CsaV3_3G043760 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G043760
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionSMAD/FHA domain protein, putative
Locationchr3 : 35629024 .. 35630989 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAATTCAAGAAATTGTACATAAAAGAAAATACAAATCTAGAGATGAGCTTAATTAACTAACATTTGTACATTTCTAAAAACAAAAAAGTTATTCAAATTCAAATCTTCCCGTGAAAGTTTTACATTTTTAAAAGGAAAGTATGTAAAGTTATGAAACGACATGTCGTCAGGCGCTCGGTGGGCTACACGTCGTGTGGAACAGCTTGAAGACACCGGTCGGCTACGGCGGCGCCAAAAACAGAACGTTTCCGAAATTTTAGCTTTCAAATCCTTTAGAAGCGGCATTTAAGCGATGGAAATCACCGGCGAAGACGGTTCAAAGTTAGTTCTACGAGAGCCAGTGACAGTATTCGGAAGAGGCTCAGGATTTGCTTCCAAAGATCGAACAATATCTCGTCGTCACATTTTAATTGAAGCTAAAACCTCAGAGAACACTAATGGAGCTCCCATGGAGCCTAAAGTTTCCTTCGAGGTCATCGGTAGGAACCCTATCTGGGTTCGGAGCAGCAAAAATGGCGAAATCAGAACATTTAAAAGATCGGAAAAGGGCGAGATGGCGCCTGGTGAGTCGTTCTGCGTGGGTGGGCAAGAACCAATTTGGTTCGAATTAAACAAGATCGCTGAATTCGAAGAAGGGAAGCAAGTTTTTTCGCGTTCTTCTGATTCAGATGATATCGATGTTTCTGGCATTGATCCCGTCAAAGGTTTTTTCCCGAAAACCTATATAATTTTCCTTATTAACTTTGGAGAAAAGTAATCGAAATCGTCACTTTTCCAGGTTGTTACCAAATTACGCCTAGGATTTTGATATCGAAAAGTAAAATTAGGCGATACTACTAAGTAAACAAACGATATAACTGTTTTAGGAGTTTCAAATTGCGAGTCAATGATACTGATTGTTCTTACTTTGGTTTTCTTGTAATGGGACACGAATTTGAATCCTGACTAATGTTTGCTCTCGAAAATCTTTCTAGTTTTCCTTAGAGAATTTAGAGAAAAATAATTGGAATCATCACTTTTCCAGATTGTTGCATATCCTGCGTAGGATTTTAATAGAATTAGCAGATACTTTAGAGAACAAACGAAACATTGTTTTCGAAGTTCCAAATTTTGAATCAATGATACTGATTGTTCTTACTGTTCTCATGTCAGAATTTGGTTTTCTTGTCATGGGACACGAGTTTGAATGTTATGGCAATCGGGTGATTCGTGATGTGAAAAAATGGGACTGGTTTCTGGATGGGCCGAGTAAAGACAGTGATGATGACAATGAAGATTATGAGAGGAAAAAGAAGAGAGGAGTAATCGGAAAGAGAAAAAAAGGAACAAACAGTGACGATGAAGATTGGACAGATGAGAATGAAGATGCTGTTGAAATGATTACGAAAGTACAAAAGTCTCAAAGACCCAAATACTCCACAAGATCAAAAGATCGCAATAAGATTTCTAATGATCAAAGAAAGGCTGCTAAATCTAATAAGAACTATAATGGAGAAGTTGAAGAAGATGAAGATGATGAAACTTTAGGAGGCTTTATTGTAGATGATGAAGTAGATAATGTAGAACAGATGGACGAAGATGAAGAAGAAGAAGAATTTTTAGATGATGAGGAAGATGAGGAAGATTGATGAAGCTAATTGTTATTGGCTGCTCTAACTTAGGCTTGTTCTAGAGAGTTTTGTCTTTGTACATTATTTACCTTTAGTTTCATGTTTGTGAAATATACAAGGATCAGTTTTGTGTTGTATCTCAAATTGTAGTTTGATAATCATCTTCAGAGGCCTTCTTGTAAGTTGTAGTACTCTTTTGTCTCGTGTTGTTAAGAAATTATTCGAGGAGGCCATGCGAGAGAAACCGTGAAAGTATCTTAAATTTATACTCAATAGTTAAGTATTAGCATGCAGATTTTCTTCATCAGACTTCATATTCCCAAACTCCCATTTATCTGAATTCTTGTTGTTTGCCC

