CsaV3_3G038780 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GCACTTTGAACAATTTTATTATTTGTGTTGGTTGGGAGGAATTTGTATAATTTGTGTAAGGTTAATAAAATAAAACAAAGGTTCATTATGAGGTCAAGTCTAGTGCTTCTATCTCTGAGCTCGAACCGACCCCGATCCATGGCCGCTTTCATTCACTGTCTCCAGGAGCAAAAGAGTTCCATTTAACTTATTACTTATTACCCACCGGAGCTTCCGTTTTTGGGGCCTTAATCCTTCTGTTTCCAGATGATGAACGGTGGCGGCATCAAAACGGCACTCCTCAATCCCCACGCAGATTGTTTTATCTTGAAAACTGCTTTTTTTCATTCTACGTCTGTCCTCGACCGCAAAAGACGAAGTTATTGGGATTCTGTGAGTTTCTTCTCATGCAATTGTTCATCTCGTTTGGTCTTATGGTGCTTGCTTTATATGTATAACAATAGCGTGGATGAGACCATAATCCTTCTTTCTTGGATTTTTTTTTTATAAAAGGAATGGTATGTTGCATCGTTTAAATTAGTGTATTTTGGGCTTTCTCATATCAAATTATAGATTTTGTGTATTCAGTTTGAATTTTCTGTTTTGGAGGGAGAATTTAGTGAGTACAGCTGGGCAGGTTTTCAGTGGCGGCAAGAATGTGTTTGATGGAACCATTTCTGAATCTTTGAGCAATACAATCTTTTAAAAAGTGGGATCACTTAACAAATCAGCTATACTACAATTTGGCTTCCAGCTCCCTGTAGCATTCAATCACCATCTGTCCATTCTAGCTAATGAACAACTTATGAACAAGTTGAATATAAGGATTTATTAGTTATTAGTCATGAAATTGGTAAGTTTGCAGTAGCTGTGACTGTGAATGGATGATTTGGCTGCGAGTACGGAAGTACTTGATTTTTTCTTAGTACAAAAAAATCCAAGCCCGCAAGAATAAACTCCACTAGAGAAAAGCTTTCCAACTAAGTAAAACATTGCTTAGAGAATAATTTCAAAAAGTCTTCAAAATCGTAGCCCATAGAGAAGCATGGAACCTCCCAAGGAACAAACTTCACAAGGGTCCCTTATCCACACCTCAAAACACTCTATTGTTCTTCTCCCCCCAAATATCCCACAATAAAACACACACCCTTGTGAACCACAAAAAACGGTCTCTCTTTGAAAGGTCGGATGGAGGTGGAACTCCCTGATCATCAAACGCCTTTTCAAATCATGGATCCCTTCTCTGTTTTTTCAAATCATTTGCAGGATTACTATTCCATAGGCACATTAGATGATGTGAAGCGAACAACTTAACTTCCTTTTCCTTGTTGAATTTTCTGAATGTGGTCACGTATAGGGTTGCTTTTTGGCAATTCTGTTTGATATAGTAGAATTTGAATAACAATGTCTCCTGTATTCTAATACTTTAAAACTTATGATTATTTTGTTATGGAAGTCTTATCTCGAATTTTAGATGGTAGGCTGCAACCTGATATGTTTGAGAGCCAGACATTATGAGAATTAGCGGTGTGTTTTCTGAGACTCAAGATAAGAAGTGTCATCGATAAAGAGACTGCGGACCAATTTTTTCTTTAATTCTTTTGAACTTATTGTTGTTACATAGTAATCTGGATACTAACTAGTTGCTCAAAATGAACACTCCCTATAATGAATCTCTTGCATTATGTTTTGTACTAATATTCATACACTTTTCTACAGAGATGCAACCACTATACGAAGAGTTTTAGAAGGATTAATACAAAACAATCATTGCTGCGCAATGTCAGTGCCTATGCAGAATTCCTCTTTCAGGTTGCATTAGTTGCCCTGTTACTTCGCTACTGAATACTTTTCCATTATCCCGCTTCTTCATTGAAATCAGCTTTCAATACCCATATAGCTCATAGGAGATAGGGTTCTTTGATAAAACTCTATGACTTGAAGTTTCATCTTTGCATTGTGAGGAGTTTCTACTGTTCTCTTGTTAAAATCTCAAAGATGGAGTTGTTCCTTTTTTATGATGCTAGAATAAAGGTAGAAATTAGAGTTTTCATCACCTTTTTAAAGCCATTTCAGTAACCTTGTTCATTTGGACAAGTCTTCTCAGTCACAGTCCAATTTTTTTTTTAGCTTTAGTCACTGCTTCACACAAGGTCATTTCTATGCTTTTGGTGGGACATGTTAACTAACAATTAACATCTGACTGATGATCCTGGATATCCTGCTCATAAAAATTCAAAACATTTTAGTTTTGACCTGAATAGTATTAAATATGGTTTTACTTTCAAAAGGATTTTTGCATCATTCTTGTTGCTTTCGGAATTTCAGAGTTGGCGGGATGAGGTTGAGGCTAATGGTCCTTCCTCGAGTAGCGGCACTTCATGGTTTAAAAGTCACTCATTTAGGGGCTCTAAAAGAGACAGGACCAACCAGAAACCACGGTGTTCAAGCAGAAGTAAGTAACCTCTTTATTACACATCCTCCAGTCCACAATACTAATGTATATTGGCACTCACTATTTTTTGTTTTAATGTAAAAAAGAAAAAAGAGGAATAAATAAATAAATAAAATATCATTTAAACCGTCTATTTGTTTTTACAATCTAGAAGCTGCGGAGTTGTACTCATAATGGTTTGCAAGTAAAAGGACTGGTATGACATGTATTGCAACACTTAGTTTCATTTGCAATGATTTCTAAAAGATATTTTTCTTTCAAAGTTCTAAGCCATGACTTATTTTTTGGAGAGATGAGCCATTTCTTTGATTACATTGGTGATGGCAGCATATCCATTTTGGATCTCTCTAACATTTTAAAAATCATGTTGACTGCTGGTCTTATTCCTTAATGGTGTTAGATTGAGATGTCTAGCTTGTTTGGCAAATTATTTAGAAAGATGACTTTAGTTTTTTAAAACATGGGAGGATTGTGTATAACAAAACAAATGGATAACAAAACAAAGAGACTTATGTCATGTTTATAATCTTCTTCAAACAAGCCAAAAACCAAAAAACAAATGGCTACCAAACAAAGTCTTAATGTTATTGCTCCCGTGATCGTCTTTATTTTTAAGAATTAGGATCAAATGGATTCTGTAAAGTTCAGCATGTGGGAAATTAGAATCACTAATATTTCAAAAAATAAAATTAAAATCACTGTTCACAAATCTGTAAAAGAATATATAAAGAATAAAAAAAATCTTCTATTCACAAAATCTGTGATTAGAAAATGAAAAGTTACTTTCATTTGTTCTAAGAAAATAGAACTCTCACTCAGCTAGTTATCTCTGAATTTTTGTTCTAATTCTTCCTCATCAGGTTTTGAGTTTACTGAAGATGATCCTGATGTTGAGACTGTCTTCAAATCTGCATTTGGTGGGAATCGGTCTTATTACTGGTCTTTTATTAATGAAGAGAATCCTCAATGGAAGAGCTCAACAAATAACTCTAATAACTATAGGAGATCTTGGACATGGCAACATAACTCAAATACCTATGGGAGATCTTGGAGCTGGCAACATAGGGTTGATGAAGATTATGACTCTTCTAATGAATACGAGAATTCAGAGGCTAATTTGGTGTCGCATAGGCTTGCTCTTGGACTACAAGCGTCTGGTCCACTCAAACTTGAAGATGTTAAAAATGCGTGAGCTTTCATTCTGATCACTTTGACTTTGCATCACTCAAGTGTAGAACATTCTATCTTGTCTTTGATAGAGAATCAGCGATGCTGAAAGGCTCTCTCTTGAATCTTCTTTCAATTTCTGTACTTTTTTTCAATCTTTTGAACTTTCTTCTTCCATTTTAGGTATCGAGCATGTGCAATGAAATGGCATCCAGATCGTCACCAAGGTTCCTCCAAGGTAGTAGTCTAAGGAGCATTGAGCTAGCGTTTCAATGTTAGCTACAAGCCAAAATTTGGACACTTAGACACTTGTTGGACAAACTTCAAACACTCCTTAGCACGATAGTTATACTTTACATTCTAGTTGTATAAAGTCAAATATAGGCCCATGCTAGATATGTTGTGAATCCTTGTTAAGTACTAAACAGATACTAAAAATTATACAAATATATATACAAAAAACATTTATAGAAAAAAGAGATACAAAAAATTATAGGACAAAAGTAATAAATTTTGAGTGCAAAATACTTTAAACTTCTTTTTATAGGTGATATAAATGCATAAACTTATTAATTTAGAATTTTTTTTAGATGTATAAAAATGACATTTTAATAACCGTCTCCCTGTTATATGTGTCCTGTATTTTCATAAACTGACGTGTCTCTCTGTCATATCCGTATCTCTGCATAATAGGGGGTAGCACCACCATGAACCCCCAATATCAATAGGATAGACATATCAATCTTTCAGTATCTGTATGCTGCAATACTGATTGATAACTCAAATGCAGGTGATGGCGGAGGAGAAGTTCAAAGTTTGCAGTGTGGCATACAAATCATTGTGCAACAAGTTAGCGGTAAATTAAGAATAGCATCTTCCTAACCTTCATCTTCATCCAAATTCCAACGTATTGCAGATCATTAAAGATGCTGTCACACACATAGTAAGCTTTTTCTTTCATATCTTGATCTCAACACTTATTTTGATATGATAATGGAACTGTCATATCTGAAGTTTTGTTTATTATTTAATGCTGACTATTTGTCTGGCAAGCATGTACTACTGTGTCCGTTTTTATACGGTATCAATAATTATAGTAGGAAAGTTGTATAATTTACTGTTGTTTTTAACTATAATGAACTACTTAACATGTTTGAGACTCTGGAATAAGAACATTTTGAAAAAAATACACATGTAGTGATTAGCTATCTCTTCTTTGACTCTTCAGTGGTGGTTGATAATTTTTTGGTCGATGAAGTGAAAAAAAAGATCTTGCTAATAGAGCTTTTTCAGAGATTTACTGGGTATTGTGTCTCGATAATCTCTAATCTTTTAGTCCAG