BLAST of Cp4.1LG04g05760 vs. Swiss-Prot
Match:
PP264_ARATH (Pentatricopeptide repeat-containing protein At3g46610 OS=Arabidopsis thaliana GN=At3g46610 PE=2 SV=1)
HSP 1 Score: 771.9 bits (1992), Expect = 6.0e-222
Identity = 391/655 (59.69%), Postives = 485/655 (74.05%), Query Frame = 1
Query: 58 CYENSKFDCNFEFRHGCSKLRVARLMKPKRNSLGVWFLSAWAIEQPTIDGEVVRVQSNSG 117
C+ +S +F F S +V L +PKR+ LG F WA EQ ++ V +
Sbjct: 46 CFGSSSSISSFIFVS--SNRKVLFLCEPKRSLLGSSFGVGWATEQRELELGEEEVSTE-- 105
Query: 118 DDFPEKSLDWDDHDHNSVNGENSNGRSFKDEEGIEGEGDGDVKVDVRALAGRLELARTVD 177
D +S NG N +++VDVR LA L A+T D
Sbjct: 106 -------------DLSSANGGEKN----------------NLRVDVRELAFSLRAAKTAD 165
Query: 178 DVEEVLKDVGELPLQVFSSLIKGFGRDKRLGCAMALVEWLKTRKIETNGRITPNLFIYNS 237
DV+ VLKD GELPLQVF ++IKGFG+DKRL A+A+V+WLK +K E+ G I PNLFIYNS
Sbjct: 166 DVDAVLKDKGELPLQVFCAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNS 225
Query: 238 LLGAVKQSGEFSKMEDILNDMSQEGIVSNVVTYNTIMSIYLDQGLPMKALDILEEMPKKG 297
LLGA++ GE K IL DM +EGIV N+VTYNT+M IY+++G +KAL IL+ +KG
Sbjct: 226 LLGAMRGFGEAEK---ILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKG 285
Query: 298 LTLSPVSYSTTLRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWDDEFLKLENFTR 357
+P++YST L YRRM+DG GAL+F VELRE+Y EI D DW+ EF+KLENF
Sbjct: 286 FEPNPITYSTALLVYRRMEDGMGALEFFVELREKYAKREIGNDVGYDWEFEFVKLENFIG 345
Query: 358 RVCYQVMRIWLVKGDSASTKVLQLLTEMDKAGLSLDRAEEERLVWACTCAEHHNVAKELY 417
R+CYQVMR WLVK D+ +T+VL+LL MD AG+ R E ERL+WACT EH+ V KELY
Sbjct: 346 RICYQVMRRWLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELY 405
Query: 418 YRIREKKSGISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSYELIVSHFNVL 477
RIRE+ S ISLSVCNH+IWLMGKAKKWWAALEIYEDLL++GP+PNNLSYEL+VSHFN+L
Sbjct: 406 KRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNIL 465
Query: 478 LTAAKNRGIWRWGVRLLNKMEEKGLKPGIREWNAVLVACSRAAETSMAIEIFRRMIDQGE 537
L+AA RGIWRWGVRLLNKME+KGLKP R WNAVLVACS+A+ET+ AI+IF+ M+D GE
Sbjct: 466 LSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGE 525
Query: 538 KPTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVAPNIYAYTTMASVFTGQGKFNMVEL 597
KPTV+SYGALLSALEKGKLYDEA VW+HMIKVG+ PN+YAYTTMASV TGQ KFN+++
Sbjct: 526 KPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDT 585
Query: 598 TINDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALA 657
+ +M + GIEP+VVT+NA+I+GC RNG+S VAYEWFHRMK N+ PNE++YE+LIEALA
Sbjct: 586 LLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALA 645
Query: 658 KDGKPRLAYELYMKANNESLNLSSKIYDAVIHSSQVYGASIDISLLGPRPPDENK 713
D KPRLAYEL++KA NE L LSSK YDAV+ S++ YGA+ID++LLGPRP +N+
Sbjct: 646 NDAKPRLAYELHVKAQNEGLKLSSKPYDAVVKSAETYGATIDLNLLGPRPDKKNR 664
BLAST of Cp4.1LG04g05760 vs. Swiss-Prot
Match:
PPR28_ARATH (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1)
HSP 1 Score: 137.9 bits (346), Expect = 4.4e-31
Identity = 113/483 (23.40%), Postives = 220/483 (45.55%), Query Frame = 1
Query: 195 SSLIKGFGRDKRLGCAMALVEWLKTRKIETNGRITPNLFIYNSLLGAVKQSGEFSKMEDI 254
++LI+GF R + A ++E L E +G + P++ YN ++ ++GE + +
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEIL-----EGSGAV-PDVITYNVMISGYCKAGEINNALSV 200
Query: 255 LNDMSQEGIVSNVVTYNTIMSIYLDQGLPMKALDILEEMPKKGLTLSPVSYSTTLRAYRR 314
L+ MS + +VVTYNTI+ D G +A+++L+ M ++ ++Y+ + A R
Sbjct: 201 LDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 260
Query: 315 MKDGNGALKFMVELRERYRNGEIAKDDNVDWDDEFLKLENFTRRVCYQVMRIWLVKGDSA 374
A+K + E+R+R ++ V Y V+ + K +
Sbjct: 261 DSGVGHAMKLLDEMRDRGCTPDV---------------------VTYNVLVNGICK-EGR 320
Query: 375 STKVLQLLTEMDKAGLSLDRAEEERLVWACTCAEHHNVAKELYYRIREKKSGISLSVCNH 434
+ ++ L +M +G + ++ + A++L + K S+ N
Sbjct: 321 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 380
Query: 435 VIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSYELIVSHFNVLLTAAKNRGIWRWGVRLL 494
+I + + A++I E + + G +PN+LSY ++ F K + + R + L
Sbjct: 381 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF------CKEKKMDR-AIEYL 440
Query: 495 NKMEEKGLKPGIREWNAVLVACSRAAETSMAIEIFRRMIDQGEKPTVLSYGALLSALEKG 554
+M +G P I +N +L A + + A+EI ++ +G P +++Y ++ L K
Sbjct: 441 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 500
Query: 555 KLYDEARSVWDHMIKVGVAPNIYAYTTMASVFTGQGKFNMVELTINDMVASGIEPTVVTY 614
+A + D M + P+ Y+++ + +GK + ++ GI P VT+
Sbjct: 501 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF 560
Query: 615 NAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKDGKPRLAYELYMKANN 674
N+I+ G ++ + A ++ M R PNE SY +LIE LA +G + A EL + N
Sbjct: 561 NSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCN 585
Query: 675 ESL 678
+ L
Sbjct: 621 KGL 585
BLAST of Cp4.1LG04g05760 vs. Swiss-Prot
Match:
PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)
HSP 1 Score: 130.2 bits (326), Expect = 9.1e-29
Identity = 122/529 (23.06%), Postives = 224/529 (42.34%), Query Frame = 1
Query: 173 ARTVDD-----VEEVLKDVGEL---PLQVFSSLIKGFGRDKRLGCAMALVEWLKTRKIET 232
A+T+DD V + L++ +L VF ++K + R + A+++V +
Sbjct: 108 AKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGF-- 167
Query: 233 NGRITPNLFIYNSLLGA-VKQSGEFSKMEDILNDMSQEGIVSNVVTYNTIMSIYLDQGLP 292
P + YN++L A ++ S E++ +M + + NV TYN ++ + G
Sbjct: 168 ----MPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNI 227
Query: 293 MKALDILEEMPKKGLTLSPVSYSTTLRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNV 352
AL + ++M KG + V+Y+T + Y +++ + K + + + +
Sbjct: 228 DVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNL------ 287
Query: 353 DWDDEFLKLENFTRRVCYQVMRIWLVKGDSASTKVLQLLTEMDKAGLSLDRAEEERLVWA 412
+ Y V+ L + + +V +LTEM++ G SLD L+
Sbjct: 288 ---------------ISYNVVINGLCR-EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 347
Query: 413 CTCAEHHNVAKELYYRIREKKSGISLSVCNH--VIWLMGKAKKWWAALEIYEDLLEKGPK 472
C E N + L + G++ SV + +I M KA A+E + + +G
Sbjct: 348 Y-CKEG-NFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC 407
Query: 473 PNNLSYELIVSHFNVLLTAAKNRGIWRWGVRLLNKMEEKGLKPGIREWNAVLVACSRAAE 532
PN +Y +V F+ +G R+L +M + G P + +NA++ +
Sbjct: 408 PNERTYTTLVDGFS-------QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 467
Query: 533 TSMAIEIFRRMIDQGEKPTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVAPNIYAYTT 592
AI + M ++G P V+SY +LS + DEA V M++ G+ P+ Y++