mRNA sequence

ATGGAAATCACCGGCGAAGACGGTTCAAAGTTAGTTCTACGAGAGCCAGTGACAGTATTCGGAAGAGGCTCAGGATTTGCTTCCAAAGATCGAACAATATCTCGTCGTCACATTTTAATTGAAGCTAAAACCTCAGAGAACACTAATGGAGCTCCCATGGAGCCTAAAGTTTCCTTCGAGGTCATCGGTAGGAACCCTATCTGGGTTCGGAGCAGCAAAAATGGCGAAATCAGAACATTTAAAAGATCGGAAAAGGGCGAGATGGCGCCTGGTGAGTCGTTCTGCGTGGGTGGGCAAGAACCAATTTGGTTCGAATTAAACAAGATCGCTGAATTCGAAGAAGGGAAGCAAGTTTTTTCGCGTTCTTCTGATTCAGATGATATCGATGTTTCTGGCATTGATCCCGTCAAAGAATTTGGTTTTCTTGTCATGGGACACGAGTTTGAATGTTATGGCAATCGGGTGATTCGTGATGTGAAAAAATGGGACTGGTTTCTGGATGGGCCGAGTAAAGACAGTGATGATGACAATGAAGATTATGAGAGGAAAAAGAAGAGAGGAGTAATCGGAAAGAGAAAAAAAGGAACAAACAGTGACGATGAAGATTGGACAGATGAGAATGAAGATGCTGTTGAAATGATTACGAAAGTACAAAAGTCTCAAAGACCCAAATACTCCACAAGATCAAAAGATCGCAATAAGATTTCTAATGATCAAAGAAAGGCTGCTAAATCTAATAAGAACTATAATGGAGAAGTTGAAGAAGATGAAGATGATGAAACTTTAGGAGGCTTTATTGTAGATGATGAAGTAGATAATGTAGAACAGATGGACGAAGATGAAGAAGAAGAAGAATTTTTAGATGATGAGGAAGATGAGGAAGATTGA

Coding sequence (CDS)

ATGGAAATCACCGGCGAAGACGGTTCAAAGTTAGTTCTACGAGAGCCAGTGACAGTATTCGGAAGAGGCTCAGGATTTGCTTCCAAAGATCGAACAATATCTCGTCGTCACATTTTAATTGAAGCTAAAACCTCAGAGAACACTAATGGAGCTCCCATGGAGCCTAAAGTTTCCTTCGAGGTCATCGGTAGGAACCCTATCTGGGTTCGGAGCAGCAAAAATGGCGAAATCAGAACATTTAAAAGATCGGAAAAGGGCGAGATGGCGCCTGGTGAGTCGTTCTGCGTGGGTGGGCAAGAACCAATTTGGTTCGAATTAAACAAGATCGCTGAATTCGAAGAAGGGAAGCAAGTTTTTTCGCGTTCTTCTGATTCAGATGATATCGATGTTTCTGGCATTGATCCCGTCAAAGAATTTGGTTTTCTTGTCATGGGACACGAGTTTGAATGTTATGGCAATCGGGTGATTCGTGATGTGAAAAAATGGGACTGGTTTCTGGATGGGCCGAGTAAAGACAGTGATGATGACAATGAAGATTATGAGAGGAAAAAGAAGAGAGGAGTAATCGGAAAGAGAAAAAAAGGAACAAACAGTGACGATGAAGATTGGACAGATGAGAATGAAGATGCTGTTGAAATGATTACGAAAGTACAAAAGTCTCAAAGACCCAAATACTCCACAAGATCAAAAGATCGCAATAAGATTTCTAATGATCAAAGAAAGGCTGCTAAATCTAATAAGAACTATAATGGAGAAGTTGAAGAAGATGAAGATGATGAAACTTTAGGAGGCTTTATTGTAGATGATGAAGTAGATAATGTAGAACAGATGGACGAAGATGAAGAAGAAGAAGAATTTTTAGATGATGAGGAAGATGAGGAAGATTGA