ATGATGAACGGTGGCGGCATCAAAACGGCACTCCTCAATCCCCACGCAGATTGTTTTATCTTGAAAACTGCTTTTTTTCATTCTACGTCTGTCCTCGACCGCAAAAGACGAAGTTATTGGGATTCTAGATGCAACCACTATACGAAGAGTTTTAGAAGGATTAATACAAAACAATCATTGCTGCGCAATGTCAGTGCCTATGCAGAATTCCTCTTTCAGAGTTGGCGGGATGAGGTTGAGGCTAATGGTCCTTCCTCGAGTAGCGGCACTTCATGGTTTAAAAGTCACTCATTTAGGGGCTCTAAAAGAGACAGGACCAACCAGAAACCACGGTGTTCAAGCAGAAGTTTTGAGTTTACTGAAGATGATCCTGATGTTGAGACTGTCTTCAAATCTGCATTTGGTGGGAATCGGTCTTATTACTGGTCTTTTATTAATGAAGAGAATCCTCAATGGAAGAGCTCAACAAATAACTCTAATAACTATAGGAGATCTTGGACATGGCAACATAACTCAAATACCTATGGGAGATCTTGGAGCTGGCAACATAGGGTTGATGAAGATTATGACTCTTCTAATGAATACGAGAATTCAGAGGCTAATTTGGTGTCGCATAGGCTTGCTCTTGGACTACAAGCGTCTGGTCCACTCAAACTTGAAGATGTTAAAAATGCGTATCGAGCATGTGCAATGAAATGGCATCCAGATCGTCACCAAGGTTCCTCCAAGGTGATGGCGGAGGAGAAGTTCAAAGTTTGCAGTGTGGCATACAAATCATTGTGCAACAAGTTAGCGGTAAATTAA ATGATGAACGGTGGCGGCATCAAAACGGCACTCCTCAATCCCCACGCAGATTGTTTTATCTTGAAAACTGCTTTTTTTCATTCTACGTCTGTCCTCGACCGCAAAAGACGAAGTTATTGGGATTCTAGATGCAACCACTATACGAAGAGTTTTAGAAGGATTAATACAAAACAATCATTGCTGCGCAATGTCAGTGCCTATGCAGAATTCCTCTTTCAGAGTTGGCGGGATGAGGTTGAGGCTAATGGTCCTTCCTCGAGTAGCGGCACTTCATGGTTTAAAAGTCACTCATTTAGGGGCTCTAAAAGAGACAGGACCAACCAGAAACCACGGTGTTCAAGCAGAAGTTTTGAGTTTACTGAAGATGATCCTGATGTTGAGACTGTCTTCAAATCTGCATTTGGTGGGAATCGGTCTTATTACTGGTCTTTTATTAATGAAGAGAATCCTCAATGGAAGAGCTCAACAAATAACTCTAATAACTATAGGAGATCTTGGACATGGCAACATAACTCAAATACCTATGGGAGATCTTGGAGCTGGCAACATAGGGTTGATGAAGATTATGACTCTTCTAATGAATACGAGAATTCAGAGGCTAATTTGGTGTCGCATAGGCTTGCTCTTGGACTACAAGCGTCTGGTCCACTCAAACTTGAAGATGTTAAAAATGCGTATCGAGCATGTGCAATGAAATGGCATCCAGATCGTCACCAAGGTTCCTCCAAGGTGATGGCGGAGGAGAAGTTCAAAGTTTGCAGTGTGGCATACAAATCATTGTGCAACAAGTTAGCGGTAAATTAA MMNGGGIKTALLNPHADCFILKTAFFHSTSVLDRKRRSYWDSRCNHYTKSFRRINTKQSLLRNVSAYAEFLFQSWRDEVEANGPSSSSGTSWFKSHSFRGSKRDRTNQKPRCSSRSFEFTEDDPDVETVFKSAFGGNRSYYWSFINEENPQWKSSTNNSNNYRRSWTWQHNSNTYGRSWSWQHRVDEDYDSSNEYENSEANLVSHRLALGLQASGPLKLEDVKNAYRACAMKWHPDRHQGSSKVMAEEKFKVCSVAYKSLCNKLAVN
BLAST of CsaV3_3G038780 vs. NCBI nr
Match: XP_004136566.1 (PREDICTED: uncharacterized protein LOC101221203 [Cucumis sativus] >KGN59297.1 hypothetical protein Csa_3G806290 [Cucumis sativus]) HSP 1 Score: 513.8 bits (1322), Expect = 3.4e-142 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0
BLAST of CsaV3_3G038780 vs. NCBI nr
