Carg00959 (gene) Silver-seed gourd

Overview
NameCarg00959
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionzinc finger protein ZAT5-like
LocationCucurbita_argyrosperma_scaffold_002 : 255000 .. 255692 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGAAACTCCAGATGAAAATCAAGCCCAATTCATGAAGGGAAAGCGAACCAAACGCACCAGGCCTCCCTCTGTTGCTTCATCTTCCAGCGCTGATTGTTCCAGTTCGTCGGCGGGGCTTACAGAGCAAGAAGAAGAAGATCAAGATTTGGCCAATTGTTTGATTCTTTTGGCGCAGGGGAGAACAGGGGATTGCGCCTCTGTTTTGGTTCAACACAATCAATCTCTGTTTGCTTATCAGTGCAAGACTTGCGATCGTTGTTTTCCTTCTTTTCAAGCCTTGGGTGGACATAGAGCTAGCCATAAGAAACCCAAAATCTCTAATTCTCTTCAAACCCACGACCCTCAATTTCACCTCTCCTTGCAGTTATCCACCGGCCGACCACCGGCCAGTTTCGCCGCCGGTGACCTCGTTAAATCTAAGGTTCATGAGTGTTCCATTTGTGGAGCGGAGTTTTCTTCTGGGCAGGCACTTGGTGGTCATATGAGACGACATAGAGCGTTGACCTCTACGGCGTCGGTGCCGAGTAGAGGTGCTGCTGCTACGCCGCAGTTGCAGGAGTTAATGATTAAGAAAGAGAGAAATGTGTTGGAGTTGGATCTTAACCTTCCGGCGCCTGAGGATGACCGGCACCGGACGGCGGTGTCTGTGTTCTCCGCCGCATCGTCGCTGGTGGATTGTCATTACTGA

mRNA sequence

ATGGCGGAAACTCCAGATGAAAATCAAGCCCAATTCATGAAGGGAAAGCGAACCAAACGCACCAGGCCTCCCTCTGTTGCTTCATCTTCCAGCGCTGATTGTTCCAGTTCGTCGGCGGGGCTTACAGAGCAAGAAGAAGAAGATCAAGATTTGGCCAATTGTTTGATTCTTTTGGCGCAGGGGAGAACAGGGGATTGCGCCTCTGTTTTGGTTCAACACAATCAATCTCTGTTTGCTTATCAGTGCAAGACTTGCGATCGTTGTTTTCCTTCTTTTCAAGCCTTGGGTGGACATAGAGCTAGCCATAAGAAACCCAAAATCTCTAATTCTCTTCAAACCCACGACCCTCAATTTCACCTCTCCTTGCAGTTATCCACCGGCCGACCACCGGCCAGTTTCGCCGCCGGTGACCTCGTTAAATCTAAGGTTCATGAGTGTTCCATTTGTGGAGCGGAGTTTTCTTCTGGGCAGGCACTTGGTGGTCATATGAGACGACATAGAGCGTTGACCTCTACGGCGTCGGTGCCGAGTAGAGGTGCTGCTGCTACGCCGCAGTTGCAGGAGTTAATGATTAAGAAAGAGAGAAATGTGTTGGAGTTGGATCTTAACCTTCCGGCGCCTGAGGATGACCGGCACCGGACGGCGGTGTCTGTGTTCTCCGCCGCATCGTCGCTGGTGGATTGTCATTACTGA

Coding sequence (CDS)

ATGGCGGAAACTCCAGATGAAAATCAAGCCCAATTCATGAAGGGAAAGCGAACCAAACGCACCAGGCCTCCCTCTGTTGCTTCATCTTCCAGCGCTGATTGTTCCAGTTCGTCGGCGGGGCTTACAGAGCAAGAAGAAGAAGATCAAGATTTGGCCAATTGTTTGATTCTTTTGGCGCAGGGGAGAACAGGGGATTGCGCCTCTGTTTTGGTTCAACACAATCAATCTCTGTTTGCTTATCAGTGCAAGACTTGCGATCGTTGTTTTCCTTCTTTTCAAGCCTTGGGTGGACATAGAGCTAGCCATAAGAAACCCAAAATCTCTAATTCTCTTCAAACCCACGACCCTCAATTTCACCTCTCCTTGCAGTTATCCACCGGCCGACCACCGGCCAGTTTCGCCGCCGGTGACCTCGTTAAATCTAAGGTTCATGAGTGTTCCATTTGTGGAGCGGAGTTTTCTTCTGGGCAGGCACTTGGTGGTCATATGAGACGACATAGAGCGTTGACCTCTACGGCGTCGGTGCCGAGTAGAGGTGCTGCTGCTACGCCGCAGTTGCAGGAGTTAATGATTAAGAAAGAGAGAAATGTGTTGGAGTTGGATCTTAACCTTCCGGCGCCTGAGGATGACCGGCACCGGACGGCGGTGTCTGTGTTCTCCGCCGCATCGTCGCTGGTGGATTGTCATTACTGA

Protein sequence

MAETPDENQAQFMKGKRTKRTRPPSVASSSSADCSSSSAGLTEQEEEDQDLANCLILLAQGRTGDCASVLVQHNQSLFAYQCKTCDRCFPSFQALGGHRASHKKPKISNSLQTHDPQFHLSLQLSTGRPPASFAAGDLVKSKVHECSICGAEFSSGQALGGHMRRHRALTSTASVPSRGAAATPQLQELMIKKERNVLELDLNLPAPEDDRHRTAVSVFSAASSLVDCHY
Homology
[Close]
BLAST of Carg00959 vs. NCBI nr
Match: XP_022936966.1 (zinc finger protein ZAT5-like [Cucurbita moschata])

