Carg15490 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg15490
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein YIF1B
Location	Cucurbita_argyrosperma_scaffold_069 : 449519 .. 453633 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTAAGCGAGGAGACCTTGACCGGAACCTTTTCGACCCCTTCCACCGTGCCACAGCAGAGCCTTCGCCGGTCCGTTTCGCACTTTCTTTTCGTCATTTTCAGCCTGTTGATCTTCCGTTCGGTCGTGTTTCTTCAGAGGTTCGCCTTTTGATTTTTTTCTTGCTTTGCTTCATTAGATTGATTTGTGCGGAATTTGGAACGTATGGTGTGTTTCATTTCCATGAATTGCGTGAATTTTTACTTGCTTCTTGCGGTATTAGCTAGTTCTTTTCCTCTGGTTTATATTCTTATCGAACTTGAGATCTCATTCTAGTGTTGTGACAGCTTCTTATTGTTTTAGGATCATAACGATTTCTTCTTTGTGAGTTCGAAGTTTTTGGGTTCAAATTGAATGTTGTGGCGCTTTTTGGGATCTGATCGGTTCTGGAAATAGTTATTATTGGAGTTTTTTTTTTCAAATTTTCTTATCATAAAGATGAGCTTAAATTGATTTTTGGTTACTTTTTAGCATTTGAGAAAGTTGAATAAAGATTTCCCTTGGAGGTTTTGTTTCCTGTAAATATTCCAAGCAAATTCCCATTGAGACACCAAATTTTAACTTCGTGATAGGTAATGAGTGATCAAATTGAGGCTTAGCTGTAACAATACTTGCAATTTTGTATAACATGCAACTTTGAAGCCATGGTGTTTGTTTCAGAGTTTTGACCATTTGTTGTGACTGCACGTTTTTCAGATTGTTGTTCTATACTGGCCACGTTTGAGTCCCGAACCTTTACTTTTTAATTAGATTGATATCTTACTTTTTTTTAAGTTTAAAATGTTTTTAATTTGTTGCTATGGTCTGTTGGTGAAAATATGTTTGAGTGCCGGCTTCATCCCTCATTTTAAGTTGAAAAAGAAATATACATATACTCGTGAGTGCTTTTTTTTGTATGTTGACCTTTTTTTTTTCCTTTCCAAATGCAGAAATGTATAATAATGTTGAAGCTCAGTCTGCAGCTTCAAAACCTCTACCAAGCTCTCAGCCAAATCCATTTGGAAATGCATTTTATGGTGCTGGATCCGGACTAATTCGAGGTGGGCTGGGTGCATATGGAGAGAAAATATTTGGATCAAGCTCAGAGTATGTTCAAAGCAATGTGAGTACTAGTTAATCTGTAAATTTATTACCATTCAAGATTTATAGTTCAAAAAAGGATATAGATTTCTATAAAAATGCAAAATCACAACTTGGTGAGTGTGGTTAGTGTTGTTTCTTCCTTGTTTGTGTTTCTTAAAATTCCATTACAATTTTTCTTACACAAGAAACACGCTATTTTTTTCTTTTTAATTAGTGAAAGGACATAAAGCTTAATGGCTAGGACTGTTTAACAATATTTCCTCTTATCTTCTTGGGGGAATATTAATGCCTTCTATGTCTGCTCAACCGTGTAAGACTTTATAAAACTACCGAATTCATATTAATTTACAAGAGCATGGAGATAGTTAACTACATATAGAACATTTTAACTTAACCATTTATACTGCCTCTTGTAATCGTTGCTTCTATCATTAAGCATCCACTCTTTCATTTCTCTCCATGAACCCAAATGAGTTGTTTGAACTGCATTTAACCTAAAGCTCCCCAGCTCTTGAAATTATTGCCAGATAGCATCTAACTTAGGTTCTTCATTGCATCTCTGTGAAAAAGTCTAATCTAGGTTGAAGCTCTATGAAGTAGAGTTCCAACATACATATGTTTCCAGTCAAGTCTTAAAGCTTTATATTATGTGCCTGTGGGGTTCCACTACTGTAACGATCTGGGTCGTTACAACTACCTTGCTTTATAAGGATCTACGACATGTTATTTTAAGGACGAGAAATGCCCTAACAAAGGAAAGCAGTTGTGTGGACCCTTTGAGAGAGTGACCACGGCAAAAACTGAACCAAGCTGTTATTTAAGCTGCCTAGAGCAGAATTCCAAGGCCATCATTTATTTTTTCATTGCCCCTTCAGTTTGTAGTTATGATCATTTCTCTGCTTTCTTCTTTCAAAGTTTTTAATGTACTTGGAGACTGAGTCGAAGAAGGTATGGAGCTATTGTTTTGTGTAATGGATTCAAAGAGGGGAGATGAAAAGCTATGACATTGAGGCATAATGTGCAGAAAACCTTTTGTGTGGAGTTCTGTTTTTAAGATATGAGAATATTCAAAGTTCTTAAGATGGCAAGAGGTTCTAGATCTAATTGAATTGCATGCCTATAGTTGGTGTGCCTTTTCTGTTATTTTACGACATAAACTTTTCAACTAATCAATGAAAGTGTTTTTTCCCCTCACCCCCGCCCCCACCCCCAAAATAAAAAATAAAAAATAAAAGAAAAGAAAATTTTATTTGTTTATATGAAGACTTGTTCATAGCTTTCTAAACATTTTTTTAATCCTTATCTCATTCATGGATGATGGACTTGATCCTCTCTTCTTTGTTAAAATCTTGCAAGTAAGATGAATACCTTCTATTGATTGGGTGCTTTGAAATTCTCAAGCATGAGCCTAAATTTTTCTGTTCTCAGATGATAGAAGGCATTTTCTTAGCCTTTTTTGAATTAGGTTTTCATTTTTTAATTTTATTTTTGCAATGGACAGATAAGTAGGTACTTTTCTGATCCTCAATACTACTTCCAAGTGAATGACCAGTATGTGAGGAATAAATTGAAGGTTGTCCTATTTCCATTTCTACACAGGGTATGTACTAATCTTATAATTTCTTGTTGATTCTGGTTGCCCCTACTCTCTCCTCATTACTCCTTACTTGGCGTATTGCTTTGTTTTAGGGCCACTGGACAAGAATAACTGACCCAATTGGAGGCAGACTTTCGTATAAGCCACCAATTTATGATATCAATGCACCAGACTTGTACATTCCGTTCATGGCTTTCGGAACTTATGTTGTTCTTGCAGGCTTCTCACTTGGTCTTCAAGGAAAGTGAGTGCAAATACGTCTTCGGGTGTACCATCATTATAATCCTTTTTTTCTTATTTTAAAACATGAGTGGAAATGACAACGATTTACAACTGAACAAAAAAGAAACATAAAACCAAAGGAGCCAAAAACTCCTTCTCAACTATTGCATGACAAGAACTGTTACATGTTCCAATCTCTCAAAAGCAGATTTACACAAAATACATATAAATCTTAGGTTATTTTATTTATAATTTTGACGCCCAATAGAAAGGCCCAAGAATATTAAGTTCTTTGCCGTGGAGATCTGCATGAGCGAACACCTTTTTGGGGCCGTAGTGGTGCTCTTTGCCAAGGTGCTTTAAGGGATCTTGACAGTATCTTTTAAAGTTGCAATTATGCTTAGTCTATGGTCTAGATTTTGGGATGTGGAGGCCAAATAGTTAATAGGCGCTCATGTTCTTCCTTTCACCTAGAGTTTCCTCTGTGACCTCAGCGGCTACTTAAGAATTCAATATTGTTTGTGGCTGATTATATTGCTGATGCGTACATGTCTTTCTTCAAGGGTACTAATGAAACTTTTGAAAGTTCAAGGGTGTATTTTAACGATTTCCATTCAACTTTGTTTTACACTTTCAACTTTTGCTGTGCTCATCTTTCTCAGATCTTCTAGTATTCGTTTCAACTAGACATTCAAGAATGAGAATTATTAACATTTTTTTTTTTTTTTCTAAAATCATTATAGGTTTACTCCAGAAGCTTTGAGTTGGTTGTTCATCAAAGGATTGCTTGGTTGGTTTATGCAAGTCATGCTGCTTAAAGTAACACTCTTATCACTAGGATGTGGGGAGGCACCATTACTCGATATCGTTGCATATGCTGGATATGCATTTACCGGATTGTGTCTAGCTGCCATCGGAAGAATATCGTTGAAATACTCTTACTATTTTCTGATGCCATGGACAGCCTTATGCATGGGAATATTCTTGGTGAAAACGATGAAGAGAGTACTATTTGCAGAAGTGAGGAGCTATGATTCAAGCAGGCATCACTATCTCTTGCTCTTCATTGCCTTGGCTCAGTTCCCACTCTTCACTTGGCTTGGCAATGTGAGTGTCAACTGGCTTATATAAGTACAATGTTTCTGTATTTTTTTTTTATTAGAAGCATGTCCTTAG

