CsGy3G038780 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G038780
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	SMAD/FHA domain-containing protein, putative
Location	Chr3 : 36476471 .. 36478094 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATCACCGGCGAAGACGGTTCAAAGTTAGTTCTACGAGAGCCAGTGACAGTATTCGGAAGAGGCTCAGGATTTGCTTCCAAAGATCGAACAATATCTCGTCGTCACATTTTAATTGAAGCTAAAACCTCAGAGAACACTAATGGAGCTCCCATGGAGCCTAAAGTTTCCTTCGAGGTCATCGGTAGGAACCCTATCTGGGTTCGGAGCAGCAAAAATGGCGAAATCAGAACATTTAAAAGATCGGAAAAGGGCGAGATGGCGCCTGGTGAGTCGTTCTGCGTGGTGGGCAAGAACCAATTTGGTTCGAATTAAACAAGATCGCTGAATTCGAAGAAGGGAAGCAAGTTTTTTCGCGTTCTTCTGATTCAGATGATATCGATGTTTCTGGCATTGATCCCGTCAAAGGTTTTTTCCCGAAAACCTATATAATTTTCCTTATTAACTTTGGAGAAAAGTAATCGAAATCGTCACTTTTCCAGGTTGTTACCAAATTACGCCTAGGATTTTGATATCGAAAAGTAAAATTAGGCGATACTACTAAGTAAACAAACGATATAACTGTTTTAGGAGTTTCAAATTGCGAGTCAATGATACTGATTGTTCTTACTTTGGTTTTCTTGTAATGGGACACGAATTTGAATCCTGACTAATGTTTGCTCTCGAAAATCTTTCTAGTTTTCCTTAGAGAATTTAGAGAAAAATAATTGGAATCATCACTTTTCCAGATTGTTGCATATCCTGCGTAGGATTTTAATAGAATTAGCAGATACTTTAGAGAACAAACGAAACATTGTTTTCGAAGTTCCAAATTTTGAATCAATGATACTGATTGTTCTTACTGTTCTCATGTCAGAATTTGGTTTTCTTGTCATGGGACACGAGTTTGAATGTTATGGCAATCGGGTGATTCGTGATGTGAAAAAATGGGACTGGTTTCTGGATGGGCCGAGTAAAGACAGTGATGATGACAATGAAGATTATGAGAGGAAAAAGAAGAGAGGAGTAATCGGAAAGAGAAAAAAAGGAACAAACAGTGACGATGAAGATTGGACAGATGAGAATGAAGATGCTGTTGAAATGATTACGAAAGTACAAAAGTCTCAAAGACCCAAATACTCCACAAGATCAAAAGATCGCAATAAGATTTCTAATGATCAAAGAAAGGCTGCTAAATCTAATAAGAACTATAATGGAGAAGTTGAAGAAGATGAAGATGATGAAACTTTAGGAGGCTTTATTGTAGATGATGAAGTAGATAATGTAGAACAGATGGACGAAGATGAAGAAGAAGAAGAATTTTTAGATGATGAGGAAGATGAGGAAGATTGATGAAGCTAATTGTTATTGGCTGCTCTAACTTAGGCTTGTTCTAGAGAGTTTTGTCTTTGTACATTATTTACCTTTAGTTTCATGTTTGTGAAATATACAAGGATCAGTTTTGTGTTGTATCTCAAATTGTAGTTTGATAATCATCTTCAGAGGCCTTCTTGTAAGTTGTAGTACTCTTTTGTCTCGTGTTGTTAAGAAATTATTCGAGGAGGCCATGCGAGAGAAACCGTGAAAGTATCTTAAATTTATACTCAATAGTTAAGTATTAGCATGCAGATTTTCTTCATCA