HSP 1 Score: 402.5 bits (1033), Expect = 9.5e-109
Identity = 229/230 (99.57%), Postives = 230/230 (100.00%), Query Frame = 0 

Query: 1   MAETPDENQAQFMKGKRTKRTRPXXXXXXXXXXXXXXXXXXXXXXXXXXDLANCLILLAQ 60
           MAETPDENQAQF+KGKRTKRTRPXXXXXXXXXXXXXXXXXXXXXXXXXXDLANCLILLAQ
Sbjct: 1   MAETPDENQAQFIKGKRTKRTRPXXXXXXXXXXXXXXXXXXXXXXXXXXDLANCLILLAQ 60

Query: 61  GRTGDCASVLVQHNQSLFAYQCKTCDRCFPSFQALGGHRASHKKPKISNSLQTHDPQFHL 120
           GRTGDCASVLVQHNQSLFAYQCKTCDRCFPSFQALGGHRASHKKPKISNSLQTHDPQFHL
Sbjct: 61  GRTGDCASVLVQHNQSLFAYQCKTCDRCFPSFQALGGHRASHKKPKISNSLQTHDPQFHL 120

Query: 121 SLQLSTGRPPASFAAGDLVKSKVHECSICGAEFSSGQALGGHMRRHRALTSTASVPSRGA 180
           SLQLSTGRPPASFAAGDLVKSKVHECSICGAEFSSGQALGGHMRRHRALTSTASVPSRGA
Sbjct: 121 SLQLSTGRPPASFAAGDLVKSKVHECSICGAEFSSGQALGGHMRRHRALTSTASVPSRGA 180

Query: 181 AATPQLQELMIKKERNVLELDLNLPAPEDDRHRTAVSVFSAASSLVDCHY 231
           AATPQLQELMIKKERNVLELDLNLPAPEDDRHRTAVSVFSAASSLVDCHY
Sbjct: 181 AATPQLQELMIKKERNVLELDLNLPAPEDDRHRTAVSVFSAASSLVDCHY 230

[Close]
BLAST of Carg00959 vs. NCBI nr
Match: XP_023540997.1 (zinc finger protein ZAT5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 396.0 bits (1016), Expect = 8.9e-107
Identity = 225/230 (97.83%), Postives = 229/230 (99.57%), Query Frame = 0 

Query: 1   MAETPDENQAQFMKGKRTKRTRPXXXXXXXXXXXXXXXXXXXXXXXXXXDLANCLILLAQ 60
           MAETPDENQAQF+KGKRTKRTRPXXXXXXXXXXXXXXXXXXXXXXXXXXDLANCLILLAQ
Sbjct: 1   MAETPDENQAQFIKGKRTKRTRPXXXXXXXXXXXXXXXXXXXXXXXXXXDLANCLILLAQ 60

Query: 61  GRTGDCASVLVQHNQSLFAYQCKTCDRCFPSFQALGGHRASHKKPKISNSLQTHDPQFHL 120
           GRTGDCASVLVQHNQSLFAYQCKTCDRCFPSFQALGGHRASHKKPKISNSLQTHDPQFHL
Sbjct: 61  GRTGDCASVLVQHNQSLFAYQCKTCDRCFPSFQALGGHRASHKKPKISNSLQTHDPQFHL 120

Query: 121 SLQLSTGRPPASFAAGDLVKSKVHECSICGAEFSSGQALGGHMRRHRALTSTASVPSRGA 180
           SLQLSTGRPPASFAAGD+VKSKVHECSICGAEFSSGQALGGHMRRHRALTSTASV SRGA
Sbjct: 121 SLQLSTGRPPASFAAGDVVKSKVHECSICGAEFSSGQALGGHMRRHRALTSTASVASRGA 180

Query: 181 AATPQLQELMIKKERNVLELDLNLPAPEDDRHRTAVSVFSAASSLVDCHY 231
           AATPQLQELMIKKERN+LELDLNLPAPEDDRHRTAV+VFSAASSLVDCHY
Sbjct: 181 AATPQLQELMIKKERNLLELDLNLPAPEDDRHRTAVAVFSAASSLVDCHY 230

[Close]
BLAST of Carg00959 vs. NCBI nr
Match: XP_023005952.1 (zinc finger protein ZAT5-like [Cucurbita maxima])

HSP 1 Score: 395.6 bits (1015), Expect = 1.2e-106
Identity = 225/230 (97.83%), Postives = 228/230 (99.13%), Query Frame = 0 

Query: 1   MAETPDENQAQFMKGKRTKRTRPXXXXXXXXXXXXXXXXXXXXXXXXXXDLANCLILLAQ 60
           MAETPDENQAQF+KGKRTKRTRPXXXXXXXXXXXXXXXXXXXXXXXXXXDLANCLILLAQ
Sbjct: 1   MAETPDENQAQFIKGKRTKRTRPXXXXXXXXXXXXXXXXXXXXXXXXXXDLANCLILLAQ 60

Query: 61  GRTGDCASVLVQHNQSLFAYQCKTCDRCFPSFQALGGHRASHKKPKISNSLQTHDPQFHL 120
           GRTGDCASVLVQHNQSLFAYQCKTCDRCFPSFQALGGHRASHKKPKISNSLQTHDPQFHL
Sbjct: 61  GRTGDCASVLVQHNQSLFAYQCKTCDRCFPSFQALGGHRASHKKPKISNSLQTHDPQFHL 120

Query: 121 SLQLSTGRPPASFAAGDLVKSKVHECSICGAEFSSGQALGGHMRRHRALTSTASVPSRGA 180
           SLQLSTGRPPASFAAGD+VKSKVHECSICGAEFSSGQALGGHMRRHRALTSTASV SRGA
Sbjct: 121 SLQLSTGRPPASFAAGDVVKSKVHECSICGAEFSSGQALGGHMRRHRALTSTASVASRGA 180