Protein sequence

MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFEVIGRNPIWVRSSKNGEIRTFKRSEKGEMAPGESFCVGGQEPIWFELNKIAEFEEGKQVFSRSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDDDNEDYERKKKRGVIGKRKKGTNSDDEDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQRKAAKSNKNYNGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEEFLDDEEDEED
Homology
[Close]
BLAST of CsaV3_3G043760 vs. NCBI nr
Match: XP_004146848.1 (PREDICTED: nucleolin 1 [Cucumis sativus] >KGN59809.1 hypothetical protein Csa_3G848190 [Cucumis sativus])

HSP 1 Score: 359.8 bits (922), Expect = 9.1e-96
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0 

Query: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60
           MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE
Sbjct: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60

Query: 61  VIGRNPIWVRSSKNGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKQVFS 120
           VIGRNPIWVRSSKNGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKQVFS
Sbjct: 61  VIGRNPIWVRSSKNGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKQVFS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDXXXXXX 180
           RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDXXXXXX
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR 240
           XXXXXXXXXXXXXXXXXXXXXDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR 240

Query: 241 KAAKSNKNYNGEV 254
           KAAKSNKNYNGEV
Sbjct: 241 KAAKSNKNYNGEV 253

[Close]
BLAST of CsaV3_3G043760 vs. NCBI nr
Match: XP_008447630.1 (PREDICTED: nucleolin 1 [Cucumis melo])

HSP 1 Score: 291.6 bits (745), Expect = 3.0e-75
Identity = 213/253 (84.19%), Postives = 217/253 (85.77%), Query Frame = 0 

Query: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60
           MEI GEDGSKLVLREPVT+FGRGSGFASKDRTISRRHILIEAKTS+NTNGAPMEPKVSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE 60

Query: 61  VIGRNPIWVRSSKNGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKQVFS 120
           VIGRNPIWVRSSKNGE      XXXXXXXXXXXXXXXXXXXXXXXXXXX    EGK V S
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFRRXXXXXXXXXXXXXXXXXXXXXXXXXXXTEFEEGKLVSS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDXXXXXX 180
           RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKD  XXXXXX
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR 240
           XXXXXXXXXXXXXXXXXXXXX                     PKYSTRSKDRNKISNDQR
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKYSTRSKDRNKISNDQR 240

Query: 241 KAAKSNKNYNGEV 254
           KAAKSNK+Y+GEV
Sbjct: 241 KAAKSNKDYDGEV 253

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BLAST of CsaV3_3G043760 vs. NCBI nr
Match: XP_022980683.1 (protein BFR2 [Cucurbita maxima])

HSP 1 Score: 278.5 bits (711), Expect = 2.7e-71
Identity = 146/234 (62.39%), Postives = 156/234 (66.67%), Query Frame = 0 

Query: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60
           MEI GEDGSKLVLREPVT+FGRGSGFA KDRT+SR HILI+AKTSEN+NG PMEP+VSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFACKDRTVSRCHILIKAKTSENSNGVPMEPRVSFE 60

Query: 61  VIGRNPIWVRSSKNGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKQVFS 120
           VIG+NPIWVRS KNGE                                     EG+++ S
Sbjct: 61  VIGKNPIWVRSGKNGEIRTFRSSEKGEMVPGESFCMGGQEPMWFQLNKIAEFEEGEKICS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDXXXXXX 180
           RSSDSDDIDVSGIDPVKEFGFL  GHEFECYGNRVIRD KKWDWFLD   KDSD      
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLAKGHEFECYGNRVIRDAKKWDWFLDERRKDSD-DEEDY 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNK 235
                                DWTDENEDAVEMITK +K QRPKYSTRSKDRNK
Sbjct: 181 GRKQKSRVRGKRKKGANNDDEDWTDENEDAVEMITKTKKFQRPKYSTRSKDRNK 233

[Close]
BLAST of CsaV3_3G043760 vs. NCBI nr
Match: XP_023526483.1 (protein BFR2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 278.5 bits (711), Expect = 2.7e-71
Identity = 165/238 (69.33%), Postives = 175/238 (73.53%), Query Frame = 0 