mRNA sequence

ATGGAAATCACCGGCGAAGACGGTTCAAAGTTAGTTCTACGAGAGCCAGTGACAGTATTCGGAAGAGGCTCAGGATTTGCTTCCAAAGATCGAACAATATCTCGTCGTCACATTTTAATTGAAGCTAAAACCTCAGAGAACACTAATGGAGCTCCCATGGAGCCTAAAGTTTCCTTCGAGGTCATCGGTAGGAACCCTATCTGGGTTCGGAGCAGCAAAAATGGCGAAATCAGAACATTTAAAAGATCGGAAAAGGGCGAGATGGCGCCTGGTGAGTCGTTCTGCGTGATCGCTGAATTCGAAGAAGGGAAGCAAGTTTTTTCGCGTTCTTCTGATTCAGATGATATCGATGTTTCTGGCATTGATCCCGTCAAAGAATTTGGTTTTCTTGTCATGGGACACGAGTTTGAATGTTATGGCAATCGGGTGATTCGTGATGTGAAAAAATGGGACTGGTTTCTGGATGGGCCGAGTAAAGACAGTGATGATGACAATGAAGATTATGAGAGGAAAAAGAAGAGAGGAGTAATCGGAAAGAGAAAAAAAGGAACAAACAGTGACGATGAAGATTGGACAGATGAGAATGAAGATGCTGTTGAAATGATTACGAAAGTACAAAAGTCTCAAAGACCCAAATACTCCACAAGATCAAAAGATCGCAATAAGATTTCTAATGATCAAAGAAAGGCTGCTAAATCTAATAAGAACTATAATGGAGAAGTTGAAGAAGATGAAGATGATGAAACTTTAGGAGGCTTTATTGTAGATGATGAAGTAGATAATGTAGAACAGATGGACGAAGATGAAGAAGAAGAAGAATTTTTAGATGATGAGGAAGATGAGGAAGATTGATGAAGCTAATTGTTATTGGCTGCTCTAACTTAGGCTTGTTCTAGAGAGTTTTGTCTTTGTACATTATTTACCTTTAGTTTCATGTTTGTGAAATATACAAGGATCAGTTTTGTGTTGTATCTCAAATTGTAGTTTGATAATCATCTTCAGAGGCCTTCTTGTAAGTTGTAGTACTCTTTTGTCTCGTGTTGTTAAGAAATTATTCGAGGAGGCCATGCGAGAGAAACCGTGAAAGTATCTTAAATTTATACTCAATAGTTAAGTATTAGCATGCAGATTTTCTTCATCA

Coding sequence (CDS)

ATGGAAATCACCGGCGAAGACGGTTCAAAGTTAGTTCTACGAGAGCCAGTGACAGTATTCGGAAGAGGCTCAGGATTTGCTTCCAAAGATCGAACAATATCTCGTCGTCACATTTTAATTGAAGCTAAAACCTCAGAGAACACTAATGGAGCTCCCATGGAGCCTAAAGTTTCCTTCGAGGTCATCGGTAGGAACCCTATCTGGGTTCGGAGCAGCAAAAATGGCGAAATCAGAACATTTAAAAGATCGGAAAAGGGCGAGATGGCGCCTGGTGAGTCGTTCTGCGTGATCGCTGAATTCGAAGAAGGGAAGCAAGTTTTTTCGCGTTCTTCTGATTCAGATGATATCGATGTTTCTGGCATTGATCCCGTCAAAGAATTTGGTTTTCTTGTCATGGGACACGAGTTTGAATGTTATGGCAATCGGGTGATTCGTGATGTGAAAAAATGGGACTGGTTTCTGGATGGGCCGAGTAAAGACAGTGATGATGACAATGAAGATTATGAGAGGAAAAAGAAGAGAGGAGTAATCGGAAAGAGAAAAAAAGGAACAAACAGTGACGATGAAGATTGGACAGATGAGAATGAAGATGCTGTTGAAATGATTACGAAAGTACAAAAGTCTCAAAGACCCAAATACTCCACAAGATCAAAAGATCGCAATAAGATTTCTAATGATCAAAGAAAGGCTGCTAAATCTAATAAGAACTATAATGGAGAAGTTGAAGAAGATGAAGATGATGAAACTTTAGGAGGCTTTATTGTAGATGATGAAGTAGATAATGTAGAACAGATGGACGAAGATGAAGAAGAAGAAGAATTTTTAGATGATGAGGAAGATGAGGAAGATTGA

Protein sequence

MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFEVIGRNPIWVRSSKNGEIRTFKRSEKGEMAPGESFCVIAEFEEGKQVFSRSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDDDNEDYERKKKRGVIGKRKKGTNSDDEDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQRKAAKSNKNYNGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEEFLDDEEDEED

Homology

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BLAST of CsGy3G038780 vs. NCBI nr
Match: XP_004146848.1 (PREDICTED: nucleolin 1 [Cucumis sativus] >KGN59809.1 hypothetical protein Csa_3G848190 [Cucumis sativus])

HSP 1 Score: 354.4 bits (908), Expect = 3.7e-94
Identity = 216/253 (85.38%), Postives = 216/253 (85.38%), Query Frame = 0


Query: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60
           MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE
Sbjct: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60

Query: 61  VIGRNPIWVRSSKNGE------------IRTFKRSEKGEMAPGESFCVIAEFEEGKQVFS 120
           VIGRNPIWVRSSKNGE                                     EGKQVFS
Sbjct: 61  VIGRNPIWVRSSKNGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKQVFS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDXXXXXX 180
           RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDXXXXXX
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR 240
           XXXXXXXXXXXXXXXXXXXXXDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR 240

Query: 241 KAAKSNKNYNGEV 242
           KAAKSNKNYNGEV
Sbjct: 241 KAAKSNKNYNGEV 253

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BLAST of CsGy3G038780 vs. NCBI nr
Match: XP_022980683.1 (protein BFR2 [Cucurbita maxima])

HSP 1 Score: 326.2 bits (835), Expect = 1.1e-85
Identity = 167/234 (71.37%), Postives = 179/234 (76.50%), Query Frame = 0


Query: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60
           MEI GEDGSKLVLREPVT+FGRGSGFA KDRT+SR HILI+AKTSEN+NG PMEP+VSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFACKDRTVSRCHILIKAKTSENSNGVPMEPRVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFKRSEKGEMAPGESFCV------------IAEFEEGKQVFS 120
           VIG+NPIWVRS KNGEIRTF+ SEKGEM PGESFC+            IAEFEEG+++ S
Sbjct: 61  VIGKNPIWVRSGKNGEIRTFRSSEKGEMVPGESFCMGGQEPMWFQLNKIAEFEEGEKICS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDXXXXXX 180
           RSSDSDDIDVSGIDPVKEFGFL  GHEFECYGNRVIRD KKWDWFLD   KDSD      
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLAKGHEFECYGNRVIRDAKKWDWFLDERRKDSD-DEEDY 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNK 223
                                DWTDENEDAVEMITK +K QRPKYSTRSKDRNK
Sbjct: 181 GRKQKSRVRGKRKKGANNDDEDWTDENEDAVEMITKTKKFQRPKYSTRSKDRNK 233

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BLAST of CsGy3G038780 vs. NCBI nr
Match: XP_023526483.1 (protein BFR2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 323.9 bits (829), Expect = 5.3e-85
Identity = 185/238 (77.73%), Postives = 197/238 (82.77%), Query Frame = 0


Query: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60
           MEI GEDGSKLV REPVT+FGRGSGFA KDRT+SRRHILIEAKTSEN+NG PMEP+VSFE
Sbjct: 1   MEIAGEDGSKLVPREPVTIFGRGSGFACKDRTVSRRHILIEAKTSENSNGVPMEPRVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFKRSEKGEMAPGESFCV------------IAEFEEGKQVFS 120
           VIG+NPIWVRS KNGEIRTF+ SEKGEM PGESFC+            I EFEEG+++ S
Sbjct: 61  VIGKNPIWVRSGKNGEIRTFRCSEKGEMVPGESFCMGGQELMWFELNKIGEFEEGEKICS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDXXXXXX 180
           RSSDS+DIDVSGIDPVKEFGFL  GHEFECYGNRVIRD KKWDWFLD P KDSD XXXXX
Sbjct: 121 RSSDSEDIDVSGIDPVKEFGFLAKGHEFECYGNRVIRDAKKWDWFLDEPRKDSD-XXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISND 227
           XXXXXXXXXXXXXX       DWTDENEDAV MITK +K QRPKYSTRSKD NK   D
Sbjct: 181 XXXXXXXXXXXXXXGANNDDEDWTDENEDAVGMITKTKKFQRPKYSTRSKDSNKTHKD 237

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BLAST of CsGy3G038780 vs. NCBI nr
Match: XP_008447630.1 (PREDICTED: nucleolin 1 [Cucumis melo])

HSP 1 Score: 306.6 bits (784), Expect = 8.7e-80
Identity = 194/253 (76.68%), Postives = 199/253 (78.66%), Query Frame = 0


