Carg25884 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25884
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Senescence regulator
Location	Cucurbita_argyrosperma_scaffold_350 : 55246 .. 56073 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAAACCGACGGGCACTGCCACGTCAGACTGGCCCCCACCACGTGACGAACTTTCGGTGCAAATTTTCACTTTCCCCAATTTTCCTTCAATTCTCCACTTCACCGTCGATCCGCCGCGGTTCCTTTTTGCAAATACACAAATGGACTCTTCCCCCGCCGCCGCTTCCGCCGCTGCTAGTGCCTTTACTCTCCGGCATTCCTCTTCTCCTAGCCATCACTACCTCGATCTCTTCTCTTCCCCGCCGCCGTTATCCCCCTCTGCTGTCGCCAGCTCTGATGAGTTCAACGAATCAGAGGTCTTCTGGACCTCTGATTTCGCGCAATCCAATAACCGTCCGTTTCGCACGAGAAAAATATCTACCGAAGATCGCACCTCGAGTTTCGACCTTCCAAACTCCGGTATCCTCGCTGCCTTATCAGATGATGCCGATTTTAATAGCAAACAGAGAATCGGTACGATTGTCACTCGAGAGACTTCAATGGCTATGGCTATATCCTCCTCATCGTCACGATCGATTCCGAAGCCGATTCAGAGCAGTAGAGAATATTCTCAATCGATGCCGTCTAGGAAGTTTCAGCAATCGGCGCCGATTAACGTGCCGAAGGCGATGAGGAAACAGAGGATTAATGACGAGATTTGTGCGGCGGCGGAGGAGGAGGAGGATGAAGAGATGCTGCCGCCGCATGAGATCGTGGCAAGAGGCGTGGGCGTGATGCCGAACACGACATTTTCGATGCTGGAAGGCGTTGGAAGAACTCTGAAAGGGAGGGATCTTCGTCAAGTCAGAAACGCGGTATGGCACAGAACAGGTTTTGTTGATTGA

mRNA sequence

ATGAGGAAACCGACGGGCACTGCCACGTCAGACTGGCCCCCACCACGTGACGAACTTTCGGTGCAAATTTTCACTTTCCCCAATTTTCCTTCAATTCTCCACTTCACCGTCGATCCGCCGCGGTTCCTTTTTGCAAATACACAAATGGACTCTTCCCCCGCCGCCGCTTCCGCCGCTGCTAGTGCCTTTACTCTCCGGCATTCCTCTTCTCCTAGCCATCACTACCTCGATCTCTTCTCTTCCCCGCCGCCGTTATCCCCCTCTGCTGTCGCCAGCTCTGATGAGTTCAACGAATCAGAGGTCTTCTGGACCTCTGATTTCGCGCAATCCAATAACCGTCCGTTTCGCACGAGAAAAATATCTACCGAAGATCGCACCTCGAGTTTCGACCTTCCAAACTCCGGTATCCTCGCTGCCTTATCAGATGATGCCGATTTTAATAGCAAACAGAGAATCGGTACGATTGTCACTCGAGAGACTTCAATGGCTATGGCTATATCCTCCTCATCGTCACGATCGATTCCGAAGCCGATTCAGAGCAGTAGAGAATATTCTCAATCGATGCCGTCTAGGAAGTTTCAGCAATCGGCGCCGATTAACGTGCCGAAGGCGATGAGGAAACAGAGGATTAATGACGAGATTTGTGCGGCGGCGGAGGAGGAGGAGGATGAAGAGATGCTGCCGCCGCATGAGATCGTGGCAAGAGGCGTGGGCGTGATGCCGAACACGACATTTTCGATGCTGGAAGGCGTTGGAAGAACTCTGAAAGGGAGGGATCTTCGTCAAGTCAGAAACGCGGTATGGCACAGAACAGGTTTTGTTGATTGA

Coding sequence (CDS)

