CsaV3_3G023120 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G023120
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	protein NDR1-like
Location	chr3 : 20632920 .. 20634105 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAAAAAAAAAATGGTGCATTTGGTTTAGGGCGCTATATTTGTGTTATATACACATATATAGTTTTGAAAGATTTGTATTACAATTTACAACTTTTGGAGAGGGAAAAAGAGTTGCCTTCCCTCCACTAAGTTTTCTTAATCTGTGGTCGGTCCCATCCCATCCCATCTGGGCTCTCTTTTCTTTACCCCCAACAGCATTATTGTACCCTTTTTTTTATTCTCTTCTCATTTCTTTCTTCTTTTTCTTCTCCATTCTCACCGGAACCTATTTCTTATTCTCTGGCAAACATGGCGGAATCCGGCTGGTGCTGCAAGTGCTGCTTCAAGTTCATCATAACAGCCGGCTTTTCAGCTCTGTTTTTATGGTTAAGCCTTCGAACCCGCAAACCCAAATGCTCAATCGAATTTTTCTACATTCCAGCCTTAAATCAATCCCTAAATTCTTCCTCGAATTCCTCCCTCATCTTCGATCTGCGTCTCAAAAACCAGAACAAAGAAAAATCCGTCTACTATGACACTATCTATCTCAACCTCACGCTCCTCGACGAAACTCGCCGCCTGGTGGGTAACTTGACGGTACCTGGTTTCCATCAAGGCCGCGACAAGAAGGCGTTGAGGAAGGAGTCCTTCGAGGCCCGTGGAGTTGATTGGAAGGCGGTTTCCCGTAATGGGTCAACGGTTATCCGGCTGGATTTGGCGACGGCGGTCAGGTACAAGATCTTGCTGTGGAAGACCAAGAGGGAGAATTTGAGACTCGGAACAGAGGTCAAAGTCAACGAACAGGGAGTCAAGGACAACCCACATGGAATCACGCTCAACTCTGGCGCCGCCGTGCCCGTCGGCTCGCTGGTGAGGGTTATTTGGAGCTTTTGGGTGTTTGTTTTGTGGATAATTTTTTGAAATTAAACCTCAACTGTGTTTCTTGTTGTGGGTTTGTTTGATTTAGTCGAATTTTTGGGCGGCGTTTTTAGTCGGAAGTGTTCTCCACCGCCCACTCACGGCTGACGTTAGATGGTACATAAATTAATTTTTGGTTGAATAAAATATTTATGTGTTCCATTTTGGAAAGTTTTATTTTAGTCAAATTACAACTTATCTCGCATTTCTCCCTATTTTATTTCTATTTTGATTTTTAAGGCTTTTAAAGCATGAAATAGGGAGGATAGCCATTTTAGAAATAATAAT

mRNA sequence

ATGGCGGAATCCGGCTGGTGCTGCAAGTGCTGCTTCAAGTTCATCATAACAGCCGGCTTTTCAGCTCTGTTTTTATGGTTAAGCCTTCGAACCCGCAAACCCAAATGCTCAATCGAATTTTTCTACATTCCAGCCTTAAATCAATCCCTAAATTCTTCCTCGAATTCCTCCCTCATCTTCGATCTGCGTCTCAAAAACCAGAACAAAGAAAAATCCGTCTACTATGACACTATCTATCTCAACCTCACGCTCCTCGACGAAACTCGCCGCCTGGTGGGTAACTTGACGGTACCTGGTTTCCATCAAGGCCGCGACAAGAAGGCGTTGAGGAAGGAGTCCTTCGAGGCCCGTGGAGTTGATTGGAAGGCGGTTTCCCGTAATGGGTCAACGGTTATCCGGCTGGATTTGGCGACGGCGGTCAGGTACAAGATCTTGCTGTGGAAGACCAAGAGGGAGAATTTGAGACTCGGAACAGAGGTCAAAGTCAACGAACAGGGAGTCAAGGACAACCCACATGGAATCACGCTCAACTCTGGCGCCGCCGTGCCCGTCGGCTCGCTGGTGAGGGTTATTTGGAGCTTTTGGGTGTTTGTTTTGTGGATAATTTTTTGA