mRNA sequence

CCTAAGCGAGGAGACCTTGACCGGAACCTTTTCGACCCCTTCCACCGTGCCACAGCAGAGCCTTCGCCGGTCCGTTTCGCACTTTCTTTTCGTCATTTTCAGCCTGTTGATCTTCCGTTCGGTCGTGTTTCTTCAGAGAAATGTATAATAATGTTGAAGCTCAGTCTGCAGCTTCAAAACCTCTACCAAGCTCTCAGCCAAATCCATTTGGAAATGCATTTTATGGTGCTGGATCCGGACTAATTCGAGGTGGGCTGGGTGCATATGGAGAGAAAATATTTGGATCAAGCTCAGAGTATGTTCAAAGCAATATAAGTAGGTACTTTTCTGATCCTCAATACTACTTCCAAGTGAATGACCAGTATGTGAGGAATAAATTGAAGGTTGTCCTATTTCCATTTCTACACAGGGGCCACTGGACAAGAATAACTGACCCAATTGGAGGCAGACTTTCGTATAAGCCACCAATTTATGATATCAATGCACCAGACTTGTACATTCCGTTCATGGCTTTCGGAACTTATGTTGTTCTTGCAGGCTTCTCACTTGGTCTTCAAGGAAAGTTTACTCCAGAAGCTTTGAGTTGGTTGTTCATCAAAGGATTGCTTGGTTGGTTTATGCAAGTCATGCTGCTTAAAGTAACACTCTTATCACTAGGATGTGGGGAGGCACCATTACTCGATATCGTTGCATATGCTGGATATGCATTTACCGGATTGTGTCTAGCTGCCATCGGAAGAATATCGTTGAAATACTCTTACTATTTTCTGATGCCATGGACAGCCTTATGCATGGGAATATTCTTGGTGAAAACGATGAAGAGAGTACTATTTGCAGAAGTGAGGAGCTATGATTCAAGCAGGCATCACTATCTCTTGCTCTTCATTGCCTTGGCTCAGTTCCCACTCTTCACTTGGCTTGGCAATGTGAGTGTCAACTGGCTTATATAAGTACAATGTTTCTGTATTTTTTTTTTATTAGAAGCATGTCCTTAG