Sbjct: 468 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 527
Query: 593 MASVFTGQGKFNMVELTINDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRN 652
+ F Q + +M+ G+ P TY A+I G A + + M +
Sbjct: 528 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 587
Query: 653 ISPNEVSYELLIEALAKDGKPRLAYELYMKANNESLNLSSKIYDAVIHS 691
+ P+ V+Y +LI L K + R A L +K E S Y +I +
Sbjct: 588 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
BLAST of Cp4.1LG04g05760 vs. Swiss-Prot
Match:
RF1_ORYSI (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=1)
HSP 1 Score: 129.8 bits (325), Expect = 1.2e-28
Identity = 113/526 (21.48%), Postives = 232/526 (44.11%), Query Frame = 1
Query: 174 RTVDDVEEVLKDVGELPL--QVFSS--LIKGFGRDKRLGCAMALVEWLKTRKIETNGRIT 233
RT D ++ VL+ + EL VFS L+KG + R A+ L+ + + G
Sbjct: 137 RTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMAD---DRGGGSP 196
Query: 234 PNLFIYNSLLGAVKQSGEFSKMEDILNDMSQEGIVSNVVTYNTIMSIYLDQGLPMKALDI 293
P++ Y +++ + G+ K ++M GI+ +VVTYN+I++ KA+++
Sbjct: 197 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEV 256
Query: 294 LEEMPKKGLTLSPVSYSTTLRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWDDEF 353
L M K G+ ++Y++ L Y A+ F+ ++R D V+ D
Sbjct: 257 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR----------SDGVEPD--- 316
Query: 354 LKLENFTRRVCYQVMRIWLVKGDSASTKVLQLLTEMDKAGLSLDRAEEERLVWAC----T 413
V Y ++ +L K + + ++ M K GL + L+
Sbjct: 317 --------VVTYSLLMDYLCK-NGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 376
Query: 414 CAEHHNVAKELYYR--IREKKSGISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPN 473
E H + +L R I S+ +C + K K A+ ++ + ++G PN
Sbjct: 377 LVEMHGLL-DLMVRNGIHPDHYVFSILICAY-----AKQGKVDQAMLVFSKMRQQGLNPN 436
Query: 474 NLSYELIVSHFNVLLTAAKNRGIWRWGVRLLNKMEEKGLKPGIREWNAVLVACSRAAETS 533
++Y ++ +L + + + +M ++GL PG +N+++ +
Sbjct: 437 AVTYGAVI---GILCKSGRVED----AMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWE 496
Query: 534 MAIEIFRRMIDQGEKPTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVAPNIYAYTTMA 593
A E+ M+D+G + + +++ + K E+ +++ M+++GV PN+ Y T+
Sbjct: 497 RAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLI 556
Query: 594 SVFTGQGKFNMVELTINDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNIS 653
+ + GK + ++ MV+ G++P VTY+ +I G + A F M+ +S
Sbjct: 557 NGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVS 616
Query: 654 PNEVSYELLIEALAKDGKPRLAYELYMKANNESLNLSSKIYDAVIH 690
P+ ++Y ++++ L + + A ELY++ + Y+ ++H
Sbjct: 617 PDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILH 624
BLAST of Cp4.1LG04g05760 vs. Swiss-Prot
Match:
PP432_ARATH (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana GN=At5g55840 PE=3 SV=2)
HSP 1 Score: 129.4 bits (324), Expect = 1.6e-28
Identity = 118/472 (25.00%), Postives = 190/472 (40.25%), Query Frame = 1
Query: 194 FSSLIKGFGRDKRLGCAMALVEWLKTRKIETNGRITPNLFIYNSLLGAVKQSGEFSKMED 253
++ LI R R+ L+ ++ R I PN YN+L+ G+
Sbjct: 266 YNMLIHDLCRSNRIAKGYLLLRDMRKRMIH------PNEVTYNTLINGFSNEGKVLIASQ 325
Query: 254 ILNDMSQEGIVSNVVTYNTIMSIYLDQGLPMKALDILEEMPKKGLTLSPVSYSTTLRAYR 313
+LN+M G+ N VT+N ++ ++ +G +AL + M KGLT S VSY L
Sbjct: 326 LLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 385
Query: 314 RMKDGNGALKFMVELRERYRNGEIAKDDNVDWDDEFLKLENFTRRVCYQVMRIWLVKGDS 373
+ + + A F + ++ RNG R+ Y M L K
Sbjct: 386 KNAEFDLARGFYMRMK---RNGVCVG------------------RITYTGMIDGLCKNGF 445
Query: 374 ASTKVLQLLTEMDKAGLSLDRAEEERLVWACTCAEHHNVAKELY---YRIREKKSGISLS 433
V+ LL EM K G+ D L+ AKE+ YR+ +GI S
Sbjct: 446 LDEAVV-LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 505
Query: 434 VCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSYELIVSHFNVLLTAAKNRGIWRWG 493
+ MG K+ A+ IYE ++ +G ++ + FNVL+T+ G
Sbjct: 506 TLIYNCCRMGCLKE---AIRIYEAMILEGHTRDHFT-------FNVLVTSLCKAGKVAEA 565
Query: 494 VRLLNKMEEKGLKPGIREWNAVLVACSRAAETSMAIEIFRRMIDQGEKPTVLSYGALLSA 553
+ M G+ P ++ ++ + E A +F M G PT +YG+LL
Sbjct: 566 EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKG 625
Query: 554 LEKGKLYDEARSVWDHMIKVGVAPNIYAYTTMASVFTGQGKFNMVELTINDMVASGIEPT 613
L KG EA + V A + Y T+ + G +MV I P
Sbjct: 626 LCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD 685
Query: 614 VVTYNAIITGCVRNGMSSVAYEWFHRMKVR-NISPNEVSYELLIEALAKDGK 662
TY ++I+G R G + +A + + R N+ PN+V Y ++ + K G+
Sbjct: 686 SYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQ 699
BLAST of Cp4.1LG04g05760 vs. TrEMBL
Match:
A0A0A0LB88_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G595200 PE=4 SV=1)
HSP 1 Score: 1197.6 bits (3097), Expect = 0.0e+00
Identity = 599/717 (83.54%), Postives = 651/717 (90.79%), Query Frame = 1
Query: 1 MSILSDWCPSS-SGLELGSYSVVNGSRKRINCARFSGC-CGNGGFALIPFSSSVLRCGFC 60
M LS+WCP+S SG+ELGSYSVV+ S KR+ FS C CGN GF+LI F+ SVLR GFC
Sbjct: 1 MHALSNWCPTSCSGVELGSYSVVHRSWKRVKSFGFSDCRCGNWGFSLISFNLSVLRSGFC 60
Query: 61 YENSKFDCNFEFRHGCSKLRVARLMKPKRNSLGVWFLSAWAIEQPTIDGEVVRVQSNSGD 120
YENS+F CN EFRHGCSKLRV LMK RNSLG + LSAWA+EQPTID E+ RV+SNS D
Sbjct: 61 YENSRFVCNCEFRHGCSKLRVVPLMKTNRNSLGAFCLSAWAVEQPTIDDEITRVESNSRD 120
Query: 121 DFPEKSLDWDDHDHNSVNGENSNGR-SFKDEEGIEGEGDGDVKVDVRALAGRLELARTVD 180
PE+ LDWDD D VNGENS+G SFKDE +EG GDV+VDVRALA +L+LART D
Sbjct: 121 GLPERGLDWDDDDDGKVNGENSHGGGSFKDEGELEGV--GDVRVDVRALAAQLQLARTAD 180
Query: 181 DVEEVLKDVGELPLQVFSSLIKGFGRDKRLGCAMALVEWLKTRKIETNGRITPNLFIYNS 240
DV++VLKD+ ELPLQVFSS+I+GFGRD+RL CA+ALV+WLK +KIETNGRI PNLFIYNS
Sbjct: 181 DVDQVLKDMVELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNS 240
Query: 241 LLGAVKQSGEFSKMEDILNDMSQEGIVSNVVTYNTIMSIYLDQGLPMKALDILEEMPKKG 300
LLGAVKQSGE S+ME++L DM+QEGIVSNVVTYNTIMSIYL+QGL MKAL ILEEMPKKG
Sbjct: 241 LLGAVKQSGELSRMENVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAMKALGILEEMPKKG 300
Query: 301 LTLSPVSYSTTLRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWDDEFLKLENFTR 360
LTLSPVSYST LRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDW +EFLKLENFTR
Sbjct: 301 LTLSPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTR 360
Query: 361 RVCYQVMRIWLVKGDSASTKVLQLLTEMDKAGLSLDRAEEERLVWACTCAEHHNVAKELY 420
RVCYQVMRIWLVKGD ASTKVLQLL EMDKAGLSLDRAE ERL+WACTCAEH+NVAKELY
Sbjct: 361 RVCYQVMRIWLVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELY 420
Query: 421 YRIREKKSGISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSYELIVSHFNVL 480
+RIREK+ GISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNN+SYELIVSHFNVL
Sbjct: 421 FRIREKQCGISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVL 480
Query: 481 LTAAKNRGIWRWGVRLLNKMEEKGLKPGIREWNAVLVACSRAAETSMAIEIFRRMIDQGE 540
LTAAK RGIWRWGVRLLNKMEEKGL+PG REWNAVLVACSRAAETS AI+IFR+M++QGE
Sbjct: 481 LTAAKKRGIWRWGVRLLNKMEEKGLRPGSREWNAVLVACSRAAETSAAIDIFRKMVEQGE 540
Query: 541 KPTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVAPNIYAYTTMASVFTGQGKFNMVEL 600
KPTVLSYGALLSALEKGKLYDEARSVWDHMI+VGV PNIYAYTTMASVFTGQGKFNMVE+
Sbjct: 541 KPTVLSYGALLSALEKGKLYDEARSVWDHMIRVGVEPNIYAYTTMASVFTGQGKFNMVEV 600
Query: 601 TINDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALA 660
TINDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALA
Sbjct: 601 TINDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALA 660
Query: 661 KDGKPRLAYELYMKANNESLNLSSKIYDAVIHSSQVYGASIDISLLGPRPPDENKSS 715
K+GKPRLAYELYM+A +E LNLSSK+YDAVI SSQ+YGAS++I LLG RPPD NKSS
Sbjct: 661 KEGKPRLAYELYMRAKDEGLNLSSKVYDAVIESSQLYGASVNIKLLGLRPPDRNKSS 715
BLAST of Cp4.1LG04g05760 vs. TrEMBL
Match:
A0A061EDB6_THECC (Pentatricopeptide repeat (PPR-like) superfamily protein, putative OS=Theobroma cacao GN=TCM_017045 PE=4 SV=1)
HSP 1 Score: 858.6 bits (2217), Expect = 5.4e-246
Identity = 433/699 (61.95%), Postives = 529/699 (75.68%), Query Frame = 1
Query: 15 ELGSY---SVVNGSRKRINCARFSGCCGNGGFALIPFSSSVLRCGFCYENSKFDCNFEFR 74
ELGS S SRK + A G F L+ S R G CY N F
Sbjct: 22 ELGSSCFASTKPSSRKTWSLAESRG----PSFLLLSSYSRFSRSGTCYRNLNCSLRCGFL 81
Query: 75 HGCSKLRVARLMKPKRNSLGVWFLSAWAIEQPTIDGEVVRVQSNSGDDFPEKSLDWDDHD 134
S+L+V +PKR S AWA+EQ I E+ R +S+S D D + D
Sbjct: 82 CWYSELKVVLFCEPKRGSSRGLVALAWALEQQEIGNELEREESHSRDG------DNGNED 141
Query: 135 HNSVNGENSNGRSFKDEEGIEGEGDGDVKVDVRALAGRLELARTVDDVEEVLKDVGELPL 194
N +S G E E + ++DVRALA L+ A+T DD+E+VLKD+ ELPL
Sbjct: 142 KNEEMDASSEG---------EVELEESARLDVRALASSLQFAKTADDIEKVLKDMDELPL 201
Query: 195 QVFSSLIKGFGRDKRLGCAMALVEWLKTRKIETNGRITPNLFIYNSLLGAVKQSGEFSKM 254
QV SS+IKGFGRD + AMALVEWLK +K ++ G + PNLFIYNSLLGAVK S +F +M
Sbjct: 202 QVHSSMIKGFGRDNYMDAAMALVEWLKRKKNDSGGSVGPNLFIYNSLLGAVKHSKQFREM 261
Query: 255 EDILNDMSQEGIVSNVVTYNTIMSIYLDQGLPMKALDILEEMPKKGLTLSPVSYSTTLRA 314
E IL DM +EG++ N+VTYN +M+IYL+QG KAL++LEE+ +KG + SPVSYST L A
Sbjct: 262 EKILKDMEEEGVIPNIVTYNVLMAIYLEQGEATKALNVLEEIQEKGFSPSPVSYSTALLA 321
Query: 315 YRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWDDEFLKLENFTRRVCYQVMRIWLVKG 374
YRRM+DGNGALKF +ELRE+Y G++ KD + +W+ EF+KLENFT R+C QVMR WLVK
Sbjct: 322 YRRMEDGNGALKFFIELREKYVKGDLGKDADENWEYEFVKLENFTVRICQQVMRRWLVKD 381
Query: 375 DSASTKVLQLLTEMDKAGLSLDRAEEERLVWACTCAEHHNVAKELYYRIREKKSGISLSV 434
++ ST VL+LL +MD AGL L + + ER++WACTC EH+ VAKELY RIRE+ S ISLSV
Sbjct: 382 ENLSTNVLKLLRDMDNAGLKLSKEDYERIIWACTCEEHYVVAKELYSRIRERHSEISLSV 441
Query: 435 CNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSYELIVSHFNVLLTAAKNRGIWRWGV 494
CNH+IWLMGKAKKWWAALE+YE+LL+KGP PNNLSYEL++SHFN+LLTAA+ RGIWRWGV
Sbjct: 442 CNHLIWLMGKAKKWWAALEVYEELLDKGPSPNNLSYELVMSHFNILLTAARKRGIWRWGV 501
Query: 495 RLLNKMEEKGLKPGIREWNAVLVACSRAAETSMAIEIFRRMIDQGEKPTVLSYGALLSAL 554
RLLNKME+KGLKPG REWNAVLVACS+A+ET+ A++IFRRM++QGEKPT++SYGALLSAL
Sbjct: 502 RLLNKMEDKGLKPGSREWNAVLVACSKASETTAAVQIFRRMVEQGEKPTIISYGALLSAL 561
Query: 555 EKGKLYDEARSVWDHMIKVGVAPNIYAYTTMASVFTGQGKFNMVELTINDMVASGIEPTV 614
EKGKLYDEA VWDHMIKVGV PN+YAYT MAS+ TG+G F MV +M +SGIEPTV
Sbjct: 562 EKGKLYDEALRVWDHMIKVGVKPNLYAYTIMASIVTGKGNFRMVNAVFQEMASSGIEPTV 621
Query: 615 VTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKDGKPRLAYELYMK 674
VTYNAII+GC RNGMSS AYEWFHRMKV+NISPNE++Y++LIEALAKDGKPRLAYELY++
Sbjct: 622 VTYNAIISGCARNGMSSAAYEWFHRMKVQNISPNEITYQMLIEALAKDGKPRLAYELYLR 681
Query: 675 ANNESLNLSSKIYDAVIHSSQVYGASIDISLLGPRPPDE 711
A+NE LNLSSK YDAV+ SSQVYGA+ D+S+LGPRPPD+
Sbjct: 682 AHNEGLNLSSKAYDAVVQSSQVYGATTDLSVLGPRPPDK 701
BLAST of Cp4.1LG04g05760 vs. TrEMBL
Match:
V4U3G6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014357mg PE=4 SV=1)
HSP 1 Score: 858.6 bits (2217), Expect = 5.4e-246
Identity = 430/681 (63.14%), Postives = 532/681 (78.12%), Query Frame = 1
Query: 40 NGGFALIPFSSSVLRCGFCYENSKFDCNFEFRHGCSKLRVARLMKPKRNSLGVWFLSAWA 99
N GF L+ +S+ CG C + K D EF G S ++ +PK++ G + AW+
Sbjct: 50 NTGFLLVSSNSTFSCCGVCCRSIKLDSKCEFLSGFSSHKLVLFCEPKKSYFGASVMFAWS 109
Query: 100 IEQPTIDGEVVRVQSNSGDDFPEKSLDWDDHDHNSVN-----GENSNGRSFKDEEGIEGE 159
+EQ I ++ + NS D ++ + D D+ SV+ G+N N ++ E I
Sbjct: 110 MEQQEIGNGLLVEEPNSADGLLVET-ESDIVDYRSVHRVEDTGDNGNQVESEEVEIIGER 169
Query: 160 GDGDVK---VDVRALAGRLELARTVDDVEEVLKDVGELPLQVFSSLIKGFGRDKRLGCAM 219
G G K VDV+ALA L +T DDVEEVLKD+GELP QV SS+I+GFG++KR CAM
Sbjct: 170 GVGKQKSGRVDVKALAQSLWHTKTADDVEEVLKDMGELPPQVHSSMIRGFGKEKRTDCAM 229
Query: 220 ALVEWLKTRKIETNGRITPNLFIYNSLLGAVKQSGEFSKMEDILNDMSQEGIVSNVVTYN 279
ALVEWLK +K ET G I PNLF+YNSLLGAVKQS +F +M+ I+NDM++EG+ NVVTYN
Sbjct: 230 ALVEWLKRKKRETGGFIGPNLFVYNSLLGAVKQSQKFEEMDRIMNDMAEEGVNPNVVTYN 289
Query: 280 TIMSIYLDQGLPMKALDILEEMPKKGLTLSPVSYSTTLRAYRRMKDGNGALKFMVELRER 339
T+M+IY++QG KAL++LEE+ KKGLT S VSYS L AYRRM+DGNGALKF VELRE+
Sbjct: 290 TLMAIYIEQGEGTKALNVLEEIKKKGLTPSAVSYSQALLAYRRMEDGNGALKFFVELREK 349
Query: 340 YRNGEIAKDDNVDWDDEFLKLENFTRRVCYQVMRIWLVKGDSASTKVLQLLTEMDKAGLS 399
Y GEI K D+ +W++EF+KL++F R+CYQVMR WLVK ++ ST VL+LL EMDKAGL
Sbjct: 350 YLKGEIGKGDDENWENEFVKLKDFIIRICYQVMRRWLVKDENLSTNVLKLLIEMDKAGLR 409
Query: 400 LDRAEEERLVWACTCAEHHNVAKELYYRIREKKSGISLSVCNHVIWLMGKAKKWWAALEI 459
+AE ERLVWACT EH+ VAKE Y RIRE+ ISLSVCNH+IWLMGKAKKWWAALE+
Sbjct: 410 PVKAEYERLVWACTREEHYVVAKEFYARIRERHDEISLSVCNHLIWLMGKAKKWWAALEV 469
Query: 460 YEDLLEKGPKPNNLSYELIVSHFNVLLTAAKNRGIWRWGVRLLNKMEEKGLKPGIREWNA 519
YEDLL+KGPKPNN+SYELIVSHFN+LL+AA+ RGIWRWGVRLLNKMEEKGLKPG REWNA
Sbjct: 470 YEDLLDKGPKPNNMSYELIVSHFNILLSAARKRGIWRWGVRLLNKMEEKGLKPGSREWNA 529
Query: 520 VLVACSRAAETSMAIEIFRRMIDQGEKPTVLSYGALLSALEKGKLYDEARSVWDHMIKVG 579
VLVACS+A+E + A++IF+RM+++GEKPT++SYGALLSALEKGKLYDEA VW HM+ VG
Sbjct: 530 VLVACSKASEYNAAVQIFKRMVEKGEKPTIISYGALLSALEKGKLYDEASRVWQHMLNVG 589
