CsaV3_3G031910 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G031910
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	protein BPS1, chloroplastic-like
Location	chr3 : 27588971 .. 27592977 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGAAATGGATGAAGAAGAAAAGGAGAGAAAGGATCAAAGCCCTTTCATATATATAGTAATAATACTTAAAAAAACAAAGGCATTTTAGTAATGGCATGATGCATTTTACTATGTTCACTTGAACTCGGAAAGAATGAACTTCACAAGAATGATGGAAAGGATTTCGGCCGAGATTGTCCGAGAAGAGTAAAATTACGCGTTTTCAAAAAGTACGCTATTCGTGAATCATACGTAATCTTTTGGTGCCTTTCTTCTCGTGATTCATCTCACGCAAGCTTCCCAGTTCTTCAAATTCATATATTGGATAACCCCAATTGACCGTTGATTCCATTGCCATTCAACGAAACCCCCAAAATTTCTTCCCTACCTCTAGAGATCGTTTAATTCAATCACAAGCTTCTGTTCTTGCTCTGTTCATGATCATTTAGGGTAATACCCAATTCATAATTTCTTCTCCAATCTGGAAAATCATCGCCACCATCATGAGTCGGAAGTGGGTTCGGCAGCGTTTCAGGGATTTCTCTCACAAATCTCGATTCGTTTGAACGATGTGGGGTTTGATTTGAGTAAACCCACATCGGAAATCTTCTCGTTTTCGTTCATTAACCGGTGCTTCGAATTGCTTCGTGTTCAACACAGAGCGTTTGCGAAGTTGCTTCTGGAAATTGACTACCCAGTTCGGAAACATGAGGGTCCATCAGGGGATGAGTTTCTTAAATACACATTGAAATTGCTTGATCTTTTGAATTCGATTACTTCGTGTATTGCTCATCTGGGACAAGCTCGGTTGAAACTTTCTCATGCTTTGAGCTTGGTGGAGGATTCTCCTTCCTCTGCTATTGATCGTTTAAAGCCTATAGGAACAAGCAGTTTCAGCAAGGAGCCGATTAAGGAAGGTGAAAATGTAGAGATTTGTGTGGAAGTTGAGAAATCTGAAAAAAAATTAGTGGTTCATCGTGCTTTGATGATTATGAAACAGATTGGTTTGTGGGTTTGTGGGATTGTGATTTCTGGATTGAGTGGAGATGCTGAGGCATTCTTGGAAATGAGAAAATCATATGATGAATTTGGGGTATCTGGTTTAGATAGGTTGGATTTTATTGTTCATAAAGCAATTTGTGAATCTGGGGTGAGGTTGAAGGAAATTAAAGAGGTGAATGATGCAGTTGAGCTTCTTGTTGCTTCCGTGGCGGCTGGGAAAAGCAGTGATGCAGCTCAGAATTTGCATAAAAGATTAGAGGTTCTTGAGAAGGAGGTAGATGATTTGAGGAAGGAAGTTGATTCTCTATTCTCTGATGTTTTGGAAGAGAGAACCAAACTGCTTGATTGCTTTAGACTGAGAAATCAATAACCAAACTGCTTGATTGCTTTAGACTGAGAAATCAATAGCCATGGTTGGATTGTTTCTACTTTTTTTAACATATTGAATTGTGATTATGAGTTATGATGTATAAACTTTACTGTTTAATTGCAATATAAATAATACAAGTTTACGGTTGATTACCTTCTTTCTGGAAACTGAAAAACAAGAAAAATAGAGATATCAAGAGAGAGGACATCTTAGAACTCAATACACATTGAAACTTTTAGATTGGCATTTCAAATTTGATTCAGCCATAGAAGTAAGGCAGAAAAAATTACAGATTCAGCTAACAAATAGCCTAGAAAGAATAGCTAATATTCCTTCTTTAGGCAGAGCTACACGTGAAGGGGACTAGAGTTCGTAAATTTCTTAACAAATGACTCCCAAATCTATTAAAACTAACTACAACAATGCCATTTCATGACTAATCTCATCTGCTACATGAAGATTTCTAATTCTCTCTGTTTCAATGGTTTCAAAGTCACCTAATGAATATTTGCAGTTTCTGAAGGTGGAGATGAAACTGGTTTTCACTGTTCGTCTCGTCAGTGTCTGTGCAGTCCATTCTAATTAATCAGAATGAATGAGAGAGAGATCATAATATGCCCATTTGAGCCCCTGAATCATTTGAATGAGTATCTCTCTCACTCTCCTTTCTCTTGCAATAAACATGAGATGGCAGCCTGAGCAACAGGGAGGATGAATTTAGAAACATTACCAATCATACAATGGAAGGAAGATTGCAAGAGCAGAGTTGTTGCCAATTTCATGTTATCTTTTCAGTAGCAGAGAAGACAGGGAATTGTTGAGAAGAACAAACCATTTTCTCACTATGTCATAATATTGAACTAGAGAAGAATTAAATGCAGGTAGGACTAAAACAAATTCATTACGCAGTTAAAAAGCAAGACATTACCCCAAGTGCAAGGTGGTGTCTGAATCTCCTCTTTCAATTTCAGAGTTGCAGGCCATATCAGGGCTTCTAATGCCAATATTCTTTTGCTCTAGGGAGCAGTATTCAAGATAAGCTGGAAGGGGGCAATCAACCGGCGGAAACAGACACCGAAGCTCATTGACCTACAATGCATGGTGCGGTAAAATTATAAAAACTTGTGTCTTAGTAAATATATAATGATTCTTAGGTTAGATCAACACATCTCCTTGCCTGTCTCCGCAGAGTTTCGTTCTCAAGCATTGCTCGTTGTTCCTGAAACAAAAATGTGAACATGAGTCATCTCATTCCCTGTTTCCTAGAGATTTCTAGCTAGCATGGATGAAATAGCCTGACCATGCCATAACTTGTGAATAATCTACAATTTTCTTCTCATAACTACTGTCTGATTGCAGTTTTGTGTTCCCACCACTATCGTTATTAGGTTTAAGTAGGGTTTCAACGGTAGGATCTGTTTTAGAAGGTCAACTTTATATAAAAATCCATGGTTTGTTATCTTCGCATTATCATTGTGCATTTAGCAGAAATTTTGCTTGCGCCTTGTGAAATTGGGTTATAAGTCGGGTAGTTGAGTCTATTAACAAAGGGCAAATTTGACCAAAGAAAAACTAACTTCTACACGCATAGATATCAAAGTAAAGTAGTTATGTTTTGAATTCATTATTATTTGCATAGTGGAGGCAGGGCACGGGGAGCACCCGTCATTGTCATCAAAAGCACTAATAATGATAACCACTTGAGTTATTTGACCATCAAAACGTGAATTATCATGTTCTAAGCTATTGTGTTATGGATCATAACAACAAACTGAATACGAAAACATTGGTTTAGCATGTTGTTCACCAAAGTTCTCTCTCTGAGGTTCCATTTTTTCAAGGATTAAAACTCATTTAAATATCAAAATTTGAAAGCATATGTCCTATACAGATGGCACAAAATATATTAAGTCACCTGTACCCTTGATTGCTCTAGTTGCTCCATCAGTAACTGTTCCTAAAGAAATAAAAGGTTCATCAAGATTTGAAAGTACAATTAATCTTTTGAAGTTCCATGTTACAGAAAATCACTTTTATACTTTAGGAAGATAAAGGTAAAGGGATGGTCAAACCCAAACCTTCTTCTCTTTCACCAGTAATAGCCCTTCATTTAGCTGTTGCTCCAGGTTTTGCAACTCTTTGAAGCCTAAGCCAGTGAGATCCTTTCCCAATAGCTGTCTGCACAGGAAAAAAAATGATAAGTACATATAAAAGATGCAACTTCACTTTAAAGATCATGCGCCAAGTAGGATGGCATACAATTGTTTCATTTGCAGAGTTGTTATTTCCTCTCGTAGAATGTCTACCTCCTCATGCTCTCGCTGCCGGGGGGGGGGGGGAGAGATACTGTTAGAAAGAATAATGCATTGTTTCTTCCGAGAACATTTAAGTAAACAAACAACCAAGCAGTTATAACCCGTAACAATAGTGTCAAGTAGAAATATTTCCGTACTCCTTATCAACCTTGTTTTGTAAAATTGTGATGAAAATATAATAGTTTTGAGGTATCAACCTTATCTAAATGACATAAATGTTAAATGTTAAAGTTACACGTTGAGTTTCTACACTTTAAAATTTGTGTTAGACAAGTCCCTCAACTTAAAAGGTGTCCAATTAGTCTCACAACTTACAATTTTCTATCTATTAAGTTTTTT