ATGAGGAAACCGACGGGCACTGCCACGTCAGACTGGCCCCCACCACGTGACGAACTTTCGGTGCAAATTTTCACTTTCCCCAATTTTCCTTCAATTCTCCACTTCACCGTCGATCCGCCGCGGTTCCTTTTTGCAAATACACAAATGGACTCTTCCCCCGCCGCCGCTTCCGCCGCTGCTAGTGCCTTTACTCTCCGGCATTCCTCTTCTCCTAGCCATCACTACCTCGATCTCTTCTCTTCCCCGCCGCCGTTATCCCCCTCTGCTGTCGCCAGCTCTGATGAGTTCAACGAATCAGAGGTCTTCTGGACCTCTGATTTCGCGCAATCCAATAACCGTCCGTTTCGCACGAGAAAAATATCTACCGAAGATCGCACCTCGAGTTTCGACCTTCCAAACTCCGGTATCCTCGCTGCCTTATCAGATGATGCCGATTTTAATAGCAAACAGAGAATCGGTACGATTGTCACTCGAGAGACTTCAATGGCTATGGCTATATCCTCCTCATCGTCACGATCGATTCCGAAGCCGATTCAGAGCAGTAGAGAATATTCTCAATCGATGCCGTCTAGGAAGTTTCAGCAATCGGCGCCGATTAACGTGCCGAAGGCGATGAGGAAACAGAGGATTAATGACGAGATTTGTGCGGCGGCGGAGGAGGAGGAGGATGAAGAGATGCTGCCGCCGCATGAGATCGTGGCAAGAGGCGTGGGCGTGATGCCGAACACGACATTTTCGATGCTGGAAGGCGTTGGAAGAACTCTGAAAGGGAGGGATCTTCGTCAAGTCAGAAACGCGGTATGGCACAGAACAGGTTTTGTTGATTGA

Protein sequence

MRKPTGTATSDWPPPRDELSVQIFTFPNFPSILHFTVDPPRFLFANTQMDSSPAAASAAASAFTLRHSSSPSHHYLDLFSSPPPLSPSAVASSDEFNESEVFWTSDFAQSNNRPFRTRKISTEDRTSSFDLPNSGILAALSDDADFNSKQRIGTIVTRETSMAMAISSSSSRSIPKPIQSSREYSQSMPSRKFQQSAPINVPKAMRKQRINDEICAAAEEEEDEEMLPPHEIVARGVGVMPNTTFSMLEGVGRTLKGRDLRQVRNAVWHRTGFVD

Homology

[Close]

BLAST of Carg25884 vs. NCBI nr
Match: XP_022943240.1 (uncharacterized protein LOC111448027 [Cucurbita moschata])

HSP 1 Score: 433.7 bits (1114), Expect = 4.6e-118
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MRKPTGTATSDWPPPRDELSVQIFTFPNFPSILHFTVDPPRFLFANTQMDSSXXXXXXXX 60
           MRKPTGTATSDWPPPRDELSVQIFTFPNFPSILHFTVDPPRFLFANTQMDSSXXXXXXXX
Sbjct: 1   MRKPTGTATSDWPPPRDELSVQIFTFPNFPSILHFTVDPPRFLFANTQMDSSXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXLSPSAVASSDEFNESEVFWTSDFAQSNNRPFRTRKI 120
           XXXXXXXXXXXXXXXXXXXXXXXXLSPSAVASSDEFNESEVFWTSDFAQSNNRPFRTRKI
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXLSPSAVASSDEFNESEVFWTSDFAQSNNRPFRTRKI 120

Query: 121 STEDRTSSFDLPNSGILAALSDDADFNSKQRIGTIVTRETSMAMAISSSSSRSIPKPIQS 180
           STEDRTSSFDLPNSGILAALSDDADFNSKQRIGTIVTRETSMAMAISSSSSRSIPKPIQS
Sbjct: 121 STEDRTSSFDLPNSGILAALSDDADFNSKQRIGTIVTRETSMAMAISSSSSRSIPKPIQS 180

Query: 181 SREYSQSMPSRKFQQSAPINVPKAMRKQRINDEICXXXXXXXXXXXXXXHEIVARGVGVM 240
           SREYSQSMPSRKFQQSAPINVPKAMRKQRINDEICXXXXXXXXXXXXXXHEIVARGVGVM
Sbjct: 181 SREYSQSMPSRKFQQSAPINVPKAMRKQRINDEICXXXXXXXXXXXXXXHEIVARGVGVM 240

