CsaV3_3G027490 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G027490
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionPentatricopeptide repeat-containing protein
Locationchr3 : 23800974 .. 23804212 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTAATTTCATTAATGAAGAAATGGCTAATATATAGCCAAATGTCACGTGGACAATACAACAAGCAAAGCTAATAATTAAGTGATTAACAGAAACTAATACTGATTAAGAGATTGAGTTTTCTGATGTGGTTATTAAACCTATGAAAATGTGCATTAAAATGTGGGTGTATGTATAGAGATTTAATACAATGGTTCTAACAAAGAGTTTGGGTATAATAGCAATCGAGTGGCTGTGAGAAGACGGCAGCGTCCGAAGGAACCAAACAAAATCCATATTATCCTAAAAAAAAAAAAACCCATTTGGCAAATCCACTCTCATATTAATTTCTTTCTCTTCAATCCTCTCATTTCCAGTTCAAAAATGGAGCACATTTACTGCCACTCCTCTCTGTAAGGTAATTCTGTTCTTCATTTCTCTTTTCAACTTCTTCGGATTGTGATGGGAAGTCATCCATAAGGACTCTGGAATTCATTGCCATTTGAATTCTGGGATTATCTTATCTTTTCTCCTTCATTTCTATTGACGATGCATGCTCTTAGTAATTGGTGTCCAACTAGTTGCTCCGGCGTTGAATTAGGTTCTTATTCTGTAGTTCATAGGTCATGGAAAAGGGTAAAGAGTTTTGGTTTTTCTGATTGTCGTTGTGGAAATTGGGGTTTCTCTTTGATTTCCTTTAACTTGAGTGTTTTGAGAAGTGGCTTTTGCTACGAGAATTCGAGATTTGTGTGTAATTGTGAGTTCCGCCATGGCTGTTCTAAGCTTAGAGTTGTTCCATTAATGAAGACGAACAGGAATTCTCTTGGGGCTTTCTGTTTATCTGCTTGGGCTGTTGAACAACCAACAATTGATGATGAAATCACTAGGGTTGAATCAAATTCTAGAGATGGTTTGCCTGAGAGAGGATTAGATTGGGATGATGATGACGACGGCAAAGTTAATGGTGAAAATAGCCATGGAGGAGGGAGCTTTAAAGATGAAGGAGAATTGGAGGGGGTGGGAGATGTTAGGGTTGATGTTCGTGCACTAGCGGCTCAGTTGCAGCTTGCTCGTACGGCAGATGATGTTGACCAGGTTCTCAAGGACATGGTTGAATTGCCTCTTCAAGTTTTCTCATCCATGATTAGGGGTTTTGGGAGAGACAGAAGGTTGGAGTGTGCAGTAGCTCTTGTTGACTGGCTTAAGAGAAAGAAGATTGAAACTAATGGTCGTATTGCACCAAACTTGTTCATATACAATAGTCTTCTTGGTGCAGTTAAGCAATCGGGAGAGCTTTCGAGAATGGAAAATGTCTTGACTGATATGGCACAGGAAGGAATTGTTTCAAATGTTGTTACGTACAACACGATTATGTCCATTTACTTGGAACAAGGACTAGCAATGAAAGCTCTTGGCATTCTTGAAGAGATGCCGAAGAAAGGCCTAACTCTGTCTCCCGTATCCTACTCTACGGCCTTACGAGCATACCGAAGGATGAAAGATGGGAATGGTGCTTTAAAGTTCATGGTTGAGTTGAGAGAAAGATATCGTAATGGTGAAATAGCGAAAGATGATAATGTAGATTGGGCTAATGAGTTCTTGAAGCTCGAAAACTTTACAAGACGTGTTTGCTACCAAGTAATGAGGATTTGGCTTGTGAAGGGTGACTGTGCAAGCACGAAGGTGTTGCAACTTCTAATGGAAATGGATAAAGCAGGACTGTCACTTGATCGTGCTGAAGCGGAGCGACTTATTTGGGCTTGTACGTGTGCAGAACACTATAATGTAGCAAAAGAATTGTACTTCAGGATAAGAGAAAAGCAATGTGGTATAAGCTTATCTGTTTGTAATCATGTGATTTGGTTGATGGGGAAAGCTAAGAAATGGTGGGCAGCATTGGAGATTTATGAAGATTTATTAGAGAAAGGACCAAAGCCAAACAACATGTCATATGAACTAATTGTCTCTCACTTCAATGTTCTTCTCACAGCCGCAAAGAAAAGAGGAATTTGGAGATGGGGTGTTCGGTTACTCAACAAAATGGAAGAGAAAGGTCTTAGACCTGGAAGTCGGGAATGGAACGCTGTTCTTGTTGCATGTTCCAGAGCTGCAGAAACTTCTGCAGCTATAGATATTTTTAGGAAAATGGTTGAACAAGGTGAAAAACCCACTGTCCTTTCATATGGGGCATTACTTAGTGCTCTGGAAAAGGGAAAGCTATATGATGAAGCACGCAGTGTCTGGGATCATATGATTAGAGTTGGGGTGGAGCCAAACATCTATGCTTATACGACTATGGCGTCAGTTTTCACTGGTCAAGGAAAATTTAATATGGTTGAAGTCACTATCAATGATATGGTTGCATCAGGCATTGAGCCAACAGTCGTCACATACAATGCAATAATCACGGGATGTGTCCGTAATGGGATGAGCAGTGTAGCTTATGAGTGGTTTCACCGCATGAAAGTTAGAAACATCTCTCCGAACGAGGTGAGTTACGAGTTACTCATTGAGGCCCTTGCAAAGGAAGGTAAACCAAGGCTGGCTTATGAGTTATACATGAGGGCTAAGGATGAGGGTCTCAATCTTTCTTCTAAAGTGTATGATGCAGTAATTGAATCCTCTCAACTTTATGGAGCCTCCGTTAATATAAAATTGTTAGGGTTGCGGCCACCTGACAGGAACAAGAGTTCATAGGTTAAAAAGAAGACTTCAAAGAATGTTTGTAAAGCTGCAGATGTTCCTAGAAAAAGCAGGAACAATTTGAAAGAAGGAAGCTAGTGGTTGATGATCCCTCCATCAGTACTCTGATCTCTTGATTTGTGCATAAAGTATTTGAAGCGACTCAGGAGGAAGCCTATGACTTCTGATTACCCGATCCGAGTGCATATGGAGCTCAGAAACTAAAAAGTCAATTGAAAGTGATGTGGCTGATCAAGGTGAAACTCCTGGGAAATCTGCAGTATCCAGTAAGATACTTTTCTCTGATATGTATGGGAGTTTCACGGTAAAGAAAAGTTAAAACACAATCTGTGATGTAGAAAGCCAAAGTAATGAAAGCATATGAGAATTTGTAGCTTTTTCCTTTTTATCTATAAAATGGTGTAAAGATGAAAGGTCTCTTGATCTAATCCCTTTGCAATGGAAACTTTTAATAAATGAGTTTTGAGTATTTAACTGTGTAATCCCTTTTGAGCAGCCTTGTTTGAACTTTGAACTTTGAACTTTGAACTTTGATTCCTACTAGAAAAGTACTTAATA

mRNA sequence

ATGGTTGAATTGCCTCTTCAAGTTTTCTCATCCATGATTAGGGGTTTTGGGAGAGACAGAAGGTTGGAGTGTGCAGTAGCTCTTGTTGACTGGCTTAAGAGAAAGAAGATTGAAACTAATGGTCGTATTGCACCAAACTTGTTCATATACAATAGTCTTCTTGGTGCAGTTAAGCAATCGGGAGAGCTTTCGAGAATGGAAAATGTCTTGACTGATATGGCACAGGAAGGAATTGTTTCAAATGTTGTTACGTACAACACGATTATGTCCATTTACTTGGAACAAGGACTAGCAATGAAAGCTCTTGGCATTCTTGAAGAGATGCCGAAGAAAGGCCTAACTCTGTCTCCCGTATCCTACTCTACGGCCTTACGAGCATACCGAAGGATGAAAGATGGGAATGGTGCTTTAAAGTTCATGGTTGAGTTGAGAGAAAGATATCGTAATGGTGAAATAGCGAAAGATGATAATGTAGATTGGGCTAATGAGTTCTTGAAGCTCGAAAACTTTACAAGACGTGTTTGCTACCAAGTAATGAGGATTTGGCTTGTGAAGGGTGACTGTGCAAGCACGAAGGTGTTGCAACTTCTAATGGAAATGGATAAAGCAGGACTGTCACTTGATCGTGCTGAAGCGGAGCGACTTATTTGGGCTTGTACGTGTGCAGAACACTATAATGTAGCAAAAGAATTGTACTTCAGGATAAGAGAAAAGCAATGTGGTATAAGCTTATCTGTTTGTAATCATGTGATTTGGTTGATGGGGAAAGCTAAGAAATGGTGGGCAGCATTGGAGATTTATGAAGATTTATTAGAGAAAGGACCAAAGCCAAACAACATGTCATATGAACTAATTGTCTCTCACTTCAATGTTCTTCTCACAGCCGCAAAGAAAAGAGGAATTTGGAGATGGGGTGTTCGGTTACTCAACAAAATGGAAGAGAAAGGTCTTAGACCTGGAAGTCGGGAATGGAACGCTGTTCTTGTTGCATGTTCCAGAGCTGCAGAAACTTCTGCAGCTATAGATATTTTTAGGAAAATGGTTGAACAAGGTGAAAAACCCACTGTCCTTTCATATGGGGCATTACTTAGTGCTCTGGAAAAGGGAAAGCTATATGATGAAGCACGCAGTGTCTGGGATCATATGATTAGAGTTGGGGTGGAGCCAAACATCTATGCTTATACGACTATGGCGTCAGTTTTCACTGGTCAAGGAAAATTTAATATGGTTGAAGTCACTATCAATGATATGGTTGCATCAGGCATTGAGCCAACAGTCGTCACATACAATGCAATAATCACGGGATGTGTCCGTAATGGGATGAGCAGTGTAGCTTATGAGTGGTTTCACCGCATGAAAGTTAGAAACATCTCTCCGAACGAGGTGAGTTACGAGTTACTCATTGAGGCCCTTGCAAAGGAAGGTAAACCAAGGCTGGCTTATGAGTTATACATGAGGGCTAAGGATGAGGGTCTCAATCTTTCTTCTAAAGTGTATGATGCAGTAATTGAATCCTCTCAACTTTATGGAGCCTCCGTTAATATAAAATTGTTAGGGTTGCGGCCACCTGACAGGAACAAGAGTTCATAG

Coding sequence (CDS)

