CsaV3_3G037490 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G037490
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionSenescence regulator
Locationchr3 : 30951315 .. 30952772 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TAATAAGTTTATACATTTCTTAAATTTTTACTAAAAATATTGAATCCTTAAAATGCATCTTTTTAAAAATGGGTTTTTGTTTTTTTATTAAGGAAATTAAAAAGAAAGTTGAGAGCAATGATTTCTTTTCCATTTAAAAGGCATGTTGACATTTGGTAGACAGAGTGCGTCAGAGAAGAACATCGAGGACGCCGACGGTCACGAACTTTCGGTGCAATTTTTCCCAATTTCCCAAAATTCACCTTTTCCCAATTTTCTCCTTTTCTTCTTCTTTTTTCTTTCTTTAATTCCCCATTTCACCCTCTCTCTTCGCCGCATCACACACTCATCTTCCATATCCCAAATGGACCTTTACACCGCCGCTTCTCTTCTCTCCCACTCCTCTCCTTCCTCCCACCACTTCCTCCACTTCTCCTCTTCCCCTCCCTCGCATACTCCCCCCGCCCTCTCCCCCTCCGACGAGTTCAACGAATCCGAGCTCTTCTGGACTGCTGATTTCGTCCAATCATCCAATAACTCCTCCCGCTCCAGGAAAATCTCTACCGATGATCGCGCCTCCAGTTTCATCCCTCCTCCAAACTCCGGCATCCTCGCCGCTTTATCTGATGATTTCAATTACGATCGGAAAAAGAGAATCGGAACGATTCTGACTCGAGATACTACTTCAATTACGAAATCCCCGTCGTCGTCGACGCGATCAATTCCAAGGCCGGTTCAGAGTAATAGAGAATACTCACAATCCGTGCCTTGTAGGAAATTTCAGCAATCGGCTCCGATCAAAGTGCCGGAAGCGATGAGGAAAGGGAGGAATGATCGGGATCATGTTGAGAGGAAGGAGGAGGAGGAGGAGGAGGAGGAGCAGATGTTACCACCTCATGAGATAGTGAGGAGAGGCTCCGGCATGTCGCCAAATACGACATTTTCGGTGCTGGAAGGGGCGGGAAGGACGCTGAAAGGGAGGGATCTTCGTCGAGTTAGAAACGCCGTTTGGCACAGAACAGGATTTGTTGATTGAAATATGGGGTTTGGTTTGACTTTGAATTTTGAACTCCGGTGATCTTCTTCCTCAACTCCATCCGTTTTTTTTTTTCTCTTTTTGTGTAGAACTAGAAACTGGAAAAGGGGAAGCGTTTTTCTTCTTCATCCTCCTCTGTTCGATCAGTTTTTAGCTTTCATAGATGCGAGGAATGAAAGAAATCAATCCAGAAATTTTAGCTCAAATTATAGGTCGCCGCCTGTGATCGGAATTTCTTGTTGTTTGTTTTTTGTTTTTTGTTTTCTGTTTTGTTTTTCCAATTCTTACCTATACATTACCATTGATCTATCTATTGCATTAATTTCAAGTACATATTTGTAATTTTTCATTAAGCTTAATTCCTAGTTATATCAAGAAGATATATACTCAATTACATTAATTGTTGGTTTAAGAAAATTTTATTATAAAAATAAAATTGACAA

mRNA sequence

ATGTTGACATTTGGTAGACAGAGTGCGTCAGAGAAGAACATCGAGGACGCCGACGGTCACGAACTTTCGGTGCAATTTTTCCCAATTTCCCAAAATTCACCTTTTCCCAATTTTCTCCTTTTCTTCTTCTTTTTTCTTTCTTTAATTCCCCATTTCACCCTCTCTCTTCGCCGCATCACACACTCATCTTCCATATCCCAAATGGACCTTTACACCGCCGCTTCTCTTCTCTCCCACTCCTCTCCTTCCTCCCACCACTTCCTCCACTTCTCCTCTTCCCCTCCCTCGCATACTCCCCCCGCCCTCTCCCCCTCCGACGAGTTCAACGAATCCGAGCTCTTCTGGACTGCTGATTTCGTCCAATCATCCAATAACTCCTCCCGCTCCAGGAAAATCTCTACCGATGATCGCGCCTCCAGTTTCATCCCTCCTCCAAACTCCGGCATCCTCGCCGCTTTATCTGATGATTTCAATTACGATCGGAAAAAGAGAATCGGAACGATTCTGACTCGAGATACTACTTCAATTACGAAATCCCCGTCGTCGTCGACGCGATCAATTCCAAGGCCGGTTCAGAGTAATAGAGAATACTCACAATCCGTGCCTTGTAGGAAATTTCAGCAATCGGCTCCGATCAAAGTGCCGGAAGCGATGAGGAAAGGGAGGAATGATCGGGATCATGTTGAGAGGAAGGAGGAGGAGGAGGAGGAGGAGGAGCAGATGTTACCACCTCATGAGATAGTGAGGAGAGGCTCCGGCATGTCGCCAAATACGACATTTTCGGTGCTGGAAGGGGCGGGAAGGACGCTGAAAGGGAGGGATCTTCGTCGAGTTAGAAACGCCGTTTGGCACAGAACAGGATTTGTTGATTGA