Query: 580 VAPNIYAYTTMASVFTGQGKFNMVELTINDMVASGIEPTVVTYNAIITGCVRNGMSSVAY 639
PN+YAYT MAS+FT QGKFN+VEL +M +S IEPTVVTYNAII+ C +NGMSS AY
Sbjct: 590 AEPNLYAYTIMASIFTAQGKFNLVELIFREMASSRIEPTVVTYNAIISACGQNGMSSAAY 649
Query: 640 EWFHRMKVRNISPNEVSYELLIEALAKDGKPRLAYELYMKANNESLNLSSKIYDAVIHSS 699
EWFHRMKV+NISPNE++YE+LIEALAKDGKPRLAY+LY++A NE LNLSSK YDA++ S
Sbjct: 650 EWFHRMKVQNISPNEITYEMLIEALAKDGKPRLAYDLYLRARNEELNLSSKAYDAILEFS 709
Query: 700 QVYGASIDISLLGPRPPDENK 713
QVYGA+ID+++LGPRPPD+ K
Sbjct: 710 QVYGATIDLTVLGPRPPDKKK 729
BLAST of Cp4.1LG04g05760 vs. TrEMBL
Match:
A0A067LGA6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10203 PE=4 SV=1)
HSP 1 Score: 851.3 bits (2198), Expect = 8.6e-244
Identity = 446/731 (61.01%), Postives = 546/731 (74.69%), Query Frame = 1
Query: 1 MSILSDWCPSSSGL--------ELGSYSVVNGSR-KRINCARFSGCCGNGGFALIPFSSS 60
M +LS W PS GL ELGS+ + R KR + G ++ +S
Sbjct: 1 MQVLSMW-PSKGGLSMVPQLDFELGSHYFPSIRREKRWGLVDIAFHGKTSGLLMVSSNSR 60
Query: 61 VLRCGFCYENSKFDCNFEFRHGCSKLRVARLMKPKRNSLGVWFLSAWAIEQPTIDGEVVR 120
R G C +S F N CSKL+ A +PK+ S G A A+EQ I +
Sbjct: 61 YDRNGTCVNSSGFLSN------CSKLKFALFCEPKKGSSGSSVAMASALEQQQIGNKFHG 120
Query: 121 VQSNSGDDFPEKS--LDWDDH--------DHNSVNGENSNGRSFKDEEGIEGEGDGDVKV 180
+S+ D FP KS ++ D H D ++ N E ++ F EE + E D ++
Sbjct: 121 GESSLDDGFPGKSEMVNIDSHNLNRLENSDDDNCNLEENSHLDFGSEEEVREEKD--TRI 180
Query: 181 DVRALAGRLELARTVDDVEEVLKDVGELPLQVFSSLIKGFGRDKRLGCAMALVEWLKTRK 240
DVRALA L A + DDVEEVLKD GELPLQV+SS+IKGFG DK++ A ALVEWLK RK
Sbjct: 181 DVRALALSLHSAESADDVEEVLKDKGELPLQVYSSMIKGFGWDKKMASAFALVEWLK-RK 240
Query: 241 IETNGRITPNLFIYNSLLGAVKQSGEFSKMEDILNDMSQEGIVSNVVTYNTIMSIYLDQG 300
ET I PNLFIYNSLL A+KQS + + E ILNDM+QEGI NVVTYNT+M IY++QG
Sbjct: 241 KETGSIIGPNLFIYNSLLSALKQSEQHEETEKILNDMAQEGIFPNVVTYNTLMGIYVEQG 300
Query: 301 LPMKALDILEEMPKKGLTLSPVSYSTTLRAYRRMKDGNGALKFMVELRERYRNGEIAKDD 360
P KALDILEE+ K G T S SYST L AYR+M+DGNGAL F V+++E+Y+ GEI KD
Sbjct: 301 QPTKALDILEEIHKNGFTPSAASYSTALLAYRKMEDGNGALAFYVDIKEKYKKGEIGKDS 360
Query: 361 NVDWDDEFLKLENFTRRVCYQVMRIWLVKGDSASTKVLQLLTEMDKAGLSLDRAEEERLV 420
+ +W+ EF+KLENF R+CYQVMR WLV+ D+ S VL+LLT+MDKAGL RA+ ERL+
Sbjct: 361 DENWEKEFVKLENFIIRICYQVMRRWLVRHDNFSINVLKLLTDMDKAGLKPGRADYERLL 420
Query: 421 WACTCAEHHNVAKELYYRIREKKSGISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPK 480
WACT EH+ VAKELY RIRE+ S ISLSVCNHVIWLMGKAKKWWAALEIYEDLL+KGP+
Sbjct: 421 WACTREEHYIVAKELYSRIRERYSEISLSVCNHVIWLMGKAKKWWAALEIYEDLLDKGPR 480
Query: 481 PNNLSYELIVSHFNVLLTAAKNRGIWRWGVRLLNKMEEKGLKPGIREWNAVLVACSRAAE 540
PNNLS+ELIVSHFNVLLTAA+ RGIWRWGVRLLNKME+KGLKPG REWNAVLVACS+A+E
Sbjct: 481 PNNLSHELIVSHFNVLLTAARKRGIWRWGVRLLNKMEDKGLKPGSREWNAVLVACSKASE 540
Query: 541 TSMAIEIFRRMIDQGEKPTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVAPNIYAYTT 600
TS AI+IF RMI+QGEKPT++SYGALLSALEKGKLY+EA VW+HM+KVGV PN+YAYT
Sbjct: 541 TSAAIQIFSRMIEQGEKPTIISYGALLSALEKGKLYNEAVRVWEHMLKVGVKPNVYAYTI 600
Query: 601 MASVFTGQGKFNMVELTINDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRN 660
MASV+ GQGKF V+ I++M +S IEPT++TYNAII+GCV+N MS AYEWFHRMKV+N
Sbjct: 601 MASVYAGQGKFGHVDAIIHEMTSSSIEPTIITYNAIISGCVQNSMSGAAYEWFHRMKVQN 660
Query: 661 ISPNEVSYELLIEALAKDGKPRLAYELYMKANNESLNLSSKIYDAVIHSSQVYGASIDIS 713
ISPN+++YE+LIEALAKDGKPR+AYELY++A NE L+LS+K+YDAV+HSS ++GA++DI+
Sbjct: 661 ISPNKITYEMLIEALAKDGKPRIAYELYLRAQNEGLDLSAKVYDAVVHSSHIFGATVDIN 720
BLAST of Cp4.1LG04g05760 vs. TrEMBL
Match:
A0A0D2V3F1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G091600 PE=4 SV=1)
HSP 1 Score: 845.5 bits (2183), Expect = 4.7e-242
Identity = 437/719 (60.78%), Postives = 531/719 (73.85%), Query Frame = 1
Query: 1 MSILSDWCPSSSG------LELGSYSVVNGSRKRINCARFSGCCGNG-GFALIPFSSSVL 60
M LS W PS G L+ S S K + ++S G G F L+ +
Sbjct: 1 MQALSIW-PSHGGSLVVPHLDFEHGSSCFASIKPRSRKKWSLIDGRGHSFLLLSSYARFS 60
Query: 61 RCGFCYENSKFDCNFEFRHGCSKLRVARLMKPKRNSLGVWFLSAWAIEQPTIDGEVVRVQ 120
R C N FEF SKL+V +PK S SAWA+E+ E+ R
Sbjct: 61 RSETCCRNLNCCLRFEFLCCYSKLKVVLFCEPKGGSSSGLVASAWALERQETGNELEREG 120
Query: 121 SNSGDDFPEKSLDWDDHDHNSVNGENSNGRSFKDEEGIEGEGDGDVKVDVRALAGRLELA 180
S S DD ++ NG+ S E +E E ++DVRALA L+ A
Sbjct: 121 SYSKDD-------------DNGNGDRSEEVDISSEGEVELES---ARIDVRALARSLQFA 180
Query: 181 RTVDDVEEVLKDVGELPLQVFSSLIKGFGRDKRLGCAMALVEWLKTRKIETNGRITPNLF 240
+T DD+ +VLKD+GELPLQV SS+I GFGRDK + AM+LVEWLK +K E+ G I PNLF
Sbjct: 181 KTADDIGKVLKDMGELPLQVHSSMISGFGRDKYMDAAMSLVEWLKRKKKESGGGIGPNLF 240
Query: 241 IYNSLLGAVKQSGEFSKMEDILNDMSQEGIVSNVVTYNTIMSIYLDQGLPMKALDILEEM 300
IYNSLLGAVK S +F +ME IL+DM++EGI+ N+VTYN +M+IY++QG KAL++LEE+
Sbjct: 241 IYNSLLGAVKHSKQFGEMEKILDDMAEEGIIPNIVTYNVLMAIYVEQGEATKALNVLEEI 300
Query: 301 PKKGLTLSPVSYSTTLRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWDDEFLKLE 360
+KG + SPVSYST L AYRRM+DG+GALKF +ELRE+Y G+I ++ + +W+ EF+KLE
Sbjct: 301 QEKGFSPSPVSYSTALYAYRRMEDGHGALKFFIELREKYVKGDIGRNADENWEYEFVKLE 360
Query: 361 NFTRRVCYQVMRIWLVKGDSASTKVLQLLTEMDKAGLSLDRAEEERLVWACTCAEHHNVA 420
FT R+C QVMR WLVK ++ ST VL+LL +MD GL L R + ERL+WACT EH+ VA
Sbjct: 361 KFTVRICQQVMRRWLVKDENLSTNVLKLLRDMDNVGLKLSREDYERLIWACTREEHYLVA 420
Query: 421 KELYYRIREKKSGISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSYELIVSH 480
KELY RIRE S ISLSVCNH+IW+MGKAKKWWAALEIYEDLL+KGP PNN+SYEL+VSH
Sbjct: 421 KELYSRIRESFSEISLSVCNHLIWVMGKAKKWWAALEIYEDLLDKGPSPNNMSYELVVSH 480
Query: 481 FNVLLTAAKNRGIWRWGVRLLNKMEEKGLKPGIREWNAVLVACSRAAETSMAIEIFRRMI 540
FN+LL+AA+ RGIWRWGVRLLNKMEEKGLKPG REWNAVLVACS+A+ET+ A++IFRRM+
Sbjct: 481 FNILLSAARQRGIWRWGVRLLNKMEEKGLKPGSREWNAVLVACSKASETTAAVQIFRRMV 540
Query: 541 DQGEKPTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVAPNIYAYTTMASVFTGQGKFN 600
+QGEKPT++SYGALLSALEKGKLYDEA VWDHMIKVGV PN+YAYT MAS+FTGQG F
Sbjct: 541 EQGEKPTIISYGALLSALEKGKLYDEALRVWDHMIKVGVKPNLYAYTIMASIFTGQGNFK 600
Query: 601 MVELTINDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLI 660
MV +M +SGIEPTVVTYNAII+GC RNGMSS AYEWFHRMKV+NISPNE++YE+LI
Sbjct: 601 MVNAVFQEMASSGIEPTVVTYNAIISGCARNGMSSAAYEWFHRMKVQNISPNEITYEMLI 660
Query: 661 EALAKDGKPRLAYELYMKANNESLNLSSKIYDAVIHSSQVYGASIDISLLGPRPPDENK 713
EALA DGKPRLAY+LYM+A NESLNLSSK YDAV+ SSQVYGA+ +S+LGPRPPD K
Sbjct: 661 EALANDGKPRLAYDLYMRAQNESLNLSSKAYDAVVQSSQVYGATTYLSVLGPRPPDTKK 702
