CsaV3_3G036200 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G036200
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionzinc finger protein ZAT5-like
Locationchr3 : 30161576 .. 30163036 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGGCTTGCAAACTAATCCTACAGAAAGGAATCGTGGGGAAAAAGTAATGGGTGGGGTTTGCTTCAAAGCCAACCGAATCTCACTCGTTTTCTAGCCTCCTCTTACTTACATTGCATCTTCTTCCCTTATTCTTCTTTCTATATATAACTTCCAATCTTGGGTTTAGCTTTTGCATAATCTCAATTTATTCTACTTTTTTCAAGAACAAATGGCTGAAACCCCCGATGAAAATCAAGCTCAAATCATCAAGGGCAAACGAACCAAACGTTTAAGACCATCCTCTGTTTCTTCCACTTCTTCAAGTGCTGATTGTTCAAGCTCTTCAGCTGGATTGACTGAAGAGGAAGAAGAAGATCAAGATTTGGCTAATTGTTTGATTCTTTTGGCTCAAGGTAGAAGTAGAATTACAGAGGGCTGTTCCTCTGTTTTTGTTCAACAAAAATTGGTTGCTGCTAATGAATCTCTGTTTCTTTACCAATGTAAAACTTGCGATCGCTGTTTCCCTTCTTTTCAAGCTTTGGGTGGTCATAGAGCTAGCCATAAAAAGCCCAAATTCTTCAACAACATTACTGCTAATTCTGTTGAACAACAACATCAGCAGCAGCAGCAGCAGCACCACCACCACCACCACCAAGACAACAATTTTACAACCTCCAATTCAATTCAACTCTCTTTGCAATTGTCCACCGCCTCCCGTCCTCCGCCGCCTCCCACCGCCGGTGACCTCATCAAATCAAAGGTTCATGAGTGTTCCATCTGTGGAGCGGAATTCTCCTCCGGCCAAGCTCTCGGCGGCCATATGAGAAGGCACAGAGCATTGACAGCTACCACGACTAGACCTATTACCACGACCCCACAATTCATAAAGAAAGAGAGGAATATGTTGGAGTTGGATCTTAATCTTCCGGCGCCAGAAGATGACCGGCACCGTCCACCGGTAGCTGTCTTCTCCACCGCATCGCCGCTTGTGGATTGCCATTACTGATTTTTTTCTAATTTTTTTTTTTAAAAAAACTATTAATTGTTACAAAGGTCGCATCATTTGCACCAAATTAGAACTCCCCAATTGGAATTTAAAGTTACTTCCTTTGTGGGGTTTCGATTTCATTATTATTCATTTTATAACCACCCAACAAAACCATTCGATTTTTATTGTCTCTCTACTAATTTGACTCACTTCAGTTCATCAATTCAATTAATTAATTCAACTTGAAAGTTACCAAAACAACTTCTCTTCTTCAATTATTTTTCTAGAATAACACTGTCACATCTATGCCCTATATGTTGTTAATTCTTGATGCTACAAAGTCTTGTTTGTGTGTGGTAAAAGGAAAAACAAGAATGTGGGTTTGTTGTGGTTAGTATATGTTGGTTATGACTTTGGGATCATCAAACAAATTTATGTGTATAAAGATGCATGTGAGGAGTATGGATAAAGGGAATTAAAAGTGATGAATGAG

mRNA sequence

ATGGCTGAAACCCCCGATGAAAATCAAGCTCAAATCATCAAGGGCAAACGAACCAAACGTTTAAGACCATCCTCTGTTTCTTCCACTTCTTCAAGTGCTGATTGTTCAAGCTCTTCAGCTGGATTGACTGAAGAGGAAGAAGAAGATCAAGATTTGGCTAATTGTTTGATTCTTTTGGCTCAAGGTAGAAGTAGAATTACAGAGGGCTGTTCCTCTGTTTTTGTTCAACAAAAATTGGTTGCTGCTAATGAATCTCTGTTTCTTTACCAATGTAAAACTTGCGATCGCTGTTTCCCTTCTTTTCAAGCTTTGGGTGGTCATAGAGCTAGCCATAAAAAGCCCAAATTCTTCAACAACATTACTGCTAATTCTGTTGAACAACAACATCAGCAGCAGCAGCAGCAGCACCACCACCACCACCACCAAGACAACAATTTTACAACCTCCAATTCAATTCAACTCTCTTTGCAATTGTCCACCGCCTCCCGTCCTCCGCCGCCTCCCACCGCCGGTGACCTCATCAAATCAAAGGTTCATGAGTGTTCCATCTGTGGAGCGGAATTCTCCTCCGGCCAAGCTCTCGGCGGCCATATGAGAAGGCACAGAGCATTGACAGCTACCACGACTAGACCTATTACCACGACCCCACAATTCATAAAGAAAGAGAGGAATATGTTGGAGTTGGATCTTAATCTTCCGGCGCCAGAAGATGACCGGCACCGTCCACCGGTAGCTGTCTTCTCCACCGCATCGCCGCTTGTGGATTGCCATTACTGA

Coding sequence (CDS)

ATGGCTGAAACCCCCGATGAAAATCAAGCTCAAATCATCAAGGGCAAACGAACCAAACGTTTAAGACCATCCTCTGTTTCTTCCACTTCTTCAAGTGCTGATTGTTCAAGCTCTTCAGCTGGATTGACTGAAGAGGAAGAAGAAGATCAAGATTTGGCTAATTGTTTGATTCTTTTGGCTCAAGGTAGAAGTAGAATTACAGAGGGCTGTTCCTCTGTTTTTGTTCAACAAAAATTGGTTGCTGCTAATGAATCTCTGTTTCTTTACCAATGTAAAACTTGCGATCGCTGTTTCCCTTCTTTTCAAGCTTTGGGTGGTCATAGAGCTAGCCATAAAAAGCCCAAATTCTTCAACAACATTACTGCTAATTCTGTTGAACAACAACATCAGCAGCAGCAGCAGCAGCACCACCACCACCACCACCAAGACAACAATTTTACAACCTCCAATTCAATTCAACTCTCTTTGCAATTGTCCACCGCCTCCCGTCCTCCGCCGCCTCCCACCGCCGGTGACCTCATCAAATCAAAGGTTCATGAGTGTTCCATCTGTGGAGCGGAATTCTCCTCCGGCCAAGCTCTCGGCGGCCATATGAGAAGGCACAGAGCATTGACAGCTACCACGACTAGACCTATTACCACGACCCCACAATTCATAAAGAAAGAGAGGAATATGTTGGAGTTGGATCTTAATCTTCCGGCGCCAGAAGATGACCGGCACCGTCCACCGGTAGCTGTCTTCTCCACCGCATCGCCGCTTGTGGATTGCCATTACTGA

