CsaV3_3G023270 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G023270
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionralf-like 9
Locationchr3 : 20830466 .. 20831252 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGTTTCACATTTCAAGTTTGTATAAGTTTTTGTCATAAAGGATGATCATGTCAAAGAGAATGACACTTGTTTTTATTGGGATTCTCTTGGTTAGCTTCGACATGATTATGATCACAAATGCAAAAAAATTCATTGATTACGGTTCTATTGTTGCAGGAGATGTTAGCCCTGGATGTAGCCCAACGCACCCTGAACTTTGTAGAGTAAAGAGCGCAAATCCATACCAAAGAGGTTGCAATCGAATCGATCGTTGTAGAGAGGGAAATGATATTATTGACGCTGAAGAAGAACATATTGAAGGGGATGCATCGATTAGTCCTTCAATAAGCCCTAATATAGAGAATTAAATCTTGATTGAATTGATATGATATAACATTTATTTATATTTATCTAAAACAAAATTATTTATGTCTAGTTATTTGATGAATGATTGAATAATGCAATCATTAGATGTCTGACAAGGCTTGAAAGCTATGTGTAATATGTAATTGGTAAGGTCGCTTAAAGGACAATTATGCAACAATATATGCTAATTTTTACGGAGAATTGAAAAATAGCTGCAAATGTAAGTAATTTGGAAAAGGTAAAGACTGACCAATTCACCTTGACAAAAAATTATTTGTAAAAACCCTTGCTTATTATTGTACTGTGGTGGCAAGTGAGGGTGTTGAACCCAGAGGAGTGGAGGTTATTCTTTCTTGAATTCGAACTAGAAAAGATTGTTCGAGAAACTAAGAAAGCGTTGATAGATTAAGCAAGAAATTTAAAGAACCATGATGTAAGAAG

mRNA sequence

ATGATCATGTCAAAGAGAATGACACTTGTTTTTATTGGGATTCTCTTGGTTAGCTTCGACATGATTATGATCACAAATGCAAAAAAATTCATTGATTACGGTTCTATTGTTGCAGGAGATGTTAGCCCTGGATGTAGCCCAACGCACCCTGAACTTTGTAGAGTAAAGAGCGCAAATCCATACCAAAGAGGTTGCAATCGAATCGATCGTTGTAGAGAGGGAAATGATATTATTGACGCTGAAGAAGAACATATTGAAGGGGATGCATCGATTAGTCCTTCAATAAGCCCTAATATAGAGAATTAA

Coding sequence (CDS)

ATGATCATGTCAAAGAGAATGACACTTGTTTTTATTGGGATTCTCTTGGTTAGCTTCGACATGATTATGATCACAAATGCAAAAAAATTCATTGATTACGGTTCTATTGTTGCAGGAGATGTTAGCCCTGGATGTAGCCCAACGCACCCTGAACTTTGTAGAGTAAAGAGCGCAAATCCATACCAAAGAGGTTGCAATCGAATCGATCGTTGTAGAGAGGGAAATGATATTATTGACGCTGAAGAAGAACATATTGAAGGGGATGCATCGATTAGTCCTTCAATAAGCCCTAATATAGAGAATTAA

Protein sequence

MIMSKRMTLVFIGILLVSFDMIMITNAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSANPYQRGCNRIDRCREGNDIIDAEEEHIEGDASISPSISPNIEN
Homology
[Close]
BLAST of CsaV3_3G023270 vs. NCBI nr
Match: KGN57998.1 (hypothetical protein Csa_3G426350 [Cucumis sativus])

HSP 1 Score: 201.8 bits (512), Expect = 1.1e-48
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MIMSKRMTLVFIGILLVSFDMIMITNAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSANP 60
           MIMSKRMTLVFIGILLVSFDMIMITNA+KFIDYGSIVAGDVSPGCSPTHPELCRVKSANP
Sbjct: 1   MIMSKRMTLVFIGILLVSFDMIMITNARKFIDYGSIVAGDVSPGCSPTHPELCRVKSANP 60