BLAST of Cp4.1LG04g05760 vs. TAIR10
Match:
AT3G46610.1 (AT3G46610.1 Pentatricopeptide repeat (PPR-like) superfamily protein)
HSP 1 Score: 771.9 bits (1992), Expect = 3.4e-223
Identity = 391/655 (59.69%), Postives = 485/655 (74.05%), Query Frame = 1
Query: 58 CYENSKFDCNFEFRHGCSKLRVARLMKPKRNSLGVWFLSAWAIEQPTIDGEVVRVQSNSG 117
C+ +S +F F S +V L +PKR+ LG F WA EQ ++ V +
Sbjct: 46 CFGSSSSISSFIFVS--SNRKVLFLCEPKRSLLGSSFGVGWATEQRELELGEEEVSTE-- 105
Query: 118 DDFPEKSLDWDDHDHNSVNGENSNGRSFKDEEGIEGEGDGDVKVDVRALAGRLELARTVD 177
D +S NG N +++VDVR LA L A+T D
Sbjct: 106 -------------DLSSANGGEKN----------------NLRVDVRELAFSLRAAKTAD 165
Query: 178 DVEEVLKDVGELPLQVFSSLIKGFGRDKRLGCAMALVEWLKTRKIETNGRITPNLFIYNS 237
DV+ VLKD GELPLQVF ++IKGFG+DKRL A+A+V+WLK +K E+ G I PNLFIYNS
Sbjct: 166 DVDAVLKDKGELPLQVFCAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNS 225
Query: 238 LLGAVKQSGEFSKMEDILNDMSQEGIVSNVVTYNTIMSIYLDQGLPMKALDILEEMPKKG 297
LLGA++ GE K IL DM +EGIV N+VTYNT+M IY+++G +KAL IL+ +KG
Sbjct: 226 LLGAMRGFGEAEK---ILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKG 285
Query: 298 LTLSPVSYSTTLRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWDDEFLKLENFTR 357
+P++YST L YRRM+DG GAL+F VELRE+Y EI D DW+ EF+KLENF
Sbjct: 286 FEPNPITYSTALLVYRRMEDGMGALEFFVELREKYAKREIGNDVGYDWEFEFVKLENFIG 345
Query: 358 RVCYQVMRIWLVKGDSASTKVLQLLTEMDKAGLSLDRAEEERLVWACTCAEHHNVAKELY 417
R+CYQVMR WLVK D+ +T+VL+LL MD AG+ R E ERL+WACT EH+ V KELY
Sbjct: 346 RICYQVMRRWLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELY 405
Query: 418 YRIREKKSGISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSYELIVSHFNVL 477
RIRE+ S ISLSVCNH+IWLMGKAKKWWAALEIYEDLL++GP+PNNLSYEL+VSHFN+L
Sbjct: 406 KRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNIL 465
Query: 478 LTAAKNRGIWRWGVRLLNKMEEKGLKPGIREWNAVLVACSRAAETSMAIEIFRRMIDQGE 537
L+AA RGIWRWGVRLLNKME+KGLKP R WNAVLVACS+A+ET+ AI+IF+ M+D GE
Sbjct: 466 LSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGE 525
Query: 538 KPTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVAPNIYAYTTMASVFTGQGKFNMVEL 597
KPTV+SYGALLSALEKGKLYDEA VW+HMIKVG+ PN+YAYTTMASV TGQ KFN+++
Sbjct: 526 KPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDT 585
Query: 598 TINDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALA 657
+ +M + GIEP+VVT+NA+I+GC RNG+S VAYEWFHRMK N+ PNE++YE+LIEALA
Sbjct: 586 LLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALA 645
Query: 658 KDGKPRLAYELYMKANNESLNLSSKIYDAVIHSSQVYGASIDISLLGPRPPDENK 713
D KPRLAYEL++KA NE L LSSK YDAV+ S++ YGA+ID++LLGPRP +N+
Sbjct: 646 NDAKPRLAYELHVKAQNEGLKLSSKPYDAVVKSAETYGATIDLNLLGPRPDKKNR 664
BLAST of Cp4.1LG04g05760 vs. TAIR10
Match:
AT5G14350.1 (AT5G14350.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 149.8 bits (377), Expect = 6.3e-36
Identity = 72/138 (52.17%), Postives = 97/138 (70.29%), Query Frame = 1
Query: 525 AIEIFRRMIDQGEKP----------------------TVLSYGALLSALEKGKLYDEARS 584
A+E++ ++D+G +P TV S+GALLSALEKGKLYDE
Sbjct: 102 ALEMYEDLLDEGPEPNNLSYEPMRLQLRPKSIKQWLTTVKSHGALLSALEKGKLYDEVLR 161
Query: 585 VWDHMIKVGVAPNIYAYTTMASVFTGQGKFNMVELTINDMVASG-IEPTVVTYNAIITGC 640
VW+HM+KVG+ PN+YAYTTMASV TGQ K N+++ + +M + G I+P+VVTYNA+I+GC
Sbjct: 162 VWNHMVKVGIEPNLYAYTTMASVLTGQQKLNLLDTLLKEMPSKGIIKPSVVTYNAVISGC 221
BLAST of Cp4.1LG04g05760 vs. TAIR10
Match:
AT1G09900.1 (AT1G09900.1 Pentatricopeptide repeat (PPR-like) superfamily protein)
HSP 1 Score: 137.9 bits (346), Expect = 2.5e-32
Identity = 113/483 (23.40%), Postives = 220/483 (45.55%), Query Frame = 1
Query: 195 SSLIKGFGRDKRLGCAMALVEWLKTRKIETNGRITPNLFIYNSLLGAVKQSGEFSKMEDI 254
++LI+GF R + A ++E L E +G + P++ YN ++ ++GE + +
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEIL-----EGSGAV-PDVITYNVMISGYCKAGEINNALSV 200
Query: 255 LNDMSQEGIVSNVVTYNTIMSIYLDQGLPMKALDILEEMPKKGLTLSPVSYSTTLRAYRR 314
L+ MS + +VVTYNTI+ D G +A+++L+ M ++ ++Y+ + A R
Sbjct: 201 LDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 260
Query: 315 MKDGNGALKFMVELRERYRNGEIAKDDNVDWDDEFLKLENFTRRVCYQVMRIWLVKGDSA 374
A+K + E+R+R ++ V Y V+ + K +
Sbjct: 261 DSGVGHAMKLLDEMRDRGCTPDV---------------------VTYNVLVNGICK-EGR 320
Query: 375 STKVLQLLTEMDKAGLSLDRAEEERLVWACTCAEHHNVAKELYYRIREKKSGISLSVCNH 434
+ ++ L +M +G + ++ + A++L + K S+ N
Sbjct: 321 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 380
Query: 435 VIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSYELIVSHFNVLLTAAKNRGIWRWGVRLL 494
+I + + A++I E + + G +PN+LSY ++ F K + + R + L
Sbjct: 381 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF------CKEKKMDR-AIEYL 440
Query: 495 NKMEEKGLKPGIREWNAVLVACSRAAETSMAIEIFRRMIDQGEKPTVLSYGALLSALEKG 554
+M +G P I +N +L A + + A+EI ++ +G P +++Y ++ L K
Sbjct: 441 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 500
Query: 555 KLYDEARSVWDHMIKVGVAPNIYAYTTMASVFTGQGKFNMVELTINDMVASGIEPTVVTY 614
+A + D M + P+ Y+++ + +GK + ++ GI P VT+
Sbjct: 501 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF 560
Query: 615 NAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKDGKPRLAYELYMKANN 674
N+I+ G ++ + A ++ M R PNE SY +LIE LA +G + A EL + N
Sbjct: 561 NSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCN 585
Query: 675 ESL 678
+ L
Sbjct: 621 KGL 585
BLAST of Cp4.1LG04g05760 vs. TAIR10
Match:
AT5G39710.1 (AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 130.2 bits (326), Expect = 5.1e-30
Identity = 122/529 (23.06%), Postives = 224/529 (42.34%), Query Frame = 1
Query: 173 ARTVDD-----VEEVLKDVGEL---PLQVFSSLIKGFGRDKRLGCAMALVEWLKTRKIET 232
A+T+DD V + L++ +L VF ++K + R + A+++V +
Sbjct: 108 AKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGF-- 167
Query: 233 NGRITPNLFIYNSLLGA-VKQSGEFSKMEDILNDMSQEGIVSNVVTYNTIMSIYLDQGLP 292
P + YN++L A ++ S E++ +M + + NV TYN ++ + G
Sbjct: 168 ----MPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNI 227
Query: 293 MKALDILEEMPKKGLTLSPVSYSTTLRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNV 352
AL + ++M KG + V+Y+T + Y +++ + K + + + +
Sbjct: 228 DVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNL------ 287
Query: 353 DWDDEFLKLENFTRRVCYQVMRIWLVKGDSASTKVLQLLTEMDKAGLSLDRAEEERLVWA 412
+ Y V+ L + + +V +LTEM++ G SLD L+
Sbjct: 288 ---------------ISYNVVINGLCR-EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 347
Query: 413 CTCAEHHNVAKELYYRIREKKSGISLSVCNH--VIWLMGKAKKWWAALEIYEDLLEKGPK 472
C E N + L + G++ SV + +I M KA A+E + + +G
Sbjct: 348 Y-CKEG-NFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC 407
Query: 473 PNNLSYELIVSHFNVLLTAAKNRGIWRWGVRLLNKMEEKGLKPGIREWNAVLVACSRAAE 532
PN +Y +V F+ +G R+L +M + G P + +NA++ +
Sbjct: 408 PNERTYTTLVDGFS-------QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 467
Query: 533 TSMAIEIFRRMIDQGEKPTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVAPNIYAYTT 592
AI + M ++G P V+SY +LS + DEA V M++ G+ P+ Y++
Sbjct: 468 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 527
Query: 593 MASVFTGQGKFNMVELTINDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRN 652
+ F Q + +M+ G+ P TY A+I G A + + M +
Sbjct: 528 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 587
Query: 653 ISPNEVSYELLIEALAKDGKPRLAYELYMKANNESLNLSSKIYDAVIHS 691
+ P+ V+Y +LI L K + R A L +K E S Y +I +
Sbjct: 588 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
BLAST of Cp4.1LG04g05760 vs. TAIR10
Match:
AT5G55840.1 (AT5G55840.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 129.4 bits (324), Expect = 8.8e-30
Identity = 118/472 (25.00%), Postives = 190/472 (40.25%), Query Frame = 1
Query: 194 FSSLIKGFGRDKRLGCAMALVEWLKTRKIETNGRITPNLFIYNSLLGAVKQSGEFSKMED 253
++ LI R R+ L+ ++ R I PN YN+L+ G+
Sbjct: 306 YNMLIHDLCRSNRIAKGYLLLRDMRKRMIH------PNEVTYNTLINGFSNEGKVLIASQ 365
Query: 254 ILNDMSQEGIVSNVVTYNTIMSIYLDQGLPMKALDILEEMPKKGLTLSPVSYSTTLRAYR 313
+LN+M G+ N VT+N ++ ++ +G +AL + M KGLT S VSY L
Sbjct: 366 LLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 425
Query: 314 RMKDGNGALKFMVELRERYRNGEIAKDDNVDWDDEFLKLENFTRRVCYQVMRIWLVKGDS 373
+ + + A F + ++ RNG R+ Y M L K
Sbjct: 426 KNAEFDLARGFYMRMK---RNGVCVG------------------RITYTGMIDGLCKNGF 485
Query: 374 ASTKVLQLLTEMDKAGLSLDRAEEERLVWACTCAEHHNVAKELY---YRIREKKSGISLS 433
V+ LL EM K G+ D L+ AKE+ YR+ +GI S
Sbjct: 486 LDEAVV-LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 545
Query: 434 VCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSYELIVSHFNVLLTAAKNRGIWRWG 493
+ MG K+ A+ IYE ++ +G ++ + FNVL+T+ G
Sbjct: 546 TLIYNCCRMGCLKE---AIRIYEAMILEGHTRDHFT-------FNVLVTSLCKAGKVAEA 605
Query: 494 VRLLNKMEEKGLKPGIREWNAVLVACSRAAETSMAIEIFRRMIDQGEKPTVLSYGALLSA 553
+ M G+ P ++ ++ + E A +F M G PT +YG+LL
Sbjct: 606 EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKG 665
Query: 554 LEKGKLYDEARSVWDHMIKVGVAPNIYAYTTMASVFTGQGKFNMVELTINDMVASGIEPT 613
L KG EA + V A + Y T+ + G +MV I P
Sbjct: 666 LCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD 725
Query: 614 VVTYNAIITGCVRNGMSSVAYEWFHRMKVR-NISPNEVSYELLIEALAKDGK 662
TY ++I+G R G + +A + + R N+ PN+V Y ++ + K G+
Sbjct: 726 SYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQ 739
BLAST of Cp4.1LG04g05760 vs. NCBI nr
Match:
gi|778681758|ref|XP_011651578.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g46610 [Cucumis sativus])
HSP 1 Score: 1197.6 bits (3097), Expect = 0.0e+00
Identity = 599/717 (83.54%), Postives = 651/717 (90.79%), Query Frame = 1
Query: 1 MSILSDWCPSS-SGLELGSYSVVNGSRKRINCARFSGC-CGNGGFALIPFSSSVLRCGFC 60
M LS+WCP+S SG+ELGSYSVV+ S KR+ FS C CGN GF+LI F+ SVLR GFC
Sbjct: 1 MHALSNWCPTSCSGVELGSYSVVHRSWKRVKSFGFSDCRCGNWGFSLISFNLSVLRSGFC 60
Query: 61 YENSKFDCNFEFRHGCSKLRVARLMKPKRNSLGVWFLSAWAIEQPTIDGEVVRVQSNSGD 120
YENS+F CN EFRHGCSKLRV LMK RNSLG + LSAWA+EQPTID E+ RV+SNS D
Sbjct: 61 YENSRFVCNCEFRHGCSKLRVVPLMKTNRNSLGAFCLSAWAVEQPTIDDEITRVESNSRD 120
Query: 121 DFPEKSLDWDDHDHNSVNGENSNGR-SFKDEEGIEGEGDGDVKVDVRALAGRLELARTVD 180
PE+ LDWDD D VNGENS+G SFKDE +EG GDV+VDVRALA +L+LART D
Sbjct: 121 GLPERGLDWDDDDDGKVNGENSHGGGSFKDEGELEGV--GDVRVDVRALAAQLQLARTAD 180
Query: 181 DVEEVLKDVGELPLQVFSSLIKGFGRDKRLGCAMALVEWLKTRKIETNGRITPNLFIYNS 240
DV++VLKD+ ELPLQVFSS+I+GFGRD+RL CA+ALV+WLK +KIETNGRI PNLFIYNS
Sbjct: 181 DVDQVLKDMVELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNS 240
Query: 241 LLGAVKQSGEFSKMEDILNDMSQEGIVSNVVTYNTIMSIYLDQGLPMKALDILEEMPKKG 300
LLGAVKQSGE S+ME++L DM+QEGIVSNVVTYNTIMSIYL+QGL MKAL ILEEMPKKG
Sbjct: 241 LLGAVKQSGELSRMENVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAMKALGILEEMPKKG 300
Query: 301 LTLSPVSYSTTLRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWDDEFLKLENFTR 360
LTLSPVSYST LRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDW +EFLKLENFTR
Sbjct: 301 LTLSPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTR 360
Query: 361 RVCYQVMRIWLVKGDSASTKVLQLLTEMDKAGLSLDRAEEERLVWACTCAEHHNVAKELY 420
RVCYQVMRIWLVKGD ASTKVLQLL EMDKAGLSLDRAE ERL+WACTCAEH+NVAKELY
Sbjct: 361 RVCYQVMRIWLVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELY 420
Query: 421 YRIREKKSGISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSYELIVSHFNVL 480
+RIREK+ GISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNN+SYELIVSHFNVL
Sbjct: 421 FRIREKQCGISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVL 480
Query: 481 LTAAKNRGIWRWGVRLLNKMEEKGLKPGIREWNAVLVACSRAAETSMAIEIFRRMIDQGE 540
LTAAK RGIWRWGVRLLNKMEEKGL+PG REWNAVLVACSRAAETS AI+IFR+M++QGE
Sbjct: 481 LTAAKKRGIWRWGVRLLNKMEEKGLRPGSREWNAVLVACSRAAETSAAIDIFRKMVEQGE 540
Query: 541 KPTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVAPNIYAYTTMASVFTGQGKFNMVEL 600
KPTVLSYGALLSALEKGKLYDEARSVWDHMI+VGV PNIYAYTTMASVFTGQGKFNMVE+
Sbjct: 541 KPTVLSYGALLSALEKGKLYDEARSVWDHMIRVGVEPNIYAYTTMASVFTGQGKFNMVEV 600
Query: 601 TINDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALA 660
TINDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALA
Sbjct: 601 TINDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALA 660
Query: 661 KDGKPRLAYELYMKANNESLNLSSKIYDAVIHSSQVYGASIDISLLGPRPPDENKSS 715
K+GKPRLAYELYM+A +E LNLSSK+YDAVI SSQ+YGAS++I LLG RPPD NKSS
Sbjct: 661 KEGKPRLAYELYMRAKDEGLNLSSKVYDAVIESSQLYGASVNIKLLGLRPPDRNKSS 715
BLAST of Cp4.1LG04g05760 vs. NCBI nr
Match:
gi|659098232|ref|XP_008450041.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g46610 [Cucumis melo])
HSP 1 Score: 1075.1 bits (2779), Expect = 0.0e+00
Identity = 538/637 (84.46%), Postives = 583/637 (91.52%), Query Frame = 1
Query: 79 VARLMKPKRNSLGVWFLSAWAIEQPTIDGEVVRVQSNSGDDFPEKSLDWDDHDHNSVNGE 138