Coding sequence (CDS)

ATGTTGACATTTGGTAGACAGAGTGCGTCAGAGAAGAACATCGAGGACGCCGACGGTCACGAACTTTCGGTGCAATTTTTCCCAATTTCCCAAAATTCACCTTTTCCCAATTTTCTCCTTTTCTTCTTCTTTTTTCTTTCTTTAATTCCCCATTTCACCCTCTCTCTTCGCCGCATCACACACTCATCTTCCATATCCCAAATGGACCTTTACACCGCCGCTTCTCTTCTCTCCCACTCCTCTCCTTCCTCCCACCACTTCCTCCACTTCTCCTCTTCCCCTCCCTCGCATACTCCCCCCGCCCTCTCCCCCTCCGACGAGTTCAACGAATCCGAGCTCTTCTGGACTGCTGATTTCGTCCAATCATCCAATAACTCCTCCCGCTCCAGGAAAATCTCTACCGATGATCGCGCCTCCAGTTTCATCCCTCCTCCAAACTCCGGCATCCTCGCCGCTTTATCTGATGATTTCAATTACGATCGGAAAAAGAGAATCGGAACGATTCTGACTCGAGATACTACTTCAATTACGAAATCCCCGTCGTCGTCGACGCGATCAATTCCAAGGCCGGTTCAGAGTAATAGAGAATACTCACAATCCGTGCCTTGTAGGAAATTTCAGCAATCGGCTCCGATCAAAGTGCCGGAAGCGATGAGGAAAGGGAGGAATGATCGGGATCATGTTGAGAGGAAGGAGGAGGAGGAGGAGGAGGAGGAGCAGATGTTACCACCTCATGAGATAGTGAGGAGAGGCTCCGGCATGTCGCCAAATACGACATTTTCGGTGCTGGAAGGGGCGGGAAGGACGCTGAAAGGGAGGGATCTTCGTCGAGTTAGAAACGCCGTTTGGCACAGAACAGGATTTGTTGATTGA

Protein sequence

MLTFGRQSASEKNIEDADGHELSVQFFPISQNSPFPNFLLFFFFFLSLIPHFTLSLRRITHSSSISQMDLYTAASLLSHSSPSSHHFLHFSSSPPSHTPPALSPSDEFNESELFWTADFVQSSNNSSRSRKISTDDRASSFIPPPNSGILAALSDDFNYDRKKRIGTILTRDTTSITKSPSSSTRSIPRPVQSNREYSQSVPCRKFQQSAPIKVPEAMRKGRNDRDHVERKEEEEEEEEQMLPPHEIVRRGSGMSPNTTFSVLEGAGRTLKGRDLRRVRNAVWHRTGFVD
Homology
[Close]
BLAST of CsaV3_3G037490 vs. NCBI nr
Match: XP_011652020.1 (PREDICTED: uncharacterized protein LOC105434977 [Cucumis sativus] >KGN59155.1 hypothetical protein Csa_3G777630 [Cucumis sativus])

HSP 1 Score: 339.7 bits (870), Expect = 9.6e-90
Identity = 198/223 (88.79%), Postives = 198/223 (88.79%), Query Frame = 0 

Query: 68  MDLYTAASLLXXXXXXXXXXXXXXXXXXXXXXXXXSPSDEFNESELFWTADFVQSSNNSS 127
           MDLYTAASLL                         SPSDEFNESELFWTADFVQSSNNSS
Sbjct: 1   MDLYTAASLLSHSSPSSHHFLHFSSSPPSHTPPALSPSDEFNESELFWTADFVQSSNNSS 60

Query: 128 RSRKISTDDRASSFIPPPNSGILAALSDDFNYDRKKRIGTILTRDTTSITKSPSSSTRSI 187
           RSRKISTDDRASSFIPPPNSGILAALSDDFNYDRKKRIGTILTRDTTSITKSPSSSTRSI
Sbjct: 61  RSRKISTDDRASSFIPPPNSGILAALSDDFNYDRKKRIGTILTRDTTSITKSPSSSTRSI 120