Query: 61  YQRGCNRIDRCREGNDIIDAEEEHIEGDASISPSISPNIEN 102
           YQRGCNRIDRCREGNDIIDAEEEHIEGDASISPSISPNIEN
Sbjct: 61  YQRGCNRIDRCREGNDIIDAEEEHIEGDASISPSISPNIEN 101

[Close]
BLAST of CsaV3_3G023270 vs. NCBI nr
Match: XP_022159360.1 (uncharacterized protein LOC111025777 [Momordica charantia])

HSP 1 Score: 108.6 bits (270), Expect = 1.3e-20
Identity = 55/89 (61.80%), Postives = 65/89 (73.03%), Query Frame = 0 

Query: 1  MIMSKRMTLVFIGILLVSFDMIMITNAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSANP 60
          M +SK    +F+GILL    MI ITNA +FI Y  +  GDVSPGCSPTHPELC++ SANP
Sbjct: 1  MAISKGSMFIFVGILLYCMGMIDITNATRFIHYDPL-RGDVSPGCSPTHPELCKLHSANP 60

Query: 61 YQRGCNRIDRCREGNDIIDAEEEHIEGDA 90
          Y+RGC  IDRCR G+DIID  E  +EGDA
Sbjct: 61 YKRGCTSIDRCRGGSDIIDDAEMIVEGDA 88

[Close]
BLAST of CsaV3_3G023270 vs. NCBI nr
Match: XP_022136918.1 (uncharacterized protein LOC111008495 [Momordica charantia])

HSP 1 Score: 93.2 bits (230), Expect = 5.5e-16
Identity = 53/89 (59.55%), Postives = 67/89 (75.28%), Query Frame = 0 

Query: 1  MIMSKRMTLVFIGILLVSFDMIMITNAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSANP 60
          M+  K   LVFIGILLVSF MI ITNA ++I+Y ++   DVSPGCSP HP LC++  AN 
Sbjct: 1  MMTPKGSMLVFIGILLVSFRMIEITNAIQYINYHALKT-DVSPGCSPKHPGLCKLHEANS 60

Query: 61 YQRGCNRIDRCREGNDIIDAEEEHIEGDA 90
          YQRGC+ I+RCR  +D ID+EE+ I+GDA
Sbjct: 61 YQRGCSAINRCRR-DDYIDSEEK-IKGDA 86

[Close]
BLAST of CsaV3_3G023270 vs. NCBI nr
Match: XP_022961577.1 (protein RALF-like 9 [Cucurbita moschata])

HSP 1 Score: 80.1 bits (196), Expect = 4.8e-12
Identity = 43/79 (54.43%), Postives = 54/79 (68.35%), Query Frame = 0 

Query: 3  MSKRMTLVFIGILLVSFDMIMITNAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSANPYQ 62
          MSK   ++FI +L VS +MI ITNA  +I+Y  +   +    CSPTHP+LC+   ANPYQ
Sbjct: 1  MSKGTMIIFIVVLFVSINMIEITNATHYINYDPL-KKNRDLVCSPTHPDLCKTTPANPYQ 60

Query: 63 RGCNRIDRCR--EGNDIID 80
          RGCN IDRCR  E +DIID
Sbjct: 61 RGCNPIDRCRGAESDDIID 78

[Close]
BLAST of CsaV3_3G023270 vs. NCBI nr
Match: PNX70961.1 (hypothetical protein L195_g057917 [Trifolium pratense])

HSP 1 Score: 75.9 bits (185), Expect = 9.0e-11
Identity = 38/72 (52.78%), Postives = 46/72 (63.89%), Query Frame = 0 