ATGGTTGAATTGCCTCTTCAAGTTTTCTCATCCATGATTAGGGGTTTTGGGAGAGACAGAAGGTTGGAGTGTGCAGTAGCTCTTGTTGACTGGCTTAAGAGAAAGAAGATTGAAACTAATGGTCGTATTGCACCAAACTTGTTCATATACAATAGTCTTCTTGGTGCAGTTAAGCAATCGGGAGAGCTTTCGAGAATGGAAAATGTCTTGACTGATATGGCACAGGAAGGAATTGTTTCAAATGTTGTTACGTACAACACGATTATGTCCATTTACTTGGAACAAGGACTAGCAATGAAAGCTCTTGGCATTCTTGAAGAGATGCCGAAGAAAGGCCTAACTCTGTCTCCCGTATCCTACTCTACGGCCTTACGAGCATACCGAAGGATGAAAGATGGGAATGGTGCTTTAAAGTTCATGGTTGAGTTGAGAGAAAGATATCGTAATGGTGAAATAGCGAAAGATGATAATGTAGATTGGGCTAATGAGTTCTTGAAGCTCGAAAACTTTACAAGACGTGTTTGCTACCAAGTAATGAGGATTTGGCTTGTGAAGGGTGACTGTGCAAGCACGAAGGTGTTGCAACTTCTAATGGAAATGGATAAAGCAGGACTGTCACTTGATCGTGCTGAAGCGGAGCGACTTATTTGGGCTTGTACGTGTGCAGAACACTATAATGTAGCAAAAGAATTGTACTTCAGGATAAGAGAAAAGCAATGTGGTATAAGCTTATCTGTTTGTAATCATGTGATTTGGTTGATGGGGAAAGCTAAGAAATGGTGGGCAGCATTGGAGATTTATGAAGATTTATTAGAGAAAGGACCAAAGCCAAACAACATGTCATATGAACTAATTGTCTCTCACTTCAATGTTCTTCTCACAGCCGCAAAGAAAAGAGGAATTTGGAGATGGGGTGTTCGGTTACTCAACAAAATGGAAGAGAAAGGTCTTAGACCTGGAAGTCGGGAATGGAACGCTGTTCTTGTTGCATGTTCCAGAGCTGCAGAAACTTCTGCAGCTATAGATATTTTTAGGAAAATGGTTGAACAAGGTGAAAAACCCACTGTCCTTTCATATGGGGCATTACTTAGTGCTCTGGAAAAGGGAAAGCTATATGATGAAGCACGCAGTGTCTGGGATCATATGATTAGAGTTGGGGTGGAGCCAAACATCTATGCTTATACGACTATGGCGTCAGTTTTCACTGGTCAAGGAAAATTTAATATGGTTGAAGTCACTATCAATGATATGGTTGCATCAGGCATTGAGCCAACAGTCGTCACATACAATGCAATAATCACGGGATGTGTCCGTAATGGGATGAGCAGTGTAGCTTATGAGTGGTTTCACCGCATGAAAGTTAGAAACATCTCTCCGAACGAGGTGAGTTACGAGTTACTCATTGAGGCCCTTGCAAAGGAAGGTAAACCAAGGCTGGCTTATGAGTTATACATGAGGGCTAAGGATGAGGGTCTCAATCTTTCTTCTAAAGTGTATGATGCAGTAATTGAATCCTCTCAACTTTATGGAGCCTCCGTTAATATAAAATTGTTAGGGTTGCGGCCACCTGACAGGAACAAGAGTTCATAG

Protein sequence

MVELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQSGELSRMENVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAMKALGILEEMPKKGLTLSPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRVCYQVMRIWLVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFRIREKQCGISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIWRWGVRLLNKMEEKGLRPGSREWNAVLVACSRAAETSAAIDIFRKMVEQGEKPTVLSYGALLSALEKGKLYDEARSVWDHMIRVGVEPNIYAYTTMASVFTGQGKFNMVEVTINDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKEGKPRLAYELYMRAKDEGLNLSSKVYDAVIESSQLYGASVNIKLLGLRPPDRNKSS
Homology
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BLAST of CsaV3_3G027490 vs. NCBI nr
Match: XP_011651578.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g46610 [Cucumis sativus] >KGN58219.1 hypothetical protein Csa_3G595200 [Cucumis sativus])

HSP 1 Score: 532.7 bits (1371), Expect = 1.4e-147
Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0 

Query: 1   MVELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQS 60
           MVELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQS
Sbjct: 187 MVELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQS 246

Query: 61  GELSRMENVLTDMAQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           GELSRMENVLTDMAQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 247 GELSRMENVLTDMAQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 306

Query: 121 XXXXXXXXXXXXGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRVCYQVMR 180
           XXXXXXXXXXXXGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRVCYQVMR
Sbjct: 307 XXXXXXXXXXXXGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRVCYQVMR 366

Query: 181 IWLVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFRIREKQC 240
           IWLVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFRIREKQC
Sbjct: 367 IWLVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFRIREKQC 426

Query: 241 GISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRG 300
           GISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRG
Sbjct: 427 GISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRG 486

Query: 301 IWRWGVRLLNKMEEKGLRPGSRE 324
           IWRWGVRLLNKMEEKGLRPGSRE
Sbjct: 487 IWRWGVRLLNKMEEKGLRPGSRE 509

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BLAST of CsaV3_3G027490 vs. NCBI nr
Match: XP_008450041.2 (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g46610 [Cucumis melo])

HSP 1 Score: 496.5 bits (1277), Expect = 1.1e-136
Identity = 306/323 (94.74%), Postives = 309/323 (95.67%), Query Frame = 0 

Query: 1   MVELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQS 60
           MVELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQS
Sbjct: 113 MVELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQS 172

Query: 61  GELSRMENVLTDMAQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           GEL +MENVLT+MAQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 173 GELLKMENVLTEMAQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 232

Query: 121 XXXXXXXXXXXXGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRVCYQVMR 180
           XXXXXXXXXXXX          LRERY NGEIAKDDNVDWANEFLKLENFTRRVCYQVMR
Sbjct: 233 XXXXXXXXXXXXXXXXXXXXXXLRERYHNGEIAKDDNVDWANEFLKLENFTRRVCYQVMR 292

Query: 181 IWLVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFRIREKQC 240
           IWLVKGDCASTKVLQLLMEMDKAGLSLDRAE ERLIWACTCAEHYNVAKELY RIREKQC
Sbjct: 293 IWLVKGDCASTKVLQLLMEMDKAGLSLDRAEEERLIWACTCAEHYNVAKELYIRIREKQC 352

Query: 241 GISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRG 300
           GISLSVCNHVIWLMGKAKKWWAALEIYE+LLEKGPKPNNMSYELIVSHFNVLLTAAKKRG
Sbjct: 353 GISLSVCNHVIWLMGKAKKWWAALEIYEELLEKGPKPNNMSYELIVSHFNVLLTAAKKRG 412

Query: 301 IWRWGVRLLNKMEEKGLRPGSRE 324
           IWRWGVRLLNKMEEKGLRPGSRE
Sbjct: 413 IWRWGVRLLNKMEEKGLRPGSRE 435

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BLAST of CsaV3_3G027490 vs. NCBI nr
Match: XP_022928295.1 (pentatricopeptide repeat-containing protein At3g46610-like [Cucurbita moschata])

HSP 1 Score: 479.2 bits (1232), Expect = 1.8e-131
Identity = 288/320 (90.00%), Postives = 305/320 (95.31%), Query Frame = 0 

Query: 3   ELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQSGE 62
           ELPLQVFSS+I+GFGRD+RL CA+ALV+WLK +KIETNGRIAPNLFIYNSLLGAVKQSGE
Sbjct: 188 ELPLQVFSSLIKGFGRDKRLGCAMALVEWLKTRKIETNGRIAPNLFIYNSLLGAVKQSGE 247

Query: 63  LSRMENVLTDMAQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 122
            S+ME++L DM+QEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 248 FSKMEDILNDMSQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 307

Query: 123 XXXXXXXXXXGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRVCYQVMRIW 182
           XXXXXX    GNGALKFMVELRERYRNGEIAKDDNVDW +EFLKLENFTRRVCYQVMRIW
Sbjct: 308 XXXXXXRMKDGNGALKFMVELRERYRNGEIAKDDNVDWDDEFLKLENFTRRVCYQVMRIW 367

Query: 183 LVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFRIREKQCGI 242
           LVKGD ASTKVLQLL EMDKAGLSLDRAE ERL+WACTCAEH+NVAKELY+RIREK+ GI
Sbjct: 368 LVKGDSASTKVLQLLTEMDKAGLSLDRAEEERLVWACTCAEHHNVAKELYYRIREKKSGI 427

Query: 243 SLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIW 302
           SLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNN+SYELIVSHFNVLLTAAK RGIW
Sbjct: 428 SLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSYELIVSHFNVLLTAAKNRGIW 487

Query: 303 RWGVRLLNKMEEKGLRPGSR 323
           RWGVRLLNKMEEKGL+PG R
Sbjct: 488 RWGVRLLNKMEEKGLKPGIR 507

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BLAST of CsaV3_3G027490 vs. NCBI nr
Match: XP_022989603.1 (pentatricopeptide repeat-containing protein At3g46610-like [Cucurbita maxima])

HSP 1 Score: 477.6 bits (1228), Expect = 5.4e-131
Identity = 287/320 (89.69%), Postives = 305/320 (95.31%), Query Frame = 0 

Query: 3   ELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQSGE 62
           ELPLQVFSS+I+GFGRD+RL CA+ALV+WLK +KI+TNGRIAPNLFIYNSLLGAVKQSGE
Sbjct: 186 ELPLQVFSSLIKGFGRDKRLGCALALVEWLKTRKIKTNGRIAPNLFIYNSLLGAVKQSGE 245

Query: 63  LSRMENVLTDMAQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 122
            S+ME++L DM+QEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 246 FSKMEDILNDMSQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 305

Query: 123 XXXXXXXXXXGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRVCYQVMRIW 182
           XXXXXX    GNGALKFMVELRERYRNGEIAKDDNVDW +EFLKLENFTRRVCYQVMRIW
Sbjct: 306 XXXXXXRMKDGNGALKFMVELRERYRNGEIAKDDNVDWDDEFLKLENFTRRVCYQVMRIW 365

Query: 183 LVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFRIREKQCGI 242
           LVKGD ASTKVLQLL EMDKAGLSLDRAE ERL+WACTCAEH+NVAKELY+RIREK+ GI
Sbjct: 366 LVKGDSASTKVLQLLTEMDKAGLSLDRAEEERLVWACTCAEHHNVAKELYYRIREKKSGI 425

Query: 243 SLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIW 302
           SLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNN+SYELIVSHFNVLLTAAK RGIW
Sbjct: 426 SLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSYELIVSHFNVLLTAAKNRGIW 485

Query: 303 RWGVRLLNKMEEKGLRPGSR 323
           RWGVRLLNKMEEKGL+PG R
Sbjct: 486 RWGVRLLNKMEEKGLKPGIR 505

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BLAST of CsaV3_3G027490 vs. NCBI nr
Match: XP_023531416.1 (pentatricopeptide repeat-containing protein At3g46610-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 477.6 bits (1228), Expect = 5.4e-131
Identity = 287/320 (89.69%), Postives = 304/320 (95.00%), Query Frame = 0 

Query: 3   ELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQSGE 62
           ELPLQVFSS+I+GFGRD+RL CA+ALV+WLK +KIETNGRI PNLFIYNSLLGAVKQSGE
Sbjct: 188 ELPLQVFSSLIKGFGRDKRLGCAMALVEWLKTRKIETNGRITPNLFIYNSLLGAVKQSGE 247

Query: 63  LSRMENVLTDMAQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 122
            S+ME++L DM+QEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 248 FSKMEDILNDMSQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 307

Query: 123 XXXXXXXXXXGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRVCYQVMRIW 182
           XXXXXX    GNGALKFMVELRERYRNGEIAKDDNVDW +EFLKLENFTRRVCYQVMRIW
Sbjct: 308 XXXXXXRMKDGNGALKFMVELRERYRNGEIAKDDNVDWDDEFLKLENFTRRVCYQVMRIW 367

Query: 183 LVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFRIREKQCGI 242
           LVKGD ASTKVLQLL EMDKAGLSLDRAE ERL+WACTCAEH+NVAKELY+RIREK+ GI
Sbjct: 368 LVKGDSASTKVLQLLTEMDKAGLSLDRAEEERLVWACTCAEHHNVAKELYYRIREKKSGI 427

Query: 243 SLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIW 302
           SLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNN+SYELIVSHFNVLLTAAK RGIW
Sbjct: 428 SLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSYELIVSHFNVLLTAAKNRGIW 487

Query: 303 RWGVRLLNKMEEKGLRPGSR 323
           RWGVRLLNKMEEKGL+PG R
Sbjct: 488 RWGVRLLNKMEEKGLKPGIR 507

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BLAST of CsaV3_3G027490 vs. TAIR10
Match: AT3G46610.1 (Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 345.5 bits (885), Expect = 5.8e-95
Identity = 210/317 (66.25%), Postives = 239/317 (75.39%), Query Frame = 0 

Query: 3   ELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQSGE 62
           ELPLQVF +MI+GFG+D+RL+ AVA+VDWLKRKK E+ G I PNLFIYNSLLGA++  GE
Sbjct: 143 ELPLQVFCAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGAMRGFGE 202

Query: 63  LSRMENVLTDMAQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 122
               E +L DM +EG                       XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 203 ---AEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKXXXXXXXXXXXXXXXXXXXXXX 262

Query: 123 XXXXXXXXXXGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRVCYQVMRIW 182
           XXXXXXXXXX      F VELRE+Y   EI  D   DW  EF+KLENF  R+CYQVMR W
Sbjct: 263 XXXXXXXXXXXXXXXXFFVELREKYAKREIGNDVGYDWEFEFVKLENFIGRICYQVMRRW 322

Query: 183 LVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFRIREKQCGI 242
           LVK D  +T+VL+LL  MD AG+   R E ERLIWACT  EHY V KELY RIRE+   I
Sbjct: 323 LVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEI 382

Query: 243 SLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIW 302
           SLSVCNH+IWLMGKAKKWWAALEIYEDLL++GP+PNN+SYEL+VSHFN+LL+AA KRGIW
Sbjct: 383 SLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIW 442

Query: 303 RWGVRLLNKMEEKGLRP 320
           RWGVRLLNKME+KGL+P
Sbjct: 443 RWGVRLLNKMEDKGLKP 456

[Close]
BLAST of CsaV3_3G027490 vs. TAIR10
Match: AT5G14350.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 47.8 bits (112), Expect = 2.5e-05
Identity = 27/79 (34.18%), Postives = 42/79 (53.16%), Query Frame = 0 

Query: 256 KAKKWWAALEIYEDLLEKGPKPNNMSYE---------------LIVSHFNVLLTAAKKRG 315
           K +   +ALE+YEDLL++GP+PNN+SYE                 V     LL+A +K  
Sbjct: 95  KLRNGGSALEMYEDLLDEGPEPNNLSYEPMRLQLRPKSIKQWLTTVKSHGALLSALEKGK 154

Query: 316 IWRWGVRLLNKMEEKGLRP 320
           ++   +R+ N M + G+ P
Sbjct: 155 LYDEVLRVWNHMVKVGIEP 173

[Close]
BLAST of CsaV3_3G027490 vs. TAIR10
Match: AT2G16880.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 43.1 bits (100), Expect = 6.1e-04
Identity = 20/76 (26.32%), Postives = 45/76 (59.21%), Query Frame = 0 

Query: 2   VELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQSG 61
           V L +Q F+ ++ G+  + +LE A+ +++     ++ +  ++ P+   YN++L A+ + G
Sbjct: 200 VSLNVQTFNVLVNGYCLEGKLEDALGMLE-----RMVSEFKVNPDNVTYNTILKAMSKKG 259

Query: 62  ELSRMENVLTDMAQEG 78
            LS ++ +L DM + G
Sbjct: 260 RLSDLKELLLDMKKNG 270

[Close]
BLAST of CsaV3_3G027490 vs. Swiss-Prot
Match: sp|Q9SNB7|PP264_ARATH (Pentatricopeptide repeat-containing protein At3g46610 OS=Arabidopsis thaliana OX=3702 GN=At3g46610 PE=2 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.0e-93
Identity = 210/317 (66.25%), Postives = 239/317 (75.39%), Query Frame = 0 

Query: 3   ELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQSGE 62
           ELPLQVF +MI+GFG+D+RL+ AVA+VDWLKRKK E+ G I PNLFIYNSLLGA++  GE
Sbjct: 143 ELPLQVFCAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGAMRGFGE 202

Query: 63  LSRMENVLTDMAQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 122
               E +L DM +EG                       XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 203 ---AEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKXXXXXXXXXXXXXXXXXXXXXX 262

Query: 123 XXXXXXXXXXGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRVCYQVMRIW 182
           XXXXXXXXXX      F VELRE+Y   EI  D   DW  EF+KLENF  R+CYQVMR W
Sbjct: 263 XXXXXXXXXXXXXXXXFFVELREKYAKREIGNDVGYDWEFEFVKLENFIGRICYQVMRRW 322

Query: 183 LVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFRIREKQCGI 242
           LVK D  +T+VL+LL  MD AG+   R E ERLIWACT  EHY V KELY RIRE+   I
Sbjct: 323 LVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEI 382

Query: 243 SLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIW 302
           SLSVCNH+IWLMGKAKKWWAALEIYEDLL++GP+PNN+SYEL+VSHFN+LL+AA KRGIW
Sbjct: 383 SLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIW 442

Query: 303 RWGVRLLNKMEEKGLRP 320
           RWGVRLLNKME+KGL+P
Sbjct: 443 RWGVRLLNKMEDKGLKP 456

[Close]
BLAST of CsaV3_3G027490 vs. TrEMBL
Match: tr|A0A0A0LB88|A0A0A0LB88_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G595200 PE=4 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 9.3e-148
Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0 

Query: 1   MVELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQS 60
           MVELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQS
Sbjct: 187 MVELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQS 246

Query: 61  GELSRMENVLTDMAQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           GELSRMENVLTDMAQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 247 GELSRMENVLTDMAQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 306

Query: 121 XXXXXXXXXXXXGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRVCYQVMR 180
           XXXXXXXXXXXXGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRVCYQVMR
Sbjct: 307 XXXXXXXXXXXXGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRVCYQVMR 366

Query: 181 IWLVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFRIREKQC 240
           IWLVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFRIREKQC
Sbjct: 367 IWLVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFRIREKQC 426

Query: 241 GISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRG 300
           GISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRG
Sbjct: 427 GISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRG 486

Query: 301 IWRWGVRLLNKMEEKGLRPGSRE 324
           IWRWGVRLLNKMEEKGLRPGSRE
Sbjct: 487 IWRWGVRLLNKMEEKGLRPGSRE 509

[Close]
BLAST of CsaV3_3G027490 vs. TrEMBL
Match: tr|A0A1S3BMS3|A0A1S3BMS3_CUCME (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g46610 OS=Cucumis melo OX=3656 GN=LOC103491748 PE=4 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 7.4e-137
Identity = 306/323 (94.74%), Postives = 309/323 (95.67%), Query Frame = 0 

Query: 1   MVELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQS 60
           MVELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQS
Sbjct: 113 MVELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQS 172

Query: 61  GELSRMENVLTDMAQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           GEL +MENVLT+MAQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 173 GELLKMENVLTEMAQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 232

Query: 121 XXXXXXXXXXXXGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRVCYQVMR 180
           XXXXXXXXXXXX          LRERY NGEIAKDDNVDWANEFLKLENFTRRVCYQVMR
Sbjct: 233 XXXXXXXXXXXXXXXXXXXXXXLRERYHNGEIAKDDNVDWANEFLKLENFTRRVCYQVMR 292

Query: 181 IWLVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFRIREKQC 240
           IWLVKGDCASTKVLQLLMEMDKAGLSLDRAE ERLIWACTCAEHYNVAKELY RIREKQC
Sbjct: 293 IWLVKGDCASTKVLQLLMEMDKAGLSLDRAEEERLIWACTCAEHYNVAKELYIRIREKQC 352

Query: 241 GISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRG 300
           GISLSVCNHVIWLMGKAKKWWAALEIYE+LLEKGPKPNNMSYELIVSHFNVLLTAAKKRG
Sbjct: 353 GISLSVCNHVIWLMGKAKKWWAALEIYEELLEKGPKPNNMSYELIVSHFNVLLTAAKKRG 412

Query: 301 IWRWGVRLLNKMEEKGLRPGSRE 324
           IWRWGVRLLNKMEEKGLRPGSRE
Sbjct: 413 IWRWGVRLLNKMEEKGLRPGSRE 435

[Close]
BLAST of CsaV3_3G027490 vs. TrEMBL
Match: tr|A0A2P4HNB5|A0A2P4HNB5_QUESU (Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_13965 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 6.5e-109
Identity = 256/323 (79.26%), Postives = 278/323 (86.07%), Query Frame = 0 

Query: 1   MVELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQS 60
           M +LP QV+SSMIRGFGRD+R+  A+A+V+WLK+KK ETNG I PNLFIYNSLLGAVKQS
Sbjct: 194 MGDLPSQVYSSMIRGFGRDKRMCSAIAVVEWLKKKKHETNGLIGPNLFIYNSLLGAVKQS 253

Query: 61  GELSRMENVLTDMAQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
            E   ME VL DM QEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 254 EEYGEMEKVLDDMTQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 313

Query: 121 XXXXXXXXXXXXGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRVCYQVMR 180
           XXXXXXXXX   GNGAL+F +E RE Y  G+I KD N DW NEF+KLEN T RVCYQVMR
Sbjct: 314 XXXXXXXXXMEDGNGALRFFIEFRENYHQGDIRKDANEDWENEFVKLENLTLRVCYQVMR 373