Query: 181 AATPQLQELMIKKERNVLELDLNLPAPEDDRHRTAVSVFSAASSLVDCHY 231
            ATPQLQELMIKKERNVLELDLNLPAPEDDRHRTAV+VFSAASSLVDCHY
Sbjct: 181 TATPQLQELMIKKERNVLELDLNLPAPEDDRHRTAVAVFSAASSLVDCHY 230

[Close]
BLAST of Carg00959 vs. NCBI nr
Match: XP_022934069.1 (zinc finger protein ZAT5-like [Cucurbita moschata])

HSP 1 Score: 252.3 bits (643), Expect = 1.6e-63
Identity = 178/256 (69.53%), Postives = 191/256 (74.61%), Query Frame = 0 

Query: 1   MAETPDENQAQFMKGKRT-KRTRPXXXXXXXXXXXXXXXXXXXXXXXXXXDLANCLILLA 60
           MAETPDENQAQ MKGKRT      XXXXXXXXXXXXXXXXXXXXXXXXXXDLANCL+LLA
Sbjct: 1   MAETPDENQAQIMKGKRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLANCLMLLA 60

Query: 61  QG--RTGDCAS-----VLVQH----NQSLFAYQCKTCDRCFPSFQALGGHRASHKKPKIS 120
           QG  RTG C+S     VLV+     NQSLF YQCKTCDR FPSFQALGGHRASHKKPK +
Sbjct: 61  QGRTRTGACSSSSSSPVLVRQKLAANQSLFLYQCKTCDRYFPSFQALGGHRASHKKPKFN 120

Query: 121 NSLQTHDPQFH--------LSLQLS----TGRPPASFAAGDLVKSKVHECSICGAEFSSG 180
           N + T  PQ H        LSLQLS               DL+K KVHECSICGAEFSSG
Sbjct: 121 NIVNTSVPQPHFTPSDSIQLSLQLSXXXXXXXXXXXXXXNDLIKPKVHECSICGAEFSSG 180

Query: 181 QALGGHMRRHRALTSTASVPSRGA--AATPQLQELMIKKERNVLELDLNLPAPEDDRHRT 231
           QALGGHMRRHRALT+    P+RGA    TPQLQ+LM KK+RN+LELDLNLPAPE+DRHR 
Sbjct: 181 QALGGHMRRHRALTAN---PTRGATTTTTPQLQDLMSKKKRNMLELDLNLPAPEEDRHRP 240

[Close]
BLAST of Carg00959 vs. NCBI nr
Match: XP_011652845.1 (PREDICTED: zinc finger protein ZAT5-like [Cucumis sativus] >KGN59004.1 hypothetical protein Csa_3G743410 [Cucumis sativus])

HSP 1 Score: 239.2 bits (609), Expect = 1.4e-59
Identity = 169/264 (64.02%), Postives = 177/264 (67.05%), Query Frame = 0 

Query: 1   MAETPDENQAQFMKGKRTKRTRP-XXXXXXXXXXXXXXXXXXXXXXXXXXDLANCLILLA 60
           MAETPDENQAQ +KGKRTKR RP  XXXXXXXXXXXXXXXXXXXXXXXXX LANCLILLA
Sbjct: 1   MAETPDENQAQIIKGKRTKRLRPSSXXXXXXXXXXXXXXXXXXXXXXXXXXLANCLILLA 60

Query: 61  QGR---TGDCASVLVQH-----NQSLFAYQCKTCDRCFPSFQALGGHRASHKKPKISN-- 120
           QGR   T  C+SV VQ      N+SLF YQCKTCDRCFPSFQALGGHRASHKKPK  N  
Sbjct: 61  QGRSRITEGCSSVFVQQKLVAANESLFLYQCKTCDRCFPSFQALGGHRASHKKPKFFNXX 120

Query: 121 -----------------------SLQTHDPQFHLSLQLSTGRPPASFAAGDLVKSKVHEC 180
                                                           AGDL+KSKVHEC
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDLIKSKVHEC 180

Query: 181 SICGAEFSSGQALGGHMRRHRALTSTASVPSRGAAATPQLQELMIKKERNVLELDLNLPA 231
           SICGAEFSSGQALGGHMRRHRALT+T + P      TPQ     IKKERN+LELDLNLPA
Sbjct: 181 SICGAEFSSGQALGGHMRRHRALTATTTRP---ITTTPQ----FIKKERNMLELDLNLPA 240

[Close]
BLAST of Carg00959 vs. TAIR10
Match: AT2G28200.1 (C2H2-type zinc finger family protein)

HSP 1 Score: 149.1 bits (375), Expect = 3.4e-36
Identity = 92/211 (43.60%), Postives = 117/211 (55.45%), Query Frame = 0 

Query: 50  DLANCLILLAQG---------RTGDCASVLVQHNQSLFAYQCKTCDRCFPSFQALGGHRA 109
           D+A CLI+LA+G          +      +   N S + Y+CKTC+R F SFQALGGHRA
Sbjct: 76  DMAICLIMLARGTVLPSPDLKNSRKIHQKISSENSSFYVYECKTCNRTFSSFQALGGHRA 135

Query: 110 SHKKPKISNSLQTHDPQFHLSLQLS----------TGRPPASFAAGDLVK-SKVHECSIC 169
           SHKKP+ S   +T  P        S          +G   AS A+  + K +KVHECSIC
Sbjct: 136 SHKKPRTSTEEKTRLPLTQPKSSASEEGQNSHFKVSGSALASQASNIINKANKVHECSIC 195

