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The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCGGAATCTTCTGACAAAATCCCTCCCTCCAAATCCCGACCCCATTTCCTCCTCCGTTGCTTCCGATCTTCCCCCAAACTTCATCCCAAAAAGCCTTCCCCGATCGCCCCACGTAACCGCCGGACTTTCTCGCTTTCCTTCCGATTCAAGAAGTCCTCTGCAACTGTGCCGGTCGACGCTGCCGTCCCATCCCACAATGAACTCTCTTTTTCGCCGGACTTCAAGAAACCGCCTCCCCTGCCGCTGATTACACCCAGAACACCACCGGTCGGAGGCGAGATCGTCGTGGATTCGGGCTGTAAGCCAATAAAGCCGAGTCAAACTCGGAAGAAATCCGAGTCAACTCAGTCCAATTTCACGGCGGAGAAACTCTCGCCGGTGAAAAAAACCACCGCGTTGTTGCACTCTGTTTCTCTTCCCTCTCAACTATTAAACCGCCAGAATGATTTGAAAAAATCTGTCTCTTATCTCCCCGCCGCCGTCGCTACCATCGCGCCGGCGTTCTCAGACCGTCATAAACCGGCGCCAAATCTGCCGACGAATTCTCCGGCCAAGAATTTCGATCGGGTGATTGTGATTGTTATGGTGGCGATTGTGGTGCTGTGGGGGCGACTCTGCGCCATACTCTGCACGGCGGCGCTGTTCTACTTGCGACGTCGCCTGAGATCGGAAATCGTACCGGAAAGCAGCGGCAGAGGTGGTTTGGGGCGAATATCTTGA mRNA sequence ATGGCGGAATCTTCTGACAAAATCCCTCCCTCCAAATCCCGACCCCATTTCCTCCTCCGTTGCTTCCGATCTTCCCCCAAACTTCATCCCAAAAAGCCTTCCCCGATCGCCCCACGTAACCGCCGGACTTTCTCGCTTTCCTTCCGATTCAAGAAGTCCTCTGCAACTGTGCCGGTCGACGCTGCCGTCCCATCCCACAATGAACTCTCTTTTTCGCCGGACTTCAAGAAACCGCCTCCCCTGCCGCTGATTACACCCAGAACACCACCGGTCGGAGGCGAGATCGTCGTGGATTCGGGCTGTAAGCCAATAAAGCCGAGTCAAACTCGGAAGAAATCCGAGTCAACTCAGTCCAATTTCACGGCGGAGAAACTCTCGCCGGTGAAAAAAACCACCGCGTTGTTGCACTCTGTTTCTCTTCCCTCTCAACTATTAAACCGCCAGAATGATTTGAAAAAATCTGTCTCTTATCTCCCCGCCGCCGTCGCTACCATCGCGCCGGCGTTCTCAGACCGTCATAAACCGGCGCCAAATCTGCCGACGAATTCTCCGGCCAAGAATTTCGATCGGGTGATTGTGATTGTTATGGTGGCGATTGTGGTGCTGTGGGGGCGACTCTGCGCCATACTCTGCACGGCGGCGCTGTTCTACTTGCGACGTCGCCTGAGATCGGAAATCGTACCGGAAAGCAGCGGCAGAGGTGGTTTGGGGCGAATATCTTGA Coding sequence (CDS) ATGGCGGAATCTTCTGACAAAATCCCTCCCTCCAAATCCCGACCCCATTTCCTCCTCCGTTGCTTCCGATCTTCCCCCAAACTTCATCCCAAAAAGCCTTCCCCGATCGCCCCACGTAACCGCCGGACTTTCTCGCTTTCCTTCCGATTCAAGAAGTCCTCTGCAACTGTGCCGGTCGACGCTGCCGTCCCATCCCACAATGAACTCTCTTTTTCGCCGGACTTCAAGAAACCGCCTCCCCTGCCGCTGATTACACCCAGAACACCACCGGTCGGAGGCGAGATCGTCGTGGATTCGGGCTGTAAGCCAATAAAGCCGAGTCAAACTCGGAAGAAATCCGAGTCAACTCAGTCCAATTTCACGGCGGAGAAACTCTCGCCGGTGAAAAAAACCACCGCGTTGTTGCACTCTGTTTCTCTTCCCTCTCAACTATTAAACCGCCAGAATGATTTGAAAAAATCTGTCTCTTATCTCCCCGCCGCCGTCGCTACCATCGCGCCGGCGTTCTCAGACCGTCATAAACCGGCGCCAAATCTGCCGACGAATTCTCCGGCCAAGAATTTCGATCGGGTGATTGTGATTGTTATGGTGGCGATTGTGGTGCTGTGGGGGCGACTCTGCGCCATACTCTGCACGGCGGCGCTGTTCTACTTGCGACGTCGCCTGAGATCGGAAATCGTACCGGAAAGCAGCGGCAGAGGTGGTTTGGGGCGAATATCTTGA Protein sequence MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDAAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSGCKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSYLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIVMVAIVVLWGRLCAILCTAALFYLRRRLRSEIVPESSGRGGLGRIS
BLAST of Cla97C10G194820 vs. NCBI nr
Match: KGN58547.1 (hypothetical protein Csa_3G680630 [Cucumis sativus]) HSP 1 Score: 303.5 bits (776), Expect = 6.3e-79 Identity = 169/241 (70.12%), Postives = 188/241 (78.01%), Query Frame = 0
Query: 1 MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVD 60
MA+SS+ IPPSKS HFL CFRSS KL KK S IAPR RRT S +FRFKKSSATVPVD
Sbjct: 1 MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVD 60
Query: 61 AAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSGCKPIKPSQTRKKSESTQSNF 120
A PSH+ELSF P+FKK PPL I P+ P VGGEIVVDS +KPSQTRKK STQSNF
Sbjct: 61 VADPSHDELSFLPEFKKSPPLSFIMPKAPQVGGEIVVDSS---LKPSQTRKKPHSTQSNF 120