Protein sequence

MAETPDENQAQIIKGKRTKRLRPSSVSSTSSSADCSSSSAGLTEEEEEDQDLANCLILLAQGRSRITEGCSSVFVQQKLVAANESLFLYQCKTCDRCFPSFQALGGHRASHKKPKFFNNITANSVEQQHQQQQQQHHHHHHQDNNFTTSNSIQLSLQLSTASRPPPPPTAGDLIKSKVHECSICGAEFSSGQALGGHMRRHRALTATTTRPITTTPQFIKKERNMLELDLNLPAPEDDRHRPPVAVFSTASPLVDCHY
Homology
[Close]
BLAST of CsaV3_3G036200 vs. NCBI nr
Match: XP_011652845.1 (PREDICTED: zinc finger protein ZAT5-like [Cucumis sativus] >KGN59004.1 hypothetical protein Csa_3G743410 [Cucumis sativus])

HSP 1 Score: 338.6 bits (867), Expect = 1.9e-89
Identity = 257/258 (99.61%), Postives = 257/258 (99.61%), Query Frame = 0 

Query: 1   MAETPDENQAQIIKGKRTKRLRPSSXXXXXXXXXXXXXXXXXXXXXXXXXXLANCLILLA 60
           MAETPDENQAQIIKGKRTKRLRPSSXXXXXXXXXXXXXXXXXXXXXXXXXXLANCLILLA
Sbjct: 1   MAETPDENQAQIIKGKRTKRLRPSSXXXXXXXXXXXXXXXXXXXXXXXXXXLANCLILLA 60

Query: 61  QGRSRITEGCSSVFVQQKLVAANESLFLYQCKTCDRCFPSFQALGGHRASHKKPKFFNXX 120
           QGRSRITEGCSSVFVQQKLVAANESLFLYQCKTCDRCFPSFQALGGHRASHKKPKFFN X
Sbjct: 61  QGRSRITEGCSSVFVQQKLVAANESLFLYQCKTCDRCFPSFQALGGHRASHKKPKFFN-X 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDLIKSKVHE 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDLIKSKVHE
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDLIKSKVHE 180

Query: 181 CSICGAEFSSGQALGGHMRRHRALTATTTRPITTTPQFIKKERNMLELDLNLPAPEDDRH 240
           CSICGAEFSSGQALGGHMRRHRALTATTTRPITTTPQFIKKERNMLELDLNLPAPEDDRH
Sbjct: 181 CSICGAEFSSGQALGGHMRRHRALTATTTRPITTTPQFIKKERNMLELDLNLPAPEDDRH 240

Query: 241 RPPVAVFSTASPLVDCHY 259
           RPPVAVFSTASPLVDCHY
Sbjct: 241 RPPVAVFSTASPLVDCHY 257

[Close]
BLAST of CsaV3_3G036200 vs. NCBI nr
Match: XP_008442730.1 (PREDICTED: zinc finger protein ZAT5-like [Cucumis melo])

HSP 1 Score: 325.9 bits (834), Expect = 1.3e-85
Identity = 246/259 (94.98%), Postives = 247/259 (95.37%), Query Frame = 0 

Query: 1   MAETPDENQAQIIKGKRTKRLRPSSXXXXXXXXXXXXXXXXXXXXXXXXXXLANCLILLA 60
           MAETPDENQAQIIKGKRTKRLRPSSXXXXXXXXXXXXXXXXXXXXXXXXXXLANCLILLA
Sbjct: 1   MAETPDENQAQIIKGKRTKRLRPSSXXXXXXXXXXXXXXXXXXXXXXXXXXLANCLILLA 60

Query: 61  QGRSRITEGCSSVFVQQKLVAANESLFLYQCKTCDRCFPSFQALGGHRASHKKPKFFNXX 120
           QGRSRITEGCSSVFV+QKLVAANESLFLYQCKTCDRCFPSFQALGGHRASHKKPKF    
Sbjct: 61  QGRSRITEGCSSVFVEQKLVAANESLFLYQCKTCDRCFPSFQALGGHRASHKKPKF---- 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDLIKSKVHE 180
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDLIKSKVHE
Sbjct: 121 ------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDLIKSKVHE 180

Query: 181 CSICGAEFSSGQALGGHMRRHRALTATTTRPITT-TPQFIKKERNMLELDLNLPAPEDDR 240
           CSICGAEFSSGQALGGHMRRHR LTATTTRPITT TPQFIKKERNMLELDLNLPAPEDDR
Sbjct: 181 CSICGAEFSSGQALGGHMRRHRTLTATTTRPITTSTPQFIKKERNMLELDLNLPAPEDDR 240

Query: 241 HRPPVAVFSTASPLVDCHY 259
           HRPPVAVFSTASPLVDCHY
Sbjct: 241 HRPPVAVFSTASPLVDCHY 249

[Close]
BLAST of CsaV3_3G036200 vs. NCBI nr
Match: XP_022934069.1 (zinc finger protein ZAT5-like [Cucurbita moschata])

HSP 1 Score: 246.5 bits (628), Expect = 9.8e-62
Identity = 188/269 (69.89%), Postives = 195/269 (72.49%), Query Frame = 0 

Query: 1   MAETPDENQAQIIKGKRTKRLRPSSXXXXXXXXXXXXXXXXXXXXXXXXXXLANCLILLA 60
           MAETPDENQAQI+KGKRT       XXXXXXXXXXXXXXXXXXXXXXXXX LANCL+LLA
Sbjct: 1   MAETPDENQAQIMKGKRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLANCLMLLA 60