Query: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60
           MEI GEDGSKLV REPVT+FGRGSGFA KDRT+SRRHILIEAKTSEN+NG PMEP+VSFE
Sbjct: 1   MEIAGEDGSKLVPREPVTIFGRGSGFACKDRTVSRRHILIEAKTSENSNGVPMEPRVSFE 60

Query: 61  VIGRNPIWVRSSKNGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKQVFS 120
           VIG+NPIWVRS KNGE                                     EG+++ S
Sbjct: 61  VIGKNPIWVRSGKNGEIRTFRCSEKGEMVPGESFCMGGQELMWFELNKIGEFEEGEKICS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDXXXXXX 180
           RSSDS+DIDVSGIDPVKEFGFL  GHEFECYGNRVIRD KKWDWFLD P KDSD XXXXX
Sbjct: 121 RSSDSEDIDVSGIDPVKEFGFLAKGHEFECYGNRVIRDAKKWDWFLDEPRKDSD-XXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISND 239
           XXXXXXXXXXXXXX       DWTDENEDAV MITK +K QRPKYSTRSKD NK   D
Sbjct: 181 XXXXXXXXXXXXXXGANNDDEDWTDENEDAVGMITKTKKFQRPKYSTRSKDSNKTHKD 237

[Close]
BLAST of CsaV3_3G043760 vs. NCBI nr
Match: XP_022152655.1 (protein bfr2 [Momordica charantia])

HSP 1 Score: 277.3 bits (708), Expect = 5.9e-71
Identity = 183/257 (71.21%), Postives = 196/257 (76.26%), Query Frame = 0 

Query: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60
           MEI GEDGSKLV+ EPVT+FGRGSGFASKDRT+SRRH+LIEAKTSEN +GAP+EP +SFE
Sbjct: 1   MEIAGEDGSKLVVGEPVTIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFE 60

Query: 61  VIGRNPIWVRSSKNGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKQV-- 120
           VIGRNPIWVRS KNGE    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GK++  
Sbjct: 61  VIGRNPIWVRSGKNGEIRTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKRIVP 120

Query: 121 ---------FSRSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGP 180
                     +RSSDS+DIDVSGIDPVKEFGFLVMGHEFECYGNRVIRD KKWDWFLD P
Sbjct: 121 KTEDQFAERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEP 180

Query: 181 SKDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXDWTDENEDAVEMITKVQKSQRPKYSTRS 240
            K SD                           DWTDENEDAVEMI K +K QRPKYSTRS
Sbjct: 181 RKGSD-DDEDYGRRKRRGVRGKRKKGANSDDEDWTDENEDAVEMIAKAKKVQRPKYSTRS 240

Query: 241 KDRNKISNDQRKAAKSN 247
           KD NK + DQ KAA SN
Sbjct: 241 KDHNKTNKDQNKAANSN 256

[Close]
BLAST of CsaV3_3G043760 vs. TAIR10
Match: AT3G13780.1 (SMAD/FHA domain-containing protein )

HSP 1 Score: 111.7 bits (278), Expect = 7.8e-25
Identity = 63/168 (37.50%), Postives = 92/168 (54.76%), Query Frame = 0 

Query: 1   MEITGEDGSKLVLREPV-TVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSF 60
           MEI GEDG+KL L+  V  VFGRG+GF ++D T+SRRH+ +  K +    G      VSF
Sbjct: 14  MEIEGEDGTKLFLKTGVKDVFGRGAGFNTEDLTVSRRHVSLVFKPA--AAGTEPSDMVSF 73

Query: 61  EVIGRNPIWVRSSKNGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKQVF 120
           EV+GRNP+W+R+ + G+                                       + + 
Sbjct: 74  EVLGRNPVWIRAVEKGK----KIQTLRKPETGEIATGDQFCVSGNHPIWFTLKRRDEVME 133

Query: 121 SRSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLD 168
            R+ D  +I+++ IDPVKEFGFLV+G EF+ Y    +RD+K+W+WFL+
Sbjct: 134 ERALDHGEIELN-IDPVKEFGFLVIGKEFDQYPKSRVRDIKQWEWFLE 174

[Close]
BLAST of CsaV3_3G043760 vs. TrEMBL
Match: tr|A0A0A0LFR7|A0A0A0LFR7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G848190 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 6.0e-96
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0 