Coding sequence (CDS)

ATGGCGGAATCCGGCTGGTGCTGCAAGTGCTGCTTCAAGTTCATCATAACAGCCGGCTTTTCAGCTCTGTTTTTATGGTTAAGCCTTCGAACCCGCAAACCCAAATGCTCAATCGAATTTTTCTACATTCCAGCCTTAAATCAATCCCTAAATTCTTCCTCGAATTCCTCCCTCATCTTCGATCTGCGTCTCAAAAACCAGAACAAAGAAAAATCCGTCTACTATGACACTATCTATCTCAACCTCACGCTCCTCGACGAAACTCGCCGCCTGGTGGGTAACTTGACGGTACCTGGTTTCCATCAAGGCCGCGACAAGAAGGCGTTGAGGAAGGAGTCCTTCGAGGCCCGTGGAGTTGATTGGAAGGCGGTTTCCCGTAATGGGTCAACGGTTATCCGGCTGGATTTGGCGACGGCGGTCAGGTACAAGATCTTGCTGTGGAAGACCAAGAGGGAGAATTTGAGACTCGGAACAGAGGTCAAAGTCAACGAACAGGGAGTCAAGGACAACCCACATGGAATCACGCTCAACTCTGGCGCCGCCGTGCCCGTCGGCTCGCTGGTGAGGGTTATTTGGAGCTTTTGGGTGTTTGTTTTGTGGATAATTTTTTGA

Protein sequence

MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIFDLRLKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRKESFEARGVDWKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGAAVPVGSLVRVIWSFWVFVLWIIF

Homology

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BLAST of CsaV3_3G023120 vs. NCBI nr
Match: XP_004152027.1 (PREDICTED: protein NDR1-like [Cucumis sativus])

HSP 1 Score: 407.5 bits (1046), Expect = 2.6e-110
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF 60
           MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF
Sbjct: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF 60

Query: 61  DLRLKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRKESFEARGVD 120
           DLRLKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRKESFEARGVD
Sbjct: 61  DLRLKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRKESFEARGVD 120

Query: 121 WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGA 180
           WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGA
Sbjct: 121 WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGA 180

Query: 181 AVPVGSLVRVIWSFWVFVLWIIF 204
           AVPVGSLVRVIWSFWVFVLWIIF
Sbjct: 181 AVPVGSLVRVIWSFWVFVLWIIF 203

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BLAST of CsaV3_3G023120 vs. NCBI nr
Match: KGN57988.1 (hypothetical protein Csa_3G418790 [Cucumis sativus])

HSP 1 Score: 375.2 bits (962), Expect = 1.4e-100
Identity = 190/199 (95.48%), Postives = 191/199 (95.98%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF 60
           MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF
Sbjct: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF 60

Query: 61  DLRLKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRKESFEARGVD 120
           DLRLKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRKESFEARGVD
Sbjct: 61  DLRLKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRKESFEARGVD 120

Query: 121 WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGA 180
           WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGA
Sbjct: 121 WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGA 180

Query: 181 AVPVGSLVRVIWSFWVFVL 200
           AVPVGSL     +FW   L
Sbjct: 181 AVPVGSLS----NFWAAFL 195

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BLAST of CsaV3_3G023120 vs. NCBI nr
Match: XP_008454544.1 (PREDICTED: protein NDR1-like [Cucumis melo])

HSP 1 Score: 367.9 bits (943), Expect = 2.3e-98
Identity = 181/201 (90.05%), Postives = 190/201 (94.53%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNS-SLI 60
           M ESGWCCKCCFKFIITAGF+ALFLWLSLRTRKPKCSIE FYIPALNQSLNSSSNS +L 
Sbjct: 1   MTESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSSSNSTTLY 60