Coding sequence (CDS)

ATGTATAATAATGTTGAAGCTCAGTCTGCAGCTTCAAAACCTCTACCAAGCTCTCAGCCAAATCCATTTGGAAATGCATTTTATGGTGCTGGATCCGGACTAATTCGAGGTGGGCTGGGTGCATATGGAGAGAAAATATTTGGATCAAGCTCAGAGTATGTTCAAAGCAATATAAGTAGGTACTTTTCTGATCCTCAATACTACTTCCAAGTGAATGACCAGTATGTGAGGAATAAATTGAAGGTTGTCCTATTTCCATTTCTACACAGGGGCCACTGGACAAGAATAACTGACCCAATTGGAGGCAGACTTTCGTATAAGCCACCAATTTATGATATCAATGCACCAGACTTGTACATTCCGTTCATGGCTTTCGGAACTTATGTTGTTCTTGCAGGCTTCTCACTTGGTCTTCAAGGAAAGTTTACTCCAGAAGCTTTGAGTTGGTTGTTCATCAAAGGATTGCTTGGTTGGTTTATGCAAGTCATGCTGCTTAAAGTAACACTCTTATCACTAGGATGTGGGGAGGCACCATTACTCGATATCGTTGCATATGCTGGATATGCATTTACCGGATTGTGTCTAGCTGCCATCGGAAGAATATCGTTGAAATACTCTTACTATTTTCTGATGCCATGGACAGCCTTATGCATGGGAATATTCTTGGTGAAAACGATGAAGAGAGTACTATTTGCAGAAGTGAGGAGCTATGATTCAAGCAGGCATCACTATCTCTTGCTCTTCATTGCCTTGGCTCAGTTCCCACTCTTCACTTGGCTTGGCAATGTGAGTGTCAACTGGCTTATATAA

Protein sequence

MYNNVEAQSAASKPLPSSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGCGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDSSRHHYLLLFIALAQFPLFTWLGNVSVNWLI

Homology

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BLAST of Carg15490 vs. NCBI nr
Match: XP_022932593.1 (protein YIF1B-like [Cucurbita moschata] >XP_022933326.1 protein YIF1B-like isoform X1 [Cucurbita moschata] >XP_022972263.1 protein YIF1B-like [Cucurbita maxima])

HSP 1 Score: 544.3 bits (1401), Expect = 2.4e-151
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MYNNVEAQSAASKPLPSSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60
           MYNNVEAQSAASKPLPSSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR
Sbjct: 1   MYNNVEAQSAASKPLPSSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60

Query: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120
           YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120

Query: 121 PFMAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGCGEAPLL 180
           PFMAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGCGEAPLL
Sbjct: 121 PFMAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGCGEAPLL 180

Query: 181 DIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDSS 240
           DIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDSS
Sbjct: 181 DIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDSS 240

Query: 241 RHHYLLLFIALAQFPLFTWLGNVSVNWLI 270
           RHHYLLLFIALAQFPLFTWLGNVSVNWLI
Sbjct: 241 RHHYLLLFIALAQFPLFTWLGNVSVNWLI 269

[Close]

BLAST of Carg15490 vs. NCBI nr
Match: XP_023538665.1 (protein YIF1B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 542.7 bits (1397), Expect = 6.9e-151
Identity = 268/269 (99.63%), Postives = 268/269 (99.63%), Query Frame = 0


Query: 1   MYNNVEAQSAASKPLPSSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60
           MYNNVEAQSAASKPLPSSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR
Sbjct: 1   MYNNVEAQSAASKPLPSSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60

Query: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120
           YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120

Query: 121 PFMAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGCGEAPLL 180
           PFMAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGCGEAPLL
Sbjct: 121 PFMAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGCGEAPLL 180

Query: 181 DIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDSS 240
           DIVAYAGY FTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDSS
Sbjct: 181 DIVAYAGYVFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDSS 240

Query: 241 RHHYLLLFIALAQFPLFTWLGNVSVNWLI 270
           RHHYLLLFIALAQFPLFTWLGNVSVNWLI
Sbjct: 241 RHHYLLLFIALAQFPLFTWLGNVSVNWLI 269

[Close]

BLAST of Carg15490 vs. NCBI nr
Match: XP_022933327.1 (protein YIF1B-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 539.3 bits (1388), Expect = 7.6e-150
Identity = 269/271 (99.26%), Postives = 269/271 (99.26%), Query Frame = 0


Query: 1   MYNNVEAQSAASKPLPS--SQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNI 60
           MYNNVEAQSAASKPLPS  SQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNI
Sbjct: 1   MYNNVEAQSAASKPLPSSHSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNI 60

Query: 61  SRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDL 120
           SRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDL
Sbjct: 61  SRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDL 120

Query: 121 YIPFMAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGCGEAP 180
           YIPFMAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGCGEAP
Sbjct: 121 YIPFMAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGCGEAP 180

Query: 181 LLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYD 240
           LLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYD
Sbjct: 181 LLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYD 240

Query: 241 SSRHHYLLLFIALAQFPLFTWLGNVSVNWLI 270
           SSRHHYLLLFIALAQFPLFTWLGNVSVNWLI
Sbjct: 241 SSRHHYLLLFIALAQFPLFTWLGNVSVNWLI 271

[Close]

BLAST of Carg15490 vs. NCBI nr
Match: XP_022956207.1 (protein YIF1B-like [Cucurbita moschata] >XP_022979905.1 protein YIF1B-like [Cucurbita maxima] >XP_023528982.1 protein YIF1B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 528.9 bits (1361), Expect = 1.0e-146
Identity = 263/269 (97.77%), Postives = 263/269 (97.77%), Query Frame = 0