Query: 181 IWLVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFRIREKQC 240
            WLV G+  ST VL+LL +MD AGL L RAE ERL+WACT AEHY VAKELY +IRE+  
Sbjct: 374 RWLVNGNNLSTNVLKLLNDMDNAGLPLGRAEQERLLWACTRAEHYIVAKELYTKIRERHS 433

Query: 241 GISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRG 300
            ISLSVCNHVIWLMGKAKKWWAALEIYEDLL+KGP+PNNMS ELI+SHFNVLLTAAKKRG
Sbjct: 434 QISLSVCNHVIWLMGKAKKWWAALEIYEDLLDKGPRPNNMSQELIISHFNVLLTAAKKRG 493

Query: 301 IWRWGVRLLNKMEEKGLRPGSRE 324
           IWRWGVRLLNKMEEKGL+PGSRE
Sbjct: 494 IWRWGVRLLNKMEEKGLKPGSRE 516

[Close]
BLAST of CsaV3_3G027490 vs. TrEMBL
Match: tr|M5X5U9|M5X5U9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G095300 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 1.3e-104
Identity = 192/320 (60.00%), Postives = 224/320 (70.00%), Query Frame = 0 

Query: 3   ELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQSGE 62
           +LPLQVFSSMIRGFGRDR ++ A A+V+WLKRK  ETNG I PNLFIYNSLLGAVKQS +
Sbjct: 199 DLPLQVFSSMIRGFGRDRLMDSAFAVVEWLKRKSEETNGSITPNLFIYNSLLGAVKQSKQ 258

Query: 63  LSRMENVLTDMAQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 122
              M+ VL+ M +EG                                             
Sbjct: 259 FGEMDKVLSAMTEEGVELNVVTYNTKMAIYIEQGLSTKALDVLEDIEKKGLIPSSVSYST 318

Query: 123 XXXXXXXXXXGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRVCYQVMRIW 182
                     GNGAL+F +E RE+Y  G+I+K+   DW +EF++LENFT+RVCYQVMR W
Sbjct: 319 ALLAYQRMEDGNGALQFFIEFREKYHKGDISKESVEDWEHEFIQLENFTKRVCYQVMRRW 378

Query: 183 LVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFRIREKQCGI 242
           LVK D  ST VL+LL +MD AG+ L RAE ERL+WACT  EHY VAKELY RIRE+   I
Sbjct: 379 LVKDDNLSTNVLKLLAQMDIAGVPLSRAEHERLLWACTREEHYTVAKELYNRIRERHTEI 438

Query: 243 SLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIW 302
            +SVCNHVIWLMGKAKKWWAALEIYED+L++GPKPNNMSYELIVSHFNVLLTAA+KRGIW
Sbjct: 439 GISVCNHVIWLMGKAKKWWAALEIYEDMLDRGPKPNNMSYELIVSHFNVLLTAARKRGIW 498

Query: 303 RWGVRLLNKMEEKGLRPGSR 323
           RWG+RLLNKMEEKGL+P S+
Sbjct: 499 RWGIRLLNKMEEKGLKPRSK 518

[Close]
BLAST of CsaV3_3G027490 vs. TrEMBL
Match: tr|A0A251QDG2|A0A251QDG2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G095300 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 1.3e-104
Identity = 192/320 (60.00%), Postives = 224/320 (70.00%), Query Frame = 0 

Query: 3   ELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQSGE 62
           +LPLQVFSSMIRGFGRDR ++ A A+V+WLKRK  ETNG I PNLFIYNSLLGAVKQS +
Sbjct: 199 DLPLQVFSSMIRGFGRDRLMDSAFAVVEWLKRKSEETNGSITPNLFIYNSLLGAVKQSKQ 258

Query: 63  LSRMENVLTDMAQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 122
              M+ VL+ M +EG                                             
Sbjct: 259 FGEMDKVLSAMTEEGVELNVVTYNTKMAIYIEQGLSTKALDVLEDIEKKGLIPSSVSYST 318

Query: 123 XXXXXXXXXXGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRVCYQVMRIW 182
                     GNGAL+F +E RE+Y  G+I+K+   DW +EF++LENFT+RVCYQVMR W
Sbjct: 319 ALLAYQRMEDGNGALQFFIEFREKYHKGDISKESVEDWEHEFIQLENFTKRVCYQVMRRW 378

Query: 183 LVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFRIREKQCGI 242
           LVK D  ST VL+LL +MD AG+ L RAE ERL+WACT  EHY VAKELY RIRE+   I
Sbjct: 379 LVKDDNLSTNVLKLLAQMDIAGVPLSRAEHERLLWACTREEHYTVAKELYNRIRERHTEI 438

Query: 243 SLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIW 302
            +SVCNHVIWLMGKAKKWWAALEIYED+L++GPKPNNMSYELIVSHFNVLLTAA+KRGIW
Sbjct: 439 GISVCNHVIWLMGKAKKWWAALEIYEDMLDRGPKPNNMSYELIVSHFNVLLTAARKRGIW 498