Query: 3  MSKRMTLVFIGILLVSFDMIMITNAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSANPYQ 62
          M+K M +VF+  LL+         AKKFI YG+I   D+SPGCSP HPELC+   ANPY+
Sbjct: 1  MAKTMLVVFLSALLICTFFTQDVEAKKFIGYGAI-GRDISPGCSPKHPELCKFHPANPYR 60

Query: 63 RGCNRIDRCREG 75
          RGC    RCR G
Sbjct: 61 RGCEAEMRCRGG 71

[Close]
BLAST of CsaV3_3G023270 vs. TAIR10
Match: AT1G61566.1 (ralf-like 9)

HSP 1 Score: 57.4 bits (137), Expect = 6.0e-09
Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 0 

Query: 1  MIMSKRMTLVFIGILLVSFDMIMIT--NAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSA 60
          M MSK +  V + + LV F  +  T   A ++I Y +I  GD +  C   HP  C+ K A
Sbjct: 1  MGMSKSIK-VILSLALVVFLALAATKVEATRYITYPAIDRGDHAVHCDKAHPNTCKKKEA 60

Query: 61 NPYQRGCNRIDRCREG 75
          NPYQRGC +I+RCR G
Sbjct: 61 NPYQRGCEKINRCRGG 75

[Close]
BLAST of CsaV3_3G023270 vs. TAIR10
Match: AT2G22055.1 (RALF-like 15)

HSP 1 Score: 49.3 bits (116), Expect = 1.6e-06
Identity = 28/74 (37.84%), Postives = 41/74 (55.41%), Query Frame = 0 

Query: 1  MIMSKRMTLVFIGILLVSFDMIMIT--NAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSA 60
          M MSK +  V + + L+ F  +  T   A ++I Y  +  GD +  C   HP  C+ + A
Sbjct: 1  MGMSKSIK-VIVSLALILFLALAATKVEATRYISYRGMNHGDHAIHCDKAHPNTCKKQVA 60

Query: 61 NPYQRGCNRIDRCR 73
          NPY+RGC  I+RCR
Sbjct: 61 NPYRRGCGTIERCR 73

[Close]
BLAST of CsaV3_3G023270 vs. TAIR10
Match: AT1G61563.1 (ralf-like 8)

HSP 1 Score: 45.1 bits (105), Expect = 3.1e-05
Identity = 27/74 (36.49%), Postives = 40/74 (54.05%), Query Frame = 0 

Query: 1  MIMSKRMTLVFIGILLVSFDMIMITNAK---KFIDYGSIVAGDVSPGCSPTHPELCRVKS 60
          M MSK +  V + + LV F  +  T  +   ++I Y +I  GD +  C   HP  C+ K 
Sbjct: 1  MGMSKSIK-VILSLALVVFLALAGTKVEASVRYITYPAIDRGDHAVHCDKAHPNTCKKKQ 60

Query: 61 ANPYQRGCNRIDRC 72
          ANPY+RGC  ++ C
Sbjct: 61 ANPYRRGCGVLEGC 73

[Close]
BLAST of CsaV3_3G023270 vs. TAIR10
Match: AT4G11653.1 (RALF-like 29)

HSP 1 Score: 42.4 bits (98), Expect = 2.0e-04
Identity = 28/74 (37.84%), Postives = 40/74 (54.05%), Query Frame = 0 

Query: 1  MIMSKRMTLVFIGILLVSFDMIMITNAKKFIDYGSIVAGDVSPGCSPTHPELCRVK--SA 60
          MI +K +T  F+ IL+V    I   +AK++I+Y   +  D+  GC P  P     K   A
Sbjct: 1  MIKTKEVT--FVTILIVLCVFISTIHAKRYIEYP--IRLDLGKGCDPRFPTAACYKRTPA 60

Query: 61 NPYQRGCNRIDRCR 73
          NPY+R C   +RCR
Sbjct: 61 NPYRRPCTTANRCR 70

[Close]
BLAST of CsaV3_3G023270 vs. TAIR10
Match: AT1G23147.1 (RALF-like 3)