mRNA sequence

ATGATTATGAAACAGATTGGTTTGTGGGTTTGTGGGATTGTGATTTCTGGATTGAGTGGAGATGCTGAGGCATTCTTGGAAATGAGAAAATCATATGATGAATTTGGGGTATCTGGTTTAGATAGGTTGGATTTTATTGTTCATAAAGCAATTTGTGAATCTGGGGTGAGGTTGAAGGAAATTAAAGAGGTGAATGATGCAGTTGAGCTTCTTGTTGCTTCCGTGGCGGCTGGGAAAAGCAGTGATGCAGCTCAGAATTTGCATAAAAGATTAGAGGTTCTTGAGAAGGAGGTAGATGATTTGAGGAAGGAAGTTGATTCTCTATTCTCTGATGTTTTGGAAGAGAGAACCAAACTGCTTGATTGCTTTAGACTGAGAAATCAATAA

Coding sequence (CDS)

ATGATTATGAAACAGATTGGTTTGTGGGTTTGTGGGATTGTGATTTCTGGATTGAGTGGAGATGCTGAGGCATTCTTGGAAATGAGAAAATCATATGATGAATTTGGGGTATCTGGTTTAGATAGGTTGGATTTTATTGTTCATAAAGCAATTTGTGAATCTGGGGTGAGGTTGAAGGAAATTAAAGAGGTGAATGATGCAGTTGAGCTTCTTGTTGCTTCCGTGGCGGCTGGGAAAAGCAGTGATGCAGCTCAGAATTTGCATAAAAGATTAGAGGTTCTTGAGAAGGAGGTAGATGATTTGAGGAAGGAAGTTGATTCTCTATTCTCTGATGTTTTGGAAGAGAGAACCAAACTGCTTGATTGCTTTAGACTGAGAAATCAATAA

Protein sequence

MIMKQIGLWVCGIVISGLSGDAEAFLEMRKSYDEFGVSGLDRLDFIVHKAICESGVRLKEIKEVNDAVELLVASVAAGKSSDAAQNLHKRLEVLEKEVDDLRKEVDSLFSDVLEERTKLLDCFRLRNQ

Homology

[Close]

BLAST of CsaV3_3G031910 vs. NCBI nr
Match: KGN58567.1 (hypothetical protein Csa_3G686210 [Cucumis sativus])

HSP 1 Score: 201.4 bits (511), Expect = 1.8e-48
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MIMKQIGLWVCGIVISGLSGDAEAFLEMRKSYDEFGVSGLDRLDFIVHKAICESGVRLKE 60
           MIMKQIGLWVCGIVISGLSGDAEAFLEMRKSYDEFGVSGLDRLDFIVHKAICESGVRLKE
Sbjct: 165 MIMKQIGLWVCGIVISGLSGDAEAFLEMRKSYDEFGVSGLDRLDFIVHKAICESGVRLKE 224

Query: 61  IKEVNDAVELLVASVAAGKSSDAAQNLHKRXXXXXXXXXXXXXXXXXXXXXXLEERTKLL 120
           IKEVNDAVELLVASVAAGKSSDAAQNLHKRXXXXXXXXXXXXXXXXXXXXXXLEERTKLL
Sbjct: 225 IKEVNDAVELLVASVAAGKSSDAAQNLHKRXXXXXXXXXXXXXXXXXXXXXXLEERTKLL 284

Query: 121 DCFRLRNQ 129
           DCFRLRNQ
Sbjct: 285 DCFRLRNQ 292

[Close]

BLAST of CsaV3_3G031910 vs. NCBI nr
Match: XP_022152601.1 (uncharacterized protein LOC111020287 [Momordica charantia])