Query: 170 GAEFSSGQALGGHMRRHRALTSTASVPSRGAAATPQLQELMI--------KKERNVLELD 229
           G+EF+SGQALGGHMRRHR   +T S  +  A  +    E  I        +++R  L LD
Sbjct: 196 GSEFTSGQALGGHMRRHRTAVTTISPVAATAEVSRNSTEEEIEINIGRSMEQQRKYLPLD 255

Query: 230 LNLPAPEDDRHRTAVS--VFSAASSLVDCHY 231
           LNLPAPEDD   +     VFSA  +L+DCHY
Sbjct: 256 LNLPAPEDDLRESKFQGIVFSATPALIDCHY 286

[Close]
BLAST of Carg00959 vs. TAIR10
Match: AT5G03510.1 (C2H2-type zinc finger family protein)

HSP 1 Score: 137.1 bits (344), Expect = 1.4e-32
Identity = 92/228 (40.35%), Postives = 116/228 (50.88%), Query Frame = 0 

Query: 50  DLANCLILLAQGRTGDCASVLVQHNQSLF----------------AYQCKTCDRCFPSFQ 109
           D+ANCLILL+QG     +   +   +  F                 YQCKTCD+ F SFQ
Sbjct: 72  DMANCLILLSQGHQAKSSDDHLSMQRMGFFSNKKPVASLGLGLDGVYQCKTCDKSFHSFQ 131

Query: 110 ALGGHRASHKKPKISNS-----------------LQTHDPQFHLSLQLSTGRPPASFAAG 169
           ALGGHRASHKKPK+  S                 ++       LSLQ+++       + G
Sbjct: 132 ALGGHRASHKKPKLGASVFKCVEKKTASASTVETVEAGAVGSFLSLQVTS-------SDG 191

Query: 170 DLVKSKVHECSICGAEFSSGQALGGHMRRHRALTSTASVPSRGAAATPQLQELMIK---K 229
                K HECSIC AEFSSGQALGGHMRRHR LT  A+  S    A             +
Sbjct: 192 SKKPEKTHECSICKAEFSSGQALGGHMRRHRGLTINANATSAIKTAIXXXXXXXXXXXIR 251

Query: 230 ERNVLELDLNLPAPEDDR----------HRTAVSVFSAAS-SLVDCHY 231
            +N L+LDLNLPAPED+R           +  + +F+AAS SL+DCH+
Sbjct: 252 PKNFLQLDLNLPAPEDERCCEKPKFAFASKDQILLFTAASNSLIDCHH 292

[Close]
BLAST of Carg00959 vs. TAIR10
Match: AT5G04390.1 (C2H2-type zinc finger family protein)

HSP 1 Score: 106.7 bits (265), Expect = 2.0e-23
Identity = 56/110 (50.91%), Postives = 65/110 (59.09%), Query Frame = 0 

Query: 78  FAYQCKTCDRCFPSFQALGGHRASHKKPKISNSLQTHDPQ-----------FHLSLQLST 137
           + YQCKTCDR FPSFQALGGHRASHKKPK ++     D +            H +  +  
Sbjct: 151 YVYQCKTCDRTFPSFQALGGHRASHKKPKAASFYSNLDLKKNTYANDAVSLVHTTTTVFK 210

Query: 138 GRPPASFAA-GDLVKSKVHECSICGAEFSSGQALGGHMRRHRALTSTASV 176
                S    G   K+KVHEC ICGAEF+SGQALGGHMRRHR      +V
Sbjct: 211 NNNSRSLVVYGKASKNKVHECGICGAEFTSGQALGGHMRRHRGAVVVPAV 260

[Close]
BLAST of Carg00959 vs. TAIR10
Match: AT3G10470.1 (C2H2-type zinc finger family protein)

HSP 1 Score: 106.3 bits (264), Expect = 2.6e-23
Identity = 58/103 (56.31%), Postives = 66/103 (64.08%), Query Frame = 0 

Query: 80  YQCKTCDRCFPSFQALGGHRASHKKPKISNSLQT-HDPQ---------FHLSLQLST--- 139
           YQCKTCDR FPSFQALGGHRASHKKPK +  L + HD +          HL+  L+T   
Sbjct: 182 YQCKTCDRTFPSFQALGGHRASHKKPKAAMGLHSNHDHKKSNYDDAVSLHLNNVLTTTPN 241

Query: 140 --GRPPASFAAGDLVKSKVHECSICGAEFSSGQALGGHMRRHR 168
                 +    G    +KVHEC ICGAEF+SGQALGGHMRRHR
Sbjct: 242 NNSNHRSLVVYGKGSNNKVHECGICGAEFTSGQALGGHMRRHR 284

[Close]
BLAST of Carg00959 vs. TAIR10
Match: AT3G60580.1 (C2H2-like zinc finger protein)

HSP 1 Score: 82.4 bits (202), Expect = 4.0e-16
Identity = 48/133 (36.09%), Postives = 69/133 (51.88%), Query Frame = 0 

Query: 80  YQCKTCDRCFPSFQALGGHRASHKKPKISNSLQTHDPQFHLSLQLSTGRPPASFAAGDLV 139
           Y+C+TC + F S+QALGGHRASHKK ++SN+              +  R    +    +V
Sbjct: 173 YKCETCGKVFKSYQALGGHRASHKKNRVSNN-------------KTEQRSETEYDNVVVV 232

Query: 140 KSKVHECSICGAEFSSGQALGGHMRRHRALTSTASVPSRGAAATPQLQELMIKKERNVLE 199
             ++HEC IC   F+SGQALGGH R H            G       Q+  + +  +V +
Sbjct: 233 AKRIHECPICLRVFASGQALGGHKRSH------------GVGNLSVNQQRRVHRNESVKQ 280