HSP 1 Score: 40.8 bits (94), Expect = 5.8e-04
Identity = 28/73 (38.36%), Postives = 39/73 (53.42%), Query Frame = 0 

Query: 15 LLVSFDMIMITN--AKKFIDYGSIVAG--------DVSP----GCSPTHPELCRVKS-AN 73
          +LVSF  + I N  A+K I Y     G        +++P    GC P +P+ C  K  AN
Sbjct: 15 VLVSFVFLSIMNAEARKEIGYPKQRFGEDRTNPYEEITPPLIGGCDPKNPQTCLPKQPAN 74

[Close]
BLAST of CsaV3_3G023270 vs. Swiss-Prot
Match: sp|Q3ECL0|RLF9_ARATH (Protein RALF-like 9 OS=Arabidopsis thaliana OX=3702 GN=RALFL9 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.1e-07
Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 0 

Query: 1  MIMSKRMTLVFIGILLVSFDMIMIT--NAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSA 60
          M MSK +  V + + LV F  +  T   A ++I Y +I  GD +  C   HP  C+ K A
Sbjct: 1  MGMSKSIK-VILSLALVVFLALAATKVEATRYITYPAIDRGDHAVHCDKAHPNTCKKKEA 60

Query: 61 NPYQRGCNRIDRCREG 75
          NPYQRGC +I+RCR G
Sbjct: 61 NPYQRGCEKINRCRGG 75

[Close]
BLAST of CsaV3_3G023270 vs. Swiss-Prot
Match: sp|A8MQM7|RLF15_ARATH (Protein RALF-like 15 OS=Arabidopsis thaliana OX=3702 GN=RALFL15 PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 3.0e-05
Identity = 28/74 (37.84%), Postives = 41/74 (55.41%), Query Frame = 0 

Query: 1  MIMSKRMTLVFIGILLVSFDMIMIT--NAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSA 60
          M MSK +  V + + L+ F  +  T   A ++I Y  +  GD +  C   HP  C+ + A
Sbjct: 1  MGMSKSIK-VIVSLALILFLALAATKVEATRYISYRGMNHGDHAIHCDKAHPNTCKKQVA 60

Query: 61 NPYQRGCNRIDRCR 73
          NPY+RGC  I+RCR
Sbjct: 61 NPYRRGCGTIERCR 73

[Close]
BLAST of CsaV3_3G023270 vs. Swiss-Prot
Match: sp|Q1ECR9|RLF8_ARATH (Protein RALF-like 8 OS=Arabidopsis thaliana OX=3702 GN=RALFL8 PE=2 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 5.6e-04
Identity = 27/74 (36.49%), Postives = 40/74 (54.05%), Query Frame = 0 

Query: 1  MIMSKRMTLVFIGILLVSFDMIMITNAK---KFIDYGSIVAGDVSPGCSPTHPELCRVKS 60
          M MSK +  V + + LV F  +  T  +   ++I Y +I  GD +  C   HP  C+ K 
Sbjct: 1  MGMSKSIK-VILSLALVVFLALAGTKVEASVRYITYPAIDRGDHAVHCDKAHPNTCKKKQ 60

Query: 61 ANPYQRGCNRIDRC 72
          ANPY+RGC  ++ C
Sbjct: 61 ANPYRRGCGVLEGC 73

[Close]
BLAST of CsaV3_3G023270 vs. TrEMBL
Match: tr|A0A0A0L8B1|A0A0A0L8B1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G426350 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 7.2e-49
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MIMSKRMTLVFIGILLVSFDMIMITNAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSANP 60
           MIMSKRMTLVFIGILLVSFDMIMITNA+KFIDYGSIVAGDVSPGCSPTHPELCRVKSANP
Sbjct: 1   MIMSKRMTLVFIGILLVSFDMIMITNARKFIDYGSIVAGDVSPGCSPTHPELCRVKSANP 60