Query: 188 PRPVQSNREYSQSVPCRKFQQSAPIKVPEAMRKGRNDRDHVEXXXXXXXXXXXXXXXXXI 247
           PRPVQSNREYSQSVPCRKFQQSAPIKVPEAMRKGRNDRDHVEXXXXXXXXXXXXXXXXXI
Sbjct: 121 PRPVQSNREYSQSVPCRKFQQSAPIKVPEAMRKGRNDRDHVEXXXXXXXXXXXXXXXXXI 180

Query: 248 VRRGSGMSPNTTFSVLEGAGRTLKGRDLRRVRNAVWHRTGFVD 291
           VRRGSGMSPNTTFSVLEGAGRTLKGRDLRRVRNAVWHRTGFVD
Sbjct: 181 VRRGSGMSPNTTFSVLEGAGRTLKGRDLRRVRNAVWHRTGFVD 223

[Close]
BLAST of CsaV3_3G037490 vs. NCBI nr
Match: XP_022943240.1 (uncharacterized protein LOC111448027 [Cucurbita moschata])

HSP 1 Score: 216.9 bits (551), Expect = 9.4e-53
Identity = 134/187 (71.66%), Postives = 155/187 (82.89%), Query Frame = 0 

Query: 105 SDEFNESELFWTADFVQSSNNSSRSRKISTDDRASSFIPPPNSGILAALSDDFNYDRKKR 164
           SDEFNESE+FWT+DF QS+N   R+RKIST+DR SSF   PNSGILAALSDD +++ K+R
Sbjct: 93  SDEFNESEVFWTSDFAQSNNRPFRTRKISTEDRTSSF-DLPNSGILAALSDDADFNSKQR 152

Query: 165 IGTILTRDTTSITKSPSSSTRSIPRPVQSNREYSQSVPCRKFQQSAPIKVPEAMRKGR-N 224
           IGTI+TR+T+      SSS+RSIP+P+QS+REYSQS+P RKFQQSAPI VP+AMRK R N
Sbjct: 153 IGTIVTRETSMAMAISSSSSRSIPKPIQSSREYSQSMPSRKFQQSAPINVPKAMRKQRIN 212

Query: 225 DRDHVEXXXXXXXXXXXXXXXXXIVRRGSGMSPNTTFSVLEGAGRTLKGRDLRRVRNAVW 284
           D      XXXXXXXXXXXXXX  IV RG G+ PNTTFS+LEG GRTLKGRDLR+VRNAVW
Sbjct: 213 DE---ICXXXXXXXXXXXXXXHEIVARGVGVMPNTTFSMLEGVGRTLKGRDLRQVRNAVW 272

Query: 285 HRTGFVD 291
           HRTGFVD
Sbjct: 273 HRTGFVD 275

[Close]
BLAST of CsaV3_3G037490 vs. NCBI nr
Match: XP_023005734.1 (uncharacterized protein LOC111498642 [Cucurbita maxima])

HSP 1 Score: 216.1 bits (549), Expect = 1.6e-52
Identity = 132/186 (70.97%), Postives = 153/186 (82.26%), Query Frame = 0 

Query: 105 SDEFNESELFWTADFVQSSNNSSRSRKISTDDRASSFIPPPNSGILAALSDDFNYDRKKR 164
           SDEFNESE+FWT+DF QS+N   R+RKIST+DR SSF  PPNSGILAALSDD +++ K+R
Sbjct: 41  SDEFNESEVFWTSDFAQSNNRPFRTRKISTEDRTSSF-DPPNSGILAALSDDADFNSKQR 100

Query: 165 IGTILTRDTTSITKSPSSSTRSIPRPVQSNREYSQSVPCRKFQQSAPIKVPEAMRKGRND 224
           IGTI+TR+TT      SSS+R IP+P+QS++EYSQS+P RKFQQSAPI VP+AMRK    
Sbjct: 101 IGTIVTRETTMAMAISSSSSRWIPKPIQSSKEYSQSMPSRKFQQSAPINVPKAMRK---X 160

Query: 225 RDHVEXXXXXXXXXXXXXXXXXIVRRGSGMSPNTTFSVLEGAGRTLKGRDLRRVRNAVWH 284
                XXXXXXXXXXXXXXX  IV RG G+ PNTTFS+LEG GRTLKGRDLR+VRNAVWH
Sbjct: 161 XXXXXXXXXXXXXXXXXXXXHEIVARGVGVMPNTTFSMLEGVGRTLKGRDLRQVRNAVWH 220