Query: 61  FDLRLKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRKESFEARGV 120
           FDLRLKNQNK+KSVYYDTIYLN TLLDE RR VGNLTVPGFHQGRDKKALRKES EARGV
Sbjct: 61  FDLRLKNQNKDKSVYYDTIYLNFTLLDEARRPVGNLTVPGFHQGRDKKALRKESVEARGV 120

Query: 121 DWKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSG 180
           DWKAVSRNGST++RLDLATAVRYKILLWKTKRENLRLGTE+KVN QG+KDNPHGITLNSG
Sbjct: 121 DWKAVSRNGSTIVRLDLATAVRYKILLWKTKRENLRLGTEIKVNGQGLKDNPHGITLNSG 180

Query: 181 AAVPVGSLVRVIWSFWVFVLW 201
           AA+P G+LVRVIWSFWVFV W
Sbjct: 181 AAMPGGTLVRVIWSFWVFVWW 201

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BLAST of CsaV3_3G023120 vs. NCBI nr
Match: XP_022935836.1 (protein NDR1-like [Cucurbita moschata])

HSP 1 Score: 300.1 bits (767), Expect = 5.9e-78
Identity = 151/207 (72.95%), Postives = 172/207 (83.09%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF 60
           M E G CC+CCF FI+T+GF+ALFLWLSLRTRKPKCSIE FYIPALNQSLNS  NS++ F
Sbjct: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKEKSVYYDTIYLNLTLLDE----TRRLVGNLTVPGFHQGRDKKALRKESFEA 120
           DLRLKNQNK+KSV+YD++ LNLTL+      +RR +GN+TVPGFHQGR KKA R E+ E 
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNETIET 120

Query: 121 RGVDWKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITL 180
           RGVDWKAVSRNG+ V RLDLATAVR+KIL W TKRENLR+G E KVNEQG  + P GITL
Sbjct: 121 RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYP-GITL 180

Query: 181 NSGAAVPVGSLVRVIWSFWVFVLWIIF 204
           +SG AVP GS VRVIWSFWVFVLW +F
Sbjct: 181 SSGVAVPDGSPVRVIWSFWVFVLWKLF 206

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BLAST of CsaV3_3G023120 vs. NCBI nr
Match: XP_023535135.1 (protein NDR1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 298.5 bits (763), Expect = 1.7e-77
Identity = 151/203 (74.38%), Postives = 171/203 (84.24%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF 60
           M ESG CC+CCF FI+T+GF+ALFLWLSLRTRKPKCSIE FYIPALNQSLNS  NS++ F
Sbjct: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRKESFEARGVD 120
           DLRLKNQNK+KSV+YD++ LNLTL+   RR +GN+TVPGFHQGR KKA R E+ E RGVD
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVG--RRPLGNVTVPGFHQGRGKKAFRNETIETRGVD 120

Query: 121 WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGA 180
           WKAVSRNGS + RLDLATAVR+KIL W TKRENLR+G E KVN QG  + P GITL+SGA
Sbjct: 121 WKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNGQGATEYP-GITLSSGA 180

Query: 181 AVPVGSLVRVIWSFWVFVLWIIF 204
           AV  GS VRVIWSFWVFVLW +F
Sbjct: 181 AVLDGSPVRVIWSFWVFVLWKLF 200

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BLAST of CsaV3_3G023120 vs. TAIR10
Match: AT3G20600.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 161.4 bits (407), Expect = 5.9e-40
Identity = 92/202 (45.54%), Postives = 125/202 (61.88%), Query Frame = 0


Query: 7   CCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIFDLRLKN 66
           CC CC  FI TAG ++LFLWLSLR  KPKCSI+ F+IPAL +  NS  N++L F +R  N
Sbjct: 14  CCTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNSRDNTTLNFMVRCDN 73

Query: 67  QNKEKSVYYDTIYLNLTLLDETR------RLVGNLTVPGFHQGRDKKALRKESFEA--RG 126
            NK+K +YYD ++LN + ++ T+       LVGN TVP F+QG  KKA +    +     
Sbjct: 74  PNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKKKAKKWGQVKPLNNQ 133

Query: 127 VDWKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITL-N 186
              +AV  NGS V RLDL T VR+KI+ WKTKR  + +G +V+VN  GVK    GI +  
Sbjct: 134 TVLRAVLPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGDGVKAQKKGIKMKK 193

Query: 187 SGAAVPVGSL--VRVIWSFWVF 198
           S ++ P+ S   + V+ +  VF
Sbjct: 194 SDSSFPLRSSFPISVLMNLLVF 215

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BLAST of CsaV3_3G023120 vs. TAIR10
Match: AT3G20590.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 147.5 bits (371), Expect = 8.9e-36
Identity = 85/185 (45.95%), Postives = 112/185 (60.54%), Query Frame = 0


Query: 7   CCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIFDLRLKN 66
           CC C FKFI T    AL LWLSLR +KPKCSI+ FYIPAL+++L+S  N++L F +R  N
Sbjct: 14  CCTCFFKFIFTTRLGALILWLSLRAKKPKCSIQNFYIPALSKNLSSRDNTTLNFMVRCDN 73

Query: 67  QNKEKSVYYDTIYLNLTLLDETRR------LVGNLTVPGFHQGRDKKALRKESFEARGVD 126
            NK+K +YYD ++L  + ++ T        LV N TVP F+QG  KKA      +  G  
Sbjct: 74  PNKDKGIYYDDVHLTFSTINTTTTNSSDLVLVANYTVPKFYQGHKKKA------KKWGQV 133

Query: 127 W--------KAVSRNGSTVIRLDLATAVRYKILLWKTK-RENLRLGTEVKVNEQGVKDNP 177
           W        +AV  NGS V RLDL T VR+KI+ WKTK    +++G +V+VN  GVK N 
Sbjct: 134 WPLNNQTVLRAVLPNGSAVFRLDLKTHVRFKIVFWKTKWYRRIKVGADVEVNGDGVKANE 192

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BLAST of CsaV3_3G023120 vs. TAIR10
Match: AT3G20610.1 (non-race specific disease resistance protein, putative)

HSP 1 Score: 120.6 bits (301), Expect = 1.2e-27
Identity = 81/192 (42.19%), Postives = 117/192 (60.94%), Query Frame = 0


Query: 22  ALFLWLS-LRTRKPKCSIEFFYIPALNQSLNSSSNSSLIFDLRLKNQNKEKSVYYDTIYL 81
           AL LWLS L    P+CSI +FYIPALN+SL SS N++L F +RLKN N ++ +YY+ ++L
Sbjct: 28  ALCLWLSTLVHHIPRCSIHYFYIPALNKSLISSDNTTLNFMVRLKNINAKQGIYYEDLHL 87

Query: 82  NL-TLLDETRRLVGNLTVPGFHQGRDKKALR---KESFEARGVDWKAVSRNGSTVIRLDL 141
           +  T ++ +  LV N TVP F+QG +KKA +      F  + V  +AV  NGS + R+DL
Sbjct: 88  SFSTRINNSSLLVANYTVPRFYQGHEKKAKKWGQALPFNNQTV-IQAVLPNGSAIFRVDL 147

Query: 142 ATAVRYKILLWKTKRENLRLGTEVKVNEQG---VKDNPHGITLNSGAAVPVG-SLVRVIW 201
              V+YK++ WKTKR  L+    ++VNE G   VKD   GI +    + P   +  +V +
Sbjct: 148 KMQVKYKVMSWKTKRYKLKASVNLEVNEDGATKVKDKEDGIKMKISDSSPQRLTFFQVCF 207