Query: 61  YQRGCNRIDRCREGNDIIDAEEEHIEGDASISPSISPNIEN 102
           YQRGCNRIDRCREGNDIIDAEEEHIEGDASISPSISPNIEN
Sbjct: 61  YQRGCNRIDRCREGNDIIDAEEEHIEGDASISPSISPNIEN 101

[Close]
BLAST of CsaV3_3G023270 vs. TrEMBL
Match: tr|A0A2K3KXF8|A0A2K3KXF8_TRIPR (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g057917 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.0e-11
Identity = 38/72 (52.78%), Postives = 46/72 (63.89%), Query Frame = 0 

Query: 3  MSKRMTLVFIGILLVSFDMIMITNAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSANPYQ 62
          M+K M +VF+  LL+         AKKFI YG+I   D+SPGCSP HPELC+   ANPY+
Sbjct: 1  MAKTMLVVFLSALLICTFFTQDVEAKKFIGYGAI-GRDISPGCSPKHPELCKFHPANPYR 60

Query: 63 RGCNRIDRCREG 75
          RGC    RCR G
Sbjct: 61 RGCEAEMRCRGG 71

[Close]
BLAST of CsaV3_3G023270 vs. TrEMBL
Match: tr|A0A2K3K5H7|A0A2K3K5H7_TRIPR (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g052511 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.6e-08
Identity = 35/72 (48.61%), Postives = 43/72 (59.72%), Query Frame = 0 

Query: 3  MSKRMTLVFIGILLVSFDMIMITNAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSANPYQ 62
          M+K M +VF+  LL+         AKKFI YG+I   D   GCSP  PELC++  ANPY+
Sbjct: 1  MAKTMLVVFLSALLICTSFTQDVEAKKFIGYGAI-GRDRGVGCSPRTPELCKLHPANPYR 60

Query: 63 RGCNRIDRCREG 75
          RGC    RCR G
Sbjct: 61 RGCEAEMRCRGG 71

[Close]
BLAST of CsaV3_3G023270 vs. TrEMBL
Match: tr|A0A2K3LHF9|A0A2K3LHF9_TRIPR (Protein RALF-like 16-like OS=Trifolium pratense OX=57577 GN=L195_g033950 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.4e-07
Identity = 33/72 (45.83%), Postives = 46/72 (63.89%), Query Frame = 0 

Query: 3  MSKRMTLVFIGILLVSFDMIMITNAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSANPYQ 62
          M+K M ++F+  L++S        AK+ I YG+ +  D  PGCSPTHPE C+ K ANPY 
Sbjct: 1  MAKTMLVLFLSALMISSLFTQHVEAKE-IGYGA-MGRDRGPGCSPTHPENCKDKPANPYT 60

Query: 63 RGCNRIDRCREG 75
          RGC + ++CR G
Sbjct: 61 RGCEKENKCRGG 70

[Close]
BLAST of CsaV3_3G023270 vs. TrEMBL
Match: tr|V4UF46|V4UF46_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10018043mg PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.1e-07
Identity = 35/75 (46.67%), Postives = 50/75 (66.67%), Query Frame = 0 

Query: 1  MIMSKRMTLVFIGILLVSFDMIMITN---AKKFIDYGSIVAGDVSPGCSPTHPELCRVKS 60
          M+MSKRM +VF  I++++  ++M+       K I YG+I AG  +PGCSP HPELC+++ 
Sbjct: 1  MMMSKRM-MVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGG-NPGCSPVHPELCKMEP 60