Query: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60
           MEI GEDGSKLVLREPVT+FGRGSGFASKDRTISRRHILIEAKTS+NTNGAPMEPKVSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFKR------------SEKGEMAPGESFCVIAEFEEGKQVFS 120
           VIGRNPIWVRSSKNGEIRTF+R                            EFEEGK V S
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFRRXXXXXXXXXXXXXXXXXXXXXXXXXXXTEFEEGKLVSS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDXXXXXX 180
           RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKD  XXXXXX
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR 240
           XXXXXXXXXXXXXXXXXXXXX                     PKYSTRSKDRNKISNDQR
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKYSTRSKDRNKISNDQR 240

Query: 241 KAAKSNKNYNGEV 242
           KAAKSNK+Y+GEV
Sbjct: 241 KAAKSNKDYDGEV 253

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BLAST of CsGy3G038780 vs. NCBI nr
Match: XP_022955501.1 (uncharacterized protein LOC111457508 [Cucurbita moschata])

HSP 1 Score: 298.1 bits (762), Expect = 3.1e-77
Identity = 155/216 (71.76%), Postives = 165/216 (76.39%), Query Frame = 0


Query: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60
           MEI GEDGSKLVLREPVT FGRGSGFA KDRT+SRRHILI+AKTSEN+NG PMEP+VSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTTFGRGSGFACKDRTVSRRHILIKAKTSENSNGVPMEPRVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFKRSEKGEMAPGESFCV------------IAEFEEGKQVFS 120
           VIG+NPIWVRS KNGEIRTF+ SEKGEM PGESFC+            IAEFEEG+++ S
Sbjct: 61  VIGKNPIWVRSGKNGEIRTFRSSEKGEMVPGESFCMGGQEPMWFQLNKIAEFEEGEKICS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDXXXXXX 180
           RSSDSDDIDVSGIDPVKEFGFL  GHEFECYGNRVIRD KKWDWFLD   KDSD      
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLAKGHEFECYGNRVIRDAKKWDWFLDEWRKDSD-DDEDY 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXDWTDENEDAVEMITK 205
                             XXX WTDENEDAVEMITK
Sbjct: 181 GRKQKSRVRGKRKKGANNXXXXWTDENEDAVEMITK 215

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BLAST of CsGy3G038780 vs. TAIR10
Match: AT3G13780.1 (SMAD/FHA domain-containing protein )

HSP 1 Score: 139.0 bits (349), Expect = 4.4e-33
Identity = 73/164 (44.51%), Postives = 107/164 (65.24%), Query Frame = 0


Query: 1   MEITGEDGSKLVLREPV-TVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSF 60
           MEI GEDG+KL L+  V  VFGRG+GF ++D T+SRRH+ +  K +    G      VSF
Sbjct: 14  MEIEGEDGTKLFLKTGVKDVFGRGAGFNTEDLTVSRRHVSLVFKPA--AAGTEPSDMVSF 73

Query: 61  EVIGRNPIWVRSSKNG-EIRTFKRSEKGEMAPGESFCVIAEF-------EEGKQVFSRSS 120
           EV+GRNP+W+R+ + G +I+T ++ E GE+A G+ FCV              + +  R+ 
Sbjct: 74  EVLGRNPVWIRAVEKGKKIQTLRKPETGEIATGDQFCVSGNHPIWFTLKRRDEVMEERAL 133

Query: 121 DSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLD 156
           D  +I+++ IDPVKEFGFLV+G EF+ Y    +RD+K+W+WFL+
Sbjct: 134 DHGEIELN-IDPVKEFGFLVIGKEFDQYPKSRVRDIKQWEWFLE 174

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BLAST of CsGy3G038780 vs. TrEMBL
Match: tr|A0A0A0LFR7|A0A0A0LFR7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G848190 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 2.4e-94
Identity = 216/253 (85.38%), Postives = 216/253 (85.38%), Query Frame = 0


Query: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60
           MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE
Sbjct: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60

Query: 61  VIGRNPIWVRSSKNGE------------IRTFKRSEKGEMAPGESFCVIAEFEEGKQVFS 120
           VIGRNPIWVRSSKNGE                                     EGKQVFS
Sbjct: 61  VIGRNPIWVRSSKNGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKQVFS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDXXXXXX 180
           RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDXXXXXX
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR 240
           XXXXXXXXXXXXXXXXXXXXXDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR 240

Query: 241 KAAKSNKNYNGEV 242
           KAAKSNKNYNGEV
Sbjct: 241 KAAKSNKNYNGEV 253

[Close]

BLAST of CsGy3G038780 vs. TrEMBL
Match: tr|A0A1S3BHB4|A0A1S3BHB4_CUCME (nucleolin 1 OS=Cucumis melo OX=3656 GN=LOC103490042 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 5.8e-80
Identity = 194/253 (76.68%), Postives = 199/253 (78.66%), Query Frame = 0


Query: 1   MEITGEDGSKLVLREPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSFE 60
           MEI GEDGSKLVLREPVT+FGRGSGFASKDRTISRRHILIEAKTS+NTNGAPMEPKVSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE 60

Query: 61  VIGRNPIWVRSSKNGEIRTFKR------------SEKGEMAPGESFCVIAEFEEGKQVFS 120
           VIGRNPIWVRSSKNGEIRTF+R                            EFEEGK V S
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFRRXXXXXXXXXXXXXXXXXXXXXXXXXXXTEFEEGKLVSS 120

Query: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDXXXXXX 180
           RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKD  XXXXXX
Sbjct: 121 RSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNKISNDQR 240
           XXXXXXXXXXXXXXXXXXXXX                     PKYSTRSKDRNKISNDQR
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKYSTRSKDRNKISNDQR 240

Query: 241 KAAKSNKNYNGEV 242
           KAAKSNK+Y+GEV
Sbjct: 241 KAAKSNKDYDGEV 253

[Close]

BLAST of CsGy3G038780 vs. TrEMBL
Match: tr|A0A1Q3DEH7|A0A1Q3DEH7_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_34237 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 3.5e-45
Identity = 107/240 (44.58%), Postives = 143/240 (59.58%), Query Frame = 0


Query: 1   MEITGEDGSKLVLR-EPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKVSF 60
           MEI GEDGS+  L+ +  TVFGRGSGF ++DR++SRRH+L + ++  +      EP+V F
Sbjct: 1   MEIEGEDGSRTKLKPDSKTVFGRGSGFNTEDRSVSRRHVLFQVQSPVSKTDTQTEPRVYF 60

Query: 61  EVIGRNPIWVRSSKNGE-IRTFKRSEKGEMAPGESFCVIAEFEEGKQVFSRSSDSDDIDV 120
           EV+G+NPIWVRS K+GE IR ++R E G +  G+ FCV  +      + S +  ++ ID 
Sbjct: 61  EVLGKNPIWVRSKKDGEDIRVYRRLESGYVEAGDWFCVSGQXXXXFSIRSGNEMAEVIDA 120

Query: 121 SGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGPSKDSDXXXXXXXXXXXXXXXX 180
           S IDPVKEFGFLV+GHEF+ Y  R I D+K WDWFL+ P+KDSD                
Sbjct: 121 STIDPVKEFGFLVIGHEFDQYPKRKISDMKDWDWFLEEPAKDSD-DDEVFEGNGKRGIKK 180

Query: 181 XXXXXXXXXXXDWTDENEDAVEMITKVQKSQRPKYSTRSKDRNK----ISNDQRKAAKSN 235
                      DWT E E   ++ITK++K  R  YSTRSK+R K    + N QR     N
Sbjct: 181 KRKKPEGNEDDDWTSERECDKDLITKLRKVSRSNYSTRSKNREKGQKRVRNGQRLTIGKN 239

[Close]

BLAST of CsGy3G038780 vs. TrEMBL
Match: tr|A0A2I4GXF0|A0A2I4GXF0_9ROSI (uncharacterized protein LOC109011735 isoform X1 OS=Juglans regia OX=51240 GN=LOC109011735 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.3e-44
Identity = 107/261 (41.00%), Postives = 149/261 (57.09%), Query Frame = 0


Query: 1   MEITGEDGSKLVLR---EPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKV 60
           ME+ GEDGS++ L+      T FGRG GF + DRT+SRRH+L E KTS++ + +     V
Sbjct: 1   MEVEGEDGSRIALQNGPNHKTFFGRGLGFHTDDRTVSRRHVLFEVKTSDDKSRSLTGATV 60

Query: 61  SFEVIGRNPIWVRSSKNGEIRTFKRSEKGEMAPGESFC---------------------- 120
           SFEV+G+NPIWV++S  GEIR ++  EKGE+A G+ FC                      
Sbjct: 61  SFEVVGKNPIWVKNSGCGEIRVYRSGEKGEVAAGDCFCLSGKRPVRFSVQGRGFGAAEKR 120

Query: 121 VIAEFEEGKQVFSRSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLD 180
           V+   +E     +   +   IDVS IDPVKEFGFLVMGHEF+ Y  ++IRD+K WDWFL+
Sbjct: 121 VLGSEDELDASLTSGFEFGGIDVSEIDPVKEFGFLVMGHEFDHYPKQMIRDIKNWDWFLE 180

Query: 181 GPSKDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXDWTDENEDAVEMITKVQKSQRPKYST 237
            P +DSD                           +WT E++D  E++ K++K +RPKY T
Sbjct: 181 EPGRDSD-DDAYLEKKVKRGVMRKRRKAEGNNDDNWTGESDDDGELVAKLRKVERPKYLT 240

[Close]

BLAST of CsGy3G038780 vs. TrEMBL
Match: tr|A0A2I4GXH1|A0A2I4GXH1_9ROSI (uncharacterized protein LOC109011735 isoform X2 OS=Juglans regia OX=51240 GN=LOC109011735 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.3e-44
Identity = 107/261 (41.00%), Postives = 149/261 (57.09%), Query Frame = 0


Query: 1   MEITGEDGSKLVLR---EPVTVFGRGSGFASKDRTISRRHILIEAKTSENTNGAPMEPKV 60
           ME+ GEDGS++ L+      T FGRG GF + DRT+SRRH+L E KTS++ + +     V
Sbjct: 1   MEVEGEDGSRIALQNGPNHKTFFGRGLGFHTDDRTVSRRHVLFEVKTSDDKSRSLTGATV 60

Query: 61  SFEVIGRNPIWVRSSKNGEIRTFKRSEKGEMAPGESFC---------------------- 120
           SFEV+G+NPIWV++S  GEIR ++  EKGE+A G+ FC                      
Sbjct: 61  SFEVVGKNPIWVKNSGCGEIRVYRSGEKGEVAAGDCFCLSGKRPVRFSVQGRGFGAAEKR 120

Query: 121 VIAEFEEGKQVFSRSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLD 180
           V+   +E     +   +   IDVS IDPVKEFGFLVMGHEF+ Y  ++IRD+K WDWFL+
Sbjct: 121 VLGSEDELDASLTSGFEFGGIDVSEIDPVKEFGFLVMGHEFDHYPKQMIRDIKNWDWFLE 180

Query: 181 GPSKDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXDWTDENEDAVEMITKVQKSQRPKYST 237
            P +DSD                           +WT E++D  E++ K++K +RPKY T
Sbjct: 181 EPGRDSD-DDAYLEKKVKRGVMRKRRKAEGNNDDNWTGESDDDGELVAKLRKVERPKYLT 240

The following BLAST results are available for this feature:

BLAST of CsGy3G038780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146848.1	3.7e-94	85.38	PREDICTED: nucleolin 1 [Cucumis sativus] >KGN59809.1 hypothetical protein Csa_3G...	[more]
XP_022980683.1	1.1e-85	71.37	protein BFR2 [Cucurbita maxima]	[more]
XP_023526483.1	5.3e-85	77.73	protein BFR2 [Cucurbita pepo subsp. pepo]	[more]
XP_008447630.1	8.7e-80	76.68	PREDICTED: nucleolin 1 [Cucumis melo]	[more]
XP_022955501.1	3.1e-77	71.76	uncharacterized protein LOC111457508 [Cucurbita moschata]	[more]

BLAST of CsGy3G038780 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G13780.1	4.4e-33	44.51	SMAD/FHA domain-containing protein	[more]