Query: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60
           MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE
Sbjct: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60

Query: 61  VIGRNPIWVRSSKNGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKQVFS 120
           VIGRNPIWVRSSKNGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKQVFS
Sbjct: 61  VIGRNPIWVRSSKNGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKQVFS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDXXXXXX 180
           RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDXXXXXX
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR 240
           XXXXXXXXXXXXXXXXXXXXXDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR 240

Query: 241 KAAKSNKNYNGEV 254
           KAAKSNKNYNGEV
Sbjct: 241 KAAKSNKNYNGEV 253

[Close]
BLAST of CsaV3_3G043760 vs. TrEMBL
Match: tr|A0A1S3BHB4|A0A1S3BHB4_CUCME (nucleolin 1 OS=Cucumis melo OX=3656 GN=LOC103490042 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.0e-75
Identity = 213/253 (84.19%), Postives = 217/253 (85.77%), Query Frame = 0 

Query: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60
           MEI GEDGSKLVLREPVT+FGRGSGFASKDRTISRRHILIEAKTS+NTNGAPMEPKVSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE 60

Query: 61  VIGRNPIWVRSSKNGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKQVFS 120
           VIGRNPIWVRSSKNGE      XXXXXXXXXXXXXXXXXXXXXXXXXXX    EGK V S
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFRRXXXXXXXXXXXXXXXXXXXXXXXXXXXTEFEEGKLVSS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDXXXXXX 180
           RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKD  XXXXXX
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR 240
           XXXXXXXXXXXXXXXXXXXXX                     PKYSTRSKDRNKISNDQR
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKYSTRSKDRNKISNDQR 240

Query: 241 KAAKSNKNYNGEV 254
           KAAKSNK+Y+GEV
Sbjct: 241 KAAKSNKDYDGEV 253

[Close]
BLAST of CsaV3_3G043760 vs. TrEMBL
Match: tr|A0A2I4GXF0|A0A2I4GXF0_9ROSI (uncharacterized protein LOC109011735 isoform X1 OS=Juglans regia OX=51240 GN=LOC109011735 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 2.4e-36
Identity = 98/261 (37.55%), Postives = 134/261 (51.34%), Query Frame = 0 

Query: 1   MEITGEDGSKLVLR---EPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKV 60
           ME+ GEDGS++ L+      T FGRG GF + DRT+SRRH+L E KTS++ + +     V
Sbjct: 1   MEVEGEDGSRIALQNGPNHKTFFGRGLGFHTDDRTVSRRHVLFEVKTSDDKSRSLTGATV 60

Query: 61  SFEVIGRNPIWVRSSKNGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKQ 120
           SFEV+G+NPIWV++S  GE                                       K+
Sbjct: 61  SFEVVGKNPIWVKNSGCGEIRVYRSGEKGEVAAGDCFCLSGKRPVRFSVQGRGFGAAEKR 120

Query: 121 VFSRSSDSD----------DIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLD 180
           V     + D           IDVS IDPVKEFGFLVMGHEF+ Y  ++IRD+K WDWFL+
Sbjct: 121 VLGSEDELDASLTSGFEFGGIDVSEIDPVKEFGFLVMGHEFDHYPKQMIRDIKNWDWFLE 180

Query: 181 GPSKDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXDWTDENEDAVEMITKVQKSQRPKYST 240
            P +DSD                           +WT E++D  E++ K++K +RPKY T
Sbjct: 181 EPGRDSD-DDAYLEKKVKRGVMRKRRKAEGNNDDNWTGESDDDGELVAKLRKVERPKYLT 240

Query: 241 RSKDRNKISNDQRKAAKSNKN 249
           RSK+  K     RK AK++++
Sbjct: 241 RSKECEK----SRKDAKASRD 256

[Close]
BLAST of CsaV3_3G043760 vs. TrEMBL
Match: tr|A0A2I4GXH1|A0A2I4GXH1_9ROSI (uncharacterized protein LOC109011735 isoform X2 OS=Juglans regia OX=51240 GN=LOC109011735 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 2.4e-36
Identity = 98/261 (37.55%), Postives = 134/261 (51.34%), Query Frame = 0 