Query: 61 ANPYQRGCNRIDRCR 73
           NPY RGC    +CR
Sbjct: 61 GNPYHRGCENEAQCR 73

The following BLAST results are available for this feature:
BLAST of CsaV3_3G023270 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57998.11.1e-4899.01hypothetical protein Csa_3G426350 [Cucumis sativus][more]
XP_022159360.11.3e-2061.80uncharacterized protein LOC111025777 [Momordica charantia][more]
XP_022136918.15.5e-1659.55uncharacterized protein LOC111008495 [Momordica charantia][more]
XP_022961577.14.8e-1254.43protein RALF-like 9 [Cucurbita moschata][more]
PNX70961.19.0e-1152.78hypothetical protein L195_g057917 [Trifolium pratense][more]
BLAST of CsaV3_3G023270 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G61566.16.0e-0943.42ralf-like 9[more]
AT2G22055.11.6e-0637.84RALF-like 15[more]
AT1G61563.13.1e-0536.49ralf-like 8[more]
AT4G11653.12.0e-0437.84RALF-like 29[more]
AT1G23147.15.8e-0438.36RALF-like 3[more]
BLAST of CsaV3_3G023270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q3ECL0|RLF9_ARATH1.1e-0743.42Protein RALF-like 9 OS=Arabidopsis thaliana OX=3702 GN=RALFL9 PE=3 SV=1[more]
sp|A8MQM7|RLF15_ARATH3.0e-0537.84Protein RALF-like 15 OS=Arabidopsis thaliana OX=3702 GN=RALFL15 PE=3 SV=1[more]
sp|Q1ECR9|RLF8_ARATH5.6e-0436.49Protein RALF-like 8 OS=Arabidopsis thaliana OX=3702 GN=RALFL8 PE=2 SV=1[more]
BLAST of CsaV3_3G023270 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L8B1|A0A0A0L8B1_CUCSA7.2e-4999.01Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G426350 PE=4 SV=1[more]
tr|A0A2K3KXF8|A0A2K3KXF8_TRIPR6.0e-1152.78Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g057917 PE=4 SV=1[more]
tr|A0A2K3K5H7|A0A2K3K5H7_TRIPR3.6e-0848.61Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g052511 PE=4 SV=1[more]
tr|A0A2K3LHF9|A0A2K3LHF9_TRIPR2.4e-0745.83Protein RALF-like 16-like OS=Trifolium pratense OX=57577 GN=L195_g033950 PE=4 SV... [more]
tr|V4UF46|V4UF46_9ROSI3.1e-0746.67Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10018043mg PE=4 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008801RALF
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G023270.1CsaV3_3G023270.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008801Rapid ALkalinization FactorPFAMPF05498RALFcoord: 26..72
e-value: 2.4E-8
score: 34.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..101
NoneNo IPR availablePANTHERPTHR34270FAMILY NOT NAMEDcoord: 1..74

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G023270CSPI03G23470Wild cucumber (PI 183967)cpicucB144
CsaV3_3G023270Cucsa.017030Cucumber (Gy14) v1cgycucB375
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G023270Silver-seed gourdcarcucB0941
CsaV3_3G023270Silver-seed gourdcarcucB1059
CsaV3_3G023270Cucumber (Gy14) v2cgybcucB117
CsaV3_3G023270Cucurbita maxima (Rimu)cmacucB0022
CsaV3_3G023270Cucurbita maxima (Rimu)cmacucB0549
CsaV3_3G023270Cucurbita moschata (Rifu)cmocucB0010
CsaV3_3G023270Cucurbita moschata (Rifu)cmocucB0534
CsaV3_3G023270Cucurbita pepo (Zucchini)cpecucB0688
CsaV3_3G023270Cucurbita pepo (Zucchini)cpecucB0965
CsaV3_3G023270Bottle gourd (USVL1VR-Ls)cuclsiB213
CsaV3_3G023270Melon (DHL92) v3.5.1cucmeB207
CsaV3_3G023270Melon (DHL92) v3.6.1cucmedB200
CsaV3_3G023270Watermelon (Charleston Gray)cucwcgB242
CsaV3_3G023270Watermelon (97103) v1cucwmB191
CsaV3_3G023270Watermelon (97103) v1cucwmB257
CsaV3_3G023270Watermelon (97103) v2cucwmbB221