Query: 61  QGRSRITEGCSS-----VFVQQKLVAANESLFLYQCKTCDRCFPSFQALGGHRASHKKPK 120
           QGR+R T  CSS     V V+QKL AAN+SLFLYQCKTCDR FPSFQALGGHRASHKKPK
Sbjct: 61  QGRTR-TGACSSSSSSPVLVRQKL-AANQSLFLYQCKTCDRYFPSFQALGGHRASHKKPK 120

Query: 121 FFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDLIK 180
           F N                                      XXXXXXXXXXXXX  DLIK
Sbjct: 121 FNN--------------IVNTSVPQPHFTPSDSIQLSLQLSXXXXXXXXXXXXXXNDLIK 180

Query: 181 SKVHECSICGAEFSSGQALGGHMRRHRALTATTTR--PITTTPQ----FIKKERNMLELD 240
            KVHECSICGAEFSSGQALGGHMRRHRALTA  TR    TTTPQ      KK+RNMLELD
Sbjct: 181 PKVHECSICGAEFSSGQALGGHMRRHRALTANPTRGATTTTTPQLQDLMSKKKRNMLELD 240

Query: 241 LNLPAPEDDRHRPPVAVFSTASPLVDCHY 259
           LNLPAPE+DRHRPPVAVFS ASPLVDCHY
Sbjct: 241 LNLPAPEEDRHRPPVAVFSGASPLVDCHY 253

[Close]
BLAST of CsaV3_3G036200 vs. NCBI nr
Match: XP_023005952.1 (zinc finger protein ZAT5-like [Cucurbita maxima])

HSP 1 Score: 243.0 bits (619), Expect = 1.1e-60
Identity = 171/265 (64.53%), Postives = 178/265 (67.17%), Query Frame = 0 

Query: 1   MAETPDENQAQIIKGKRTKRLRPSSXXXXXXXXXXXXXXXXXXXXXXXXXXLANCLILLA 60
           MAETPDENQAQ IKGKRTKR RP  XXXXXXXXXXXXXXXXXXXXXXXXX LANCLILLA
Sbjct: 1   MAETPDENQAQFIKGKRTKRTRP-XXXXXXXXXXXXXXXXXXXXXXXXXXDLANCLILLA 60

Query: 61  QGRSRITEGCSSVFVQQKLVAANESLFLYQCKTCDRCFPSFQALGGHRASHKKPKFFNXX 120
           QGR   T  C+SV VQ      N+SLF YQCKTCDRCFPSFQALGGHRASHKKPK  N  
Sbjct: 61  QGR---TGDCASVLVQH-----NQSLFAYQCKTCDRCFPSFQALGGHRASHKKPKISN-- 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDLIKSKVHE 180
                                                            AGD++KSKVHE
Sbjct: 121 ------------------------SLQTHDPQFHLSLQLSTGRPPASFAAGDVVKSKVHE 180

Query: 181 CSICGAEFSSGQALGGHMRRHRALTAT---TTRPITTTPQ----FIKKERNMLELDLNLP 240
           CSICGAEFSSGQALGGHMRRHRALT+T    +R  T TPQ     IKKERN+LELDLNLP
Sbjct: 181 CSICGAEFSSGQALGGHMRRHRALTSTASVASRGATATPQLQELMIKKERNVLELDLNLP 230

Query: 241 APEDDRHRPPVAVFSTASPLVDCHY 259
           APEDDRHR  VAVFS AS LVDCHY
Sbjct: 241 APEDDRHRTAVAVFSAASSLVDCHY 230

[Close]
BLAST of CsaV3_3G036200 vs. NCBI nr
Match: XP_022936966.1 (zinc finger protein ZAT5-like [Cucurbita moschata])

HSP 1 Score: 241.5 bits (615), Expect = 3.2e-60
Identity = 170/265 (64.15%), Postives = 177/265 (66.79%), Query Frame = 0 

Query: 1   MAETPDENQAQIIKGKRTKRLRPSSXXXXXXXXXXXXXXXXXXXXXXXXXXLANCLILLA 60
           MAETPDENQAQ IKGKRTKR RP  XXXXXXXXXXXXXXXXXXXXXXXXX LANCLILLA
Sbjct: 1   MAETPDENQAQFIKGKRTKRTRP-XXXXXXXXXXXXXXXXXXXXXXXXXXDLANCLILLA 60

Query: 61  QGRSRITEGCSSVFVQQKLVAANESLFLYQCKTCDRCFPSFQALGGHRASHKKPKFFNXX 120
           QGR   T  C+SV VQ      N+SLF YQCKTCDRCFPSFQALGGHRASHKKPK  N  
Sbjct: 61  QGR---TGDCASVLVQH-----NQSLFAYQCKTCDRCFPSFQALGGHRASHKKPKISN-- 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDLIKSKVHE 180
                                                            AGDL+KSKVHE
Sbjct: 121 ------------------------SLQTHDPQFHLSLQLSTGRPPASFAAGDLVKSKVHE 180

Query: 181 CSICGAEFSSGQALGGHMRRHRALTATTTRP---ITTTPQ----FIKKERNMLELDLNLP 240
           CSICGAEFSSGQALGGHMRRHRALT+T + P      TPQ     IKKERN+LELDLNLP
Sbjct: 181 CSICGAEFSSGQALGGHMRRHRALTSTASVPSRGAAATPQLQELMIKKERNVLELDLNLP 230

Query: 241 APEDDRHRPPVAVFSTASPLVDCHY 259
           APEDDRHR  V+VFS AS LVDCHY
Sbjct: 241 APEDDRHRTAVSVFSAASSLVDCHY 230

[Close]
BLAST of CsaV3_3G036200 vs. TAIR10
Match: AT2G28200.1 (C2H2-type zinc finger family protein)

HSP 1 Score: 132.1 bits (331), Expect = 4.9e-31
Identity = 85/228 (37.28%), Postives = 110/228 (48.25%), Query Frame = 0 

Query: 52  LANCLILLAQGRSRITEGC-SSVFVQQKLVAANESLFLYQCKTCDRCFPSFQALGGHRAS 111
           +A CLI+LA+G    +    +S  + QK+ + N S ++Y+CKTC+R F SFQALGGHRAS
Sbjct: 77  MAICLIMLARGTVLPSPDLKNSRKIHQKISSENSSFYVYECKTCNRTFSSFQALGGHRAS 136

Query: 112 HKKPKFFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 171
           HKKP+                                                      A
Sbjct: 137 HKKPR-----------------TSTEEKTRLPLTQPKSSASEEGQNSHFKVSGSALASQA 196