Query: 285 RTGFVD 291
           RTGFVD
Sbjct: 221 RTGFVD 222

[Close]
BLAST of CsaV3_3G037490 vs. NCBI nr
Match: XP_023539527.1 (uncharacterized protein LOC111800167 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 203.4 bits (516), Expect = 1.1e-48
Identity = 126/186 (67.74%), Postives = 151/186 (81.18%), Query Frame = 0 

Query: 105 SDEFNESELFWTADFVQSSNNSSRSRKISTDDRASSFIPPPNSGILAALSDDFNYDRKKR 164
           SDEFNESE+FWT+DF QS+N   R+RKIST+DR SSF    NSGILAALSD+ +++ ++R
Sbjct: 41  SDEFNESEVFWTSDFAQSNNRPFRTRKISTEDRTSSF-DLSNSGILAALSDNADFNSEQR 100

Query: 165 IGTILTRDTTSITKSPSSSTRSIPRPVQSNREYSQSVPCRKFQQSAPIKVPEAMRKGRND 224
           IGTI+TR+T+      SSS+RSIP+P+QS+REYSQS+P RKFQQSAPI VP++M   +  
Sbjct: 101 IGTIVTRETSMAMAISSSSSRSIPKPIQSSREYSQSMPSRKFQQSAPINVPKSM---KXX 160

Query: 225 RDHVEXXXXXXXXXXXXXXXXXIVRRGSGMSPNTTFSVLEGAGRTLKGRDLRRVRNAVWH 284
                XXXXXXXXXXXXXXX  IV RG G+ PNTTFS+LEG GRTLKGRDLR+VRNAVWH
Sbjct: 161 XXXXXXXXXXXXXXXXXXXXHEIVARGVGVMPNTTFSMLEGVGRTLKGRDLRQVRNAVWH 220

Query: 285 RTGFVD 291
           RTGFVD
Sbjct: 221 RTGFVD 222

[Close]
BLAST of CsaV3_3G037490 vs. NCBI nr
Match: XP_008442865.1 (PREDICTED: uncharacterized protein LOC103486633 [Cucumis melo])

HSP 1 Score: 190.3 bits (482), Expect = 9.4e-45
Identity = 116/127 (91.34%), Postives = 119/127 (93.70%), Query Frame = 0 

Query: 164 RIGTILTRDTTSITKSPSSSTRSIPRPVQSNREYSQSVPCRKFQQSAPIKVPEAMRKGRN 223
           RIGTILTRD TSITKSPSSS RSIPRPVQSNR+YSQSVPCRKFQQSAPIKVPEAMRK RN
Sbjct: 99  RIGTILTRD-TSITKSPSSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPIKVPEAMRKDRN 158

Query: 224 DRDHVEXXXXXXXXXXXXXXXXXIVRRGSGMSPNTTFSVLEGAGRTLKGRDLRRVRNAVW 283
           + +HVE   XXXXXXXXXXXXX IVRRGSGMSPNTTFSVLEGAGRTLKGRDLRRVRNAVW
Sbjct: 159 NGEHVE---XXXXXXXXXXXXXEIVRRGSGMSPNTTFSVLEGAGRTLKGRDLRRVRNAVW 218

Query: 284 HRTGFVD 291
           HRTGFVD
Sbjct: 219 HRTGFVD 221

[Close]
BLAST of CsaV3_3G037490 vs. TAIR10
Match: AT3G15040.1 (Protein of unknown function, DUF584)

HSP 1 Score: 63.5 bits (153), Expect = 2.4e-10
Identity = 59/109 (54.13%), Postives = 72/109 (66.06%), Query Frame = 0 

Query: 188 PRPVQSNREYSQS-VPCRKFQQSAPIKVP--EAMRKGRNDRDHV---EXXXXXXXXXXXX 247
           P+P Q    +S S V   K+ QSAP++VP   +    R+ ++      XXXXXXXXXXXX
Sbjct: 135 PKPPQERLPFSASFVGGGKYPQSAPVQVPLVSSAMMNRHKKEFKLTDXXXXXXXXXXXXX 194

Query: 248 XXXXXIVRRGSGMSPNTTFSVLEGAGRTLKGRDLRRVRNAVWHRTGFVD 291
           XXX  IV R    S   + SVLEGAGRTLKGRDLR+VRNAV+ RTGF+D
Sbjct: 195 XXXHEIVARSLAQSSLLSCSVLEGAGRTLKGRDLRQVRNAVFRRTGFID 243

[Close]
BLAST of CsaV3_3G037490 vs. TAIR10
Match: AT4G21970.1 (Protein of unknown function, DUF584)

HSP 1 Score: 51.6 bits (122), Expect = 9.5e-07
Identity = 37/126 (29.37%), Postives = 57/126 (45.24%), Query Frame = 0 