Query: 200 --LDLNLPAPEDD 211
             +DLNLPAP ++
Sbjct: 293 RMIDLNLPAPTEE 280

[Close]
BLAST of Carg00959 vs. Swiss-Prot
Match: sp|Q681X4|ZAT5_ARATH (Zinc finger protein ZAT5 OS=Arabidopsis thaliana OX=3702 GN=ZAT5 PE=2 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 6.2e-35
Identity = 92/211 (43.60%), Postives = 117/211 (55.45%), Query Frame = 0 

Query: 50  DLANCLILLAQG---------RTGDCASVLVQHNQSLFAYQCKTCDRCFPSFQALGGHRA 109
           D+A CLI+LA+G          +      +   N S + Y+CKTC+R F SFQALGGHRA
Sbjct: 76  DMAICLIMLARGTVLPSPDLKNSRKIHQKISSENSSFYVYECKTCNRTFSSFQALGGHRA 135

Query: 110 SHKKPKISNSLQTHDPQFHLSLQLS----------TGRPPASFAAGDLVK-SKVHECSIC 169
           SHKKP+ S   +T  P        S          +G   AS A+  + K +KVHECSIC
Sbjct: 136 SHKKPRTSTEEKTRLPLTQPKSSASEEGQNSHFKVSGSALASQASNIINKANKVHECSIC 195

Query: 170 GAEFSSGQALGGHMRRHRALTSTASVPSRGAAATPQLQELMI--------KKERNVLELD 229
           G+EF+SGQALGGHMRRHR   +T S  +  A  +    E  I        +++R  L LD
Sbjct: 196 GSEFTSGQALGGHMRRHRTAVTTISPVAATAEVSRNSTEEEIEINIGRSMEQQRKYLPLD 255

Query: 230 LNLPAPEDDRHRTAVS--VFSAASSLVDCHY 231
           LNLPAPEDD   +     VFSA  +L+DCHY
Sbjct: 256 LNLPAPEDDLRESKFQGIVFSATPALIDCHY 286

[Close]
BLAST of Carg00959 vs. Swiss-Prot
Match: sp|Q9M202|ZAT9_ARATH (Zinc finger protein ZAT9 OS=Arabidopsis thaliana OX=3702 GN=ZAT9 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 7.1e-15
Identity = 48/133 (36.09%), Postives = 69/133 (51.88%), Query Frame = 0 

Query: 80  YQCKTCDRCFPSFQALGGHRASHKKPKISNSLQTHDPQFHLSLQLSTGRPPASFAAGDLV 139
           Y+C+TC + F S+QALGGHRASHKK ++SN+              +  R    +    +V
Sbjct: 173 YKCETCGKVFKSYQALGGHRASHKKNRVSNN-------------KTEQRSETEYDNVVVV 232

Query: 140 KSKVHECSICGAEFSSGQALGGHMRRHRALTSTASVPSRGAAATPQLQELMIKKERNVLE 199
             ++HEC IC   F+SGQALGGH R H            G       Q+  + +  +V +
Sbjct: 233 AKRIHECPICLRVFASGQALGGHKRSH------------GVGNLSVNQQRRVHRNESVKQ 280

Query: 200 --LDLNLPAPEDD 211
             +DLNLPAP ++
Sbjct: 293 RMIDLNLPAPTEE 280

[Close]
BLAST of Carg00959 vs. Swiss-Prot
Match: sp|Q9SSW1|AZF1_ARATH (Zinc finger protein AZF1 OS=Arabidopsis thaliana OX=3702 GN=AZF1 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.9e-12
Identity = 54/178 (30.34%), Postives = 76/178 (42.70%), Query Frame = 0 

Query: 3   ETPDENQAQFMKGKRTKRTRPXXXXXXXXXXXXXXXXXXXXXXXXXXDLANCLILLAQGR 62
           E   EN  Q+ K KRTKR R                            LA CL++LA+G 
Sbjct: 24  EMEPENLEQWAKRKRTKRQR--------FDHGHQNQETNKNLPSEEEYLALCLLMLARGS 83

Query: 63  TGDCASV----LVQHNQSLFAYQCKTCDRCFPSFQALGGHRASHKKP----------KIS 122
                 +               +C  C + F S+QALGGH+ SH+KP          ++S
Sbjct: 84  AVQSPPLXXXXXXXXXXXXXXXKCTVCGKSFSSYQALGGHKTSHRKPTNTSITSGNQELS 143

Query: 123 NSLQTHDPQFHLSLQLSTGRPPASFAAGDLVKSKVHECSICGAEFSSGQALGGHMRRH 167
           N+  ++     +++ ++TG        G     K+H CSIC   F+SGQALGGH R H
Sbjct: 144 NNSHSNSGSVVINVTVNTGN-------GVSQSGKIHTCSICFKSFASGQALGGHKRCH 186

[Close]
BLAST of Carg00959 vs. Swiss-Prot
Match: sp|Q9SSW2|AZF2_ARATH (Zinc finger protein AZF2 OS=Arabidopsis thaliana OX=3702 GN=AZF2 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.9e-12
Identity = 40/92 (43.48%), Postives = 50/92 (54.35%), Query Frame = 0 

Query: 80  YQCKTCDRCFPSFQALGGHRASHK-KPKISNSLQTHDPQFHLSLQLSTGRPPASFAAGD- 139
           Y+C  C++ FPS+QALGGH+ASH+ KP    S    D          +  P  S  AG+ 
Sbjct: 106 YKCNVCEKAFPSYQALGGHKASHRIKPPTVISTTADD----------STAPTISIVAGEK 165

Query: 140 ---LVKSKVHECSICGAEFSSGQALGGHMRRH 167
                  K+HECSIC   F +GQALGGH R H
Sbjct: 166 HPIAASGKIHECSICHKVFPTGQALGGHKRCH 187