Query: 172 GDLIK--SKVHECSICGAEFSSGQALGGHMRRHRALTATTTRPITTTPQF---------- 231
            ++I   +KVHECSICG+EF+SGQALGGHMRRHR    TT  P+  T +           
Sbjct: 197 SNIINKANKVHECSICGSEFTSGQALGGHMRRHRT-AVTTISPVAATAEVSRNSTEEEIE 256

Query: 232 ------IKKERNMLELDLNLPAPEDDRHRPPV--AVFSTASPLVDCHY 259
                 ++++R  L LDLNLPAPEDD         VFS    L+DCHY
Sbjct: 257 INIGRSMEQQRKYLPLDLNLPAPEDDLRESKFQGIVFSATPALIDCHY 286

[Close]
BLAST of CsaV3_3G036200 vs. TAIR10
Match: AT5G03510.1 (C2H2-type zinc finger family protein)

HSP 1 Score: 122.5 bits (306), Expect = 3.9e-28
Identity = 90/236 (38.14%), Postives = 110/236 (46.61%), Query Frame = 0 

Query: 52  LANCLILLAQG-RSRITEGCSSV----FVQQKLVAANESLFL---YQCKTCDRCFPSFQA 111
           +ANCLILL+QG +++ ++   S+    F   K   A+  L L   YQCKTCD+ F SFQA
Sbjct: 73  MANCLILLSQGHQAKSSDDHLSMQRMGFFSNKKPVASLGLGLDGVYQCKTCDKSFHSFQA 132

Query: 112 LGGHRASHKKPKFFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 171
           LGGHRASHKKPK                                                
Sbjct: 133 LGGHRASHKKPKL----------------GASVFKCVEKKTASASTVETVEAGAVGSFLS 192

Query: 172 XXXXXXAGDLIKSKVHECSICGAEFSSGQALGGHMRRHRALT--ATTTRPITTT------ 231
                  G     K HECSIC AEFSSGQALGGHMRRHR LT  A  T  I T       
Sbjct: 193 LQVTSSDGSKKPEKTHECSICKAEFSSGQALGGHMRRHRGLTINANATSAIKTAIXXXXX 252

Query: 232 --PQFIKKERNMLELDLNLPAPEDDR----------HRPPVAVFSTAS-PLVDCHY 259
                  + +N L+LDLNLPAPED+R           +  + +F+ AS  L+DCH+
Sbjct: 253 XXXXXXIRPKNFLQLDLNLPAPEDERCCEKPKFAFASKDQILLFTAASNSLIDCHH 292

[Close]
BLAST of CsaV3_3G036200 vs. TAIR10
Match: AT5G04390.1 (C2H2-type zinc finger family protein)

HSP 1 Score: 94.4 bits (233), Expect = 1.1e-19
Identity = 52/116 (44.83%), Postives = 57/116 (49.14%), Query Frame = 0 

Query: 87  FLYQCKTCDRCFPSFQALGGHRASHKKPKFFNXXXXXXXXXXXXXXXXXXXXXXXXXXXX 146
           ++YQCKTCDR FPSFQALGGHRASHKKPK  +                            
Sbjct: 151 YVYQCKTCDRTFPSFQALGGHRASHKKPKAASFYSNLDLKKNTYANDAVSLVHTTTTVFK 210

Query: 147 XXXXXXXXXXXXXXXXXXXXXXXAGDLIKSKVHECSICGAEFSSGQALGGHMRRHR 203
                                   G   K+KVHEC ICGAEF+SGQALGGHMRRHR
Sbjct: 211 NNNSRSLVVY--------------GKASKNKVHECGICGAEFTSGQALGGHMRRHR 252

[Close]
BLAST of CsaV3_3G036200 vs. TAIR10
Match: AT3G10470.1 (C2H2-type zinc finger family protein)

HSP 1 Score: 90.1 bits (222), Expect = 2.1e-18
Identity = 51/115 (44.35%), Postives = 54/115 (46.96%), Query Frame = 0 

Query: 88  LYQCKTCDRCFPSFQALGGHRASHKKPKFFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 147
           +YQCKTCDR FPSFQALGGHRASHKKPK                                
Sbjct: 181 VYQCKTCDRTFPSFQALGGHRASHKKPK-----------AAMGLHSNHDHKKSNYDDAVS 240

Query: 148 XXXXXXXXXXXXXXXXXXXXXXAGDLIKSKVHECSICGAEFSSGQALGGHMRRHR 203
                                  G    +KVHEC ICGAEF+SGQALGGHMRRHR
Sbjct: 241 LHLNNVLTTTPNNNSNHRSLVVYGKGSNNKVHECGICGAEFTSGQALGGHMRRHR 284

[Close]
BLAST of CsaV3_3G036200 vs. TAIR10
Match: AT3G60580.1 (C2H2-like zinc finger protein)

HSP 1 Score: 65.9 bits (159), Expect = 4.3e-11
Identity = 44/150 (29.33%), Postives = 60/150 (40.00%), Query Frame = 0 

Query: 89  YQCKTCDRCFPSFQALGGHRASHKKPKFFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 148
           Y+C+TC + F S+QALGGHRASHKK +  N                              
Sbjct: 173 YKCETCGKVFKSYQALGGHRASHKKNRVSNNKTEQRSETEYDNVV--------------- 232

Query: 149 XXXXXXXXXXXXXXXXXXXXXAGDLIKSKVHECSICGAEFSSGQALGGHMRRHRALTATT 208
                                   ++  ++HEC IC   F+SGQALGGH R H     + 
Sbjct: 233 ------------------------VVAKRIHECPICLRVFASGQALGGHKRSHGVGNLSV 280

Query: 209 TRPITTTPQFIKKERNMLELDLNLPAPEDD 239
            +          K+R    +DLNLPAP ++
Sbjct: 293 NQQRRVHRNESVKQR---MIDLNLPAPTEE 280

[Close]
BLAST of CsaV3_3G036200 vs. Swiss-Prot
Match: sp|Q681X4|ZAT5_ARATH (Zinc finger protein ZAT5 OS=Arabidopsis thaliana OX=3702 GN=ZAT5 PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 8.8e-30
Identity = 85/228 (37.28%), Postives = 110/228 (48.25%), Query Frame = 0 

Query: 52  LANCLILLAQGRSRITEGC-SSVFVQQKLVAANESLFLYQCKTCDRCFPSFQALGGHRAS 111
           +A CLI+LA+G    +    +S  + QK+ + N S ++Y+CKTC+R F SFQALGGHRAS
Sbjct: 77  MAICLIMLARGTVLPSPDLKNSRKIHQKISSENSSFYVYECKTCNRTFSSFQALGGHRAS 136

Query: 112 HKKPKFFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 171
           HKKP+                                                      A
Sbjct: 137 HKKPR-----------------TSTEEKTRLPLTQPKSSASEEGQNSHFKVSGSALASQA 196

Query: 172 GDLIK--SKVHECSICGAEFSSGQALGGHMRRHRALTATTTRPITTTPQF---------- 231
            ++I   +KVHECSICG+EF+SGQALGGHMRRHR    TT  P+  T +           
Sbjct: 197 SNIINKANKVHECSICGSEFTSGQALGGHMRRHRT-AVTTISPVAATAEVSRNSTEEEIE 256

Query: 232 ------IKKERNMLELDLNLPAPEDDRHRPPV--AVFSTASPLVDCHY 259
                 ++++R  L LDLNLPAPEDD         VFS    L+DCHY
Sbjct: 257 INIGRSMEQQRKYLPLDLNLPAPEDDLRESKFQGIVFSATPALIDCHY 286

[Close]
BLAST of CsaV3_3G036200 vs. Swiss-Prot
Match: sp|Q9M202|ZAT9_ARATH (Zinc finger protein ZAT9 OS=Arabidopsis thaliana OX=3702 GN=ZAT9 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.8e-10
Identity = 44/150 (29.33%), Postives = 60/150 (40.00%), Query Frame = 0 

Query: 89  YQCKTCDRCFPSFQALGGHRASHKKPKFFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 148
           Y+C+TC + F S+QALGGHRASHKK +  N                              
Sbjct: 173 YKCETCGKVFKSYQALGGHRASHKKNRVSNNKTEQRSETEYDNVV--------------- 232

Query: 149 XXXXXXXXXXXXXXXXXXXXXAGDLIKSKVHECSICGAEFSSGQALGGHMRRHRALTATT 208
                                   ++  ++HEC IC   F+SGQALGGH R H     + 
Sbjct: 233 ------------------------VVAKRIHECPICLRVFASGQALGGHKRSHGVGNLSV 280

Query: 209 TRPITTTPQFIKKERNMLELDLNLPAPEDD 239
            +          K+R    +DLNLPAP ++
Sbjct: 293 NQQRRVHRNESVKQR---MIDLNLPAPTEE 280

[Close]
BLAST of CsaV3_3G036200 vs. Swiss-Prot
Match: sp|Q9SSW2|AZF2_ARATH (Zinc finger protein AZF2 OS=Arabidopsis thaliana OX=3702 GN=AZF2 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.5e-08
Identity = 56/193 (29.02%), Postives = 71/193 (36.79%), Query Frame = 0 

Query: 77  QKLVAANESLFL-YQCKTCDRCFPSFQALGGHRASHK-KPKFFNXXXXXXXXXXXXXXXX 136
           Q L    ES  L Y+C  C++ FPS+QALGGH+ASH+ KP                    
Sbjct: 93  QSLTPPPESKNLPYKCNVCEKAFPSYQALGGHKASHRIKP-------------------- 152

Query: 137 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGD----LIKSKVHECSICGAEFSS 196
                                              AG+        K+HECSIC   F +
Sbjct: 153 ----------------PTVISTTADDSTAPTISIVAGEKHPIAASGKIHECSICHKVFPT 212

Query: 197 GQALGGHMRRH--------RALTATTTRPITTTPQFIKKERNMLE-LDLNLPA-PEDDRH 254
           GQALGGH R H                    +    + +ER+    +DLNLPA PE   H
Sbjct: 213 GQALGGHKRCHYEGNLGXXXXXXXXXXXXXXSVSSTVSEERSHRGFIDLNLPALPELSLH 249

[Close]
BLAST of CsaV3_3G036200 vs. Swiss-Prot
Match: sp|Q9SLD4|ZAT11_ARATH (Zinc finger protein ZAT11 OS=Arabidopsis thaliana OX=3702 GN=ZAT11 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.6e-07
Identity = 30/64 (46.88%), Postives = 40/64 (62.50%), Query Frame = 0 

Query: 52  LANCLILLAQGRSRITEGCSSVFVQQKLVAANESLFLYQCKTCDRCFPSFQALGGHRASH 111
           +A CL++LAQ     T     + + Q   +   + F  +CKTC++ F SFQALGGHRASH
Sbjct: 17  IAKCLMILAQ-----TSMVKQIGLNQHTESHTSNQF--ECKTCNKRFSSFQALGGHRASH 73

Query: 112 KKPK 116
           KKPK
Sbjct: 77  KKPK 73

[Close]
BLAST of CsaV3_3G036200 vs. Swiss-Prot
Match: sp|Q42410|ZAT12_ARATH (Zinc finger protein ZAT12 OS=Arabidopsis thaliana OX=3702 GN=ZAT12 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.2e-06
Identity = 29/62 (46.77%), Postives = 37/62 (59.68%), Query Frame = 0 

Query: 53  ANCLILLAQGRSRITEGCSSVFVQQKLVAANESLFLYQCKTCDRCFPSFQALGGHRASHK 112
           ANCL+LL++             V Q+ V   +   ++ CKTC + F SFQALGGHRASHK
Sbjct: 16  ANCLMLLSR-------------VGQENVDGGDQKRVFTCKTCLKQFHSFQALGGHRASHK 64

Query: 113 KP 115
           KP
Sbjct: 76  KP 64

[Close]
BLAST of CsaV3_3G036200 vs. TrEMBL
Match: tr|A0A0A0LDR8|A0A0A0LDR8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G743410 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.3e-89
Identity = 257/258 (99.61%), Postives = 257/258 (99.61%), Query Frame = 0 