BLAST of CsGy3G038780 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy3G038780 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LFR7\|A0A0A0LFR7_CUCSA	2.4e-94	85.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G848190 PE=4 SV=1	[more]
tr\|A0A1S3BHB4\|A0A1S3BHB4_CUCME	5.8e-80	76.68	nucleolin 1 OS=Cucumis melo OX=3656 GN=LOC103490042 PE=4 SV=1	[more]
tr\|A0A1Q3DEH7\|A0A1Q3DEH7_CEPFO	3.5e-45	44.58	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_34237 PE=4...	[more]
tr\|A0A2I4GXF0\|A0A2I4GXF0_9ROSI	2.3e-44	41.00	uncharacterized protein LOC109011735 isoform X1 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A2I4GXH1\|A0A2I4GXH1_9ROSI	2.3e-44	41.00	uncharacterized protein LOC109011735 isoform X2 OS=Juglans regia OX=51240 GN=LOC...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR008984	SMAD_FHA_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G038780.1	CsGy3G038780.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:2.60.200.20		coord: 3..107 e-value: 7.5E-14 score: 53.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..283
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 240..283
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 212..239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..173
None	No IPR available	PANTHER	PTHR37733	FAMILY NOT NAMED	coord: 1..96 coord: 108..283
IPR008984	SMAD/FHA domain superfamily	SUPERFAMILY	SSF49879	SMAD/FHA domain	coord: 5..99

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G038780	Cla012601	Watermelon (97103) v1	cgybwmB203
CsGy3G038780	Csa3G848190	Cucumber (Chinese Long) v2	cgybcuB110
CsGy3G038780	MELO3C013088	Melon (DHL92) v3.5.1	cgybmeB177
CsGy3G038780	ClCG07G013830	Watermelon (Charleston Gray)	cgybwcgB236
CsGy3G038780	CSPI03G41310	Wild cucumber (PI 183967)	cgybcpiB111
CsGy3G038780	CmaCh14G012580	Cucurbita maxima (Rimu)	cgybcmaB309
CsGy3G038780	CmoCh14G012930	Cucurbita moschata (Rifu)	cgybcmoB282
CsGy3G038780	Lsi07G005830	Bottle gourd (USVL1VR-Ls)	cgyblsiB221
CsGy3G038780	Cp4.1LG03g14440	Cucurbita pepo (Zucchini)	cgybcpeB399
CsGy3G038780	MELO3C013088.2	Melon (DHL92) v3.6.1	cgybmedB179
CsGy3G038780	CsaV3_3G043760	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G038780	Bhi01G002127	Wax gourd	cgybwgoB277
CsGy3G038780	Carg06431	Silver-seed gourd	carcgybB0124

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G038780	Cucumber (Chinese Long) v3	cgybcucB155
CsGy3G038780	Watermelon (97103) v2	cgybwmbB229
CsGy3G038780	Watermelon (97103) v2	cgybwmbB249
CsGy3G038780	Wax gourd	cgybwgoB332
CsGy3G038780	Cucurbita pepo (Zucchini)	cgybcpeB305
CsGy3G038780	Cucurbita pepo (Zucchini)	cgybcpeB350
CsGy3G038780	Cucumber (Gy14) v2	cgybcgybB114
CsGy3G038780	Cucurbita maxima (Rimu)	cgybcmaB347
CsGy3G038780	Cucurbita maxima (Rimu)	cgybcmaB360
CsGy3G038780	Cucurbita maxima (Rimu)	cgybcmaB460
CsGy3G038780	Cucurbita moschata (Rifu)	cgybcmoB319
CsGy3G038780	Cucurbita moschata (Rifu)	cgybcmoB331
CsGy3G038780	Cucurbita moschata (Rifu)	cgybcmoB427
CsGy3G038780	Cucurbita pepo (Zucchini)	cgybcpeB389
CsGy3G038780	Cucumber (Chinese Long) v2	cgybcuB149
CsGy3G038780	Bottle gourd (USVL1VR-Ls)	cgyblsiB159
CsGy3G038780	Melon (DHL92) v3.5.1	cgybmeB158
CsGy3G038780	Melon (DHL92) v3.6.1	cgybmedB156
CsGy3G038780	Watermelon (Charleston Gray)	cgybwcgB170
CsGy3G038780	Watermelon (97103) v1	cgybwmB178
CsGy3G038780	Wild cucumber (PI 183967)	cgybcpiB152
CsGy3G038780	Silver-seed gourd	carcgybB0211
CsGy3G038780	Silver-seed gourd	carcgybB1008