[Close]
BLAST of Carg00959 vs. Swiss-Prot
Match: sp|O65499|ZAT3_ARATH (Zinc finger protein ZAT3 OS=Arabidopsis thaliana OX=3702 GN=ZAT3 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 7.4e-12
Identity = 46/119 (38.66%), Postives = 65/119 (54.62%), Query Frame = 0 

Query: 50  DLANCLILLAQGRTGDCASVLVQHNQSLFAYQCKTCDRCFPSFQALGGHRASHKKPK--I 109
           ++A+CL++L+ G            + S+  ++C  C + F S QALGGHRASHK  K   
Sbjct: 141 EVASCLLMLSNG---------TPSSSSIERFECGGCKKVFGSHQALGGHRASHKNVKGCF 200

Query: 110 SNSLQTHDPQFHLSLQLSTGRPPASFAAGDLVKSKVHECSICGAEFSSGQALGGHMRRH 167
           + +  T DP   +++  S+G          L  S  H+C+IC   FSSGQALGGHMR H
Sbjct: 201 AITNVTDDP---MTVSTSSGH---DHQGKILTFSGHHKCNICFRVFSSGQALGGHMRCH 244

[Close]
BLAST of Carg00959 vs. TrEMBL
Match: tr|A0A0A0LDR8|A0A0A0LDR8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G743410 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 9.2e-60
Identity = 169/264 (64.02%), Postives = 177/264 (67.05%), Query Frame = 0 

Query: 1   MAETPDENQAQFMKGKRTKRTRP-XXXXXXXXXXXXXXXXXXXXXXXXXXDLANCLILLA 60
           MAETPDENQAQ +KGKRTKR RP  XXXXXXXXXXXXXXXXXXXXXXXXX LANCLILLA
Sbjct: 1   MAETPDENQAQIIKGKRTKRLRPSSXXXXXXXXXXXXXXXXXXXXXXXXXXLANCLILLA 60

Query: 61  QGR---TGDCASVLVQH-----NQSLFAYQCKTCDRCFPSFQALGGHRASHKKPKISN-- 120
           QGR   T  C+SV VQ      N+SLF YQCKTCDRCFPSFQALGGHRASHKKPK  N  
Sbjct: 61  QGRSRITEGCSSVFVQQKLVAANESLFLYQCKTCDRCFPSFQALGGHRASHKKPKFFNXX 120

Query: 121 -----------------------SLQTHDPQFHLSLQLSTGRPPASFAAGDLVKSKVHEC 180
                                                           AGDL+KSKVHEC
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDLIKSKVHEC 180

Query: 181 SICGAEFSSGQALGGHMRRHRALTSTASVPSRGAAATPQLQELMIKKERNVLELDLNLPA 231
           SICGAEFSSGQALGGHMRRHRALT+T + P      TPQ     IKKERN+LELDLNLPA
Sbjct: 181 SICGAEFSSGQALGGHMRRHRALTATTTRP---ITTTPQ----FIKKERNMLELDLNLPA 240

[Close]
BLAST of Carg00959 vs. TrEMBL
Match: tr|A0A1S3B5W6|A0A1S3B5W6_CUCME (zinc finger protein ZAT5-like OS=Cucumis melo OX=3656 GN=LOC103486519 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.1e-59
Identity = 166/255 (65.10%), Postives = 176/255 (69.02%), Query Frame = 0 

Query: 1   MAETPDENQAQFMKGKRTKRTRP-XXXXXXXXXXXXXXXXXXXXXXXXXXDLANCLILLA 60
           MAETPDENQAQ +KGKRTKR RP  XXXXXXXXXXXXXXXXXXXXXXXXX LANCLILLA
Sbjct: 1   MAETPDENQAQIIKGKRTKRLRPSSXXXXXXXXXXXXXXXXXXXXXXXXXXLANCLILLA 60

Query: 61  QGR---TGDCASVLVQH-----NQSLFAYQCKTCDRCFPSFQALGGHRASHKKPKI---- 120
           QGR   T  C+SV V+      N+SLF YQCKTCDRCFPSFQALGGHRASHKKPK     
Sbjct: 61  QGRSRITEGCSSVFVEQKLVAANESLFLYQCKTCDRCFPSFQALGGHRASHKKPKFXXXX 120

Query: 121 ------------SNSLQTHDPQFHLSLQLSTGRPPASFAAGDLVKSKVHECSICGAEFSS 180
                                                  AGDL+KSKVHECSICGAEFSS
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDLIKSKVHECSICGAEFSS 180

Query: 181 GQALGGHMRRHRALTSTASVPSRGAAATPQLQELMIKKERNVLELDLNLPAPEDDRHRTA 231
           GQALGGHMRRHR LT+T + P     +TPQ     IKKERN+LELDLNLPAPEDDRHR  
Sbjct: 181 GQALGGHMRRHRTLTATTTRPI--TTSTPQ----FIKKERNMLELDLNLPAPEDDRHRPP 240

[Close]
BLAST of Carg00959 vs. TrEMBL
Match: tr|A0A2H5QKA6|A0A2H5QKA6_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_238240 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.4e-44
Identity = 107/220 (48.64%), Postives = 132/220 (60.00%), Query Frame = 0 

Query: 50  DLANCLILLAQGRTGDCASVLVQH--------------NQSLFAYQCKTCDRCFPSFQAL 109
           D+ANCLILLAQG     +S    H                 L+ +QCKTC+RCFPSFQAL
Sbjct: 82  DMANCLILLAQGDAKKISSSSSSHPLDQPATTSKAAAVATGLYVHQCKTCNRCFPSFQAL 141

