CsaV3_3G031740 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTTATTTAAAAAATAAAAATATTATTTTTTTGGATTCTGGGTTATTCACTCAAATTCCATTTAAAACTCGCTTCAACGCTTCTTCCTCCTCCAAATGCCGTTCTCATTCTCCTCTGCTTCATTTTTGCTCCTCCATGGCGGATTCTTCAGAAAATATACCTCCCTCCAAATCCCCACTCCATTTCCTCTTCAGTTGCTTCCGATCTTCCTCCAAACTTCCTACGAAAAAGGCTTCTTCGATCGCCCCACGCATCCGCCGGACTTCGTCGCGTACTTTCCGATTCAAGAAATCCTCTGCAACTGTTCCGGTCGACGTCGCCGATCCATCTCATGATGAGCTCTCTTTTTTGCCGGAGTTCAAGAAATCGCCTCCACTGTCGTTCATTATGCCGAAAGCGCCACAGGTCGGAGGTGAGATCGTTGTGGATTCGTCACTAAAGCCGAGTCAAACTCGGAAGAAGCCCCATTCAACTCAGTCAAATTTCACGACGAAGAAACTCTCGCCGACGAGAAAAACAGCCGCGTTGTTGCACTCCGTATCTCTTCCTTCTCAGCAATTGACCCGCCAGAAATATTTTAAAAAACCAGTCTCTGGTCATCTCCCTGCCGCCGTCGCAACCACCTCCCCGGCGTTTTCAGACGGTAATAAACCGACCCCGAAGTTGCCTACGTATTATCCGGTCAAGAATTTCGATCGGGTGATTATGGTTGTTATTGTGGCGATTGTGATGCTGTGGGGACGACTATGCGCCATACTCTGCACAACAGCGCTGTTCTACTTGGGACGTCGAATGAGATCGGAAATCGAACCGGACGGCGGCGGCAGCGGCAGAGGTAGGCTTAGCGGGAATTCTTGAGAGGATTAGGCGAAAATACGTTGGTGAATTGAACACGGTTACGGAAAACCGCCATGCGAGAGAAGGTTGGAGAAGAGGTTTTCTTTGAATGACGGAAGAGAGATGGTGTTATTTTTGTAAATTTAATGGTCAGTGGTGTTTAAACTCTGTAAAAAACTAATAATTTGACTAATTCATAAAATTATTTTTTTTTTTTTCTCTTGTATTTTTTGTGGATTTATTCTATAGTCTTCTTTCTACATTTCTACTTTCTTTTTCTTTCTTTCTTATTGAGATCCAGTTGAAAGCATATAACATAAATAAAGTGTAGATAATCAAAT ATGGCGGATTCTTCAGAAAATATACCTCCCTCCAAATCCCCACTCCATTTCCTCTTCAGTTGCTTCCGATCTTCCTCCAAACTTCCTACGAAAAAGGCTTCTTCGATCGCCCCACGCATCCGCCGGACTTCGTCGCGTACTTTCCGATTCAAGAAATCCTCTGCAACTGTTCCGGTCGACGTCGCCGATCCATCTCATGATGAGCTCTCTTTTTTGCCGGAGTTCAAGAAATCGCCTCCACTGTCGTTCATTATGCCGAAAGCGCCACAGGTCGGAGGTGAGATCGTTGTGGATTCGTCACTAAAGCCGAGTCAAACTCGGAAGAAGCCCCATTCAACTCAGTCAAATTTCACGACGAAGAAACTCTCGCCGACGAGAAAAACAGCCGCGTTGTTGCACTCCGTATCTCTTCCTTCTCAGCAATTGACCCGCCAGAAATATTTTAAAAAACCAGTCTCTGGTCATCTCCCTGCCGCCGTCGCAACCACCTCCCCGGCGTTTTCAGACGGTAATAAACCGACCCCGAAGTTGCCTACGTATTATCCGGTCAAGAATTTCGATCGGGTGATTATGGTTGTTATTGTGGCGATTGTGATGCTGTGGGGACGACTATGCGCCATACTCTGCACAACAGCGCTGTTCTACTTGGGACGTCGAATGAGATCGGAAATCGAACCGGACGGCGGCGGCAGCGGCAGAGGTAGGCTTAGCGGGAATTCTTGA