Query: 241 PNTTFSMLEGVGRTLKGRDLRQVRNAVWHRTGFVD 276
           PNTTFSMLEGVGRTLKGRDLRQVRNAVWHRTGFVD
Sbjct: 241 PNTTFSMLEGVGRTLKGRDLRQVRNAVWHRTGFVD 275

[Close]

BLAST of Carg25884 vs. NCBI nr
Match: XP_023005734.1 (uncharacterized protein LOC111498642 [Cucurbita maxima])

HSP 1 Score: 303.1 bits (775), Expect = 9.4e-79
Identity = 178/191 (93.19%), Postives = 180/191 (94.24%), Query Frame = 0


Query: 85  LSPSAVASSDEFNESEVFWTSDFAQSNNRPFRTRKISTEDRTSSFDLPNSGILAALSDDA 144
           LSPS VASSDEFNESEVFWTSDFAQSNNRPFRTRKISTEDRTSSFD PNSGILAALSDDA
Sbjct: 33  LSPSVVASSDEFNESEVFWTSDFAQSNNRPFRTRKISTEDRTSSFDPPNSGILAALSDDA 92

Query: 145 DFNSKQRIGTIVTRETSMAMAISSSSSRSIPKPIQSSREYSQSMPSRKFQQSAPINVPKA 204
           DFNSKQRIGTIVTRET+MAMAISSSSSR IPKPIQSS+EYSQSMPSRKFQQSAPINVPKA
Sbjct: 93  DFNSKQRIGTIVTRETTMAMAISSSSSRWIPKPIQSSKEYSQSMPSRKFQQSAPINVPKA 152

Query: 205 MRKQRINDEICXXXXXXXXXXXXXXHEIVARGVGVMPNTTFSMLEGVGRTLKGRDLRQVR 264
           MRK        XXXXXXXXXXXXXXHEIVARGVGVMPNTTFSMLEGVGRTLKGRDLRQVR
Sbjct: 153 MRK-XXXXXXXXXXXXXXXXXXXXXHEIVARGVGVMPNTTFSMLEGVGRTLKGRDLRQVR 212

Query: 265 NAVWHRTGFVD 276
           NAVWHRTGFVD
Sbjct: 213 NAVWHRTGFVD 222

[Close]

BLAST of Carg25884 vs. NCBI nr
Match: XP_023539527.1 (uncharacterized protein LOC111800167 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.4 bits (773), Expect = 1.6e-78
Identity = 178/191 (93.19%), Postives = 181/191 (94.76%), Query Frame = 0


Query: 85  LSPSAVASSDEFNESEVFWTSDFAQSNNRPFRTRKISTEDRTSSFDLPNSGILAALSDDA 144
           LSPSAVASSDEFNESEVFWTSDFAQSNNRPFRTRKISTEDRTSSFDL NSGILAALSD+A
Sbjct: 33  LSPSAVASSDEFNESEVFWTSDFAQSNNRPFRTRKISTEDRTSSFDLSNSGILAALSDNA 92

Query: 145 DFNSKQRIGTIVTRETSMAMAISSSSSRSIPKPIQSSREYSQSMPSRKFQQSAPINVPKA 204
           DFNS+QRIGTIVTRETSMAMAISSSSSRSIPKPIQSSREYSQSMPSRKFQQSAPINVPK+
Sbjct: 93  DFNSEQRIGTIVTRETSMAMAISSSSSRSIPKPIQSSREYSQSMPSRKFQQSAPINVPKS 152

Query: 205 MRKQRINDEICXXXXXXXXXXXXXXHEIVARGVGVMPNTTFSMLEGVGRTLKGRDLRQVR 264
           M K        XXXXXXXXXXXXXXHEIVARGVGVMPNTTFSMLEGVGRTLKGRDLRQVR
Sbjct: 153 M-KXXXXXXXXXXXXXXXXXXXXXXHEIVARGVGVMPNTTFSMLEGVGRTLKGRDLRQVR 212

Query: 265 NAVWHRTGFVD 276
           NAVWHRTGFVD
Sbjct: 213 NAVWHRTGFVD 222

[Close]

BLAST of Carg25884 vs. NCBI nr
Match: XP_011652020.1 (PREDICTED: uncharacterized protein LOC105434977 [Cucumis sativus] >KGN59155.1 hypothetical protein Csa_3G777630 [Cucumis sativus])