Query: 202 S-FWVFVLWIIF 204
           S   V + W+IF
Sbjct: 208 SIICVLMNWLIF 218

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BLAST of CsaV3_3G023120 vs. TAIR10
Match: AT4G05220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 55.5 bits (132), Expect = 4.6e-08
Identity = 42/171 (24.56%), Postives = 74/171 (43.27%), Query Frame = 0


Query: 4   SGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIFDLR 63
           S + C      +   G  A  LWLSLR  +P+  I+ F +  L+Q      N+ + F++ 
Sbjct: 43  SKFICAMFLLVLFFVGVIAFILWLSLRPHRPRFHIQDFVVQGLDQP-TGVENARIAFNVT 102

Query: 64  LKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKK----ALRKESFEARGV 123
           + N N+   VY+D++  ++   D+   L+  L  P F Q  +       L   S      
Sbjct: 103 ILNPNQHMGVYFDSMEGSIYYKDQRVGLIPLLN-PFFQQPTNTTIVTGTLTGASLTVNSN 162

Query: 124 DWKAVSRN---GSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGV 168
            W   S +   G+   RLD+ + +R+K+  W +K   +     + V   G+
Sbjct: 163 RWTEFSNDRAQGTVGFRLDIVSTIRFKLHRWISKHHRMHANCNIVVGRDGL 211

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BLAST of CsaV3_3G023120 vs. Swiss-Prot
Match: sp|O48915|NDR1_ARATH (Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-38
Identity = 92/202 (45.54%), Postives = 125/202 (61.88%), Query Frame = 0


Query: 7   CCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIFDLRLKN 66
           CC CC  FI TAG ++LFLWLSLR  KPKCSI+ F+IPAL +  NS  N++L F +R  N
Sbjct: 14  CCTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNSRDNTTLNFMVRCDN 73

Query: 67  QNKEKSVYYDTIYLNLTLLDETR------RLVGNLTVPGFHQGRDKKALRKESFEA--RG 126
            NK+K +YYD ++LN + ++ T+       LVGN TVP F+QG  KKA +    +     
Sbjct: 74  PNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKKKAKKWGQVKPLNNQ 133

Query: 127 VDWKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITL-N 186
              +AV  NGS V RLDL T VR+KI+ WKTKR  + +G +V+VN  GVK    GI +  
Sbjct: 134 TVLRAVLPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGDGVKAQKKGIKMKK 193

Query: 187 SGAAVPVGSL--VRVIWSFWVF 198
           S ++ P+ S   + V+ +  VF
Sbjct: 194 SDSSFPLRSSFPISVLMNLLVF 215

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BLAST of CsaV3_3G023120 vs. TrEMBL
Match: tr|A0A0A0L886|A0A0A0L886_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G418790 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 9.5e-101
Identity = 190/199 (95.48%), Postives = 191/199 (95.98%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF 60
           MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF
Sbjct: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF 60

Query: 61  DLRLKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRKESFEARGVD 120
           DLRLKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRKESFEARGVD
Sbjct: 61  DLRLKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRKESFEARGVD 120

Query: 121 WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGA 180
           WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGA
Sbjct: 121 WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGA 180

Query: 181 AVPVGSLVRVIWSFWVFVL 200
           AVPVGSL     +FW   L
Sbjct: 181 AVPVGSLS----NFWAAFL 195

[Close]

BLAST of CsaV3_3G023120 vs. TrEMBL
Match: tr|A0A1S3BZM3|A0A1S3BZM3_CUCME (protein NDR1-like OS=Cucumis melo OX=3656 GN=LOC103494933 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 1.5e-98
Identity = 181/201 (90.05%), Postives = 190/201 (94.53%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNS-SLI 60
           M ESGWCCKCCFKFIITAGF+ALFLWLSLRTRKPKCSIE FYIPALNQSLNSSSNS +L 
Sbjct: 1   MTESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSSSNSTTLY 60