Query: 110 GGHRASHKKPKISNS------------LQTHDPQFH-----LSLQLSTGRPPASFAAGDL 169
           GGHRASHKKPK+ N+            +   D +F      LSLQ++  R  A+  A   
Sbjct: 142 GGHRASHKKPKVINNNNIEASKKAFVLMDKEDDRFSNMSTTLSLQMANNRDAANLCARTN 201

Query: 170 VK-SKVHECSICGAEFSSGQALGGHMRRHRALTSTASVPSRGAAATPQLQELMIKKERNV 229
            K +KVHECSICGAEFSSGQALGGHMRRHRA T++ +  S G +++   Q    KK RN+
Sbjct: 202 NKANKVHECSICGAEFSSGQALGGHMRRHRAFTTSTTALSMGTSSSLDRQSQQAKKPRNI 261

Query: 230 LELDLNLPAPEDDRHRTAVS-------VFSAASSLVDCHY 231
           L+LDLNLPAPEDDRH +  +       +  +AS LVDCHY
Sbjct: 262 LQLDLNLPAPEDDRHESKFAFASKEQVIIFSASPLVDCHY 301

[Close]
BLAST of Carg00959 vs. TrEMBL
Match: tr|A0A061ET06|A0A061ET06_THECC (Nucleic acid binding protein, putative OS=Theobroma cacao OX=3641 GN=TCM_022299 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 7.8e-43
Identity = 108/209 (51.67%), Postives = 132/209 (63.16%), Query Frame = 0 

Query: 50  DLANCLILLAQGRT----GDCASVLVQHNQSLFAYQCKTCDRCFPSFQALGGHRASHKKP 109
           D+ANCLILLAQG+T     + AS+       ++ +QCKTC+RCF SFQALGGHRASHKKP
Sbjct: 87  DMANCLILLAQGQTRIKPSEPASLATTSKTGIYVHQCKTCNRCFSSFQALGGHRASHKKP 146

Query: 110 KISNS-------LQTHDPQFH-----LSLQLSTGRPPASFAAGDLVKSKVHECSICGAEF 169
           K++N        ++  D QF+     LSLQ++      + +     KSKVHECSICGAEF
Sbjct: 147 KVNNEENKGLVFVREDDDQFNNMNTALSLQITNKAVLCNSS-----KSKVHECSICGAEF 206

Query: 170 SSGQALGGHMRRHRAL----TSTASVPSRGAAATPQLQELMIKKERNVLELDLNLPAPED 229
           SSGQALGGHMRRHR      T+TA+        +P+ QE   KK R VL+LDLNLPAPED
Sbjct: 207 SSGQALGGHMRRHRTFTNVPTTTATTALSVGTRSPESQE--SKKPRTVLQLDLNLPAPED 266

Query: 230 DRHRTAVSVFS--------AASSLVDCHY 231
           D HR     F+        +ASSLVDCHY
Sbjct: 267 DHHRETKFSFASKEKLLVFSASSLVDCHY 288

[Close]
BLAST of Carg00959 vs. TrEMBL
Match: tr|A0A067DQV6|A0A067DQV6_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g036604mg PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 7.3e-41
Identity = 94/178 (52.81%), Postives = 117/178 (65.73%), Query Frame = 0 

Query: 77  LFAYQCKTCDRCFPSFQALGGHRASHKKPKISNS-----------LQTHDPQFH-----L 136
           L+ YQCKTC+RCFPSFQALGGHRASHKKPK+ N+           +   D +F      L
Sbjct: 80  LYVYQCKTCNRCFPSFQALGGHRASHKKPKVINNNIEASKKAFVLMDEEDDRFSNMSTTL 139

Query: 137 SLQLSTGRPPASFAAGDLVK-SKVHECSICGAEFSSGQALGGHMRRHRALTSTASVPSRG 196
           SLQ++  R  A+  A    K +KVHECSICGAEFSSGQALGGHMRRHRA T++ +  + G
Sbjct: 140 SLQMANNRDAANLCARTNNKANKVHECSICGAEFSSGQALGGHMRRHRAFTTSTTALTMG 199

Query: 197 AAATPQLQELMIKKERNVLELDLNLPAPEDDRHRTAVS-------VFSAASSLVDCHY 231
            +++   Q    KK RN+L+LDLNLPAPEDDRH +  +       +  +AS LVDCHY
Sbjct: 200 TSSSLDRQSQQAKKPRNILQLDLNLPAPEDDRHESKFAFASKEQVIIFSASPLVDCHY 257