HSP 1 Score: 219.9 bits (559), Expect = 1.0e-53
Identity = 136/194 (70.10%), Postives = 160/194 (82.47%), Query Frame = 0


Query: 86  SPSAVASSDEFNESEVFWTSDFAQSNNRPFRTRKISTEDRTSSF-DLPNSGILAALSDDA 145
           +P A++ SDEFNESE+FWT+DF QS+N   R+RKIST+DR SSF   PNSGILAALSDD 
Sbjct: 31  TPPALSPSDEFNESELFWTADFVQSSNNSSRSRKISTDDRASSFIPPPNSGILAALSDDF 90

Query: 146 DFNSKQRIGTIVTRETSMAMAISSSSSRSIPKPIQSSREYSQSMPSRKFQQSAPINVPKA 205
           +++ K+RIGTI+TR+T+      SSS+RSIP+P+QS+REYSQS+P RKFQQSAPI VP+A
Sbjct: 91  NYDRKKRIGTILTRDTTSITKSPSSSTRSIPRPVQSNREYSQSVPCRKFQQSAPIKVPEA 150

Query: 206 MRKQRINDE---ICXXXXXXXXXXXXXXHEIVARGVGVMPNTTFSMLEGVGRTLKGRDLR 265
           MRK R ND      XXXXXXXXXXXXXX  IV RG G+ PNTTFS+LEG GRTLKGRDLR
Sbjct: 151 MRKGR-NDRDHVEXXXXXXXXXXXXXXXXXIVRRGSGMSPNTTFSVLEGAGRTLKGRDLR 210

Query: 266 QVRNAVWHRTGFVD 276
           +VRNAVWHRTGFVD
Sbjct: 211 RVRNAVWHRTGFVD 223

[Close]

BLAST of Carg25884 vs. NCBI nr
Match: XP_022144701.1 (uncharacterized protein LOC111014325 [Momordica charantia])

HSP 1 Score: 201.8 bits (512), Expect = 2.9e-48
Identity = 121/183 (66.12%), Postives = 139/183 (75.96%), Query Frame = 0


Query: 96  FNESEVFWTSDFAQSNNRPFRTRKISTEDRTSSFDLPNSGILAALSDDADFNSKQR--IG 155
           FNESEVFWT DFA SNNR FR+R IS +D  SS    NSG+LAAL+DD D + KQR  IG
Sbjct: 48  FNESEVFWTGDFALSNNRQFRSR-ISRDDGGSSSG--NSGVLAALTDDFDGDRKQRVGIG 107

Query: 156 TIVTRETSMAMAISSSSSRSIPKPIQSSREYSQSMP-SRKFQQSAPINVPKAMRKQRIND 215
           T++TR  S++ AIS SSSRSIP+P+Q+ REYSQS+P SRKFQQSAPINVP AMRKQR  D
Sbjct: 108 TVLTRGNSISAAISPSSSRSIPRPLQNVREYSQSVPSSRKFQQSAPINVP-AMRKQRNGD 167

Query: 216 EICXXXXXXXXXXXXXXHEIVARGVGVMPNTTFSMLEGVGRTLKGRDLRQVRNAVWHRTG 275
            +               HEIVARG GV P TTFS+LEGVGRTLKGRDLR+VRNAVWH+TG
Sbjct: 168 IVA------EEEEMLPPHEIVARGSGVSPKTTFSVLEGVGRTLKGRDLRRVRNAVWHKTG 220

[Close]

BLAST of Carg25884 vs. TAIR10
Match: AT3G15040.1 (Protein of unknown function, DUF584)

HSP 1 Score: 68.9 bits (167), Expect = 5.4e-12
Identity = 61/109 (55.96%), Postives = 73/109 (66.97%), Query Frame = 0


Query: 175 PKPIQSSREYSQS-MPSRKFQQSAPINVP---KAM----RKQRINDEICXXXXXXXXXXX 234
           PKP Q    +S S +   K+ QSAP+ VP    AM    +K+    +  XXXXXXXXXXX
Sbjct: 135 PKPPQERLPFSASFVGGGKYPQSAPVQVPLVSSAMMNRHKKEFKLTDXXXXXXXXXXXXX 194

Query: 235 XXXHEIVARGVGVMPNTTFSMLEGVGRTLKGRDLRQVRNAVWHRTGFVD 276
           XXXHEIVAR +      + S+LEG GRTLKGRDLRQVRNAV+ RTGF+D
Sbjct: 195 XXXHEIVARSLAQSSLLSCSVLEGAGRTLKGRDLRQVRNAVFRRTGFID 243

[Close]

BLAST of Carg25884 vs. TAIR10
Match: AT4G21970.1 (Protein of unknown function, DUF584)

HSP 1 Score: 59.7 bits (143), Expect = 3.3e-09
Identity = 44/126 (34.92%), Postives = 64/126 (50.79%), Query Frame = 0


Query: 156 VTRETSMAMAISSSSSRSIPKPIQSSREYSQSMPSRKFQQSAPINVPK------AMRKQR 215
           +++  ++  A SSSS+R IPK  + S    QS        SAP+N+P         +K  
Sbjct: 28  MSKSNNLFSASSSSSARYIPKGNEVSGGAKQS--------SAPMNIPDWSKVYGYSKKNT 87

Query: 216 INDEICXXXXXXXXXXXXXXHEIVARGVGVMPNTTFSMLEGVGRTLKGRDLRQVRNAVWH 275
            +                  HE+VA+ +     ++FSM EG+GRTLKGRDL + RNAV  
Sbjct: 88  SSHLHSWAIDDDDEGSMVPPHELVAKRLARTQISSFSMCEGIGRTLKGRDLSKTRNAVLT 145

[Close]

BLAST of Carg25884 vs. TAIR10
Match: AT4G04630.1 (Protein of unknown function, DUF584)

HSP 1 Score: 53.9 bits (128), Expect = 1.8e-07
Identity = 54/128 (42.19%), Postives = 65/128 (50.78%), Query Frame = 0


Query: 167 SSSSSRSIPKPIQSSREYSQSMP---------SRKFQQSAPINVP----------KAMRK 226
           +SS    IPK   SS       P         S   Q SAP+NVP             R 
Sbjct: 41  TSSPEMKIPKSHFSSXXXXXXXPWNIRRSKEVSGVKQSSAPMNVPDWSKVYGDSKSNRRS 100

Query: 227 QRINDEICXXXXXXXXXXXXXXHEIVARGVGVMPNTTFSMLEGVGRTLKGRDLRQVRNAV 276
             ++    XXXXXXXXX     HE VAR +     ++FSM EGVGRTLKGRDL +VRNAV
Sbjct: 101 SHLHXXXXXXXXXXXXXCMVPPHEWVARKLARTQISSFSMCEGVGRTLKGRDLSKVRNAV 160

[Close]

BLAST of Carg25884 vs. TAIR10
Match: AT5G60680.1 (Protein of unknown function, DUF584)

HSP 1 Score: 48.1 bits (113), Expect = 9.9e-06
Identity = 21/32 (65.62%), Postives = 27/32 (84.38%), Query Frame = 0


Query: 244 TFSMLEGVGRTLKGRDLRQVRNAVWHRTGFVD 276
           +FS+ EGVGRTLKGRDL +VRNA++ + GF D
Sbjct: 132 SFSVHEGVGRTLKGRDLSRVRNAIFEKFGFQD 163

[Close]

BLAST of Carg25884 vs. TAIR10
Match: AT1G61930.1 (Protein of unknown function, DUF584)

HSP 1 Score: 47.8 bits (112), Expect = 1.3e-05
Identity = 19/28 (67.86%), Postives = 26/28 (92.86%), Query Frame = 0


Query: 246 SMLEGVGRTLKGRDLRQVRNAVWHRTGF 274
           S+ +GVGRTLKGR+LR+VR+A+W +TGF
Sbjct: 174 SVFDGVGRTLKGRELRRVRDAIWSQTGF 201

[Close]

BLAST of Carg25884 vs. TrEMBL
Match: tr|A0A0A0LAY5|A0A0A0LAY5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G777630 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 6.9e-54
Identity = 136/194 (70.10%), Postives = 160/194 (82.47%), Query Frame = 0