Match: XP_008443050.1 (PREDICTED: uncharacterized protein LOC103486761 [Cucumis melo]) HSP 1 Score: 463.0 bits (1190), Expect = 6.9e-127 Identity = 245/268 (91.42%), Postives = 254/268 (94.78%), Query Frame = 0
BLAST of CsaV3_3G038780 vs. NCBI nr
Match: XP_022158327.1 (dnaJ homolog subfamily C member 7 homolog [Momordica charantia]) HSP 1 Score: 424.5 bits (1090), Expect = 2.7e-115 Identity = 210/269 (78.07%), Postives = 230/269 (85.50%), Query Frame = 0
BLAST of CsaV3_3G038780 vs. NCBI nr
Match: XP_022930351.1 (dnaJ homolog subfamily C member 7 homolog [Cucurbita moschata]) HSP 1 Score: 422.5 bits (1085), Expect = 1.0e-114 Identity = 209/269 (77.70%), Postives = 230/269 (85.50%), Query Frame = 0
BLAST of CsaV3_3G038780 vs. NCBI nr
Match: XP_022971359.1 (uncharacterized protein LOC111470107 [Cucurbita maxima]) HSP 1 Score: 422.5 bits (1085), Expect = 1.0e-114 Identity = 208/269 (77.32%), Postives = 231/269 (85.87%), Query Frame = 0
BLAST of CsaV3_3G038780 vs. TAIR10
Match: AT2G42080.1 (Chaperone DnaJ-domain superfamily protein) HSP 1 Score: 195.3 bits (495), Expect = 4.9e-50 Identity = 131/265 (49.43%), Postives = 164/265 (61.89%), Query Frame = 0
BLAST of CsaV3_3G038780 vs. TAIR10
Match: AT3G58020.1 (Chaperone DnaJ-domain superfamily protein) HSP 1 Score: 176.4 bits (446), Expect = 2.3e-44 Identity = 126/266 (47.37%), Postives = 159/266 (59.77%), Query Frame = 0
BLAST of CsaV3_3G038780 vs. TAIR10
Match: AT2G18465.1 (Chaperone DnaJ-domain superfamily protein) HSP 1 Score: 84.0 bits (206), Expect = 1.6e-16 Identity = 86/256 (33.59%), Postives = 125/256 (48.83%), Query Frame = 0
BLAST of CsaV3_3G038780 vs. TAIR10
Match: AT1G59725.1 (DNAJ heat shock family protein) HSP 1 Score: 47.0 bits (110), Expect = 2.1e-05 Identity = 22/41 (53.66%), Postives = 27/41 (65.85%), Query Frame = 0
BLAST of CsaV3_3G038780 vs. TAIR10
Match: AT3G08910.1 (DNAJ heat shock family protein) HSP 1 Score: 46.2 bits (108), Expect = 3.7e-05 Identity = 25/50 (50.00%), Postives = 30/50 (60.00%), Query Frame = 0
BLAST of CsaV3_3G038780 vs. Swiss-Prot
Match: sp|A9BNG6|DNAJ_DELAS (Chaperone protein DnaJ OS=Delftia acidovorans (strain DSM 14801 / SPH-1) OX=398578 GN=dnaJ PE=3 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 2.1e-05 Identity = 23/41 (56.10%), Postives = 29/41 (70.73%), Query Frame = 0
BLAST of CsaV3_3G038780 vs. Swiss-Prot
Match: sp|A1VMG1|DNAJ_POLNA (Chaperone protein DnaJ OS=Polaromonas naphthalenivorans (strain CJ2) OX=365044 GN=dnaJ PE=3 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 3.5e-05 Identity = 22/41 (53.66%), Postives = 29/41 (70.73%), Query Frame = 0