Query: 169 LTRDTTSITKSPSSSTRSIPRPVQSNREYSQSVPCRKFQQSAPIKVPEAMR----KGRND 228
           +++     + S SSS R IP+           V     Q SAP+ +P+  +      +N 
Sbjct: 28  MSKSNNLFSASSSSSARYIPK--------GNEVSGGAKQSSAPMNIPDWSKVYGYSKKNT 87

Query: 229 RDHVEXXXXXXXXXXXXXXXXXIVRRGSGMSPNTTFSVLEGAGRTLKGRDLRRVRNAVWH 288
             H+                  +V +    +  ++FS+ EG GRTLKGRDL + RNAV  
Sbjct: 88  SSHLHSWAIDDDDEGSMVPPHELVAKRLARTQISSFSMCEGIGRTLKGRDLSKTRNAVLT 145

Query: 289 RTGFVD 291
           RTGF++
Sbjct: 148 RTGFLE 145

[Close]
BLAST of CsaV3_3G037490 vs. TAIR10
Match: AT3G45210.1 (Protein of unknown function, DUF584)

HSP 1 Score: 50.8 bits (120), Expect = 1.6e-06
Identity = 22/32 (68.75%), Postives = 27/32 (84.38%), Query Frame = 0 

Query: 259 TFSVLEGAGRTLKGRDLRRVRNAVWHRTGFVD 291
           +FSV EG GRTLKGRD+ RVRNA+  +TGF+D
Sbjct: 117 SFSVHEGIGRTLKGRDMSRVRNAILEKTGFLD 148

[Close]
BLAST of CsaV3_3G037490 vs. TAIR10
Match: AT4G04630.1 (Protein of unknown function, DUF584)

HSP 1 Score: 49.3 bits (116), Expect = 4.7e-06
Identity = 21/33 (63.64%), Postives = 28/33 (84.85%), Query Frame = 0 

Query: 258 TTFSVLEGAGRTLKGRDLRRVRNAVWHRTGFVD 291
           ++FS+ EG GRTLKGRDL +VRNAV  +TGF++
Sbjct: 136 SSFSMCEGVGRTLKGRDLSKVRNAVLSKTGFLE 168

[Close]
BLAST of CsaV3_3G037490 vs. TAIR10
Match: AT5G60680.1 (Protein of unknown function, DUF584)

HSP 1 Score: 49.3 bits (116), Expect = 4.7e-06
Identity = 22/32 (68.75%), Postives = 26/32 (81.25%), Query Frame = 0 

Query: 259 TFSVLEGAGRTLKGRDLRRVRNAVWHRTGFVD 291
           +FSV EG GRTLKGRDL RVRNA++ + GF D
Sbjct: 132 SFSVHEGVGRTLKGRDLSRVRNAIFEKFGFQD 163

[Close]
BLAST of CsaV3_3G037490 vs. TrEMBL
Match: tr|A0A0A0LAY5|A0A0A0LAY5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G777630 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 6.3e-90
Identity = 198/223 (88.79%), Postives = 198/223 (88.79%), Query Frame = 0 

Query: 68  MDLYTAASLLXXXXXXXXXXXXXXXXXXXXXXXXXSPSDEFNESELFWTADFVQSSNNSS 127
           MDLYTAASLL                         SPSDEFNESELFWTADFVQSSNNSS
Sbjct: 1   MDLYTAASLLSHSSPSSHHFLHFSSSPPSHTPPALSPSDEFNESELFWTADFVQSSNNSS 60

Query: 128 RSRKISTDDRASSFIPPPNSGILAALSDDFNYDRKKRIGTILTRDTTSITKSPSSSTRSI 187
           RSRKISTDDRASSFIPPPNSGILAALSDDFNYDRKKRIGTILTRDTTSITKSPSSSTRSI
Sbjct: 61  RSRKISTDDRASSFIPPPNSGILAALSDDFNYDRKKRIGTILTRDTTSITKSPSSSTRSI 120

Query: 188 PRPVQSNREYSQSVPCRKFQQSAPIKVPEAMRKGRNDRDHVEXXXXXXXXXXXXXXXXXI 247
           PRPVQSNREYSQSVPCRKFQQSAPIKVPEAMRKGRNDRDHVEXXXXXXXXXXXXXXXXXI
Sbjct: 121 PRPVQSNREYSQSVPCRKFQQSAPIKVPEAMRKGRNDRDHVEXXXXXXXXXXXXXXXXXI 180