++ L KP RNSL W LSAW +EQPTI E+ RV+SNS D PE+ LDWD D ++VNGE
Sbjct: 7 LSSLCKPNRNSLEAWCLSAWTVEQPTIGDELPRVESNSRDGLPERRLDWDGDDDDNVNGE 66
Query: 139 NSNGR-SFKDEEGIEGEGDGDVKVDVRALAGRLELARTVDDVEEVLKDVGELPLQVFSSL 198
NS+G SFKDE E EG GDV+VDVRALA +L+LART DDV++VLKD+ ELPLQVFSS+
Sbjct: 67 NSHGGGSFKDEG--EMEGVGDVRVDVRALAAQLQLARTADDVDQVLKDMVELPLQVFSSM 126
Query: 199 IKGFGRDKRLGCAMALVEWLKTRKIETNGRITPNLFIYNSLLGAVKQSGEFSKMEDILND 258
I+GFGRD+RL CA+ALV+WLK +KIETNGRI PNLFIYNSLLGAVKQSGE KME++L +
Sbjct: 127 IRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQSGELLKMENVLTE 186
Query: 259 MSQEGIVSNVVTYNTIMSIYLDQGLPMKALDILEEMPKKGLTLSPVSYSTTLRAYRRMKD 318
M+QEGIVSNVVTYNTIMSIYL+QGL KAL ILEEMPKKGLTLSPVSYST LRAYR+MKD
Sbjct: 187 MAQEGIVSNVVTYNTIMSIYLEQGLATKALGILEEMPKKGLTLSPVSYSTALRAYRKMKD 246
Query: 319 GNGALKFMVELRERYRNGEIAKDDNVDWDDEFLKLENFTRRVCYQVMRIWLVKGDSASTK 378
GNGAL+FMVELRERY NGEIAKDDNVDW +EFLKLENFTRRVCYQVMRIWLVKGD ASTK
Sbjct: 247 GNGALEFMVELRERYHNGEIAKDDNVDWANEFLKLENFTRRVCYQVMRIWLVKGDCASTK 306
Query: 379 VLQLLTEMDKAGLSLDRAEEERLVWACTCAEHHNVAKELYYRIREKKSGISLSVCNHVIW 438
VLQLL EMDKAGLSLDRAEEERL+WACTCAEH+NVAKELY RIREK+ GISLSVCNHVIW
Sbjct: 307 VLQLLMEMDKAGLSLDRAEEERLIWACTCAEHYNVAKELYIRIREKQCGISLSVCNHVIW 366
Query: 439 LMGKAKKWWAALEIYEDLLEKGPKPNNLSYELIVSHFNVLLTAAKNRGIWRWGVRLLNKM 498
LMGKAKKWWAALEIYE+LLEKGPKPNN+SYELIVSHFNVLLTAAK RGIWRWGVRLLNKM
Sbjct: 367 LMGKAKKWWAALEIYEELLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIWRWGVRLLNKM 426
Query: 499 EEKGLKPGIREWNAVLVACSRAAETSMAIEIFRRMIDQGEKPTVLSYGALLSALEKGKLY 558
EEKGL+PG REWNAVLVACSRAAETS AI+IFRRM++QGEKPTVLSYGALLSALEKGKLY
Sbjct: 427 EEKGLRPGSREWNAVLVACSRAAETSAAIDIFRRMVEQGEKPTVLSYGALLSALEKGKLY 486
Query: 559 DEARSVWDHMIKVGVAPNIYAYTTMASVFTGQGKFNMVELTINDMVASGIEPTVVTYNAI 618
DEARSVWDHMI+VGV PNIYAYTTMASVFT QGKFNMVE+TINDMVASGIEPTVVTYNAI
Sbjct: 487 DEARSVWDHMIRVGVEPNIYAYTTMASVFTSQGKFNMVEVTINDMVASGIEPTVVTYNAI 546
Query: 619 ITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKDGKPRLAYELYMKANNESL 678
ITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAK+GKPRLAYELY +A +E L
Sbjct: 547 ITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKEGKPRLAYELYRRAKDEGL 606
Query: 679 NLSSKIYDAVIHSSQVYGASIDISLLGPRPPDENKSS 715
NLSSKIYDAVI SSQ+YGASIDI LLG RPPD+NKSS
Sbjct: 607 NLSSKIYDAVIESSQLYGASIDIRLLGLRPPDKNKSS 641
BLAST of Cp4.1LG04g05760 vs. NCBI nr
Match:
gi|719977153|ref|XP_010248762.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g46610 [Nelumbo nucifera])
HSP 1 Score: 865.1 bits (2234), Expect = 8.3e-248
Identity = 440/702 (62.68%), Postives = 541/702 (77.07%), Query Frame = 1
Query: 20 SVVNGSRKRINCARFSGCCGNGGFA---LIPFSSSVLRCGFCYENSKFDCNFEFRHGCSK 79
S + +K+I CA GC G + L+ +S+ R G C N F + SK
Sbjct: 29 STIRRGKKKI-CA-IDGCIYQGRSSHLLLVSRTSAEFRTGACCWNPNFTPQYGIFFSLSK 88
Query: 80 LRVARLMKPKRNSLGVWFLSAWAIEQPTIDGEVVRVQSNSGDDFP---EKSLDWDDHDHN 139
+ + KRN G F AWA+EQ I E SN D E L +D+ +
Sbjct: 89 QKFVLFCESKRNLFGASFALAWALEQRAIGNEFATEASNPPDKLSKDGECHLSFDEEVNE 148
Query: 140 SV--NGENSNGRSFKDEEGIEGEGDGDVKVDVRALAGRLELARTVDDVEEVLKDVGELPL 199
++ G G + ++E+ +E D + ++DVRALA L L +TV DVEE+LKD+GELPL
Sbjct: 149 TILSEGGGPGGEASENEKVVE---DNNTRIDVRALAWSLRLVKTVGDVEEILKDMGELPL 208
Query: 200 QVFSSLIKGFGRDKRLGCAMALVEWLKTRKIETNGRITPNLFIYNSLLGAVKQSGEFSKM 259
V+SS+I+GFG +KRL AMALVEWL+T+K E PNLFIYNSLLGAVKQS +F +
Sbjct: 209 PVYSSIIRGFGIEKRLESAMALVEWLRTKKKEIKDFSGPNLFIYNSLLGAVKQSEQFGEA 268
Query: 260 EDILNDMSQEGIVSNVVTYNTIMSIYLDQGLPMKALDILEEMPKKGLTLSPVSYSTTLRA 319
E ++ DM++EGI+ NVVTYNT+MSIYL+QG +KALD+L+E+ +KGL+ SP+SYST L A
Sbjct: 269 ERVMKDMAEEGILPNVVTYNTLMSIYLEQGQSIKALDLLKEIQEKGLSPSPISYSTALLA 328
Query: 320 YRRMKDGNGALKFMVELRERYRNGEIAKDD-NVDWDDEFLKLENFTRRVCYQVMRIWLVK 379
YRRM+DG+GALKF VELRE+Y+ GEI KD+ + DW++EF+KLE F R+CYQVMR WLVK
Sbjct: 329 YRRMEDGDGALKFFVELREKYQKGEIGKDNTDEDWENEFVKLEKFIIRICYQVMRRWLVK 388
Query: 380 GDSASTKVLQLLTEMDKAGLSLDRAEEERLVWACTCAEHHNVAKELYYRIREKKSGISLS 439
GD +++VL+LLT+MDK GL RAE ERLVWACT H+ VAKELY RIRE++S ISLS
Sbjct: 389 GDHLNSRVLKLLTDMDKVGLRPGRAEHERLVWACTLEGHYTVAKELYNRIRERESDISLS 448
Query: 440 VCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSYELIVSHFNVLLTAAKNRGIWRWG 499
VCNH+IWLMGKAKKWWAALEIYEDLL+KGPKPNNLSYELIVSHFN+LLTAA+ RGIWRWG
Sbjct: 449 VCNHIIWLMGKAKKWWAALEIYEDLLDKGPKPNNLSYELIVSHFNILLTAARRRGIWRWG 508
Query: 500 VRLLNKMEEKGLKPGIREWNAVLVACSRAAETSMAIEIFRRMIDQGEKPTVLSYGALLSA 559
VRLLNKME+KGLKPG REWNAVLVACS+A+ETS A++IFRRM++QGEKPT+LSYGALLSA
Sbjct: 509 VRLLNKMEDKGLKPGSREWNAVLVACSKASETSAAVQIFRRMVEQGEKPTILSYGALLSA 568
Query: 560 LEKGKLYDEARSVWDHMIKVGVAPNIYAYTTMASVFTGQGKFNMVELTINDMVASGIEPT 619
LEKGKLYDEA VWDHM+KVGV PN+YAYTTMASV GQG+ V+ I DM++SGIEPT
Sbjct: 569 LEKGKLYDEALRVWDHMVKVGVEPNLYAYTTMASVCIGQGRPERVDSLIRDMISSGIEPT 628
Query: 620 VVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKDGKPRLAYELYM 679
VVTYNAII+GC RNG+ S A+EWFHRMKV+NISPNE++YE+LIEALAKD KPRLAYELY+
Sbjct: 629 VVTYNAIISGCARNGIGSTAFEWFHRMKVQNISPNEITYEMLIEALAKDAKPRLAYELYL 688
Query: 680 KANNESLNLSSKIYDAVIHSSQVYGASIDISLLGPRPPDENK 713
+A E L+LSSK YDAVI SS+ YGA+ID+S+LGPRPP++ K
Sbjct: 689 RAQKEGLHLSSKAYDAVIESSRYYGATIDVSVLGPRPPEKKK 725
BLAST of Cp4.1LG04g05760 vs. NCBI nr
Match:
gi|567909807|ref|XP_006447217.1| (hypothetical protein CICLE_v10014357mg [Citrus clementina])
HSP 1 Score: 858.6 bits (2217), Expect = 7.7e-246
Identity = 430/681 (63.14%), Postives = 532/681 (78.12%), Query Frame = 1
Query: 40 NGGFALIPFSSSVLRCGFCYENSKFDCNFEFRHGCSKLRVARLMKPKRNSLGVWFLSAWA 99
N GF L+ +S+ CG C + K D EF G S ++ +PK++ G + AW+
Sbjct: 50 NTGFLLVSSNSTFSCCGVCCRSIKLDSKCEFLSGFSSHKLVLFCEPKKSYFGASVMFAWS 109
Query: 100 IEQPTIDGEVVRVQSNSGDDFPEKSLDWDDHDHNSVN-----GENSNGRSFKDEEGIEGE 159
+EQ I ++ + NS D ++ + D D+ SV+ G+N N ++ E I
Sbjct: 110 MEQQEIGNGLLVEEPNSADGLLVET-ESDIVDYRSVHRVEDTGDNGNQVESEEVEIIGER 169
Query: 160 GDGDVK---VDVRALAGRLELARTVDDVEEVLKDVGELPLQVFSSLIKGFGRDKRLGCAM 219
G G K VDV+ALA L +T DDVEEVLKD+GELP QV SS+I+GFG++KR CAM
Sbjct: 170 GVGKQKSGRVDVKALAQSLWHTKTADDVEEVLKDMGELPPQVHSSMIRGFGKEKRTDCAM 229
Query: 220 ALVEWLKTRKIETNGRITPNLFIYNSLLGAVKQSGEFSKMEDILNDMSQEGIVSNVVTYN 279
ALVEWLK +K ET G I PNLF+YNSLLGAVKQS +F +M+ I+NDM++EG+ NVVTYN
Sbjct: 230 ALVEWLKRKKRETGGFIGPNLFVYNSLLGAVKQSQKFEEMDRIMNDMAEEGVNPNVVTYN 289
Query: 280 TIMSIYLDQGLPMKALDILEEMPKKGLTLSPVSYSTTLRAYRRMKDGNGALKFMVELRER 339
T+M+IY++QG KAL++LEE+ KKGLT S VSYS L AYRRM+DGNGALKF VELRE+
Sbjct: 290 TLMAIYIEQGEGTKALNVLEEIKKKGLTPSAVSYSQALLAYRRMEDGNGALKFFVELREK 349
Query: 340 YRNGEIAKDDNVDWDDEFLKLENFTRRVCYQVMRIWLVKGDSASTKVLQLLTEMDKAGLS 399
Y GEI K D+ +W++EF+KL++F R+CYQVMR WLVK ++ ST VL+LL EMDKAGL
Sbjct: 350 YLKGEIGKGDDENWENEFVKLKDFIIRICYQVMRRWLVKDENLSTNVLKLLIEMDKAGLR 409
Query: 400 LDRAEEERLVWACTCAEHHNVAKELYYRIREKKSGISLSVCNHVIWLMGKAKKWWAALEI 459
+AE ERLVWACT EH+ VAKE Y RIRE+ ISLSVCNH+IWLMGKAKKWWAALE+
Sbjct: 410 PVKAEYERLVWACTREEHYVVAKEFYARIRERHDEISLSVCNHLIWLMGKAKKWWAALEV 469
Query: 460 YEDLLEKGPKPNNLSYELIVSHFNVLLTAAKNRGIWRWGVRLLNKMEEKGLKPGIREWNA 519
YEDLL+KGPKPNN+SYELIVSHFN+LL+AA+ RGIWRWGVRLLNKMEEKGLKPG REWNA
Sbjct: 470 YEDLLDKGPKPNNMSYELIVSHFNILLSAARKRGIWRWGVRLLNKMEEKGLKPGSREWNA 529
Query: 520 VLVACSRAAETSMAIEIFRRMIDQGEKPTVLSYGALLSALEKGKLYDEARSVWDHMIKVG 579
VLVACS+A+E + A++IF+RM+++GEKPT++SYGALLSALEKGKLYDEA VW HM+ VG
Sbjct: 530 VLVACSKASEYNAAVQIFKRMVEKGEKPTIISYGALLSALEKGKLYDEASRVWQHMLNVG 589
Query: 580 VAPNIYAYTTMASVFTGQGKFNMVELTINDMVASGIEPTVVTYNAIITGCVRNGMSSVAY 639
PN+YAYT MAS+FT QGKFN+VEL +M +S IEPTVVTYNAII+ C +NGMSS AY
Sbjct: 590 AEPNLYAYTIMASIFTAQGKFNLVELIFREMASSRIEPTVVTYNAIISACGQNGMSSAAY 649
Query: 640 EWFHRMKVRNISPNEVSYELLIEALAKDGKPRLAYELYMKANNESLNLSSKIYDAVIHSS 699
EWFHRMKV+NISPNE++YE+LIEALAKDGKPRLAY+LY++A NE LNLSSK YDA++ S
Sbjct: 650 EWFHRMKVQNISPNEITYEMLIEALAKDGKPRLAYDLYLRARNEELNLSSKAYDAILEFS 709
Query: 700 QVYGASIDISLLGPRPPDENK 713
QVYGA+ID+++LGPRPPD+ K
Sbjct: 710 QVYGATIDLTVLGPRPPDKKK 729
BLAST of Cp4.1LG04g05760 vs. NCBI nr
Match:
gi|590646689|ref|XP_007031692.1| (Pentatricopeptide repeat (PPR-like) superfamily protein, putative [Theobroma cacao])
HSP 1 Score: 858.6 bits (2217), Expect = 7.7e-246
Identity = 433/699 (61.95%), Postives = 529/699 (75.68%), Query Frame = 1
Query: 15 ELGSY---SVVNGSRKRINCARFSGCCGNGGFALIPFSSSVLRCGFCYENSKFDCNFEFR 74
ELGS S SRK + A G F L+ S R G CY N F
Sbjct: 22 ELGSSCFASTKPSSRKTWSLAESRG----PSFLLLSSYSRFSRSGTCYRNLNCSLRCGFL 81
Query: 75 HGCSKLRVARLMKPKRNSLGVWFLSAWAIEQPTIDGEVVRVQSNSGDDFPEKSLDWDDHD 134
S+L+V +PKR S AWA+EQ I E+ R +S+S D D + D
Sbjct: 82 CWYSELKVVLFCEPKRGSSRGLVALAWALEQQEIGNELEREESHSRDG------DNGNED 141
Query: 135 HNSVNGENSNGRSFKDEEGIEGEGDGDVKVDVRALAGRLELARTVDDVEEVLKDVGELPL 194
N +S G E E + ++DVRALA L+ A+T DD+E+VLKD+ ELPL
Sbjct: 142 KNEEMDASSEG---------EVELEESARLDVRALASSLQFAKTADDIEKVLKDMDELPL 201
Query: 195 QVFSSLIKGFGRDKRLGCAMALVEWLKTRKIETNGRITPNLFIYNSLLGAVKQSGEFSKM 254
QV SS+IKGFGRD + AMALVEWLK +K ++ G + PNLFIYNSLLGAVK S +F +M
Sbjct: 202 QVHSSMIKGFGRDNYMDAAMALVEWLKRKKNDSGGSVGPNLFIYNSLLGAVKHSKQFREM 261
Query: 255 EDILNDMSQEGIVSNVVTYNTIMSIYLDQGLPMKALDILEEMPKKGLTLSPVSYSTTLRA 314
E IL DM +EG++ N+VTYN +M+IYL+QG KAL++LEE+ +KG + SPVSYST L A
Sbjct: 262 EKILKDMEEEGVIPNIVTYNVLMAIYLEQGEATKALNVLEEIQEKGFSPSPVSYSTALLA 321
Query: 315 YRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWDDEFLKLENFTRRVCYQVMRIWLVKG 374
YRRM+DGNGALKF +ELRE+Y G++ KD + +W+ EF+KLENFT R+C QVMR WLVK
Sbjct: 322 YRRMEDGNGALKFFIELREKYVKGDLGKDADENWEYEFVKLENFTVRICQQVMRRWLVKD 381
Query: 375 DSASTKVLQLLTEMDKAGLSLDRAEEERLVWACTCAEHHNVAKELYYRIREKKSGISLSV 434
++ ST VL+LL +MD AGL L + + ER++WACTC EH+ VAKELY RIRE+ S ISLSV
Sbjct: 382 ENLSTNVLKLLRDMDNAGLKLSKEDYERIIWACTCEEHYVVAKELYSRIRERHSEISLSV 441
Query: 435 CNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSYELIVSHFNVLLTAAKNRGIWRWGV 494
CNH+IWLMGKAKKWWAALE+YE+LL+KGP PNNLSYEL++SHFN+LLTAA+ RGIWRWGV
Sbjct: 442 CNHLIWLMGKAKKWWAALEVYEELLDKGPSPNNLSYELVMSHFNILLTAARKRGIWRWGV 501
Query: 495 RLLNKMEEKGLKPGIREWNAVLVACSRAAETSMAIEIFRRMIDQGEKPTVLSYGALLSAL 554
RLLNKME+KGLKPG REWNAVLVACS+A+ET+ A++IFRRM++QGEKPT++SYGALLSAL
Sbjct: 502 RLLNKMEDKGLKPGSREWNAVLVACSKASETTAAVQIFRRMVEQGEKPTIISYGALLSAL 561
Query: 555 EKGKLYDEARSVWDHMIKVGVAPNIYAYTTMASVFTGQGKFNMVELTINDMVASGIEPTV 614
EKGKLYDEA VWDHMIKVGV PN+YAYT MAS+ TG+G F MV +M +SGIEPTV
Sbjct: 562 EKGKLYDEALRVWDHMIKVGVKPNLYAYTIMASIVTGKGNFRMVNAVFQEMASSGIEPTV 621
Query: 615 VTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKDGKPRLAYELYMK 674
VTYNAII+GC RNGMSS AYEWFHRMKV+NISPNE++Y++LIEALAKDGKPRLAYELY++
Sbjct: 622 VTYNAIISGCARNGMSSAAYEWFHRMKVQNISPNEITYQMLIEALAKDGKPRLAYELYLR 681
Query: 675 ANNESLNLSSKIYDAVIHSSQVYGASIDISLLGPRPPDE 711
A+NE LNLSSK YDAV+ SSQVYGA+ D+S+LGPRPPD+
Sbjct: 682 AHNEGLNLSSKAYDAVVQSSQVYGATTDLSVLGPRPPDK 701
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PP264_ARATH | 6.0e-222 | 59.69 | Pentatricopeptide repeat-containing protein At3g46610 OS=Arabidopsis thaliana GN... | [more] |
| PPR28_ARATH | 4.4e-31 | 23.40 | Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN... | [more] |
| PP407_ARATH | 9.1e-29 | 23.06 | Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN... | [more] |
| RF1_ORYSI | 1.2e-28 | 21.48 | Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=1 | [more] |
| PP432_ARATH | 1.6e-28 | 25.00 | Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana GN... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LB88_CUCSA | 0.0e+00 | 83.54 | Uncharacterized protein OS=Cucumis sativus GN=Csa_3G595200 PE=4 SV=1 | [more] |
| A0A061EDB6_THECC | 5.4e-246 | 61.95 | Pentatricopeptide repeat (PPR-like) superfamily protein, putative OS=Theobroma c... | [more] |
| V4U3G6_9ROSI | 5.4e-246 | 63.14 | Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014357mg PE=4 SV=1 | [more] |
| A0A067LGA6_JATCU | 8.6e-244 | 61.01 | Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10203 PE=4 SV=1 | [more] |
| A0A0D2V3F1_GOSRA | 4.7e-242 | 60.78 | Uncharacterized protein OS=Gossypium raimondii GN=B456_012G091600 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G46610.1 | 3.4e-223 | 59.69 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
| AT5G14350.1 | 6.3e-36 | 52.17 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT1G09900.1 | 2.5e-32 | 23.40 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
| AT5G39710.1 | 5.1e-30 | 23.06 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT5G55840.1 | 8.8e-30 | 25.00 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