BLAST of CsaV3_3G038780 vs. Swiss-Prot
Match: sp|Q128K1|DNAJ_POLSJ (Chaperone protein DnaJ OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) OX=296591 GN=dnaJ PE=3 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 4.6e-05 Identity = 22/44 (50.00%), Postives = 30/44 (68.18%), Query Frame = 0
BLAST of CsaV3_3G038780 vs. Swiss-Prot
Match: sp|A1TLH8|DNAJ_ACIAC (Chaperone protein DnaJ OS=Acidovorax citrulli (strain AAC00-1) OX=397945 GN=dnaJ PE=3 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 6.0e-05 Identity = 23/41 (56.10%), Postives = 28/41 (68.29%), Query Frame = 0
BLAST of CsaV3_3G038780 vs. Swiss-Prot
Match: sp|A1WAR7|DNAJ_ACISJ (Chaperone protein DnaJ OS=Acidovorax sp. (strain JS42) OX=232721 GN=dnaJ PE=3 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 6.0e-05 Identity = 22/41 (53.66%), Postives = 29/41 (70.73%), Query Frame = 0
BLAST of CsaV3_3G038780 vs. TrEMBL
Match: tr|A0A0A0LF16|A0A0A0LF16_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G806290 PE=4 SV=1) HSP 1 Score: 513.8 bits (1322), Expect = 2.3e-142 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0
BLAST of CsaV3_3G038780 vs. TrEMBL
Match: tr|A0A1S3B7X5|A0A1S3B7X5_CUCME (uncharacterized protein LOC103486761 OS=Cucumis melo OX=3656 GN=LOC103486761 PE=4 SV=1) HSP 1 Score: 463.0 bits (1190), Expect = 4.6e-127 Identity = 245/268 (91.42%), Postives = 254/268 (94.78%), Query Frame = 0
BLAST of CsaV3_3G038780 vs. TrEMBL
Match: tr|A0A2P4ING2|A0A2P4ING2_QUESU (Chaperone protein dnaj OS=Quercus suber OX=58331 GN=CFP56_69631 PE=4 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 3.8e-81 Identity = 162/270 (60.00%), Postives = 197/270 (72.96%), Query Frame = 0
BLAST of CsaV3_3G038780 vs. TrEMBL
Match: tr|B9SXJ3|B9SXJ3_RICCO (Heat shock protein binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0503950 PE=4 SV=1) HSP 1 Score: 305.8 bits (782), Expect = 9.3e-80 Identity = 153/266 (57.52%), Postives = 197/266 (74.06%), Query Frame = 0
BLAST of CsaV3_3G038780 vs. TrEMBL
Match: tr|A0A2I4HQN3|A0A2I4HQN3_9ROSI (uncharacterized protein LOC109020456 isoform X1 OS=Juglans regia OX=51240 GN=LOC109020456 PE=4 SV=1) HSP 1 Score: 287.0 bits (733), Expect = 4.5e-74 Identity = 166/264 (62.88%), Postives = 201/264 (76.14%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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