Query: 1   MAETPDENQAQIIKGKRTKRLRPSSXXXXXXXXXXXXXXXXXXXXXXXXXXLANCLILLA 60
           MAETPDENQAQIIKGKRTKRLRPSSXXXXXXXXXXXXXXXXXXXXXXXXXXLANCLILLA
Sbjct: 1   MAETPDENQAQIIKGKRTKRLRPSSXXXXXXXXXXXXXXXXXXXXXXXXXXLANCLILLA 60

Query: 61  QGRSRITEGCSSVFVQQKLVAANESLFLYQCKTCDRCFPSFQALGGHRASHKKPKFFNXX 120
           QGRSRITEGCSSVFVQQKLVAANESLFLYQCKTCDRCFPSFQALGGHRASHKKPKFFN X
Sbjct: 61  QGRSRITEGCSSVFVQQKLVAANESLFLYQCKTCDRCFPSFQALGGHRASHKKPKFFN-X 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDLIKSKVHE 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDLIKSKVHE
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDLIKSKVHE 180

Query: 181 CSICGAEFSSGQALGGHMRRHRALTATTTRPITTTPQFIKKERNMLELDLNLPAPEDDRH 240
           CSICGAEFSSGQALGGHMRRHRALTATTTRPITTTPQFIKKERNMLELDLNLPAPEDDRH
Sbjct: 181 CSICGAEFSSGQALGGHMRRHRALTATTTRPITTTPQFIKKERNMLELDLNLPAPEDDRH 240

Query: 241 RPPVAVFSTASPLVDCHY 259
           RPPVAVFSTASPLVDCHY
Sbjct: 241 RPPVAVFSTASPLVDCHY 257

[Close]
BLAST of CsaV3_3G036200 vs. TrEMBL
Match: tr|A0A1S3B5W6|A0A1S3B5W6_CUCME (zinc finger protein ZAT5-like OS=Cucumis melo OX=3656 GN=LOC103486519 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 8.4e-86
Identity = 246/259 (94.98%), Postives = 247/259 (95.37%), Query Frame = 0 

Query: 1   MAETPDENQAQIIKGKRTKRLRPSSXXXXXXXXXXXXXXXXXXXXXXXXXXLANCLILLA 60
           MAETPDENQAQIIKGKRTKRLRPSSXXXXXXXXXXXXXXXXXXXXXXXXXXLANCLILLA
Sbjct: 1   MAETPDENQAQIIKGKRTKRLRPSSXXXXXXXXXXXXXXXXXXXXXXXXXXLANCLILLA 60

Query: 61  QGRSRITEGCSSVFVQQKLVAANESLFLYQCKTCDRCFPSFQALGGHRASHKKPKFFNXX 120
           QGRSRITEGCSSVFV+QKLVAANESLFLYQCKTCDRCFPSFQALGGHRASHKKPKF    
Sbjct: 61  QGRSRITEGCSSVFVEQKLVAANESLFLYQCKTCDRCFPSFQALGGHRASHKKPKF---- 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDLIKSKVHE 180
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDLIKSKVHE
Sbjct: 121 ------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDLIKSKVHE 180

Query: 181 CSICGAEFSSGQALGGHMRRHRALTATTTRPITT-TPQFIKKERNMLELDLNLPAPEDDR 240
           CSICGAEFSSGQALGGHMRRHR LTATTTRPITT TPQFIKKERNMLELDLNLPAPEDDR
Sbjct: 181 CSICGAEFSSGQALGGHMRRHRTLTATTTRPITTSTPQFIKKERNMLELDLNLPAPEDDR 240

Query: 241 HRPPVAVFSTASPLVDCHY 259
           HRPPVAVFSTASPLVDCHY
Sbjct: 241 HRPPVAVFSTASPLVDCHY 249

[Close]
BLAST of CsaV3_3G036200 vs. TrEMBL
Match: tr|A0A2H5QKA6|A0A2H5QKA6_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_238240 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 1.1e-37
Identity = 114/292 (39.04%), Postives = 131/292 (44.86%), Query Frame = 0 

Query: 5   PDENQAQIIKGKRTKRLRPSS------------------XXXXXXXXXXXXXXXXXXXXX 64
           P +    I+KGKRTKR RP S                                       
Sbjct: 18  PKDQTQIIMKGKRTKRPRPQSPLALGMVYSCSSSLESGGEGERIFSTNSPTTSVEFATTT 77

Query: 65  XXXXXLANCLILLAQG-RSRITEGCSSVFVQQ-----KLVAANESLFLYQCKTCDRCFPS 124
                +ANCLILLAQG   +I+   SS  + Q     K  A    L+++QCKTC+RCFPS
Sbjct: 78  EQEEDMANCLILLAQGDAKKISSSSSSHPLDQPATTSKAAAVATGLYVHQCKTCNRCFPS 137

Query: 125 FQALGGHRASHKKPKFFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 184
           FQALGGHRASHKKPK  N                                          
Sbjct: 138 FQALGGHRASHKKPKVINNNNIEASKKAFVLMDKEDDRFSNMSTTLSLQMANNRDAANLC 197

Query: 185 XXXXXXXXXAGDLIKSKVHECSICGAEFSSGQALGGHMRRHRALTATTT-------RPIT 244
                          +KVHECSICGAEFSSGQALGGHMRRHRA T +TT         + 
Sbjct: 198 ARTNNK--------ANKVHECSICGAEFSSGQALGGHMRRHRAFTTSTTALSMGTSSSLD 257

Query: 245 TTPQFIKKERNMLELDLNLPAPEDDRHRPPVA-------VFSTASPLVDCHY 259
              Q  KK RN+L+LDLNLPAPEDDRH    A       +  +ASPLVDCHY
Sbjct: 258 RQSQQAKKPRNILQLDLNLPAPEDDRHESKFAFASKEQVIIFSASPLVDCHY 301

[Close]
BLAST of CsaV3_3G036200 vs. TrEMBL
Match: tr|A0A1U7Z6Q2|A0A1U7Z6Q2_NELNU (zinc finger protein ZAT5 OS=Nelumbo nucifera OX=4432 GN=LOC104587339 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 3.0e-35
Identity = 96/228 (42.11%), Postives = 111/228 (48.68%), Query Frame = 0 