Query: 248 VRRGSGMSPNTTFSVLEGAGRTLKGRDLRRVRNAVWHRTGFVD 291
           VRRGSGMSPNTTFSVLEGAGRTLKGRDLRRVRNAVWHRTGFVD
Sbjct: 181 VRRGSGMSPNTTFSVLEGAGRTLKGRDLRRVRNAVWHRTGFVD 223

[Close]
BLAST of CsaV3_3G037490 vs. TrEMBL
Match: tr|A0A1S3B6S2|A0A1S3B6S2_CUCME (uncharacterized protein LOC103486633 OS=Cucumis melo OX=3656 GN=LOC103486633 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 6.2e-45
Identity = 116/127 (91.34%), Postives = 119/127 (93.70%), Query Frame = 0 

Query: 164 RIGTILTRDTTSITKSPSSSTRSIPRPVQSNREYSQSVPCRKFQQSAPIKVPEAMRKGRN 223
           RIGTILTRD TSITKSPSSS RSIPRPVQSNR+YSQSVPCRKFQQSAPIKVPEAMRK RN
Sbjct: 99  RIGTILTRD-TSITKSPSSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPIKVPEAMRKDRN 158

Query: 224 DRDHVEXXXXXXXXXXXXXXXXXIVRRGSGMSPNTTFSVLEGAGRTLKGRDLRRVRNAVW 283
           + +HVE   XXXXXXXXXXXXX IVRRGSGMSPNTTFSVLEGAGRTLKGRDLRRVRNAVW
Sbjct: 159 NGEHVE---XXXXXXXXXXXXXEIVRRGSGMSPNTTFSVLEGAGRTLKGRDLRRVRNAVW 218

Query: 284 HRTGFVD 291
           HRTGFVD
Sbjct: 219 HRTGFVD 221

[Close]
BLAST of CsaV3_3G037490 vs. TrEMBL
Match: tr|A0A165YTL5|A0A165YTL5_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_013411 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.4e-25
Identity = 83/185 (44.86%), Postives = 107/185 (57.84%), Query Frame = 0 

Query: 107 EFNESELFWTADFVQSSNNSSRSRKISTD-DRASSFIPPPNSGILAALSDDFNYDRKKRI 166
           E NE ++FWT DF Q+++  S S  +     R  +F  P  +GILAALS++     +K  
Sbjct: 38  ELNEDDVFWTGDFSQANHQRSVSGDLDRKVQRRQAFGEPERNGILAALSEN-----RKPN 97

Query: 167 GTILTRDTTSITKSPSSSTRSIPRPVQSNREYSQSVPCRKFQQSAPIKVPEAMRKGRNDR 226
             +L R  +    S S    +IP+P Q  R+YSQS+P RKFQQSAP+ VP    K RN+ 
Sbjct: 98  RPVLYRKPS--IASSSRVIPAIPKPPQ-ERDYSQSMPARKFQQSAPVNVPMMQMKARNEL 157

Query: 227 DHVEXXXXXXXXXXXXXXXXXIVRRGSGMSPNTTFSVLEGAGRTLKGRDLRRVRNAVWHR 286
             V+                 +V RGSG +P TT SVLEG GRTLKGRDLR VRNAVW +
Sbjct: 158 ADVD---IDLDAEEEMLPPHELVARGSGNAPATTSSVLEGVGRTLKGRDLRLVRNAVWRQ 211

Query: 287 TGFVD 291
           TGF+D
Sbjct: 218 TGFLD 211

[Close]
BLAST of CsaV3_3G037490 vs. TrEMBL
Match: tr|A0A2R6R7Q7|A0A2R6R7Q7_ACTCH (MORC family CW-type zinc finger protein like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc08415 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.4e-25
Identity = 83/189 (43.92%), Postives = 106/189 (56.08%), Query Frame = 0 

Query: 106 DEFNESELFWTADFVQSSNNSSRSRKIST--DDRASSFIPPPNSGILAALSDDFNYDRKK 165
           DE NE E+FWT DF + +  S+    +S   D    SF  P  SGILAAL+++       
Sbjct: 42  DELNEDEVFWTGDFSEPNRRSTLPSSVSARGDQNHYSFRQPEESGILAALAEN------P 101

Query: 166 RIGTILTRDTTSITKSPSSSTRSIPRPVQSNRE--YSQSVPCRKFQQSAPIKVPEAMRKG 225
           +   +  + TT++T S S    +IP+P   +RE  YS SVP  KF QSAP+ VP   RK 
Sbjct: 102 KRPVVYRKPTTAVTSS-SRLLPAIPKPPPQDRERDYSPSVPAWKFHQSAPMNVPVVPRKV 161