Query: 86  SPSAVASSDEFNESEVFWTSDFAQSNNRPFRTRKISTEDRTSSF-DLPNSGILAALSDDA 145
           +P A++ SDEFNESE+FWT+DF QS+N   R+RKIST+DR SSF   PNSGILAALSDD 
Sbjct: 31  TPPALSPSDEFNESELFWTADFVQSSNNSSRSRKISTDDRASSFIPPPNSGILAALSDDF 90

Query: 146 DFNSKQRIGTIVTRETSMAMAISSSSSRSIPKPIQSSREYSQSMPSRKFQQSAPINVPKA 205
           +++ K+RIGTI+TR+T+      SSS+RSIP+P+QS+REYSQS+P RKFQQSAPI VP+A
Sbjct: 91  NYDRKKRIGTILTRDTTSITKSPSSSTRSIPRPVQSNREYSQSVPCRKFQQSAPIKVPEA 150

Query: 206 MRKQRINDE---ICXXXXXXXXXXXXXXHEIVARGVGVMPNTTFSMLEGVGRTLKGRDLR 265
           MRK R ND      XXXXXXXXXXXXXX  IV RG G+ PNTTFS+LEG GRTLKGRDLR
Sbjct: 151 MRKGR-NDRDHVEXXXXXXXXXXXXXXXXXIVRRGSGMSPNTTFSVLEGAGRTLKGRDLR 210

Query: 266 QVRNAVWHRTGFVD 276
           +VRNAVWHRTGFVD
Sbjct: 211 RVRNAVWHRTGFVD 223

[Close]

BLAST of Carg25884 vs. TrEMBL
Match: tr|A0A1S3B6S2|A0A1S3B6S2_CUCME (uncharacterized protein LOC103486633 OS=Cucumis melo OX=3656 GN=LOC103486633 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 7.4e-32
Identity = 93/125 (74.40%), Postives = 106/125 (84.80%), Query Frame = 0


Query: 151 RIGTIVTRETSMAMAISSSSSRSIPKPIQSSREYSQSMPSRKFQQSAPINVPKAMRKQRI 210
           RIGTI+TR+TS+  +  SSS RSIP+P+QS+R+YSQS+P RKFQQSAPI VP+AMRK R 
Sbjct: 99  RIGTILTRDTSITKS-PSSSMRSIPRPVQSNRDYSQSVPCRKFQQSAPIKVPEAMRKDRN 158

Query: 211 NDEICXXXXXXXXXXXXXXHEIVARGVGVMPNTTFSMLEGVGRTLKGRDLRQVRNAVWHR 270
           N E    XXXXXXXXXXXX EIV RG G+ PNTTFS+LEG GRTLKGRDLR+VRNAVWHR
Sbjct: 159 NGE-HVEXXXXXXXXXXXXXEIVRRGSGMSPNTTFSVLEGAGRTLKGRDLRRVRNAVWHR 218

Query: 271 TGFVD 276
           TGFVD
Sbjct: 219 TGFVD 221

[Close]

BLAST of Carg25884 vs. TrEMBL
Match: tr|A0A200QHX8|A0A200QHX8_9MAGN (Senescence regulator S40 OS=Macleaya cordata OX=56857 GN=BVC80_1751g204 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 2.0e-29
Identity = 99/201 (49.25%), Postives = 120/201 (59.70%), Query Frame = 0


Query: 92  SSDEFNESEVFWTSDFAQSNN--RPFRT---RKISTEDRTSSFDLP-NSGILAALSDDAD 151
           + DE +E EVFWT DF+QSNN   P +T   R     ++  SF  P N GILAAL +D  
Sbjct: 44  ADDELDEDEVFWTGDFSQSNNLSDPPKTPSKRNNHNNNQPISFRRPENFGILAALPED-- 103

Query: 152 FNSKQRIGT--IVTRETSMAMAISSSSSR---SIPKP-IQSSREYSQSMPSRKFQQSAPI 211
            + K+ +G    + R+ S+   +SSSSSR   SIPKP     REY  S+PS K  QSAP+
Sbjct: 104 -DKKETLGDRHFLYRKASIPSPLSSSSSRMIPSIPKPQSPREREYFLSLPSGKLHQSAPV 163