Query: 52  LANCLILLAQGRS-----RITEGCSSVFVQQKLVA-------ANESLFLYQCKTCDRCFP 111
           +ANCLILLAQG       RI EG +      +  A       A    ++Y+CKTC+RCFP
Sbjct: 83  MANCLILLAQGHGRDSPRRIEEGGAMERASSRRFAEAATTTTAKAGFYVYECKTCNRCFP 142

Query: 112 SFQALGGHRASHKKPKFFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 171
           SFQALGGHRASHKKPK                                            
Sbjct: 143 SFQALGGHRASHKKPK-----------AMAEDKKSLMALSPEEDEPQFTHNSIPSSLLPL 202

Query: 172 XXXXXXXXXXAGDLIKSKVHECSICGAEFSSGQALGGHMRRHRALTATTTRPITTTPQFI 231
                          KS+VHECSICG+EFSSGQALGGHMRRHR+   TT  P   +P   
Sbjct: 203 QIGNRVVYNSTTTTTKSRVHECSICGSEFSSGQALGGHMRRHRSAPTTTISPTPDSPDAA 262

Query: 232 KKERNMLELDLNLPAPEDDRHRPPVAVFS---------TASPLVDCHY 259
           KK R +L LDLNLPAP +D HR P   F+         +AS LVDCHY
Sbjct: 263 KKPRTVLSLDLNLPAPTEDDHREPKFPFASKQQPSLIFSASALVDCHY 299

[Close]
BLAST of CsaV3_3G036200 vs. TrEMBL
Match: tr|A0A061ET06|A0A061ET06_THECC (Nucleic acid binding protein, putative OS=Theobroma cacao OX=3641 GN=TCM_022299 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 3.4e-34
Identity = 110/298 (36.91%), Postives = 127/298 (42.62%), Query Frame = 0 

Query: 7   ENQAQIIKGKRTKRLRP-----------------------------SSXXXXXXXXXXXX 66
           ++Q QIIKGKRTKR RP                             S             
Sbjct: 14  KDQLQIIKGKRTKRPRPLSPLTLXXXXXXXXXXXXXXXXXXXXXXXSRGLERAVASPTTS 73

Query: 67  XXXXXXXXXXXXXXLANCLILLAQGRSRITEGCSSVFVQQKLVAANESLFLYQCKTCDRC 126
                         +ANCLILLAQG++RI     +         +   ++++QCKTC+RC
Sbjct: 74  VDELTEISTEEEEDMANCLILLAQGQTRIKPSEPASLA----TTSKTGIYVHQCKTCNRC 133

Query: 127 FPSFQALGGHRASHKKPKFFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 186
           F SFQALGGHRASHKKPK  N                                       
Sbjct: 134 FSSFQALGGHRASHKKPKVNNEENKGLVFVREDDDQFNNMNTALSLQITNKAVLC----- 193

Query: 187 XXXXXXXXXXXXAGDLIKSKVHECSICGAEFSSGQALGGHMRRHRALTATTTRPITTT-- 246
                         +  KSKVHECSICGAEFSSGQALGGHMRRHR  T   T   TT   
Sbjct: 194 --------------NSSKSKVHECSICGAEFSSGQALGGHMRRHRTFTNVPTTTATTALS 253

Query: 247 -------PQFIKKERNMLELDLNLPAPEDDRHRPPVAVFS--------TASPLVDCHY 259
                   Q  KK R +L+LDLNLPAPEDD HR     F+        +AS LVDCHY
Sbjct: 254 VGTRSPESQESKKPRTVLQLDLNLPAPEDDHHRETKFSFASKEKLLVFSASSLVDCHY 288

The following BLAST results are available for this feature:
BLAST of CsaV3_3G036200 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011652845.11.9e-8999.61PREDICTED: zinc finger protein ZAT5-like [Cucumis sativus] >KGN59004.1 hypotheti... [more]
XP_008442730.11.3e-8594.98PREDICTED: zinc finger protein ZAT5-like [Cucumis melo][more]
XP_022934069.19.8e-6269.89zinc finger protein ZAT5-like [Cucurbita moschata][more]
XP_023005952.11.1e-6064.53zinc finger protein ZAT5-like [Cucurbita maxima][more]
XP_022936966.13.2e-6064.15zinc finger protein ZAT5-like [Cucurbita moschata][more]
BLAST of CsaV3_3G036200 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G28200.14.9e-3137.28C2H2-type zinc finger family protein[more]
AT5G03510.13.9e-2838.14C2H2-type zinc finger family protein[more]
AT5G04390.11.1e-1944.83C2H2-type zinc finger family protein[more]
AT3G10470.12.1e-1844.35C2H2-type zinc finger family protein[more]
AT3G60580.14.3e-1129.33C2H2-like zinc finger protein[more]
BLAST of CsaV3_3G036200 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q681X4|ZAT5_ARATH8.8e-3037.28Zinc finger protein ZAT5 OS=Arabidopsis thaliana OX=3702 GN=ZAT5 PE=2 SV=1[more]
sp|Q9M202|ZAT9_ARATH7.8e-1029.33Zinc finger protein ZAT9 OS=Arabidopsis thaliana OX=3702 GN=ZAT9 PE=2 SV=1[more]
sp|Q9SSW2|AZF2_ARATH2.5e-0829.02Zinc finger protein AZF2 OS=Arabidopsis thaliana OX=3702 GN=AZF2 PE=2 SV=1[more]
sp|Q9SLD4|ZAT11_ARATH3.6e-0746.88Zinc finger protein ZAT11 OS=Arabidopsis thaliana OX=3702 GN=ZAT11 PE=2 SV=1[more]
sp|Q42410|ZAT12_ARATH5.2e-0646.77Zinc finger protein ZAT12 OS=Arabidopsis thaliana OX=3702 GN=ZAT12 PE=2 SV=1[more]
BLAST of CsaV3_3G036200 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LDR8|A0A0A0LDR8_CUCSA1.3e-8999.61Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G743410 PE=4 SV=1[more]
tr|A0A1S3B5W6|A0A1S3B5W6_CUCME8.4e-8694.98zinc finger protein ZAT5-like OS=Cucumis melo OX=3656 GN=LOC103486519 PE=4 SV=1[more]
tr|A0A2H5QKA6|A0A2H5QKA6_CITUN1.1e-3739.04Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_238240 PE=4 SV=1[more]
tr|A0A1U7Z6Q2|A0A1U7Z6Q2_NELNU3.0e-3542.11zinc finger protein ZAT5 OS=Nelumbo nucifera OX=4432 GN=LOC104587339 PE=4 SV=1[more]
tr|A0A061ET06|A0A061ET06_THECC3.4e-3436.91Nucleic acid binding protein, putative OS=Theobroma cacao OX=3641 GN=TCM_022299 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR036236Znf_C2H2_sf
IPR013087Znf_C2H2_type
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G036200.1CsaV3_3G036200.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 179..201
e-value: 0.01
score: 25.0
coord: 89..111
e-value: 0.077
score: 22.1
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 181..201
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 91..111
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 179..206
score: 9.868
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 89..116
score: 9.847
NoneNo IPR availablePFAMPF13912zf-C2H2_6coord: 89..113
e-value: 5.4E-10
score: 38.9
coord: 178..203
e-value: 3.8E-13
score: 48.9
NoneNo IPR availableGENE3DG3DSA:3.30.160.60coord: 171..227
e-value: 2.9E-5
score: 25.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..146
NoneNo IPR availablePANTHERPTHR26374FAMILY NOT NAMEDcoord: 12..244
NoneNo IPR availablePANTHERPTHR26374:SF318C2H2-TYPE ZINC FINGER PROTEIN-RELATEDcoord: 12..244
IPR036236Zinc finger C2H2 superfamilySUPERFAMILYSSF57667beta-beta-alpha zinc fingerscoord: 88..117
IPR036236Zinc finger C2H2 superfamilySUPERFAMILYSSF57667beta-beta-alpha zinc fingerscoord: 175..202