Query: 1   MEITGEDGSKLVLR---EPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKV 60
           ME+ GEDGS++ L+      T FGRG GF + DRT+SRRH+L E KTS++ + +     V
Sbjct: 1   MEVEGEDGSRIALQNGPNHKTFFGRGLGFHTDDRTVSRRHVLFEVKTSDDKSRSLTGATV 60

Query: 61  SFEVIGRNPIWVRSSKNGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKQ 120
           SFEV+G+NPIWV++S  GE                                       K+
Sbjct: 61  SFEVVGKNPIWVKNSGCGEIRVYRSGEKGEVAAGDCFCLSGKRPVRFSVQGRGFGAAEKR 120

Query: 121 VFSRSSDSD----------DIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLD 180
           V     + D           IDVS IDPVKEFGFLVMGHEF+ Y  ++IRD+K WDWFL+
Sbjct: 121 VLGSEDELDASLTSGFEFGGIDVSEIDPVKEFGFLVMGHEFDHYPKQMIRDIKNWDWFLE 180

Query: 181 GPSKDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXDWTDENEDAVEMITKVQKSQRPKYST 240
            P +DSD                           +WT E++D  E++ K++K +RPKY T
Sbjct: 181 EPGRDSD-DDAYLEKKVKRGVMRKRRKAEGNNDDNWTGESDDDGELVAKLRKVERPKYLT 240

Query: 241 RSKDRNKISNDQRKAAKSNKN 249
           RSK+  K     RK AK++++
Sbjct: 241 RSKECEK----SRKDAKASRD 256

[Close]
BLAST of CsaV3_3G043760 vs. TrEMBL
Match: tr|A0A1Q3DEH7|A0A1Q3DEH7_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_34237 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 4.1e-36
Identity = 102/251 (40.64%), Postives = 133/251 (52.99%), Query Frame = 0 

Query: 1   MEITGEDGSKLVLR-EPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSF 60
           MEI GEDGS+  L+ +  TVFGRGSGF ++DR++SRRH+L + ++  +      EP+V F
Sbjct: 1   MEIEGEDGSRTKLKPDSKTVFGRGSGFNTEDRSVSRRHVLFQVQSPVSKTDTQTEPRVYF 60

Query: 61  EVIGRNPIWVRSSKNGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKQVF 120
           EV+G+NPIWVRS K+GE                        XXXX             + 
Sbjct: 61  EVLGKNPIWVRSKKDGEDIRVYRRLESGYVEAGDWFCVSGQXXXXF-----------SIR 120

Query: 121 SRSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDXXXXX 180
           S +  ++ ID S IDPVKEFGFLV+GHEF+ Y  R I D+K WDWFL+ P+KDSD     
Sbjct: 121 SGNEMAEVIDASTIDPVKEFGFLVIGHEFDQYPKRKISDMKDWDWFLEEPAKDSD-DDEV 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNK----I 240
                                 DWT E E   ++ITK++K  R  YSTRSK+R K    +
Sbjct: 181 FEGNGKRGIKKKRKKPEGNEDDDWTSERECDKDLITKLRKVSRSNYSTRSKNREKGQKRV 239

