60.05	Yif1 family OS=Parasponia andersonii OX=3476 GN=PanWU01x14_127490 PE=4 SV=1	[more]
tr\|A0A2P5ESW8\|A0A2P5ESW8_9ROSA	2.6e-121	60.05	Yif1 family OS=Trema orientalis OX=63057 GN=TorRG33x02_155460 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005578	Yif1_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G003750.1	CsaV3_4G003750.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005578	Yif1 family	PFAM	PF03878	YIF1	coord: 280..399 e-value: 3.1E-15 score: 56.2 coord: 41..171 e-value: 1.0E-32 score: 113.5
IPR005578	Yif1 family	PANTHER	PTHR14083	YIP1 INTERACTING FACTOR HOMOLOG YIF1 PROTEIN	coord: 274..403
IPR005578	Yif1 family	PANTHER	PTHR14083	YIP1 INTERACTING FACTOR HOMOLOG YIF1 PROTEIN	coord: 10..167
None	No IPR available	PANTHER	PTHR14083:SF6	SUBFAMILY NOT NAMED	coord: 10..167
None	No IPR available	PANTHER	PTHR14083:SF6	SUBFAMILY NOT NAMED	coord: 274..403

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_4G003750	CSPI04G03740	Wild cucumber (PI 183967)	cpicucB213
CsaV3_4G003750	CmaCh14G015000	Cucurbita maxima (Rimu)	cmacucB0298
CsaV3_4G003750	CmaCh06G016310	Cucurbita maxima (Rimu)	cmacucB0987
CsaV3_4G003750	CmoCh14G015360	Cucurbita moschata (Rifu)	cmocucB0291
CsaV3_4G003750	CmoCh06G016290	Cucurbita moschata (Rifu)	cmocucB0971
CsaV3_4G003750	Cp4.1LG03g12490	Cucurbita pepo (Zucchini)	cpecucB0767
CsaV3_4G003750	Cp4.1LG08g05720	Cucurbita pepo (Zucchini)	cpecucB1065
CsaV3_4G003750	CsGy4G003630	Cucumber (Gy14) v2	cgybcucB171
CsaV3_4G003750	Carg22443	Silver-seed gourd	carcucB0218
CsaV3_4G003750	Carg15490	Silver-seed gourd	carcucB0733
CsaV3_4G003750	MELO3C017680	Melon (DHL92) v3.5.1	cucmeB315
CsaV3_4G003750	Lsi07G000800	Bottle gourd (USVL1VR-Ls)	cuclsiB322
CsaV3_4G003750	MELO3C017680.2	Melon (DHL92) v3.6.1	cucmedB307
CsaV3_4G003750	Bhi01G002051	Wax gourd	cucwgoB383

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_4G003750	Watermelon (Charleston Gray)	cucwcgB336
CsaV3_4G003750	Watermelon (97103) v1	cucwmB324
CsaV3_4G003750	Watermelon (97103) v2	cucwmbB324
CsaV3_4G003750	Cucumber (Gy14) v1	cgycucB102