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G036200CSPI03G33590Wild cucumber (PI 183967)cpicucB144
CsaV3_3G036200CSPI06G11960Wild cucumber (PI 183967)cpicucB338
CsaV3_3G036200Cucsa.385670Cucumber (Gy14) v1cgycucB584
CsaV3_3G036200Cucsa.306530Cucumber (Gy14) v1cgycucB472
CsaV3_3G036200CmaCh02G013750Cucurbita maxima (Rimu)cmacucB0725
CsaV3_3G036200CmaCh14G002350Cucurbita maxima (Rimu)cmacucB0279
CsaV3_3G036200CmaCh20G005290Cucurbita maxima (Rimu)cmacucB0656
CsaV3_3G036200CmoCh14G002260Cucurbita moschata (Rifu)cmocucB0270
CsaV3_3G036200CmoCh06G003960Cucurbita moschata (Rifu)cmocucB0954
CsaV3_3G036200CmoCh02G014090Cucurbita moschata (Rifu)cmocucB0712
CsaV3_3G036200CmoCh20G005600Cucurbita moschata (Rifu)cmocucB0643
CsaV3_3G036200Cp4.1LG03g01500Cucurbita pepo (Zucchini)cpecucB0747
CsaV3_3G036200Cp4.1LG16g05110Cucurbita pepo (Zucchini)cpecucB0343
CsaV3_3G036200Cp4.1LG08g10760Cucurbita pepo (Zucchini)cpecucB1057
CsaV3_3G036200CsGy6G012040Cucumber (Gy14) v2cgybcucB273
CsaV3_3G036200CsGy3G031410Cucumber (Gy14) v2cgybcucB117
CsaV3_3G036200Carg00959Silver-seed gourdcarcucB0181
CsaV3_3G036200Carg03741Silver-seed gourdcarcucB0279
CsaV3_3G036200Carg02594Silver-seed gourdcarcucB0958
CsaV3_3G036200Cla017782Watermelon (97103) v1cucwmB208
CsaV3_3G036200Cla008697Watermelon (97103) v1cucwmB276
CsaV3_3G036200MELO3C009378Melon (DHL92) v3.5.1cucmeB218
CsaV3_3G036200ClCG02G021630Watermelon (Charleston Gray)cucwcgB215
CsaV3_3G036200ClCG10G019900Watermelon (Charleston Gray)cucwcgB199
CsaV3_3G036200Lsi10G012200Bottle gourd (USVL1VR-Ls)cuclsiB177
CsaV3_3G036200Lsi03G019880Bottle gourd (USVL1VR-Ls)cuclsiB203
CsaV3_3G036200MELO3C009378.2Melon (DHL92) v3.6.1cucmedB211
CsaV3_3G036200Cla97C10G203050Watermelon (97103) v2cucwmbB187
CsaV3_3G036200Cla97C02G047690Watermelon (97103) v2cucwmbB197
CsaV3_3G036200Bhi11G001742Wax gourdcucwgoB240
CsaV3_3G036200Bhi04G001049Wax gourdcucwgoB326
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CsaV3_3G036200CsaV3_5G035890Cucumber (Chinese Long) v3cuccucB133
CsaV3_3G036200CsaV3_6G014410Cucumber (Chinese Long) v3cuccucB140
The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G036200Cucumber (Chinese Long) v3cuccucB136
CsaV3_3G036200Cucumber (Gy14) v2cgybcucB268
CsaV3_3G036200Cucumber (Gy14) v1cgycucB170
CsaV3_3G036200Cucurbita maxima (Rimu)cmacucB0789
CsaV3_3G036200Cucurbita maxima (Rimu)cmacucB0966
CsaV3_3G036200Cucurbita maxima (Rimu)cmacucB1014
CsaV3_3G036200Cucurbita moschata (Rifu)cmocucB0772
CsaV3_3G036200Cucurbita moschata (Rifu)cmocucB0997
CsaV3_3G036200Cucurbita pepo (Zucchini)cpecucB0070
CsaV3_3G036200Cucurbita pepo (Zucchini)cpecucB0594
CsaV3_3G036200Wild cucumber (PI 183967)cpicucB334
CsaV3_3G036200Bottle gourd (USVL1VR-Ls)cuclsiB185
CsaV3_3G036200Melon (DHL92) v3.5.1cucmeB261
CsaV3_3G036200Melon (DHL92) v3.6.1cucmedB256
CsaV3_3G036200Watermelon (Charleston Gray)cucwcgB224
CsaV3_3G036200Watermelon (97103) v1cucwmB275
CsaV3_3G036200Watermelon (97103) v2cucwmbB190
CsaV3_3G036200Watermelon (97103) v2cucwmbB205
CsaV3_3G036200Wax gourdcucwgoB336