Query: 303 RWGVRLLNKMEEKGLRPGSR 323
           RWG+RLLNKMEEKGL+P S+
Sbjct: 499 RWGIRLLNKMEEKGLKPRSK 518

The following BLAST results are available for this feature:
BLAST of CsaV3_3G027490 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011651578.11.4e-147100.00PREDICTED: pentatricopeptide repeat-containing protein At3g46610 [Cucumis sativu... [more]
XP_008450041.21.1e-13694.74PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g... [more]
XP_022928295.11.8e-13190.00pentatricopeptide repeat-containing protein At3g46610-like [Cucurbita moschata][more]
XP_022989603.15.4e-13189.69pentatricopeptide repeat-containing protein At3g46610-like [Cucurbita maxima][more]
XP_023531416.15.4e-13189.69pentatricopeptide repeat-containing protein At3g46610-like [Cucurbita pepo subsp... [more]
BLAST of CsaV3_3G027490 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G46610.15.8e-9566.25Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT5G14350.12.5e-0534.18Pentatricopeptide repeat (PPR) superfamily protein[more]
AT2G16880.16.1e-0426.32Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of CsaV3_3G027490 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SNB7|PP264_ARATH1.0e-9366.25Pentatricopeptide repeat-containing protein At3g46610 OS=Arabidopsis thaliana OX... [more]
BLAST of CsaV3_3G027490 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LB88|A0A0A0LB88_CUCSA9.3e-148100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G595200 PE=4 SV=1[more]
tr|A0A1S3BMS3|A0A1S3BMS3_CUCME7.4e-13794.74LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g46610 OS=Cu... [more]
tr|A0A2P4HNB5|A0A2P4HNB5_QUESU6.5e-10979.26Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_1... [more]
tr|M5X5U9|M5X5U9_PRUPE1.3e-10460.00Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G095300 PE=4 SV=1[more]
tr|A0A251QDG2|A0A251QDG2_PRUPE1.3e-10460.00Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G095300 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR033443PPR_long
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G027490.1CsaV3_3G027490.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 49..78
e-value: 1.1
score: 9.6
coord: 8..29
e-value: 0.44
score: 10.8
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 81..127
e-value: 1.4E-11
score: 44.2
coord: 424..473
e-value: 3.0E-15
score: 56.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 427..461
e-value: 4.5E-9
score: 33.9
coord: 358..391
e-value: 9.9E-6
score: 23.4
coord: 392..426
e-value: 0.0027
score: 15.8
coord: 83..114
e-value: 5.2E-5
score: 21.1
coord: 324..355
e-value: 3.4E-5
score: 21.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 46..80
score: 8.857
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 285..319
score: 8.495
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 460..494
score: 9.843
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 320..354
score: 9.712
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 390..424
score: 8.955
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 5..39
score: 7.925
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 425..459
score: 11.564
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 355..389
score: 10.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 243..277
score: 8.396
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 81..115
score: 10.83
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 116..146
score: 6.939
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 288..369
e-value: 3.4E-15
score: 57.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 178..287
e-value: 3.2E-10
score: 42.0
coord: 370..516
e-value: 1.9E-32
score: 115.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 2..177
e-value: 4.0E-26
score: 94.1
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 258..389
e-value: 1.2E-8
score: 34.5
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 5..527
NoneNo IPR availablePANTHERPTHR24015:SF641PENTATRICOPEPTIDE REPEAT REPEAT-CONTAINING PROTEINcoord: 5..527

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G027490CSPI03G25980Wild cucumber (PI 183967)cpicucB144
CsaV3_3G027490Cucsa.156250Cucumber (Gy14) v1cgycucB235
CsaV3_3G027490CmaCh11G014730Cucurbita maxima (Rimu)cmacucB0148
CsaV3_3G027490CmaCh14G006900Cucurbita maxima (Rimu)cmacucB0292
CsaV3_3G027490CmoCh11G016450Cucurbita moschata (Rifu)cmocucB0126
CsaV3_3G027490CmoCh14G007050Cucurbita moschata (Rifu)cmocucB0284
CsaV3_3G027490Cp4.1LG03g07070Cucurbita pepo (Zucchini)cpecucB0760
CsaV3_3G027490Cp4.1LG04g05760Cucurbita pepo (Zucchini)cpecucB0837
CsaV3_3G027490CsGy3G024330Cucumber (Gy14) v2cgybcucB117
CsaV3_3G027490Carg15589Silver-seed gourdcarcucB0399
CsaV3_3G027490Carg09689Silver-seed gourdcarcucB0467
CsaV3_3G027490MELO3C014826Melon (DHL92) v3.5.1cucmeB250
CsaV3_3G027490ClCG05G013040Watermelon (Charleston Gray)cucwcgB240
CsaV3_3G027490Lsi05G004780Bottle gourd (USVL1VR-Ls)cuclsiB233
CsaV3_3G027490MELO3C014826.2Melon (DHL92) v3.6.1cucmedB233
CsaV3_3G027490Bhi01G001561Wax gourdcucwgoB289
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G027490Melon (DHL92) v3.6.1cucmedB187
CsaV3_3G027490Watermelon (Charleston Gray)cucwcgB255
CsaV3_3G027490Watermelon (97103) v1cucwmB289
CsaV3_3G027490Watermelon (97103) v2cucwmbB219
CsaV3_3G027490Watermelon (97103) v2cucwmbB234
CsaV3_3G027490Cucumber (Chinese Long) v3cuccucB017
CsaV3_3G027490Cucumber (Gy14) v2cgybcucB026
CsaV3_3G027490Cucurbita maxima (Rimu)cmacucB0146
CsaV3_3G027490Cucurbita moschata (Rifu)cmocucB0128
CsaV3_3G027490Cucurbita pepo (Zucchini)cpecucB0754
CsaV3_3G027490Cucurbita pepo (Zucchini)cpecucB0844
CsaV3_3G027490Wild cucumber (PI 183967)cpicucB028
CsaV3_3G027490Bottle gourd (USVL1VR-Ls)cuclsiB247
CsaV3_3G027490Melon (DHL92) v3.5.1cucmeB196