Query: 121 TAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVS-YLPAAVATIAPAFSDRHKPAPNL 180
T +KLSP +KT ALLHSVSLPSQ L RQ KK VS +LPAAVAT +PAFSD +KP P L
Sbjct: 121 TTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKL 180
Query: 181 PTNSPAKNFDRVIVIVMVAIVVLWGRLCAILCTAALFYLRRRLRSEIVPESSGRGGLGRI 240
PT P KNFDRVI++V+VAIV+LWGRLCAILCT ALFYL RR+RSEI P+ G G GR+
Sbjct: 181 PTYYPVKNFDRVIMVVIVAIVMLWGRLCAILCTTALFYLGRRMRSEIEPDGGG-SGRGRL 237
BLAST of Cla97C10G194820 vs. NCBI nr
Match: XP_022949237.1 (uncharacterized protein LOC111452650 [Cucurbita moschata]) HSP 1 Score: 228.0 bits (580), Expect = 3.4e-56 Identity = 139/237 (58.65%), Postives = 163/237 (68.78%), Query Frame = 0
Query: 1 MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVD 60
MAE+S+K+ PSK HFLLRCF SSPK+ KK R+ R S FRFKKSSATVP+D
Sbjct: 1 MAEASEKMSPSKRPLHFLLRCFGSSPKVQTKKNPTTGRRDSRIPSPRFRFKKSSATVPID 60
Query: 61 AAVPS-----HNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSGCKPIKPSQTRKKSES 120
AVP ++ SFSP+FKKPPP PLI R P V +IV + IKPSQ KK+ES
Sbjct: 61 VAVPEITVPCDDKASFSPEFKKPPPSPLIKSRAPTVRTKIV-----ELIKPSQPWKKTES 120
Query: 121 TQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSYLPAAVATIAPAFSDRHKP 180
T+S+F L+P K+T ALLHS+SLPS+ LNRQ D KK+VS+L +AV T P S+R KP
Sbjct: 121 TRSDF----LTPAKRTAALLHSISLPSRRLNRQKDFKKTVSHL-SAVKTPTPTSSERRKP 180
Query: 181 APNLPTNSPAKNFDRVIVIVMVAIVVLWGRLCAILCTAALFYLRRRLRSEIVPESSG 233
A P NSPAK D +IVIV VAIVVLWG+LCAILCT ALFY RRLRSE E G
Sbjct: 181 ADKPPMNSPAKILDLIIVIVAVAIVVLWGQLCAILCTTALFYFCRRLRSETELEGGG 227
BLAST of Cla97C10G194820 vs. NCBI nr
Match: XP_022934627.1 (uncharacterized protein LOC111441760 [Cucurbita moschata] >XP_022934628.1 uncharacterized protein LOC111441760 [Cucurbita moschata] >XP_022934629.1 uncharacterized protein LOC111441760 [Cucurbita moschata]) HSP 1 Score: 205.7 bits (522), Expect = 1.8e-49 Identity = 135/244 (55.33%), Postives = 149/244 (61.07%), Query Frame = 0
Query: 1 MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVD 60
MAESSD K R HFL RCFRSSP + +K PIA NRRT SL FRFKKSSATVP+D
Sbjct: 1 MAESSD-----KPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLD 60
Query: 61 AAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSGCKPIKPSQTRKKSESTQSNF 120
AAVP H+ELS SP+F PPP PLI GEI+VDSGCK IKPS+TRKKS
Sbjct: 61 AAVPCHDELSLSPEFNTPPPPPLIK-------GEIIVDSGCKTIKPSKTRKKSXXXXXXX 120
Query: 121 TAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSYLPAAVATIAPAF--SDRHKPAPN 180
+ LKKS+S+LP A A + + SDR KP
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXK------GLKKSISHLPTAAAALTTSLPSSDRWKP--- 180
Query: 181 LPTNSPAKNFDRVIVIVMVAIVVLWGRLCAILCTAALFYLRRRLRS--EIVPESSGRGGL 240
PTNSP K FD VIVIV VAIVVLWGRLCAILCTAALFYLRR LRS E+ G G
Sbjct: 181 -PTNSPNKKFDLVIVIVAVAIVVLWGRLCAILCTAALFYLRRCLRSKAELDVVIHGGGAF 222
BLAST of Cla97C10G194820 vs. NCBI nr
Match: XP_022982640.1 (uncharacterized protein LOC111481455 [Cucurbita maxima] >XP_022982641.1 uncharacterized protein LOC111481455 [Cucurbita maxima]) HSP 1 Score: 186.0 bits (471), Expect = 1.5e-43 Identity = 123/242 (50.83%), Postives = 137/242 (56.61%), Query Frame = 0
Query: 1 MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVD 60
MAESSD K R HFL RCFRSSP + +K IA NRRT SL FRFKK SATVP+D
Sbjct: 1 MAESSD-----KPRLHFLFRCFRSSPNVQRQKAQQIASPNRRTPSLRFRFKKCSATVPLD 60
Query: 61 AAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSGCKPIKPSQTRKKSESTQSNF 120
AAVP H+ELSFSP+F PPP P+ GEI+VDSGCK IK S
Sbjct: 61 AAVPCHDELSFSPEFNTPPP-------PSPIKGEIIVDSGCKTIKQSXXXXXXXXXXXXX 120
Query: 121 TAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSYLPAAVATIAPAFSDRHKPAPNLP 180
HS + LKKS+S+LP AVA P S + P
Sbjct: 121 XXXXXXXXXXXXXXXHS----------EKGLKKSISHLPIAVADADPTTSLASSDSWKAP 180
Query: 181 TNSPAKNFDRVIVIVMVAIVVLWGRLCAILCTAALFYLRRRLRS--EIVPESSGRGGLGR 240
TNSP FD V VIV VAIVVLWGRLCAILCTAALFYLRR LRS E+ G G G+
Sbjct: 181 TNSPTIKFDLVTVIVAVAIVVLWGRLCAILCTAALFYLRRCLRSKAELDVVVDGGGAFGK 220
BLAST of Cla97C10G194820 vs. TrEMBL
Match: tr|A0A0A0LCZ2|A0A0A0LCZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G680630 PE=4 SV=1) HSP 1 Score: 303.5 bits (776), Expect = 4.2e-79 Identity = 169/241 (70.12%), Postives = 188/241 (78.01%), Query Frame = 0
Query: 1 MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVD 60
MA+SS+ IPPSKS HFL CFRSS KL KK S IAPR RRT S +FRFKKSSATVPVD
Sbjct: 1 MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVD 60
Query: 61 AAVPSHNELSFSPDFKKPPPLPLITPRTPPVGGEIVVDSGCKPIKPSQTRKKSESTQSNF 120
A PSH+ELSF P+FKK PPL I P+ P VGGEIVVDS +KPSQTRKK STQSNF
Sbjct: 61 VADPSHDELSFLPEFKKSPPLSFIMPKAPQVGGEIVVDSS---LKPSQTRKKPHSTQSNF 120
Query: 121 TAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVS-YLPAAVATIAPAFSDRHKPAPNL 180
T +KLSP +KT ALLHSVSLPSQ L RQ KK VS +LPAAVAT +PAFSD +KP P L
Sbjct: 121 TTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKL 180
Query: 181 PTNSPAKNFDRVIVIVMVAIVVLWGRLCAILCTAALFYLRRRLRSEIVPESSGRGGLGRI 240
PT P KNFDRVI++V+VAIV+LWGRLCAILCT ALFYL RR+RSEI P+ G G GR+
Sbjct: 181 PTYYPVKNFDRVIMVVIVAIVMLWGRLCAILCTTALFYLGRRMRSEIEPDGGG-SGRGRL 237
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KGN58547.1 | 6.3e-79 | 70.12 | hypothetical protein Csa_3G680630 [Cucumis sativus] | [more] |
| XP_022949237.1 | 3.4e-56 | 58.65 | uncharacterized protein LOC111452650 [Cucurbita moschata] | [more] |
| XP_022934627.1 | 1.8e-49 | 55.33 | uncharacterized protein LOC111441760 [Cucurbita moschata] >XP_022934628.1 unchar... | [more] |
| XP_022982640.1 | 1.5e-43 | 50.83 | uncharacterized protein LOC111481455 [Cucurbita maxima] >XP_022982641.1 uncharac... | [more] |
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0008150 |
biological_process |
| biological_process |
GO:0006412 |
translation |
| cellular_component |
GO:0005575 |
cellular_component |
| cellular_component |
GO:0016020 |
membrane |
| cellular_component |
GO:0016021 |
integral component of membrane |
| cellular_component |
GO:0005622 |
intracellular |
| cellular_component |
GO:0030529 |
intracellular ribonucleoprotein complex |
| cellular_component |
GO:0005840 |
ribosome |
| molecular_function |
GO:0003674 |
molecular_function |
| molecular_function |
GO:0003735 |
structural constituent of ribosome |
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 100..122 |
| None | No IPR available | PANTHER | PTHR34379 | FAMILY NOT NAMED | coord: 1..224 |
| None | No IPR available | PANTHER | PTHR34379:SF1 | SUBFAMILY NOT NAMED | coord: 1..224 |
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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