Query: 1   MYNNVEAQSAASKPLPSSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60
           MYNNVEAQS A KP  SSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR
Sbjct: 1   MYNNVEAQSVAPKPPSSSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60

Query: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120
           YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120

Query: 121 PFMAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGCGEAPLL 180
           P MAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLG GEAPLL
Sbjct: 121 PLMAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLL 180

Query: 181 DIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDSS 240
           DIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDSS
Sbjct: 181 DIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDSS 240

Query: 241 RHHYLLLFIALAQFPLFTWLGNVSVNWLI 270
           RHHYLLLFIALAQFPLFTWLGNVSVNWLI
Sbjct: 241 RHHYLLLFIALAQFPLFTWLGNVSVNWLI 269

[Close]

BLAST of Carg15490 vs. NCBI nr
Match: XP_022138088.1 (protein YIF1B-like [Momordica charantia])

HSP 1 Score: 527.7 bits (1358), Expect = 2.3e-146
Identity = 262/269 (97.40%), Postives = 264/269 (98.14%), Query Frame = 0


Query: 1   MYNNVEAQSAASKPLPSSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60
           MY+NVEAQSAA KP  SSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR
Sbjct: 1   MYSNVEAQSAAPKPPSSSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60

Query: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120
           YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120

Query: 121 PFMAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGCGEAPLL 180
           P MAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLG GEAPLL
Sbjct: 121 PLMAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLL 180

Query: 181 DIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDSS 240
           DIVAYAGYAFTGLCLAAIGRIS+KYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDSS
Sbjct: 181 DIVAYAGYAFTGLCLAAIGRISMKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDSS 240

Query: 241 RHHYLLLFIALAQFPLFTWLGNVSVNWLI 270
           RHHYLLLFIALAQFPLFTWLGNVSVNWLI
Sbjct: 241 RHHYLLLFIALAQFPLFTWLGNVSVNWLI 269

[Close]

BLAST of Carg15490 vs. TAIR10
Match: AT1G30890.1 (Integral membrane HRF1 family protein)

HSP 1 Score: 438.7 bits (1127), Expect = 2.5e-123
Identity = 214/269 (79.55%), Postives = 231/269 (85.87%), Query Frame = 0


Query: 1   MYNNVEAQSAASKPLPSSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60
           MYNN+  Q    +P  + +          AGSG IRGGLGAYGE+I GSSSEYVQSNISR
Sbjct: 1   MYNNMGPQPGMPRPPGNPEXXXXXXXXXXAGSGFIRGGLGAYGERILGSSSEYVQSNISR 60

Query: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120
           YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRI++P+GGRLSYKPPIYDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRISEPVGGRLSYKPPIYDINAPDLYI 120

Query: 121 PFMAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGCGEAPLL 180
           PFMAFGTYVVLAG SLGL GKFTPEAL+WLF+KGL+GWF+QVMLLKVTLLSLG GEAPLL
Sbjct: 121 PFMAFGTYVVLAGLSLGLNGKFTPEALNWLFVKGLVGWFLQVMLLKVTLLSLGSGEAPLL 180

Query: 181 DIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDSS 240
           DIVAY GYAF GLCLA   +I   YSYY LMPWT LC GIFLVKTMKRVLFAEVRSYDSS
Sbjct: 181 DIVAYGGYAFAGLCLAGFAKIMWGYSYYALMPWTCLCTGIFLVKTMKRVLFAEVRSYDSS 240

Query: 241 RHHYLLLFIALAQFPLFTWLGNVSVNWLI 270
           +HHYLLLF+AL QFPL  WLGN+SVNWL+
Sbjct: 241 KHHYLLLFLALVQFPLLIWLGNISVNWLL 269

[Close]

BLAST of Carg15490 vs. TAIR10
Match: AT3G59500.1 (Integral membrane HRF1 family protein)

HSP 1 Score: 425.6 bits (1093), Expect = 2.2e-119
Identity = 206/268 (76.87%), Postives = 226/268 (84.33%), Query Frame = 0


Query: 1   MYNNVEAQSAASKPLPSSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60
           MYNN+  +   + P                   LIR GLGAYGEKIFGSSSEYVQSNISR
Sbjct: 1   MYNNMGPRPGMAMPXXXXXXXXXXXXXXXXXXXLIRSGLGAYGEKIFGSSSEYVQSNISR 60

Query: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120
           YFSDPQYYFQVNDQYVRNKLK+VL PFLHRGHWTRI++P+GGRLSYKPPIYDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKIVLLPFLHRGHWTRISEPVGGRLSYKPPIYDINAPDLYI 120

Query: 121 PFMAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGCGEAPLL 180
           P MAFGTYVVLAG SLGL GKFTPEAL+WLF+KG++GWF+QVMLLK+TLLSLG GEAPLL
Sbjct: 121 PLMAFGTYVVLAGLSLGLYGKFTPEALNWLFVKGMVGWFLQVMLLKITLLSLGSGEAPLL 180

Query: 181 DIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDSS 240
           DIVAYAGY FTGLCLA +G+I   YSYY L+PWT LC G+FLVKTMKRVLFAE RSYDSS
Sbjct: 181 DIVAYAGYTFTGLCLAVLGKIIWGYSYYVLIPWTCLCTGVFLVKTMKRVLFAESRSYDSS 240

Query: 241 RHHYLLLFIALAQFPLFTWLGNVSVNWL 269
           RHHYLL+F+ALAQFPL  WLGN+SVNWL
Sbjct: 241 RHHYLLIFVALAQFPLLIWLGNISVNWL 268

[Close]

BLAST of Carg15490 vs. Swiss-Prot
Match: sp|Q5BJH7|YIF1B_HUMAN (Protein YIF1B OS=Homo sapiens OX=9606 GN=YIF1B PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.2e-23
Identity = 75/235 (31.91%), Postives = 123/235 (52.34%), Query Frame = 0


Query: 41  AYGEKIFGSSSEYVQSNISRY--FSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITD 100
           AYG  +     E V  NI R+   +  +YYF V+  YV  KL ++ FP+LH+    +   
Sbjct: 83  AYGSSLAAQGKELVDKNIDRFIPITKLKYYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQ 142

Query: 101 --PIGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGLL 160
             P+        P +D+NAPDLYIP MAF TYV++AG +LG Q +F+P+ L  L     L
Sbjct: 143 DTPVA-------PRFDVNAPDLYIPAMAFITYVLVAGLALGTQDRFSPDLLG-LQASSAL 202

Query: 161 GWF---MQVMLLKVTLLSLGCGEAPLLDIVAYAGYAFTGLCLAAI-GRISLKYSYYFLMP 220
            W    +  +LL + L+++   +   +D+VA+ GY + G+    + G +  K  YY ++ 
Sbjct: 203 AWLTLEVLAILLSLYLVTVNT-DLTTIDLVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLG 262

Query: 221 WTALCMGIFLVKTMKRVLFAE-------VRSYDSSRHHYLLLFIALAQFPLFTWL 261
           W  + + +F+++T++  + A+       VR   +    YL + +A AQ  L  WL
Sbjct: 263 WCCVAIFVFMIRTLRLKILADAAAEGVPVRGARNQLRMYLTMAVAAAQPMLMYWL 308

[Close]

BLAST of Carg15490 vs. Swiss-Prot
Match: sp|Q6GN58|YF1BA_XENLA (Protein YIF1B-A OS=Xenopus laevis OX=8355 GN=yif1b-a PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.9e-23
Identity = 76/240 (31.67%), Postives = 123/240 (51.25%), Query Frame = 0


Query: 41  AYGEKIFGSSSEYVQSNISRYF--SDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITD 100
           AYG  +     E +  NI R    S  +YYF V+  YV  K+ +++FP++H+    R   
Sbjct: 69  AYGSSLASQGKEMMDKNIDRIIPVSKIKYYFAVDTVYVGKKIGLLMFPYMHQDWEVRYQQ 128

Query: 101 --PIGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFSLGLQGKFTPE--------ALS 160
             P+        P +DINAPDLYIP MAF TY+++AG +LG Q +F+PE        AL+
Sbjct: 129 DTPVA-------PRFDINAPDLYIPVMAFVTYILVAGLALGTQSRFSPEILGMQASSALA 188

Query: 161 WLFIKGLLGWFMQVMLLKVTLLSLGCGEAPLLDIVAYAGYAFTGLCLAAI-GRISLKYSY 220
           WL ++ L       +LL + L+++   +   +D+VA+ GY + G+    I G +  K  Y
Sbjct: 189 WLIVEVL------AILLSLYLVTVNT-DLTTVDLVAFTGYKYVGMISGVISGLLFGKTGY 248

Query: 221 YFLMPWTALCMGIFLVKTMKRVLFAE-------VRSYDSSRHHYLLLFIALAQFPLFTWL 261
           Y ++ W  + +  F+++T++  + +E       VR   +    YL + IA  Q     WL
Sbjct: 249 YIVLAWCCISIVFFMIRTLRLKILSEAAAEGVLVRGARNQLRMYLTMAIAAVQPIFMYWL 294

[Close]

BLAST of Carg15490 vs. Swiss-Prot
Match: sp|Q9CX30|YIF1B_MOUSE (Protein YIF1B OS=Mus musculus OX=10090 GN=Yif1b PE=1 SV=2)

HSP 1 Score: 110.2 bits (274), Expect = 3.7e-23
Identity = 75/234 (32.05%), Postives = 123/234 (52.56%), Query Frame = 0


Query: 42  YGEKIFGSSSEYVQSNISRYF--SDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITD- 101
           YG  +     E V  NI R+   S  +YYF V+  YV  KL +++FP+LH+    +    
Sbjct: 81  YGSSLAAQGKELVDKNIDRFIPVSKLKYYFAVDTVYVGKKLGLLVFPYLHQDWEVQYQQD 140

Query: 102 -PIGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGLLG 161
            P+        P +DINAPDLYIP MAF TY+++AG +LG Q +F+P+ L  L     L 
Sbjct: 141 TPVA-------PRFDINAPDLYIPAMAFITYILVAGLALGTQDRFSPDLLG-LQASSALA 200

Query: 162 WF---MQVMLLKVTLLSLGCGEAPLLDIVAYAGYAFTGLCLAAI-GRISLKYSYYFLMPW 221
           W    +  +LL + L+++   +   +D+VA+ GY + G+    + G +  K  YY ++ W
Sbjct: 201 WLTLEVVAILLSLYLVTVNT-DLTTIDLVAFLGYKYVGMIGGVLTGLLFGKIGYYLVLAW 260

Query: 222 TALCMGIFLVKTMKRVLFAE-------VRSYDSSRHHYLLLFIALAQFPLFTWL 261
             + + +F+++T++  + A+       VR   +    YL + +A AQ  L  WL
Sbjct: 261 CCVSIFVFMIRTLRLKILAQAAAEGVPVRGARNQLRMYLTMAVAAAQPVLMYWL 305

[Close]

BLAST of Carg15490 vs. Swiss-Prot
Match: sp|Q6P301|YIF1B_XENTR (Protein YIF1B OS=Xenopus tropicalis OX=8364 GN=yif1b PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.7e-23
Identity = 76/240 (31.67%), Postives = 124/240 (51.67%), Query Frame = 0


Query: 41  AYGEKIFGSSSEYVQSNISRYF--SDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITD 100
           AYG  +     E +  NI R    S  +YYF V+  YV  K+ +++FP++H+    R   
Sbjct: 69  AYGSSLASQGKEMMDKNIDRIIPVSKIKYYFAVDTVYVGKKIGLLMFPYMHQDWEVRYQQ 128

Query: 101 --PIGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFSLGLQGKFTPE--------ALS 160
             P+        P +DINAPDLYIP MAF TY+++AG +LG Q +F+PE        AL+
Sbjct: 129 DTPVA-------PRFDINAPDLYIPVMAFITYILVAGLALGTQSRFSPEILGMQASSALA 188

Query: 161 WLFIKGLLGWFMQVMLLKVTLLSLGCGEAPLLDIVAYAGYAFTGLCLAAI-GRISLKYSY 220
           WL ++ L       +LL + L+++   +   +D+VA++GY + G+    I G +  K  Y
Sbjct: 189 WLIVEVL------AILLSLYLVTVNT-DLTTVDLVAFSGYKYVGMISGVISGLLFGKTGY 248

Query: 221 YFLMPWTALCMGIFLVKTMKRVLFAE-------VRSYDSSRHHYLLLFIALAQFPLFTWL 261
           Y ++ W  + +  F+++T++  + +E       VR   +    YL + IA  Q     WL
Sbjct: 249 YVVLSWCGISVVFFMIRTLRLKILSEAAAEGVLVRGARNQLRMYLTMAIAAVQPIFMYWL 294

[Close]

BLAST of Carg15490 vs. Swiss-Prot
Match: sp|Q4FZQ0|YF1BB_XENLA (Protein YIF1B-B OS=Xenopus laevis OX=8355 GN=yif1b-b PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.4e-22
Identity = 75/240 (31.25%), Postives = 123/240 (51.25%), Query Frame = 0


Query: 41  AYGEKIFGSSSEYVQSNISRYF--SDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITD 100
           AYG  +     E +  NI R    S  +YYF V+  YV  K+ +++FP++H+    R   
Sbjct: 69  AYGSSLASQGKEMMDKNIDRIIPVSKIKYYFAVDTVYVGKKIGLLMFPYMHQDWEVRYQQ 128

Query: 101 --PIGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFSLGLQGKFTPE--------ALS 160
             P+        P +DINAPDLYIP MAF TY+++AG +LG Q +F+PE        AL+
Sbjct: 129 DTPVA-------PRFDINAPDLYIPVMAFITYILVAGLALGTQSRFSPEILGMQASSALA 188

Query: 161 WLFIKGLLGWFMQVMLLKVTLLSLGCGEAPLLDIVAYAGYAFTGLCLAAI-GRISLKYSY 220
           WL ++ L       +LL + L+++   +   +D+VA++GY + G+    I G +     Y
Sbjct: 189 WLIVEVL------AILLSLYLVTVNT-DLTTVDLVAFSGYKYVGMISGVIAGLLFGNTGY 248

Query: 221 YFLMPWTALCMGIFLVKTMKRVLFAE-------VRSYDSSRHHYLLLFIALAQFPLFTWL 261
           Y ++ W  + +  F+++T++  + +E       VR   +    YL + IA  Q     WL
Sbjct: 249 YVVLAWCCISIVFFMIRTLRLKILSEAAAEGVLVRGARNQLRMYLTMAIAAVQPIFMYWL 294

[Close]

BLAST of Carg15490 vs. TrEMBL
Match: tr|A0A1S3BYN0|A0A1S3BYN0_CUCME (protein YIF1B OS=Cucumis melo OX=3656 GN=LOC103494509 PE=4 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 2.0e-146
Identity = 262/269 (97.40%), Postives = 263/269 (97.77%), Query Frame = 0


Query: 1   MYNNVEAQSAASKPLPSSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60
           MYNNVEAQ AA KP  SSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR
Sbjct: 1   MYNNVEAQPAAPKPPSSSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60

Query: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120
           YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120

Query: 121 PFMAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGCGEAPLL 180
           PFMAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLG GEAPLL
Sbjct: 121 PFMAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLL 180

Query: 181 DIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDSS 240
           DIVAYAGYAFTGLCLAAIGRI+LKYSYYFLMPW ALCMGIFLVKTMKRVLFAEVRSYDSS
Sbjct: 181 DIVAYAGYAFTGLCLAAIGRITLKYSYYFLMPWMALCMGIFLVKTMKRVLFAEVRSYDSS 240

Query: 241 RHHYLLLFIALAQFPLFTWLGNVSVNWLI 270
           RHHYLLLFIALAQFPLFTWLGNVSVNWLI
Sbjct: 241 RHHYLLLFIALAQFPLFTWLGNVSVNWLI 269

[Close]

BLAST of Carg15490 vs. TrEMBL
Match: tr|A0A0A0KU13|A0A0A0KU13_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G017080 PE=4 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 2.0e-146
Identity = 262/269 (97.40%), Postives = 263/269 (97.77%), Query Frame = 0


Query: 1   MYNNVEAQSAASKPLPSSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60
           MYNNVEAQ AA KP  SSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR
Sbjct: 1   MYNNVEAQPAAPKPPASSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60

Query: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120
           YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120

Query: 121 PFMAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGCGEAPLL 180
           PFMAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLG GEAPLL
Sbjct: 121 PFMAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLL 180

Query: 181 DIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDSS 240
           DIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPW ALCMGIFLVKTMKRVLFAEVR+YDSS
Sbjct: 181 DIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWMALCMGIFLVKTMKRVLFAEVRTYDSS 240

Query: 241 RHHYLLLFIALAQFPLFTWLGNVSVNWLI 270
           RHHYLLLFIALAQFPLFTWLGNVSVNWLI
Sbjct: 241 RHHYLLLFIALAQFPLFTWLGNVSVNWLI 269

[Close]

BLAST of Carg15490 vs. TrEMBL
Match: tr|M5WUV6|M5WUV6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G156000 PE=4 SV=1)

HSP 1 Score: 498.4 bits (1282), Expect = 9.9e-138
Identity = 244/269 (90.71%), Postives = 253/269 (94.05%), Query Frame = 0


Query: 1   MYNNVEAQSAASKPLPSSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60
           MYNNV AQ     P  +SQPNPFGN FYGAGSGLIRGGLGAYGEKI GSSSEYVQSNISR
Sbjct: 1   MYNNVGAQPGVPIPPATSQPNPFGNTFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNISR 60

Query: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120
           YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRIT+P+GGRLSYKPPIYDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYI 120

Query: 121 PFMAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGCGEAPLL 180
           PFMAFGTYVVLAGFSLGLQGKF+PEAL+WLFIKGLLGWFMQV LLKVTLLSLG GEAPLL
Sbjct: 121 PFMAFGTYVVLAGFSLGLQGKFSPEALNWLFIKGLLGWFMQVALLKVTLLSLGGGEAPLL 180

Query: 181 DIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDSS 240
           D+VAYAGYAFTGLCLA +GRI L YSYYFLMPWT LCMG+FLVKTMKRVLFAEVRSYDSS
Sbjct: 181 DMVAYAGYAFTGLCLAVLGRIVLSYSYYFLMPWTCLCMGVFLVKTMKRVLFAEVRSYDSS 240

Query: 241 RHHYLLLFIALAQFPLFTWLGNVSVNWLI 270
           +HHYLLLFIALAQFPLFTWLGNVSVNWLI
Sbjct: 241 KHHYLLLFIALAQFPLFTWLGNVSVNWLI 269

[Close]

BLAST of Carg15490 vs. TrEMBL
Match: tr|A0A2P5ESW8|A0A2P5ESW8_9ROSA (Yif1 family OS=Trema orientalis OX=63057 GN=TorRG33x02_155460 PE=4 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 1.3e-137
Identity = 244/269 (90.71%), Postives = 252/269 (93.68%), Query Frame = 0


Query: 1   MYNNVEAQSAASKPLPSSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60
           MYNNV AQ   S+P  +SQPNPFGNAFYGAGSGLIRGGLGAYGEKI GSSSEYVQSNISR
Sbjct: 1   MYNNVGAQPGVSRPPENSQPNPFGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNISR 60

Query: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120
           YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRIT+P+GGRLSYKPPIYDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYI 120

Query: 121 PFMAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGCGEAPLL 180
           PFMAFGTYVVLAGFSLGL GKF+PEAL+WLFIKGLLGWF+QV LLKVTLLSLG GEAPLL
Sbjct: 121 PFMAFGTYVVLAGFSLGLHGKFSPEALNWLFIKGLLGWFLQVALLKVTLLSLGSGEAPLL 180

Query: 181 DIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDSS 240
           DIVAYAGY FTGLCLA IGRI   YSYYFLMPW  LCMGIFLVKTMKRVLFAEVRSYDSS
Sbjct: 181 DIVAYAGYCFTGLCLAVIGRILWGYSYYFLMPWACLCMGIFLVKTMKRVLFAEVRSYDSS 240

Query: 241 RHHYLLLFIALAQFPLFTWLGNVSVNWLI 270
           RHHYLLLFIALAQFPLFTWLGN+SVNWLI
Sbjct: 241 RHHYLLLFIALAQFPLFTWLGNISVNWLI 269

[Close]

BLAST of Carg15490 vs. TrEMBL
Match: tr|A0A2P5CSI4|A0A2P5CSI4_PARAD (Yif1 family OS=Parasponia andersonii OX=3476 GN=PanWU01x14_127490 PE=4 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 3.7e-137
Identity = 243/269 (90.33%), Postives = 251/269 (93.31%), Query Frame = 0


Query: 1   MYNNVEAQSAASKPLPSSQPNPFGNAFYGAGSGLIRGGLGAYGEKIFGSSSEYVQSNISR 60
           MYNNV AQ   S+P  +SQPNPFGNAFYGAGSGLIRGGLGAYGEKI GSSSEYVQSNISR
Sbjct: 9   MYNNVGAQPGVSRPPANSQPNPFGNAFYGAGSGLIRGGLGAYGEKILGSSSEYVQSNISR 68

Query: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYKPPIYDINAPDLYI 120
           YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRIT+P+GGRLSYKPPIYDINAPDLYI
Sbjct: 69  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYI 128

Query: 121 PFMAFGTYVVLAGFSLGLQGKFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGCGEAPLL 180
           PFMAFGTYVVLAGFSLGL GKF+PEAL+WLFIKGLLGWF+QV LLKVTLLSLG GEAPLL
Sbjct: 129 PFMAFGTYVVLAGFSLGLHGKFSPEALNWLFIKGLLGWFLQVALLKVTLLSLGSGEAPLL 188

Query: 181 DIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDSS 240
           DIVAYAGY FTGLCLA IGR    YSYYFLMPW  LCMGIFLVKTMKRVLFAEVRSYDSS
Sbjct: 189 DIVAYAGYCFTGLCLAVIGRFLWGYSYYFLMPWACLCMGIFLVKTMKRVLFAEVRSYDSS 248

