CsaV3_3G023690 (gene) Cucumber (Chinese Long) v3

NameCsaV3_3G023690
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3 : 21476180 .. 21476333 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACGTCATGCGAGAACTTGATCCAAGACGTCGTGCGAGATATGAAATCGTTGTGGGTTTGCTTTAGAGGCGTCGTCGGAGAACTGGAACGAAATCGTTTGTTGGAGATCTGGAACAGAGGCAGTCATCGAACGTCAAAGACTGACGACG

mRNA sequence

ATGGAGACGTCATGCGAGAACTTGATCCAAGACGTCGTGCGAGATATGAAATCGTTGTGGGTTTGCTTTAGAGGCGTCGTCGGAGAACTGGAACGAAATCGTTTGTTGGAGATCTGGAACAGAGGCAGTCATCGAACGTCAAAGACTGACGACG

Coding sequence (CDS)

ATGGAGACGTCATGCGAGAACTTGATCCAAGACGTCGTGCGAGATATGAAATCGTTGTGGGTTTGCTTTAGAGGCGTCGTCGGAGAACTGGAACGAAATCGTTTGTTGGAGATCTGGAACAGAGGCAGTCATCGAACGTCAAAGACTGACGACG

Protein sequence

METSCENLIQDVVRDMKSLWVCFRGVVGELERNRLLEIWNRGSHRTSKTDDX
BLAST of CsaV3_3G023690 vs. NCBI nr
Match: KGN58040.1 (hypothetical protein Csa_3G455630 [Cucumis sativus])

HSP 1 Score: 59.7 bits (143), Expect = 3.4e-06
Identity = 27/27 (100.00%), Postives = 27/27 (100.00%), Query Frame = 0

Query: 25 GVVGELERNRLLEIWNRGSHRTSKTDD 52
          GVVGELERNRLLEIWNRGSHRTSKTDD
Sbjct: 43 GVVGELERNRLLEIWNRGSHRTSKTDD 69

BLAST of CsaV3_3G023690 vs. TrEMBL
Match: tr|A0A0A0L7Z8|A0A0A0L7Z8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G455630 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.3e-06
Identity = 27/27 (100.00%), Postives = 27/27 (100.00%), Query Frame = 0

Query: 25 GVVGELERNRLLEIWNRGSHRTSKTDD 52
          GVVGELERNRLLEIWNRGSHRTSKTDD
Sbjct: 43 GVVGELERNRLLEIWNRGSHRTSKTDD 69

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN58040.13.4e-06100.00hypothetical protein Csa_3G455630 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0L7Z8|A0A0A0L7Z8_CUCSA2.3e-06100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G455630 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G023690.1CsaV3_3G023690.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G023690CSPI03G23890Wild cucumber (PI 183967)cpicucB144
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G023690Silver-seed gourdcarcucB0780
CsaV3_3G023690Silver-seed gourdcarcucB1072
CsaV3_3G023690Cucumber (Gy14) v1cgycucB015
CsaV3_3G023690Cucumber (Gy14) v2cgybcucB029
CsaV3_3G023690Cucumber (Gy14) v2cgybcucB117
CsaV3_3G023690Cucumber (Gy14) v1cgycucB448
CsaV3_3G023690Cucurbita maxima (Rimu)cmacucB0150
CsaV3_3G023690Cucurbita maxima (Rimu)cmacucB0284
CsaV3_3G023690Cucurbita maxima (Rimu)cmacucB0427
CsaV3_3G023690Cucurbita maxima (Rimu)cmacucB0540
CsaV3_3G023690Cucurbita maxima (Rimu)cmacucB1059
CsaV3_3G023690Cucurbita moschata (Rifu)cmocucB0135
CsaV3_3G023690Cucurbita moschata (Rifu)cmocucB0275
CsaV3_3G023690Cucurbita moschata (Rifu)cmocucB0422
CsaV3_3G023690Cucurbita moschata (Rifu)cmocucB0524
CsaV3_3G023690Cucurbita moschata (Rifu)cmocucB1042
CsaV3_3G023690Cucurbita pepo (Zucchini)cpecucB0156
CsaV3_3G023690Cucurbita pepo (Zucchini)cpecucB0382
CsaV3_3G023690Cucurbita pepo (Zucchini)cpecucB0456
CsaV3_3G023690Cucurbita pepo (Zucchini)cpecucB0696
CsaV3_3G023690Cucurbita pepo (Zucchini)cpecucB0752
CsaV3_3G023690Cucurbita pepo (Zucchini)cpecucB0839
CsaV3_3G023690Wild cucumber (PI 183967)cpicucB035
CsaV3_3G023690Bottle gourd (USVL1VR-Ls)cuclsiB179
CsaV3_3G023690Bottle gourd (USVL1VR-Ls)cuclsiB195
CsaV3_3G023690Bottle gourd (USVL1VR-Ls)cuclsiB249
CsaV3_3G023690Bottle gourd (USVL1VR-Ls)cuclsiB255
CsaV3_3G023690Melon (DHL92) v3.5.1cucmeB197
CsaV3_3G023690Melon (DHL92) v3.5.1cucmeB220
CsaV3_3G023690Melon (DHL92) v3.6.1cucmedB188
CsaV3_3G023690Melon (DHL92) v3.6.1cucmedB213
CsaV3_3G023690Melon (DHL92) v3.6.1cucmedB228
CsaV3_3G023690Watermelon (Charleston Gray)cucwcgB192
CsaV3_3G023690Watermelon (Charleston Gray)cucwcgB223
CsaV3_3G023690Watermelon (Charleston Gray)cucwcgB263
CsaV3_3G023690Watermelon (97103) v1cucwmB191
CsaV3_3G023690Watermelon (97103) v1cucwmB223
CsaV3_3G023690Watermelon (97103) v1cucwmB226
CsaV3_3G023690Watermelon (97103) v2cucwmbB204
CsaV3_3G023690Watermelon (97103) v2cucwmbB243
CsaV3_3G023690Watermelon (97103) v2cucwmbB263
CsaV3_3G023690Wax gourdcucwgoB275
CsaV3_3G023690Wax gourdcucwgoB358
CsaV3_3G023690Silver-seed gourdcarcucB0135
CsaV3_3G023690Silver-seed gourdcarcucB0227