Query: 212 NVP-----KAMRKQRINDEICXXXXXXXXXXXXXXHEIVARGVGVMPNTTFSMLEGVGRT 271
           NVP       MRK  + +E                HEIVARG G  P TTFS+LEGVGRT
Sbjct: 164 NVPVLSKAAKMRKPTVFEE----DDEDGDDEMLPPHEIVARGYGQSPRTTFSVLEGVGRT 223

Query: 272 LKGRDLRQVRNAVWHRTGFVD 276
           LKGRDLRQVRNAVW +TGF+D
Sbjct: 224 LKGRDLRQVRNAVWRQTGFLD 237

[Close]

BLAST of Carg25884 vs. TrEMBL
Match: tr|A0A2R6R7Q7|A0A2R6R7Q7_ACTCH (MORC family CW-type zinc finger protein like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc08415 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 4.5e-29
Identity = 90/193 (46.63%), Postives = 114/193 (59.07%), Query Frame = 0


Query: 88  SAVASSDEFNESEVFWTSDFAQSNNRPFRTRKIST--EDRTSSFDLP-NSGILAALSDDA 147
           +A  + DE NE EVFWT DF++ N R      +S   +    SF  P  SGILAAL++  
Sbjct: 36  TASFTGDELNEDEVFWTGDFSEPNRRSTLPSSVSARGDQNHYSFRQPEESGILAALAE-- 95

Query: 148 DFNSKQRIGTIVTRETSMAMAISSSSSRSIPKPIQSSRE--YSQSMPSRKFQQSAPINVP 207
             N K+    +V R+ + A+  SS    +IPKP    RE  YS S+P+ KF QSAP+NVP
Sbjct: 96  --NPKR---PVVYRKPTTAVTSSSRLLPAIPKPPPQDRERDYSPSVPAWKFHQSAPMNVP 155

Query: 208 KAMRKQRINDEICXXXXXXXXXXXXXXHEIVARGVGVMPNTTFSMLEGVGRTLKGRDLRQ 267
              RK R  +                 HEIVARG  ++P TTFS+LEGVGRTLKGRDLRQ
Sbjct: 156 VVPRKVRNGELAALDDGDEDDDEMLPPHEIVARGSAILPKTTFSVLEGVGRTLKGRDLRQ 215

Query: 268 VRNAVWHRTGFVD 276
           VRNAV+ +TGF+D
Sbjct: 216 VRNAVFRKTGFID 221

[Close]

BLAST of Carg25884 vs. TrEMBL
Match: tr|A0A2R6PXP5|A0A2R6PXP5_ACTCH (Protein split ends like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc16947 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 6.5e-28
Identity = 87/190 (45.79%), Postives = 113/190 (59.47%), Query Frame = 0


Query: 88  SAVASSDEFNESEVFWTSDFAQSNNRPFRTRKISTEDRT---SSFDLP-NSGILAALSDD 147
           +A  + DE NE EVFWT +F++  +R      +S  D+     SF  P  SGILAAL+++
Sbjct: 35  AASFTGDELNEDEVFWTGNFSEPKSRSTSPSSVSVGDQNHSRHSFRHPEKSGILAALAEN 94

Query: 148 ADFNSKQRIGTIVTRETSMAMAISSSSSRSIPK--PIQSSREYSQSMPSRKFQQSAPINV 207
            +         +V R+ + A+  SS    +IPK  P +  RE+SQS+PSRKF QSAPI+V
Sbjct: 95  PN-------RPVVYRKPTTAVTSSSRLFPAIPKPPPQEREREHSQSVPSRKFHQSAPISV 154

Query: 208 PKAMRKQRINDEICXXXXXXXXXXXXXXHEIVARGVGVMPNTTFSMLEGVGRTLKGRDLR 267
           P   RK R  +                 HEIVARG  ++P TTFS+LEGVGRTLKGRDLR
Sbjct: 155 PVVPRKVRNGELADVDDGDDDGDEMLPPHEIVARGSAILPKTTFSVLEGVGRTLKGRDLR 214

Query: 268 QVRNAVWHRT 272
           QVRNAVW +T
Sbjct: 215 QVRNAVWRKT 217

The following BLAST results are available for this feature:

BLAST of Carg25884 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943240.1	4.6e-118	100.00	uncharacterized protein LOC111448027 [Cucurbita moschata]	[more]
XP_023005734.1	9.4e-79	93.19	uncharacterized protein LOC111498642 [Cucurbita maxima]	[more]
XP_023539527.1	1.6e-78	93.19	uncharacterized protein LOC111800167 [Cucurbita pepo subsp. pepo]	[more]
XP_011652020.1	1.0e-53	70.10	PREDICTED: uncharacterized protein LOC105434977 [Cucumis sativus] >KGN59155.1 hy...	[more]
XP_022144701.1	2.9e-48	66.12	uncharacterized protein LOC111014325 [Momordica charantia]	[more]

BLAST of Carg25884 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15040.1	5.4e-12	55.96	Protein of unknown function, DUF584	[more]
AT4G21970.1	3.3e-09	34.92	Protein of unknown function, DUF584	[more]
AT4G04630.1	1.8e-07	42.19	Protein of unknown function, DUF584	[more]
AT5G60680.1	9.9e-06	65.63	Protein of unknown function, DUF584	[more]
AT1G61930.1	1.3e-05	67.86	Protein of unknown function, DUF584	[more]

BLAST of Carg25884 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg25884 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LAY5\|A0A0A0LAY5_CUCSA	6.9e-54	70.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G777630 PE=4 SV=1	[more]
tr\|A0A1S3B6S2\|A0A1S3B6S2_CUCME	7.4e-32	74.40	uncharacterized protein LOC103486633 OS=Cucumis melo OX=3656 GN=LOC103486633 PE=...	[more]
tr\|A0A200QHX8\|A0A200QHX8_9MAGN	2.0e-29	49.25	Senescence regulator S40 OS=Macleaya cordata OX=56857 GN=BVC80_1751g204 PE=4 SV=...	[more]
tr\|A0A2R6R7Q7\|A0A2R6R7Q7_ACTCH	4.5e-29	46.63	MORC family CW-type zinc finger protein like OS=Actinidia chinensis var. chinens...	[more]
tr\|A0A2R6PXP5\|A0A2R6PXP5_ACTCH	6.5e-28	45.79	Protein split ends like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY0...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007608	Senescence_reg_S40

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25884-RA	Carg25884-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 95..275 e-value: 5.8E-41 score: 141.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..195
None	No IPR available	PANTHER	PTHR33083:SF42	SUBFAMILY NOT NAMED	coord: 66..275
None	No IPR available	PANTHER	PTHR33083	FAMILY NOT NAMED	coord: 66..275

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25884	Cla017672	Watermelon (97103) v1	carwmB0608
Carg25884	Csa3G777630	Cucumber (Chinese Long) v2	carcuB0637
Carg25884	MELO3C009492	Melon (DHL92) v3.5.1	carmeB0613
Carg25884	ClCG10G018740	Watermelon (Charleston Gray)	carwcgB0593
Carg25884	CSPI03G35130	Wild cucumber (PI 183967)	carcpiB0643
Carg25884	Cucsa.241360	Cucumber (Gy14) v1	carcgyB0686
Carg25884	CmaCh06G004910	Cucurbita maxima (Rimu)	carcmaB0858
Carg25884	CmoCh06G004920	Cucurbita moschata (Rifu)	carcmoB0835
Carg25884	Lsi03G018730	Bottle gourd (USVL1VR-Ls)	carlsiB557
Carg25884	Cp4.1LG08g10040	Cucurbita pepo (Zucchini)	carcpeB0869
Carg25884	CsGy3G032630	Cucumber (Gy14) v2	carcgybB0609
Carg25884	MELO3C009492.2	Melon (DHL92) v3.6.1	carmedB0619
Carg25884	CsaV3_3G037490	Cucumber (Chinese Long) v3	carcucB0644
Carg25884	Cla97C10G201780	Watermelon (97103) v2	carwmbB0636
Carg25884	Bhi11G001943	Wax gourd	carwgoB0725

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg25884	Silver-seed gourd	carcarB290
Carg25884	Cucurbita maxima (Rimu)	carcmaB0856
Carg25884	Cucurbita moschata (Rifu)	carcmoB0833
Carg25884	Cucurbita pepo (Zucchini)	carcpeB0868