Query: 226 RNDRDHVEXXXXXXXXXXXXXXXXXIVRRGSGMSPNTTFSVLEGAGRTLKGRDLRRVRNA 285
           RN    +                  IV RGS + P TTFSVLEG GRTLKGRDLR+VRNA
Sbjct: 162 RN--GELAALDDGDEDDDEMLPPHEIVARGSAILPKTTFSVLEGVGRTLKGRDLRQVRNA 221

Query: 286 VWHRTGFVD 291
           V+ +TGF+D
Sbjct: 222 VFRKTGFID 221

[Close]
BLAST of CsaV3_3G037490 vs. TrEMBL
Match: tr|A0A1J6HYC6|A0A1J6HYC6_NICAT (Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_15919 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.4e-25
Identity = 83/197 (42.13%), Postives = 105/197 (53.30%), Query Frame = 0 

Query: 106 DEFNESELFWTA-DFVQSSNNSSRSRKISTDDRASSFIPPPNSGILAALSDDFNYD---- 165
           DE NE ++FWT  DF +S     RS   S + R  SF+     GILAALS+D        
Sbjct: 45  DELNEDDVFWTGRDFTESQR---RSTSPSQNSRRQSFLKHDKFGILAALSEDHRKTDLPV 104

Query: 166 -RKKRIGTILTRDTTSITKSPSS------STRSIPRPVQSNREYSQSVPCRKFQQSAPIK 225
            R+K   T     T  I+ SPS+      +   IP+P   N  +S+S+P RKFQ SAP+ 
Sbjct: 105 LRRKSSITSSPSGTAPISASPSTVIAFSRAIPLIPKPPSDNFNHSKSMPARKFQHSAPVN 164

Query: 226 VPEAMRKGRNDRDHVEXXXXXXXXXXXXXXXXXIVRRGSGMSPNTTFSVLEGAGRTLKGR 285
           VP   +K   + D  +                 +V RGS  SP TTFS+LEG GRTLKGR
Sbjct: 165 VPMMPKKAPRNGDLADIEIDEDDADDEMLPPHEMVARGSMRSPRTTFSMLEGVGRTLKGR 224

Query: 286 DLRRVRNAVWHRTGFVD 291
           DLR+VRNAVW +TGF D
Sbjct: 225 DLRQVRNAVWRQTGFQD 238

The following BLAST results are available for this feature:
BLAST of CsaV3_3G037490 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011652020.19.6e-9088.79PREDICTED: uncharacterized protein LOC105434977 [Cucumis sativus] >KGN59155.1 hy... [more]
XP_022943240.19.4e-5371.66uncharacterized protein LOC111448027 [Cucurbita moschata][more]
XP_023005734.11.6e-5270.97uncharacterized protein LOC111498642 [Cucurbita maxima][more]
XP_023539527.11.1e-4867.74uncharacterized protein LOC111800167 [Cucurbita pepo subsp. pepo][more]
XP_008442865.19.4e-4591.34PREDICTED: uncharacterized protein LOC103486633 [Cucumis melo][more]
BLAST of CsaV3_3G037490 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G15040.12.4e-1054.13Protein of unknown function, DUF584[more]
AT4G21970.19.5e-0729.37Protein of unknown function, DUF584[more]
AT3G45210.11.6e-0668.75Protein of unknown function, DUF584[more]
AT4G04630.14.7e-0663.64Protein of unknown function, DUF584[more]
AT5G60680.14.7e-0668.75Protein of unknown function, DUF584[more]
BLAST of CsaV3_3G037490 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G037490 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LAY5|A0A0A0LAY5_CUCSA6.3e-9088.79Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G777630 PE=4 SV=1[more]
tr|A0A1S3B6S2|A0A1S3B6S2_CUCME6.2e-4591.34uncharacterized protein LOC103486633 OS=Cucumis melo OX=3656 GN=LOC103486633 PE=... [more]
tr|A0A165YTL5|A0A165YTL5_DAUCA1.4e-2544.86Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_013411 ... [more]
tr|A0A2R6R7Q7|A0A2R6R7Q7_ACTCH1.4e-2543.92MORC family CW-type zinc finger protein like OS=Actinidia chinensis var. chinens... [more]
tr|A0A1J6HYC6|A0A1J6HYC6_NICAT1.4e-2542.13Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_15919 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007608Senescence_reg_S40
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G037490.1CsaV3_3G037490.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 218..238
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..243
NoneNo IPR availablePANTHERPTHR33083:SF42SUBFAMILY NOT NAMEDcoord: 79..290
NoneNo IPR availablePANTHERPTHR33083FAMILY NOT NAMEDcoord: 79..290
IPR007608Senescence regulator S40PFAMPF04520Senescence_regcoord: 107..290
e-value: 8.6E-40
score: 137.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G037490CSPI03G35130Wild cucumber (PI 183967)cpicucB145
CsaV3_3G037490CSPI01G14840Wild cucumber (PI 183967)cpicucB030
CsaV3_3G037490Cucsa.241360Cucumber (Gy14) v1cgycucB363
CsaV3_3G037490Cucsa.319820Cucumber (Gy14) v1cgycucB498
CsaV3_3G037490CmaCh06G004910Cucurbita maxima (Rimu)cmacucB0966
CsaV3_3G037490CmoCh06G004920Cucurbita moschata (Rifu)cmocucB0954
CsaV3_3G037490Cp4.1LG08g10040Cucurbita pepo (Zucchini)cpecucB1057
CsaV3_3G037490CsGy3G032630Cucumber (Gy14) v2cgybcucB117
CsaV3_3G037490Carg25884Silver-seed gourdcarcucB0644
CsaV3_3G037490Cla017672Watermelon (97103) v1cucwmB208
CsaV3_3G037490MELO3C009492Melon (DHL92) v3.5.1cucmeB218
CsaV3_3G037490ClCG10G018740Watermelon (Charleston Gray)cucwcgB199
CsaV3_3G037490Lsi03G018730Bottle gourd (USVL1VR-Ls)cuclsiB203
CsaV3_3G037490MELO3C009492.2Melon (DHL92) v3.6.1cucmedB211
CsaV3_3G037490Cla97C10G201780Watermelon (97103) v2cucwmbB187
CsaV3_3G037490Bhi11G001943Wax gourdcucwgoB229
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CsaV3_3G037490CsaV3_1G014950Cucumber (Chinese Long) v3cuccucB023
The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G037490Cucumber (Chinese Long) v3cuccucB136
CsaV3_3G037490Cucumber (Chinese Long) v3cuccucB139
CsaV3_3G037490Silver-seed gourdcarcucB0269
CsaV3_3G037490Silver-seed gourdcarcucB0279
CsaV3_3G037490Silver-seed gourdcarcucB0445
CsaV3_3G037490Silver-seed gourdcarcucB0846
CsaV3_3G037490Cucumber (Gy14) v2cgybcucB268
CsaV3_3G037490Cucumber (Gy14) v2cgybcucB272
CsaV3_3G037490Cucumber (Gy14) v1cgycucB084
CsaV3_3G037490Cucumber (Gy14) v1cgycucB296
CsaV3_3G037490Cucurbita maxima (Rimu)cmacucB0279
CsaV3_3G037490Cucurbita maxima (Rimu)cmacucB0658
CsaV3_3G037490Cucurbita maxima (Rimu)cmacucB0720
CsaV3_3G037490Cucurbita maxima (Rimu)cmacucB0788
CsaV3_3G037490Cucurbita maxima (Rimu)cmacucB1014
CsaV3_3G037490Cucurbita moschata (Rifu)cmocucB0270
CsaV3_3G037490Cucurbita moschata (Rifu)cmocucB0644
CsaV3_3G037490Cucurbita moschata (Rifu)cmocucB0708
CsaV3_3G037490Cucurbita moschata (Rifu)cmocucB0771
CsaV3_3G037490Cucurbita moschata (Rifu)cmocucB0997
CsaV3_3G037490Cucurbita pepo (Zucchini)cpecucB0069
CsaV3_3G037490Cucurbita pepo (Zucchini)cpecucB0341
CsaV3_3G037490Cucurbita pepo (Zucchini)cpecucB0594
CsaV3_3G037490Cucurbita pepo (Zucchini)cpecucB0747
CsaV3_3G037490Wild cucumber (PI 183967)cpicucB337
CsaV3_3G037490Wild cucumber (PI 183967)cpicucB334
CsaV3_3G037490Bottle gourd (USVL1VR-Ls)cuclsiB178
CsaV3_3G037490Bottle gourd (USVL1VR-Ls)cuclsiB185
CsaV3_3G037490Melon (DHL92) v3.5.1cucmeB234
CsaV3_3G037490Melon (DHL92) v3.5.1cucmeB261
CsaV3_3G037490Melon (DHL92) v3.6.1cucmedB226
CsaV3_3G037490Melon (DHL92) v3.6.1cucmedB256
CsaV3_3G037490Watermelon (Charleston Gray)cucwcgB224
CsaV3_3G037490Watermelon (Charleston Gray)cucwcgB216
CsaV3_3G037490Watermelon (97103) v1cucwmB275
CsaV3_3G037490Watermelon (97103) v1cucwmB277
CsaV3_3G037490Watermelon (97103) v2cucwmbB198
CsaV3_3G037490Watermelon (97103) v2cucwmbB205
CsaV3_3G037490Wax gourdcucwgoB337