Query: 241 RHHYLLLFIALAQFPLFTWLGNVSVNWLI 270
           RHHYLLLFIALAQFPLFTWLGN+SVNWLI
Sbjct: 249 RHHYLLLFIALAQFPLFTWLGNISVNWLI 277

The following BLAST results are available for this feature:

BLAST of Carg15490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932593.1	2.4e-151	100.00	protein YIF1B-like [Cucurbita moschata] >XP_022933326.1 protein YIF1B-like isofo...	[more]
XP_023538665.1	6.9e-151	99.63	protein YIF1B-like [Cucurbita pepo subsp. pepo]	[more]
XP_022933327.1	7.6e-150	99.26	protein YIF1B-like isoform X2 [Cucurbita moschata]	[more]
XP_022956207.1	1.0e-146	97.77	protein YIF1B-like [Cucurbita moschata] >XP_022979905.1 protein YIF1B-like [Cucu...	[more]
XP_022138088.1	2.3e-146	97.40	protein YIF1B-like [Momordica charantia]	[more]

BLAST of Carg15490 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G30890.1	2.5e-123	79.55	Integral membrane HRF1 family protein	[more]
AT3G59500.1	2.2e-119	76.87	Integral membrane HRF1 family protein	[more]

BLAST of Carg15490 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q5BJH7\|YIF1B_HUMAN	2.2e-23	31.91	Protein YIF1B OS=Homo sapiens OX=9606 GN=YIF1B PE=1 SV=1	[more]
sp\|Q6GN58\|YF1BA_XENLA	2.9e-23	31.67	Protein YIF1B-A OS=Xenopus laevis OX=8355 GN=yif1b-a PE=2 SV=1	[more]
sp\|Q9CX30\|YIF1B_MOUSE	3.7e-23	32.05	Protein YIF1B OS=Mus musculus OX=10090 GN=Yif1b PE=1 SV=2	[more]
sp\|Q6P301\|YIF1B_XENTR	3.7e-23	31.67	Protein YIF1B OS=Xenopus tropicalis OX=8364 GN=yif1b PE=2 SV=1	[more]
sp\|Q4FZQ0\|YF1BB_XENLA	1.4e-22	31.25	Protein YIF1B-B OS=Xenopus laevis OX=8355 GN=yif1b-b PE=2 SV=1	[more]

BLAST of Carg15490 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BYN0\|A0A1S3BYN0_CUCME	2.0e-146	97.40	protein YIF1B OS=Cucumis melo OX=3656 GN=LOC103494509 PE=4 SV=1	[more]
tr\|A0A0A0KU13\|A0A0A0KU13_CUCSA	2.0e-146	97.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G017080 PE=4 SV=1	[more]
tr\|M5WUV6\|M5WUV6_PRUPE	9.9e-138	90.71	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G156000 PE=4 SV=1	[more]
tr\|A0A2P5ESW8\|A0A2P5ESW8_9ROSA	1.3e-137	90.71	Yif1 family OS=Trema orientalis OX=63057 GN=TorRG33x02_155460 PE=4 SV=1	[more]
tr\|A0A2P5CSI4\|A0A2P5CSI4_PARAD	3.7e-137	90.33	Yif1 family OS=Parasponia andersonii OX=3476 GN=PanWU01x14_127490 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005578	Yif1_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15490-RA	Carg15490-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005578	Yif1 family	PFAM	PF03878	YIF1	coord: 41..260 e-value: 1.3E-57 score: 195.0
IPR005578	Yif1 family	PANTHER	PTHR14083	YIP1 INTERACTING FACTOR HOMOLOG YIF1 PROTEIN	coord: 10..264
None	No IPR available	PANTHER	PTHR14083:SF6	SUBFAMILY NOT NAMED	coord: 10..264

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg15490	Csa4G017080	Cucumber (Chinese Long) v2	carcuB0716
Carg15490	MELO3C017680	Melon (DHL92) v3.5.1	carmeB0694
Carg15490	CSPI04G03740	Wild cucumber (PI 183967)	carcpiB0730
Carg15490	CmaCh06G016310	Cucurbita maxima (Rimu)	carcmaB0974
Carg15490	CmaCh14G015000	Cucurbita maxima (Rimu)	carcmaB0972
Carg15490	CmoCh14G015360	Cucurbita moschata (Rifu)	carcmoB0946
Carg15490	CmoCh06G016290	Cucurbita moschata (Rifu)	carcmoB0947
Carg15490	Lsi07G000800	Bottle gourd (USVL1VR-Ls)	carlsiB634
Carg15490	Cp4.1LG08g05720	Cucurbita pepo (Zucchini)	carcpeB0974
Carg15490	Cp4.1LG03g12490	Cucurbita pepo (Zucchini)	carcpeB0973
Carg15490	CsGy4G003630	Cucumber (Gy14) v2	carcgybB0693
Carg15490	MELO3C017680.2	Melon (DHL92) v3.6.1	carmedB0707
Carg15490	CsaV3_4G003750	Cucumber (Chinese Long) v3	carcucB0733
Carg15490	Bhi01G002051	Wax gourd	carwgoB0816

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg15490	Carg22443	Silver-seed gourd	carcarB231

The following block(s) are covering this gene:


Gene	Organism	Block
Carg15490	Cucumber (Gy14) v1	carcgyB0775
Carg15490	Watermelon (Charleston Gray)	carwcgB0671
Carg15490	Watermelon (97103) v1	carwmB0691
Carg15490	Watermelon (97103) v2	carwmbB0723