The following BLAST results are available for this feature:
BLAST of Carg00959 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022936966.19.5e-10999.57zinc finger protein ZAT5-like [Cucurbita moschata][more]
XP_023540997.18.9e-10797.83zinc finger protein ZAT5-like [Cucurbita pepo subsp. pepo][more]
XP_023005952.11.2e-10697.83zinc finger protein ZAT5-like [Cucurbita maxima][more]
XP_022934069.11.6e-6369.53zinc finger protein ZAT5-like [Cucurbita moschata][more]
XP_011652845.11.4e-5964.02PREDICTED: zinc finger protein ZAT5-like [Cucumis sativus] >KGN59004.1 hypotheti... [more]
BLAST of Carg00959 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G28200.13.4e-3643.60C2H2-type zinc finger family protein[more]
AT5G03510.11.4e-3240.35C2H2-type zinc finger family protein[more]
AT5G04390.12.0e-2350.91C2H2-type zinc finger family protein[more]
AT3G10470.12.6e-2356.31C2H2-type zinc finger family protein[more]
AT3G60580.14.0e-1636.09C2H2-like zinc finger protein[more]
BLAST of Carg00959 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q681X4|ZAT5_ARATH6.2e-3543.60Zinc finger protein ZAT5 OS=Arabidopsis thaliana OX=3702 GN=ZAT5 PE=2 SV=1[more]
sp|Q9M202|ZAT9_ARATH7.1e-1536.09Zinc finger protein ZAT9 OS=Arabidopsis thaliana OX=3702 GN=ZAT9 PE=2 SV=1[more]
sp|Q9SSW1|AZF1_ARATH1.9e-1230.34Zinc finger protein AZF1 OS=Arabidopsis thaliana OX=3702 GN=AZF1 PE=2 SV=1[more]
sp|Q9SSW2|AZF2_ARATH1.9e-1243.48Zinc finger protein AZF2 OS=Arabidopsis thaliana OX=3702 GN=AZF2 PE=2 SV=1[more]
sp|O65499|ZAT3_ARATH7.4e-1238.66Zinc finger protein ZAT3 OS=Arabidopsis thaliana OX=3702 GN=ZAT3 PE=1 SV=1[more]
BLAST of Carg00959 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LDR8|A0A0A0LDR8_CUCSA9.2e-6064.02Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G743410 PE=4 SV=1[more]
tr|A0A1S3B5W6|A0A1S3B5W6_CUCME2.1e-5965.10zinc finger protein ZAT5-like OS=Cucumis melo OX=3656 GN=LOC103486519 PE=4 SV=1[more]
tr|A0A2H5QKA6|A0A2H5QKA6_CITUN2.4e-4448.64Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_238240 PE=4 SV=1[more]
tr|A0A061ET06|A0A061ET06_THECC7.8e-4351.67Nucleic acid binding protein, putative OS=Theobroma cacao OX=3641 GN=TCM_022299 ... [more]
tr|A0A067DQV6|A0A067DQV6_CITSI7.3e-4152.81Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g036604mg PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR036236Znf_C2H2_sf
IPR013087Znf_C2H2_type
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg00959-RACarg00959-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 80..102
e-value: 0.077
score: 22.1
coord: 144..166
e-value: 0.01
score: 25.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 146..166
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 82..102
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 144..171
score: 9.889
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 80..107
score: 9.972
NoneNo IPR availablePFAMPF13912zf-C2H2_6coord: 79..104
e-value: 2.9E-10
score: 39.7
coord: 143..168
e-value: 3.3E-13
score: 49.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..42
NoneNo IPR availablePANTHERPTHR26374:SF329SUBFAMILY NOT NAMEDcoord: 6..63
NoneNo IPR availablePANTHERPTHR26374FAMILY NOT NAMEDcoord: 6..63
coord: 77..112
NoneNo IPR availablePANTHERPTHR26374:SF329SUBFAMILY NOT NAMEDcoord: 77..112
coord: 133..221
NoneNo IPR availablePANTHERPTHR26374FAMILY NOT NAMEDcoord: 133..221
IPR036236Zinc finger C2H2 superfamilySUPERFAMILYSSF57667beta-beta-alpha zinc fingerscoord: 80..102
coord: 139..166

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg00959Cla008697Watermelon (97103) v1carwmB0152
Carg00959Cla017782Watermelon (97103) v1carwmB0146
Carg00959Csa3G743410Cucumber (Chinese Long) v2carcuB0175
Carg00959MELO3C009378Melon (DHL92) v3.5.1carmeB0161
Carg00959ClCG02G021630Watermelon (Charleston Gray)carwcgB0152
Carg00959ClCG10G019900Watermelon (Charleston Gray)carwcgB0147
Carg00959CSPI06G11960Wild cucumber (PI 183967)carcpiB0188
Carg00959CSPI03G33590Wild cucumber (PI 183967)carcpiB0181
Carg00959Cucsa.385670Cucumber (Gy14) v1carcgyB0202
Carg00959Cucsa.306530Cucumber (Gy14) v1carcgyB0196
Carg00959CmaCh14G002350Cucurbita maxima (Rimu)carcmaB0203
Carg00959CmoCh06G003960Cucurbita moschata (Rifu)carcmoB0227
Carg00959CmoCh14G002260Cucurbita moschata (Rifu)carcmoB0214
Carg00959Lsi03G019880Bottle gourd (USVL1VR-Ls)carlsiB141
Carg00959Cp4.1LG03g01500Cucurbita pepo (Zucchini)carcpeB0230
Carg00959CsGy3G031410Cucumber (Gy14) v2carcgybB0170
Carg00959MELO3C009378.2Melon (DHL92) v3.6.1carmedB0162
Carg00959CsaV3_6G014410Cucumber (Chinese Long) v3carcucB0189
Carg00959CsaV3_3G036200Cucumber (Chinese Long) v3carcucB0181
Carg00959Cla97C10G203050Watermelon (97103) v2carwmbB0159
Carg00959Cla97C02G047690Watermelon (97103) v2carwmbB0164
Carg00959Bhi11G001742Wax gourdcarwgoB0196
Carg00959Bhi10G000100Wax gourdcarwgoB0207
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg00959Carg03741Silver-seed gourdcarcarB180
Carg00959Carg02439Silver-seed gourdcarcarB184
Carg00959Carg03199Silver-seed gourdcarcarB187
Carg00959Carg02594Silver-seed gourdcarcarB198
The following block(s) are covering this gene:
GeneOrganismBlock
Carg00959Cucurbita maxima (Rimu)carcmaB0216
Carg00959Cucurbita maxima (Rimu)carcmaB0217
Carg00959Cucurbita moschata (Rifu)carcmoB0228
Carg00959Cucurbita pepo (Zucchini)carcpeB0227
Carg00959Cucurbita pepo (Zucchini)carcpeB0233
Carg00959Cucumber (Chinese Long) v2carcuB0181
Carg00959Bottle gourd (USVL1VR-Ls)carlsiB138
Carg00959Melon (DHL92) v3.5.1carmeB0158
Carg00959Watermelon (97103) v1carwmB0151
Carg00959Wax gourdcarwgoB0209