ATGGCGGATTCTTCAGAAAATATACCTCCCTCCAAATCCCCACTCCATTTCCTCTTCAGTTGCTTCCGATCTTCCTCCAAACTTCCTACGAAAAAGGCTTCTTCGATCGCCCCACGCATCCGCCGGACTTCGTCGCGTACTTTCCGATTCAAGAAATCCTCTGCAACTGTTCCGGTCGACGTCGCCGATCCATCTCATGATGAGCTCTCTTTTTTGCCGGAGTTCAAGAAATCGCCTCCACTGTCGTTCATTATGCCGAAAGCGCCACAGGTCGGAGGTGAGATCGTTGTGGATTCGTCACTAAAGCCGAGTCAAACTCGGAAGAAGCCCCATTCAACTCAGTCAAATTTCACGACGAAGAAACTCTCGCCGACGAGAAAAACAGCCGCGTTGTTGCACTCCGTATCTCTTCCTTCTCAGCAATTGACCCGCCAGAAATATTTTAAAAAACCAGTCTCTGGTCATCTCCCTGCCGCCGTCGCAACCACCTCCCCGGCGTTTTCAGACGGTAATAAACCGACCCCGAAGTTGCCTACGTATTATCCGGTCAAGAATTTCGATCGGGTGATTATGGTTGTTATTGTGGCGATTGTGATGCTGTGGGGACGACTATGCGCCATACTCTGCACAACAGCGCTGTTCTACTTGGGACGTCGAATGAGATCGGAAATCGAACCGGACGGCGGCGGCAGCGGCAGAGGTAGGCTTAGCGGGAATTCTTGA MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVDVADPSHDELSFLPEFKKSPPLSFIMPKAPQVGGEIVVDSSLKPSQTRKKPHSTQSNFTTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLPTYYPVKNFDRVIMVVIVAIVMLWGRLCAILCTTALFYLGRRMRSEIEPDGGGSGRGRLSGNS
BLAST of CsaV3_3G031740 vs. NCBI nr
Match: KGN58547.1 (hypothetical protein Csa_3G680630 [Cucumis sativus]) HSP 1 Score: 464.5 bits (1194), Expect = 2.1e-127 Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0
BLAST of CsaV3_3G031740 vs. NCBI nr
Match: XP_022949237.1 (uncharacterized protein LOC111452650 [Cucurbita moschata]) HSP 1 Score: 211.8 bits (538), Expect = 2.5e-51 Identity = 131/238 (55.04%), Postives = 159/238 (66.81%), Query Frame = 0
BLAST of CsaV3_3G031740 vs. NCBI nr
Match: XP_022934627.1 (uncharacterized protein LOC111441760 [Cucurbita moschata] >XP_022934628.1 uncharacterized protein LOC111441760 [Cucurbita moschata] >XP_022934629.1 uncharacterized protein LOC111441760 [Cucurbita moschata]) HSP 1 Score: 151.4 bits (381), Expect = 4.0e-33 Identity = 116/245 (47.35%), Postives = 134/245 (54.69%), Query Frame = 0
BLAST of CsaV3_3G031740 vs. NCBI nr
Match: XP_022982640.1 (uncharacterized protein LOC111481455 [Cucurbita maxima] >XP_022982641.1 uncharacterized protein LOC111481455 [Cucurbita maxima]) HSP 1 Score: 143.7 bits (361), Expect = 8.3e-31 Identity = 107/243 (44.03%), Postives = 127/243 (52.26%), Query Frame = 0
BLAST of CsaV3_3G031740 vs. TrEMBL
Match: tr|A0A0A0LCZ2|A0A0A0LCZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G680630 PE=4 SV=1) HSP 1 Score: 464.5 bits (1194), Expect = 1.4e-127 Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |