CsaV3_3G026600 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TAATATTGCAACTTTGGAAAATGCAAGCAGAATTGTGAAGTTTTGGAAAATAAAATAGTTGAAATACATATTTCCCATACATATATTATAATTGAAAAAGTGGGAAAAAAATGTGGAAATTGGAAAGTAATTGAAGTTTCACCGACTCTGTCAAATCCGTACGAACCGATGACCTACAAATTCCCAATCCTTTCTTCCTCTTTCAGTTCTTTACCTTCTTCTTCAACCATCTTCACACACACAACTTTTTTATAAACTCAAACAAACCCTATTTCCCTCTCTCTCTTTCTCTAACACTTTTCAAATCTTCAAAGAAAGAAAATTCCAATTTTGATCAACGAACCGGCCCGCAAGCAGAGGCAGAGCATATCCGGCCCCCATGGAGGACTACAACAACAACAATGATGATGATCAACAACAGATTATAAAGATAGAAGATACTAGCACTATCACTGATGGCGGCGGCGGAGGCGACGGTGGTGGTCGTGGTGGTGGTGATGGTGGGGTTTTCTCATTTTCCGATAACATAATACCAAATGGATTGTTTGATTTTTGTGATGGTGATAAATGCTCTGTTGGGTTTATGGAGTTGCTTGGTCTTAATTACAATTCTGAATTTACTGAGGCTTTTAATAATCCTCCAGCCACCCCCAATTGTTCGTCCTCCGTCTCCTCCGCCTCTAGCGACGCTCTTAACGACGACGAACCACCACCACCACCACCACAACAACAACAACAACAACACAGCCCCACTAAACAGTTAGTAATTTCTGTTTTCATTCGTTCATTCTTCTTCTTCTTCTTTTCATTTAATTTAAAAGAAGATAAAACTTTTGTTTTCATGATTGTTTTGATCAGATCCATCCTGAAAATGGGGTTTTTTTTAAAATGTAAATGGATTTATTAATTTAATATAAGAAAAAAGGAAACTTGTGGAAGTTATGTACCAAACCATCTGTCTTTACTTTTTTTTTTAAAAAAAGAAAGAAATTAGAAATTAATAAGAAAAATGATAAAATTAGAGTAGTGCTAATTAAATTTTGTGAATAGATTGAAAGGGATAAAAAAGAGGAAGGAGAAGGAGAAGGAGAAGAAAGCAAGATTCGCATTCATGACAAAGAGTGAAGTTGATCATCTAGAAGATGGTTATCGATGGAGAAAGTACGGCCAAAAAGCTGTCAAAAACAGCCCTTTTCCTAGGTATTTCTTTTCTTTTCTTTTCTTTCCCTTTTACCCTTCTCTCCTCTTTCTTTTTCTCTTCTTCTTTTCCTTTTTCTTTTTTCACCACCCACCTTACCTCCCTCCTAACTGCCATCTCCATTCCCTCCTCATCGTTCTTCTACTCAAAATCCCATTTAACTACTTCTTATCTTTCTCATCACCATATCTGTATATTATCTACTCACTTTGTAAGGATTATTAAGTCACAAATGGGTTAAACAAGAAATTAGGAACTTAAGTGCATTTAGGACAAACTACTCTCATCTATAATTAACTACCGATATTAATATTTCAAATTCTACCCCCCTTTCATACTCATCCTGTCTCTCTGACTAATTTGCTCCCAATAAGTATTAATTATTATAACCTATGGAATAAACCAAATTAATGCTCCACATATTGAATGATAGTAGAACGACTCTCCACCTTTAGTTTTAAACTTGTGTGCAATAATGCTTGAGTTTGATTGAAAAGTTGGAGATATTTTTTTTAATTTGTGCTGTTTTTATCTTCTCTATAGAAGTTATTACCGTTGCACGAGTGCAGCATGTAATGTAAAGAAGAGAGTTGAACGATCTTTTGCTGATCCAACTGTAGTGGTGACCACCTATGAAGGCCAACACACTCACCCAAGCCCTATCCTTAGCCGGTCCGCCCTAGCCGTCGCCATTCCACCTCCCTCTTTCATCCCTGGGGCGGGCGGAGAGTGTGTTGGGGGCGTTGTAGCCATGCCATGGCTCAAACCTAGCAACAATGATGCTCATGGTTCGGTTTGTATCCTTACAACTTTTGAGTTATACTTTGAGTATTTTTTTTGTTATTGTACATTTAAAATATTCATTGTTTTCGTCTATACGGTAAAAGAAAAAAATTATGAGTTAAAAACGCATCTATATTTTGGTACTTTTAAAAGTGATTGTTTCTATCACAACCATTAATTAAGTAGTCATGAATAAGCTAACAAATTAATGATGGAGAGTTTGGGGTTGGGGAAGAGAAATAATTAGTCCAATTGACAACGACGTGTCATCTACTTATTTGTCTTATGGAAAATTAATATAAACATCAAATTATATTTTTTCTTTTGTTTTTTTGAAAATTAATTAACTCTACAAATACTTCTTCTATCATTTTTAAATCTACATGTTCTGATATTTATTTTTTATTCAAAATCAAGTCAATTTTTTAAAAAAAAATGATTAAAAAAAATAGAATATTCAAAATATTTACCATTTATGTAAAAATCAAGTATAATTAATTTTTCTTGTTGGTGGTTTGGTTTTATGAAGTGTAAATAGTTGGTTGATTTTTCTATTTTTGAAAAGATCAATCTTTAACACGTTAAATTCTGATTTAATTAGATCAAAAATAGGTGAAAAGAAAAGCCAAAAAACCCAAGACCAAATGGATTTTTAATTCAAAATCTTTTAGTCCAATCATTTCATTTTTTTGTTTTTGTTTTTTTGAAAATTAAACTTGTTATCTTTCCCTAAATTTAAAGTAAAATAAGTTTTAAAACTAGTTTTTTAGTTTAAAAAATTTGACTGATAGTAGATGATAATTCAAGAAATTTAGAGTGAGTGAGTGAAACTTAAAAACAAAAAGAAGACATTTACCTGGTTACTAAATTAGACCATATTATATAGCAAGAAAACTTAAAAGAAAACTTAAAATTCAAACAAAAAAGTTATGAACTATAACAATTGTTATAATTGAAATAATTTCCTGGTATTTCTTTTTCTAATTTTTATATTTCAAACAGATGGTAACACGGTTCCAGCAATGTCTCATCAATACTTTCAAAACTCGACCTACATCACTGCCCAAAATGTAGCCGCCAACTATAACCGAAACAACCACATCGGAGCAGCGAACGCGGCCGGAATCCTCCAGGAGAAACGGTTTTGTAACCCAAATTCTAGTTTTCTTGTAGACCATGGCCTGCTTCAAGATGTTGTTCCTCCCCACATGCTGAAACAGGAGTAAAAATATACTATATATTCTCATATATTACATTATATAGACATATAGATATAAATATATACTATATATATATATATATTAGTTTAAGTTGGAAAAGAAAACTAAATTGGTGTTTTTGTTTGAATTTTAGCCTAGAGAACTGACTTGTGTTGTTCATAGAAGATGTTAGAGGGAACAAACAAAAATTATGAAATTGAAATTTGTTGCTGACAAAGTTTAATTTGGTGATCTTTTCCCTCTCTTGAGGAAAAAAGAGATCGATTTTCCGTATGTTGAAACTTTGGTTACAAGTTCGATGGGTCTTCTAACTTAATTGTATTATTATTCTTTTTATTTTTGTTTATGAGGTTATCAGAAAGAGAAAGATTGATAATTAAGAGCATGTGAGAGAAGAAAGAGGAGGAGGGTTTTGTTGGTTCTATTAAATGATGTTTCTGACCACTCTCTTTTGCCCCCATATCTTTGTTTTTTTTTCCAAAGCACAAGCAGAGAATATTGTGATTTATTCTTAACAAATATAGCGTTGAAGGTTTGAGTTTTTATTGTGTTATTGCCGACTAA ATGGAGGACTACAACAACAACAATGATGATGATCAACAACAGATTATAAAGATAGAAGATACTAGCACTATCACTGATGGCGGCGGCGGAGGCGACGGTGGTGGTCGTGGTGGTGGTGATGGTGGGGTTTTCTCATTTTCCGATAACATAATACCAAATGGATTGTTTGATTTTTGTGATGGTGATAAATGCTCTGTTGGGTTTATGGAGTTGCTTGGTCTTAATTACAATTCTGAATTTACTGAGGCTTTTAATAATCCTCCAGCCACCCCCAATTGTTCGTCCTCCGTCTCCTCCGCCTCTAGCGACGCTCTTAACGACGACGAACCACCACCACCACCACCACAACAACAACAACAACAACACAGCCCCACTAAACAATTGAAAGGGATAAAAAAGAGGAAGGAGAAGGAGAAGGAGAAGAAAGCAAGATTCGCATTCATGACAAAGAGTGAAGTTGATCATCTAGAAGATGGTTATCGATGGAGAAAGTACGGCCAAAAAGCTGTCAAAAACAGCCCTTTTCCTAGAAGTTATTACCGTTGCACGAGTGCAGCATGTAATGTAAAGAAGAGAGTTGAACGATCTTTTGCTGATCCAACTGTAGTGGTGACCACCTATGAAGGCCAACACACTCACCCAAGCCCTATCCTTAGCCGGTCCGCCCTAGCCGTCGCCATTCCACCTCCCTCTTTCATCCCTGGGGCGGGCGGAGAGTGTGTTGGGGGCGTTGTAGCCATGCCATGGCTCAAACCTAGCAACAATGATGCTCATGATGGTAACACGGTTCCAGCAATGTCTCATCAATACTTTCAAAACTCGACCTACATCACTGCCCAAAATGTAGCCGCCAACTATAACCGAAACAACCACATCGGAGCAGCGAACGCGGCCGGAATCCTCCAGGAGAAACGGTTTTGTAACCCAAATTCTAGTTTTCTTGTAGACCATGGCCTGCTTCAAGATGTTGTTCCTCCCCACATGCTGAAACAGGAGTAA ATGGAGGACTACAACAACAACAATGATGATGATCAACAACAGATTATAAAGATAGAAGATACTAGCACTATCACTGATGGCGGCGGCGGAGGCGACGGTGGTGGTCGTGGTGGTGGTGATGGTGGGGTTTTCTCATTTTCCGATAACATAATACCAAATGGATTGTTTGATTTTTGTGATGGTGATAAATGCTCTGTTGGGTTTATGGAGTTGCTTGGTCTTAATTACAATTCTGAATTTACTGAGGCTTTTAATAATCCTCCAGCCACCCCCAATTGTTCGTCCTCCGTCTCCTCCGCCTCTAGCGACGCTCTTAACGACGACGAACCACCACCACCACCACCACAACAACAACAACAACAACACAGCCCCACTAAACAATTGAAAGGGATAAAAAAGAGGAAGGAGAAGGAGAAGGAGAAGAAAGCAAGATTCGCATTCATGACAAAGAGTGAAGTTGATCATCTAGAAGATGGTTATCGATGGAGAAAGTACGGCCAAAAAGCTGTCAAAAACAGCCCTTTTCCTAGAAGTTATTACCGTTGCACGAGTGCAGCATGTAATGTAAAGAAGAGAGTTGAACGATCTTTTGCTGATCCAACTGTAGTGGTGACCACCTATGAAGGCCAACACACTCACCCAAGCCCTATCCTTAGCCGGTCCGCCCTAGCCGTCGCCATTCCACCTCCCTCTTTCATCCCTGGGGCGGGCGGAGAGTGTGTTGGGGGCGTTGTAGCCATGCCATGGCTCAAACCTAGCAACAATGATGCTCATGATGGTAACACGGTTCCAGCAATGTCTCATCAATACTTTCAAAACTCGACCTACATCACTGCCCAAAATGTAGCCGCCAACTATAACCGAAACAACCACATCGGAGCAGCGAACGCGGCCGGAATCCTCCAGGAGAAACGGTTTTGTAACCCAAATTCTAGTTTTCTTGTAGACCATGGCCTGCTTCAAGATGTTGTTCCTCCCCACATGCTGAAACAGGAGTAA MEDYNNNNDDDQQQIIKIEDTSTITDGGGGGDGGGRGGGDGGVFSFSDNIIPNGLFDFCDGDKCSVGFMELLGLNYNSEFTEAFNNPPATPNCSSSVSSASSDALNDDEPPPPPPQQQQQQHSPTKQLKGIKKRKEKEKEKKARFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSAACNVKKRVERSFADPTVVVTTYEGQHTHPSPILSRSALAVAIPPPSFIPGAGGECVGGVVAMPWLKPSNNDAHDGNTVPAMSHQYFQNSTYITAQNVAANYNRNNHIGAANAAGILQEKRFCNPNSSFLVDHGLLQDVVPPHMLKQE
BLAST of CsaV3_3G026600 vs. NCBI nr
Match: XP_011651538.1 (PREDICTED: probable WRKY transcription factor 68 isoform X1 [Cucumis sativus] >XP_011651539.1 PREDICTED: probable WRKY transcription factor 68 isoform X1 [Cucumis sativus]) HSP 1 Score: 498.0 bits (1281), Expect = 2.4e-137 Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0
BLAST of CsaV3_3G026600 vs. NCBI nr
Match: XP_016900417.1 (PREDICTED: LOW QUALITY PROTEIN: probable WRKY transcription factor 68 [Cucumis melo]) HSP 1 Score: 444.5 bits (1142), Expect = 3.2e-121 Identity = 258/289 (89.27%), Postives = 264/289 (91.35%), Query Frame = 0
BLAST of CsaV3_3G026600 vs. NCBI nr
Match: ADU52532.1 (WRKY protein [Cucumis sativus]) HSP 1 Score: 441.8 bits (1135), Expect = 2.0e-120 Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0
BLAST of CsaV3_3G026600 vs. NCBI nr
Match: XP_011651540.1 (PREDICTED: probable WRKY transcription factor 68 isoform X2 [Cucumis sativus]) HSP 1 Score: 347.1 bits (889), Expect = 6.9e-92 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
BLAST of CsaV3_3G026600 vs. NCBI nr
Match: XP_022948546.1 (probable WRKY transcription factor 23 [Cucurbita moschata]) HSP 1 Score: 311.6 bits (797), Expect = 3.2e-81 Identity = 173/295 (58.64%), Postives = 192/295 (65.08%), Query Frame = 0
BLAST of CsaV3_3G026600 vs. TAIR10
Match: AT2G47260.1 (WRKY DNA-binding protein 23) HSP 1 Score: 156.0 bits (393), Expect = 4.1e-38 Identity = 94/188 (50.00%), Postives = 110/188 (58.51%), Query Frame = 0
BLAST of CsaV3_3G026600 vs. TAIR10
Match: AT3G62340.1 (WRKY family transcription factor) HSP 1 Score: 144.4 bits (363), Expect = 1.2e-34 Identity = 81/188 (43.09%), Postives = 111/188 (59.04%), Query Frame = 0
BLAST of CsaV3_3G026600 vs. TAIR10
Match: AT4G18170.1 (WRKY DNA-binding protein 28) HSP 1 Score: 142.1 bits (357), Expect = 6.1e-34 Identity = 88/195 (45.13%), Postives = 109/195 (55.90%), Query Frame = 0
BLAST of CsaV3_3G026600 vs. TAIR10
Match: AT1G29860.1 (WRKY DNA-binding protein 71) HSP 1 Score: 140.6 bits (353), Expect = 1.8e-33 Identity = 82/188 (43.62%), Postives = 106/188 (56.38%), Query Frame = 0
BLAST of CsaV3_3G026600 vs. TAIR10
Match: AT5G49520.1 (WRKY DNA-binding protein 48) HSP 1 Score: 138.7 bits (348), Expect = 6.7e-33 Identity = 81/199 (40.70%), Postives = 103/199 (51.76%), Query Frame = 0
BLAST of CsaV3_3G026600 vs. Swiss-Prot
Match: sp|O22900|WRK23_ARATH (WRKY transcription factor 23 OS=Arabidopsis thaliana OX=3702 GN=WRKY23 PE=2 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 7.3e-37 Identity = 94/188 (50.00%), Postives = 110/188 (58.51%), Query Frame = 0
BLAST of CsaV3_3G026600 vs. Swiss-Prot
Match: sp|Q93WV6|WRK68_ARATH (WRKY transcription factor 68 OS=Arabidopsis thaliana OX=3702 GN=WRKY68 PE=2 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 2.2e-33 Identity = 81/188 (43.09%), Postives = 111/188 (59.04%), Query Frame = 0
BLAST of CsaV3_3G026600 vs. Swiss-Prot
Match: sp|Q8VWJ2|WRK28_ARATH (WRKY transcription factor 28 OS=Arabidopsis thaliana OX=3702 GN=WRKY28 PE=2 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 1.1e-32 Identity = 88/195 (45.13%), Postives = 109/195 (55.90%), Query Frame = 0
BLAST of CsaV3_3G026600 vs. Swiss-Prot
Match: sp|Q93WV4|WRK71_ARATH (WRKY transcription factor 71 OS=Arabidopsis thaliana OX=3702 GN=WRKY71 PE=2 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 3.2e-32 Identity = 82/188 (43.62%), Postives = 106/188 (56.38%), Query Frame = 0
BLAST of CsaV3_3G026600 vs. Swiss-Prot
Match: sp|Q9FGZ4|WRK48_ARATH (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana OX=3702 GN=WRKY48 PE=2 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.2e-31 Identity = 81/199 (40.70%), Postives = 103/199 (51.76%), Query Frame = 0
BLAST of CsaV3_3G026600 vs. TrEMBL
Match: tr|A0A1S4DWQ9|A0A1S4DWQ9_CUCME (LOW QUALITY PROTEIN: probable WRKY transcription factor 68 OS=Cucumis melo OX=3656 GN=LOC103489912 PE=4 SV=1) HSP 1 Score: 444.5 bits (1142), Expect = 2.1e-121 Identity = 258/289 (89.27%), Postives = 264/289 (91.35%), Query Frame = 0
BLAST of CsaV3_3G026600 vs. TrEMBL
Match: tr|E7CEY9|E7CEY9_CUCSA (WRKY protein OS=Cucumis sativus OX=3659 GN=WRKY55 PE=2 SV=1) HSP 1 Score: 441.8 bits (1135), Expect = 1.4e-120 Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0
BLAST of CsaV3_3G026600 vs. TrEMBL
Match: tr|A0A2I4EXY3|A0A2I4EXY3_9ROSI (WRKY transcription factor OS=Juglans regia OX=51240 GN=LOC108993709 PE=3 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 2.6e-47 Identity = 155/311 (49.84%), Postives = 179/311 (57.56%), Query Frame = 0
BLAST of CsaV3_3G026600 vs. TrEMBL
Match: tr|A0A2I4GEI8|A0A2I4GEI8_9ROSI (WRKY transcription factor OS=Juglans regia OX=51240 GN=LOC109007199 PE=3 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 7.6e-47 Identity = 131/310 (42.26%), Postives = 171/310 (55.16%), Query Frame = 0
BLAST of CsaV3_3G026600 vs. TrEMBL
Match: tr|G8Z9V5|G8Z9V5_HEVBR (WRKY transcription factor OS=Hevea brasiliensis OX=3981 GN=WRKY1 PE=2 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 1.1e-45 Identity = 135/305 (44.26%), Postives = 159/305 (52.13%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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