HSP 1 Score: 137.9 bits (346), Expect = 2.5e-29
Identity = 96/128 (75.00%), Postives = 109/128 (85.16%), Query Frame = 0


Query: 1   MIMKQIGLWVCGIVISGLSGDAEAFLEMRKSYDEFGVSGLDRLDFIVHKAICESGVRLKE 60
           MIM+QI LWVCGIVISGLSG+AE  + +RKS  + GVS L+RLD IVH+ ICESGVRLKE
Sbjct: 182 MIMQQISLWVCGIVISGLSGNAEPLMGLRKSAGKLGVSSLNRLDSIVHQEICESGVRLKE 241

Query: 61  IKEVNDAVELLVASVAAGKSSDAAQNLHKRXXXXXXXXXXXXXXXXXXXXXXLEERTKLL 120
           +KE NDAVELLVAS+AAGK+ DAA++L   XXXXXXXXXXXXXXXXXXXXXX EER+KLL
Sbjct: 242 VKEANDAVELLVASMAAGKTRDAAEDLQXXXXXXXXXXXXXXXXXXXXXXXXXEERSKLL 301

Query: 121 DCFRLRNQ 129
           DC R  NQ
Sbjct: 302 DCLRQINQ 309

[Close]

BLAST of CsaV3_3G031910 vs. NCBI nr
Match: XP_018844458.1 (PREDICTED: protein BPS1, chloroplastic-like [Juglans regia])

HSP 1 Score: 94.0 bits (232), Expect = 4.1e-16
Identity = 50/122 (40.98%), Postives = 68/122 (55.74%), Query Frame = 0


Query: 3   MKQIGLWVCGIVISGLSGDAEAFLEMRKSYDEFGVSGLDRLDFIVHKAICESGVRLKEIK 62
           MK IG WVCGIV++GL  D + +LEMRKS      S    LD  +++ I E G  LKEIK
Sbjct: 187 MKSIGFWVCGIVLTGLCSDGKPYLEMRKSVGGLVFSSFVELDSSLYEIIMEKGAILKEIK 246

Query: 63  EVNDAVELLVASVAAGKSSDAAQNLHKRXXXXXXXXXXXXXXXXXXXXXXLEERTKLLDC 122
           E+NDAV+ L+A++A GK S+AA+ L  +                      L+ R K++DC
Sbjct: 247 ELNDAVDCLLAALATGKHSEAAEELQGKLEISEKLLEELQKEVDHLFSEVLDGRNKMVDC 306

Query: 123 FR 125
            R
Sbjct: 307 LR 308

[Close]

BLAST of CsaV3_3G031910 vs. NCBI nr
Match: XP_010659289.1 (PREDICTED: protein BPS1, chloroplastic-like [Vitis vinifera])

HSP 1 Score: 93.2 bits (230), Expect = 6.9e-16
Identity = 55/126 (43.65%), Postives = 68/126 (53.97%), Query Frame = 0


Query: 1   MIMKQIGLWVCGIVISGLSGDAEAFLEMRKSYDEFGVSGLDRLDFIVHKAICESGVRLKE 60
           M MK IG WVCGIV+SGLSGDA+ +LEMRK  D    S L  LD  VH+ I E     KE
Sbjct: 185 MEMKSIGFWVCGIVLSGLSGDAQPYLEMRKLADSSANSSLKGLDAGVHEVIMERSSIPKE 244

Query: 61  IKEVNDAVELLVASVAAGKSSDAAQNLHKRXXXXXXXXXXXXXXXXXXXXXXLEERTKLL 120
           +KEVNDAV  L+ ++  GK ++AA+ L +R                      L  R +LL
Sbjct: 245 VKEVNDAVPCLLNAMVMGKGNNAAEELKRRLEVLEKTLDSVQKEVEDLFSEVLAGRNELL 304

Query: 121 DCFRLR 127
           D  R R
Sbjct: 305 DILRRR 310

[Close]

BLAST of CsaV3_3G031910 vs. NCBI nr
Match: XP_018815704.1 (PREDICTED: protein BPS1, chloroplastic-like [Juglans regia])

HSP 1 Score: 82.8 bits (203), Expect = 9.4e-13
Identity = 46/122 (37.70%), Postives = 63/122 (51.64%), Query Frame = 0


Query: 1   MIMKQIGLWVCGIVISGLSGDAEAFLEMRKSYDEFGVSGLDRLDFIVHKAICESGVRLKE 60
           +++K IG WVCGIV+SGLS D + +LEMRK       S    LD  + + + E G  LKE
Sbjct: 186 IVVKSIGFWVCGIVLSGLSSDGKPYLEMRKLVGGLVFSSFLELDSTICEIVMEKGTFLKE 245

Query: 61  IKEVNDAVELLVASVAAGKSSDAAQNLHKRXXXXXXXXXXXXXXXXXXXXXXLEERTKLL 120
           IKE++D V  LVA++  GK  +AA+ L +                       L  R KLL
Sbjct: 246 IKELDDTVTSLVAAIVNGKHIEAAEELQRELEVSEELLEGLHKDVDRLFYEVLAGRNKLL 305

Query: 121 DC 123
           +C
Sbjct: 306 NC 307

[Close]

BLAST of CsaV3_3G031910 vs. TrEMBL
Match: tr|A0A0A0LD05|A0A0A0LD05_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G686210 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.2e-48
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MIMKQIGLWVCGIVISGLSGDAEAFLEMRKSYDEFGVSGLDRLDFIVHKAICESGVRLKE 60
           MIMKQIGLWVCGIVISGLSGDAEAFLEMRKSYDEFGVSGLDRLDFIVHKAICESGVRLKE
Sbjct: 165 MIMKQIGLWVCGIVISGLSGDAEAFLEMRKSYDEFGVSGLDRLDFIVHKAICESGVRLKE 224

Query: 61  IKEVNDAVELLVASVAAGKSSDAAQNLHKRXXXXXXXXXXXXXXXXXXXXXXLEERTKLL 120
           IKEVNDAVELLVASVAAGKSSDAAQNLHKRXXXXXXXXXXXXXXXXXXXXXXLEERTKLL
Sbjct: 225 IKEVNDAVELLVASVAAGKSSDAAQNLHKRXXXXXXXXXXXXXXXXXXXXXXLEERTKLL 284

Query: 121 DCFRLRNQ 129
           DCFRLRNQ
Sbjct: 285 DCFRLRNQ 292

[Close]

BLAST of CsaV3_3G031910 vs. TrEMBL
Match: tr|A0A2I4GKN7|A0A2I4GKN7_9ROSI (protein BPS1, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC109008712 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.7e-16
Identity = 50/122 (40.98%), Postives = 68/122 (55.74%), Query Frame = 0


Query: 3   MKQIGLWVCGIVISGLSGDAEAFLEMRKSYDEFGVSGLDRLDFIVHKAICESGVRLKEIK 62
           MK IG WVCGIV++GL  D + +LEMRKS      S    LD  +++ I E G  LKEIK
Sbjct: 187 MKSIGFWVCGIVLTGLCSDGKPYLEMRKSVGGLVFSSFVELDSSLYEIIMEKGAILKEIK 246

Query: 63  EVNDAVELLVASVAAGKSSDAAQNLHKRXXXXXXXXXXXXXXXXXXXXXXLEERTKLLDC 122
           E+NDAV+ L+A++A GK S+AA+ L  +                      L+ R K++DC
Sbjct: 247 ELNDAVDCLLAALATGKHSEAAEELQGKLEISEKLLEELQKEVDHLFSEVLDGRNKMVDC 306

Query: 123 FR 125
            R
Sbjct: 307 LR 308

[Close]

BLAST of CsaV3_3G031910 vs. TrEMBL
Match: tr|F6HHW9|F6HHW9_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0158g00090 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.6e-16
Identity = 55/126 (43.65%), Postives = 68/126 (53.97%), Query Frame = 0


Query: 1   MIMKQIGLWVCGIVISGLSGDAEAFLEMRKSYDEFGVSGLDRLDFIVHKAICESGVRLKE 60
           M MK IG WVCGIV+SGLSGDA+ +LEMRK  D    S L  LD  VH+ I E     KE
Sbjct: 185 MEMKSIGFWVCGIVLSGLSGDAQPYLEMRKLADSSANSSLKGLDAGVHEVIMERSSIPKE 244

Query: 61  IKEVNDAVELLVASVAAGKSSDAAQNLHKRXXXXXXXXXXXXXXXXXXXXXXLEERTKLL 120
           +KEVNDAV  L+ ++  GK ++AA+ L +R                      L  R +LL
Sbjct: 245 VKEVNDAVPCLLNAMVMGKGNNAAEELKRRLEVLEKTLDSVQKEVEDLFSEVLAGRNELL 304

Query: 121 DCFRLR 127
           D  R R
Sbjct: 305 DILRRR 310

[Close]

BLAST of CsaV3_3G031910 vs. TrEMBL
Match: tr|A0A2N9J077|A0A2N9J077_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58080 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.2e-13
Identity = 46/124 (37.10%), Postives = 68/124 (54.84%), Query Frame = 0


Query: 1   MIMKQIGLWVCGIVISGLSGDAEAFLEMRKSYDEFGVSGLDRLDFIVHKAICESGVRLKE 60
           M+MK IG WVCGIV+SGL  D++ +LEMRK       S  D  D  + + + E+    K+
Sbjct: 180 MVMKSIGFWVCGIVLSGLCSDSKPYLEMRKLVCGLVNSSFDGFDSSICEVVMETNCVFKD 239

Query: 61  IKEVNDAVELLVASVAAGKSSDAAQNLHKRXXXXXXXXXXXXXXXXXXXXXXLEERTKLL 120
           +KE+NDAV  L A++  G++S+AA++L  +                      L+ R+KLL
Sbjct: 240 VKELNDAVACLNAALVNGENSEAAKDLKGKLEVFEKLLEGLQKEVDHLFSEVLDGRSKLL 299

Query: 121 DCFR 125
           DC R
Sbjct: 300 DCLR 303

[Close]

BLAST of CsaV3_3G031910 vs. TrEMBL
Match: tr|A0A2I4E8J1|A0A2I4E8J1_9ROSI (protein BPS1, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC108987265 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 6.2e-13
Identity = 46/122 (37.70%), Postives = 63/122 (51.64%), Query Frame = 0


Query: 1   MIMKQIGLWVCGIVISGLSGDAEAFLEMRKSYDEFGVSGLDRLDFIVHKAICESGVRLKE 60
           +++K IG WVCGIV+SGLS D + +LEMRK       S    LD  + + + E G  LKE
Sbjct: 186 IVVKSIGFWVCGIVLSGLSSDGKPYLEMRKLVGGLVFSSFLELDSTICEIVMEKGTFLKE 245

Query: 61  IKEVNDAVELLVASVAAGKSSDAAQNLHKRXXXXXXXXXXXXXXXXXXXXXXLEERTKLL 120
           IKE++D V  LVA++  GK  +AA+ L +                       L  R KLL
Sbjct: 246 IKELDDTVTSLVAAIVNGKHIEAAEELQRELEVSEELLEGLHKDVDRLFYEVLAGRNKLL 305

Query: 121 DC 123
           +C
Sbjct: 306 NC 307

The following BLAST results are available for this feature:

BLAST of CsaV3_3G031910 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN58567.1	1.8e-48	100.00	hypothetical protein Csa_3G686210 [Cucumis sativus]	[more]
XP_022152601.1	2.5e-29	75.00	uncharacterized protein LOC111020287 [Momordica charantia]	[more]
XP_018844458.1	4.1e-16	40.98	PREDICTED: protein BPS1, chloroplastic-like [Juglans regia]	[more]
XP_010659289.1	6.9e-16	43.65	PREDICTED: protein BPS1, chloroplastic-like [Vitis vinifera]	[more]
XP_018815704.1	9.4e-13	37.70	PREDICTED: protein BPS1, chloroplastic-like [Juglans regia]	[more]