Query: 241 SNDQRKAAKSN 247
            N QR     N
Sbjct: 241 RNGQRLTIGKN 239

The following BLAST results are available for this feature:
BLAST of CsaV3_3G043760 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146848.19.1e-96100.00PREDICTED: nucleolin 1 [Cucumis sativus] >KGN59809.1 hypothetical protein Csa_3G... [more]
XP_008447630.13.0e-7584.19PREDICTED: nucleolin 1 [Cucumis melo][more]
XP_022980683.12.7e-7162.39protein BFR2 [Cucurbita maxima][more]
XP_023526483.12.7e-7169.33protein BFR2 [Cucurbita pepo subsp. pepo][more]
XP_022152655.15.9e-7171.21protein bfr2 [Momordica charantia][more]
BLAST of CsaV3_3G043760 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G13780.17.8e-2537.50SMAD/FHA domain-containing protein [more]
BLAST of CsaV3_3G043760 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G043760 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LFR7|A0A0A0LFR7_CUCSA6.0e-96100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G848190 PE=4 SV=1[more]
tr|A0A1S3BHB4|A0A1S3BHB4_CUCME2.0e-7584.19nucleolin 1 OS=Cucumis melo OX=3656 GN=LOC103490042 PE=4 SV=1[more]
tr|A0A2I4GXF0|A0A2I4GXF0_9ROSI2.4e-3637.55uncharacterized protein LOC109011735 isoform X1 OS=Juglans regia OX=51240 GN=LOC... [more]
tr|A0A2I4GXH1|A0A2I4GXH1_9ROSI2.4e-3637.55uncharacterized protein LOC109011735 isoform X2 OS=Juglans regia OX=51240 GN=LOC... [more]
tr|A0A1Q3DEH7|A0A1Q3DEH7_CEPFO4.1e-3640.64Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_34237 PE=4... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR008984SMAD_FHA_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G043760.1CsaV3_3G043760.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:2.60.200.20coord: 3..108
e-value: 1.9E-14
score: 55.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..295
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 224..251
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 167..185
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 167..295
NoneNo IPR availablePANTHERPTHR37733FAMILY NOT NAMEDcoord: 1..295
IPR008984SMAD/FHA domain superfamilySUPERFAMILYSSF49879SMAD/FHA domaincoord: 5..98

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G043760CSPI03G41310Wild cucumber (PI 183967)cpicucB145
CsaV3_3G043760Cucsa.341080Cucumber (Gy14) v1cgycucB523
CsaV3_3G043760CmaCh14G012580Cucurbita maxima (Rimu)cmacucB0283
CsaV3_3G043760CmoCh14G012930Cucurbita moschata (Rifu)cmocucB0274
CsaV3_3G043760Cp4.1LG03g14440Cucurbita pepo (Zucchini)cpecucB0751
CsaV3_3G043760CsGy3G038780Cucumber (Gy14) v2cgybcucB117
CsaV3_3G043760Carg06431Silver-seed gourdcarcucB0134
CsaV3_3G043760Cla012601Watermelon (97103) v1cucwmB224
CsaV3_3G043760MELO3C013088Melon (DHL92) v3.5.1cucmeB211
CsaV3_3G043760ClCG07G013830Watermelon (Charleston Gray)cucwcgB262
CsaV3_3G043760Lsi07G005830Bottle gourd (USVL1VR-Ls)cuclsiB254
CsaV3_3G043760MELO3C013088.2Melon (DHL92) v3.6.1cucmedB204
CsaV3_3G043760Bhi01G002127Wax gourdcucwgoB293
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G043760Cucumber (Chinese Long) v3cuccucB155
CsaV3_3G043760Silver-seed gourdcarcucB0226
CsaV3_3G043760Silver-seed gourdcarcucB1071
CsaV3_3G043760Cucumber (Gy14) v2cgybcucB327
CsaV3_3G043760Cucumber (Gy14) v1cgycucB546
CsaV3_3G043760Cucurbita maxima (Rimu)cmacucB0426
CsaV3_3G043760Cucurbita maxima (Rimu)cmacucB0538
CsaV3_3G043760Cucurbita maxima (Rimu)cmacucB1056
CsaV3_3G043760Cucurbita moschata (Rifu)cmocucB0421
CsaV3_3G043760Cucurbita moschata (Rifu)cmocucB0523
CsaV3_3G043760Cucurbita moschata (Rifu)cmocucB1038
CsaV3_3G043760Cucurbita pepo (Zucchini)cpecucB0155
CsaV3_3G043760Cucurbita pepo (Zucchini)cpecucB0380
CsaV3_3G043760Cucurbita pepo (Zucchini)cpecucB0695
CsaV3_3G043760Wild cucumber (PI 183967)cpicucB394
CsaV3_3G043760Bottle gourd (USVL1VR-Ls)cuclsiB190
CsaV3_3G043760Melon (DHL92) v3.5.1cucmeB185
CsaV3_3G043760Melon (DHL92) v3.6.1cucmedB176
CsaV3_3G043760Watermelon (Charleston Gray)cucwcgB190
CsaV3_3G043760Watermelon (97103) v1cucwmB201
CsaV3_3G043760Watermelon (97103) v2cucwmbB242
CsaV3_3G043760Watermelon (97103) v2cucwmbB260
CsaV3_3G043760Wax gourdcucwgoB349