BLAST of CsaV3_3G031910 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G031910 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G031910 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LD05\|A0A0A0LD05_CUCSA	1.2e-48	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G686210 PE=4 SV=1	[more]
tr\|A0A2I4GKN7\|A0A2I4GKN7_9ROSI	2.7e-16	40.98	protein BPS1, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC109008712 PE=4 ...	[more]
tr\|F6HHW9\|F6HHW9_VITVI	4.6e-16	43.65	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0158g00090 PE=4 SV=...	[more]
tr\|A0A2N9J077\|A0A2N9J077_FAGSY	1.2e-13	37.10	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58080 PE=4 SV=1	[more]
tr\|A0A2I4E8J1\|A0A2I4E8J1_9ROSI	6.2e-13	37.70	protein BPS1, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC108987265 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004320	DUF241_pln

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G031910.1	CsaV3_3G031910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 84..111
None	No IPR available	PANTHER	PTHR31509	FAMILY NOT NAMED	coord: 1..128
None	No IPR available	PANTHER	PTHR31509:SF13	SUBFAMILY NOT NAMED	coord: 1..128
IPR004320	Protein of unknown function DUF241, plant	PFAM	PF03087	DUF241	coord: 55..120 e-value: 7.8E-6 score: 25.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_3G031910	CSPI07G18860	Wild cucumber (PI 183967)	cpicucB395
CsaV3_3G031910	CSPI03G29470	Wild cucumber (PI 183967)	cpicucB144
CsaV3_3G031910	Cucsa.128220	Cucumber (Gy14) v1	cgycucB180
CsaV3_3G031910	Cucsa.248880	Cucumber (Gy14) v1	cgycucB378
CsaV3_3G031910	CmaCh17G009780	Cucurbita maxima (Rimu)	cmacucB0432
CsaV3_3G031910	CmaCh01G002400	Cucurbita maxima (Rimu)	cmacucB0545
CsaV3_3G031910	CmaCh08G005050	Cucurbita maxima (Rimu)	cmacucB1052
CsaV3_3G031910	CmoCh17G009490	Cucurbita moschata (Rifu)	cmocucB0427
CsaV3_3G031910	CmoCh01G002490	Cucurbita moschata (Rifu)	cmocucB0530
CsaV3_3G031910	CmoCh08G004970	Cucurbita moschata (Rifu)	cmocucB1034
CsaV3_3G031910	Cp4.1LG12g06620	Cucurbita pepo (Zucchini)	cpecucB0158
CsaV3_3G031910	Cp4.1LG17g07960	Cucurbita pepo (Zucchini)	cpecucB0387
CsaV3_3G031910	Cp4.1LG02g15610	Cucurbita pepo (Zucchini)	cpecucB0684
CsaV3_3G031910	CsGy3G027310	Cucumber (Gy14) v2	cgybcucB117
CsaV3_3G031910	Carg07335	Silver-seed gourd	carcucB0800
CsaV3_3G031910	Cla017290	Watermelon (97103) v1	cucwmB203
CsaV3_3G031910	MELO3C024000	Melon (DHL92) v3.5.1	cucmeB205
CsaV3_3G031910	MELO3C023587	Melon (DHL92) v3.5.1	cucmeB186
CsaV3_3G031910	ClCG10G012150	Watermelon (Charleston Gray)	cucwcgB195
CsaV3_3G031910	Lsi02G025400	Bottle gourd (USVL1VR-Ls)	cuclsiB188
CsaV3_3G031910	MELO3C024000.2	Melon (DHL92) v3.6.1	cucmedB198
CsaV3_3G031910	MELO3C023587.2	Melon (DHL92) v3.6.1	cucmedB177
CsaV3_3G031910	Cla97C10G194970	Watermelon (97103) v2	cucwmbB183
CsaV3_3G031910	Bhi11G001158	Wax gourd	cucwgoB226

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsaV3_3G031910	CsaV3_7G030690	Cucumber (Chinese Long) v3	cuccucB154

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_3G031910	Silver-seed gourd	carcucB0485
CsaV3_3G031910	Silver-seed gourd	carcucB0853
CsaV3_3G031910	Cucumber (Gy14) v2	cgybcucB328
CsaV3_3G031910	Cucurbita maxima (Rimu)	cmacucB0280
CsaV3_3G031910	Cucurbita moschata (Rifu)	cmocucB0271
CsaV3_3G031910	Cucurbita pepo (Zucchini)	cpecucB0748
CsaV3_3G031910	Bottle gourd (USVL1VR-Ls)	cuclsiB200