Query: 61  FDLRLKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRKESFEARGV 120
           FDLRLKNQNK+KSVYYDTIYLN TLLDE RR VGNLTVPGFHQGRDKKALRKES EARGV
Sbjct: 61  FDLRLKNQNKDKSVYYDTIYLNFTLLDEARRPVGNLTVPGFHQGRDKKALRKESVEARGV 120

Query: 121 DWKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSG 180
           DWKAVSRNGST++RLDLATAVRYKILLWKTKRENLRLGTE+KVN QG+KDNPHGITLNSG
Sbjct: 121 DWKAVSRNGSTIVRLDLATAVRYKILLWKTKRENLRLGTEIKVNGQGLKDNPHGITLNSG 180

Query: 181 AAVPVGSLVRVIWSFWVFVLW 201
           AA+P G+LVRVIWSFWVFV W
Sbjct: 181 AAMPGGTLVRVIWSFWVFVWW 201

[Close]

BLAST of CsaV3_3G023120 vs. TrEMBL
Match: tr|A0A2P2MZ88|A0A2P2MZ88_RHIMU (Uncharacterized protein MANES_03G123200 OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 8.2e-44
Identity = 95/187 (50.80%), Postives = 127/187 (67.91%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF 60
           M+++G  C CC +F+IT G +ALF+WLSLRT  PKCS++ FYIPALNQ+LN+  N++L F
Sbjct: 1   MSDNGKSCVCCCQFVITLGLTALFVWLSLRTTGPKCSLQLFYIPALNQTLNAPENTTLFF 60

Query: 61  DLRLKNQNKEKSVYYDTIYLNLTLLDETRR--LVGNLTVPGFHQGRDKKALRKESFEARG 120
            LRL+N N EK VYYD +  N+T  D   R   +GN T+P F+QG  KKA +   F+  G
Sbjct: 61  KLRLQNTNDEKGVYYDPV--NVTFFDSPNRSHSIGNYTIPKFYQGHKKKATKPGQFQTSG 120

Query: 121 VDWKAVSRNGS----TVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGI 180
           +D +AV    S     V R+D+AT+VRYKILLWKTKR  +++G +V VN QG +D   G+
Sbjct: 121 LDRQAVVHEISVKRWAVFRVDMATSVRYKILLWKTKRHTIKVGADVHVNNQGTQDPKKGV 180

Query: 181 TLNSGAA 182
            L S AA
Sbjct: 181 KLKSNAA 185

[Close]

BLAST of CsaV3_3G023120 vs. TrEMBL
Match: tr|A0A2C9W8C5|A0A2C9W8C5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G123200 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 8.2e-44
Identity = 92/173 (53.18%), Postives = 121/173 (69.94%), Query Frame = 0


Query: 4   SGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIFDLR 63
           SG CCKCC  FI T G +ALF+WLSLRT  PKC ++ FYIPALN++LN   N+SL F+LR
Sbjct: 5   SGGCCKCCCSFIFTLGLTALFMWLSLRTSNPKCLLQKFYIPALNKTLNPPKNTSLFFELR 64

Query: 64  LKNQNKEKSVYYDTIYLNLTLLDETRR--LVGNLTVPGFHQGRDKKALRKESFEARGVDW 123
           L+N NK+K VYYD I  N+T  D   +   +GN T+  F+QG  KKA +   F A G+D 
Sbjct: 65  LENTNKDKGVYYDPI--NVTFFDNPNKNHSIGNFTIQKFYQGHKKKATKGGDFNASGLDV 124

Query: 124 KAVSR---NGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNP 172
           +A+SR   NGS + R+D+ATAVRYKI+ WKTKR  + +G +V +N+QG + NP
Sbjct: 125 EAISRAISNGSAIFRVDIATAVRYKIMAWKTKRHRITVGADVNINDQGTQVNP 175

[Close]

BLAST of CsaV3_3G023120 vs. TrEMBL
Match: tr|A0A218XWR7|A0A218XWR7_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr002499 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.4e-43
Identity = 90/182 (49.45%), Postives = 124/182 (68.13%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF 60
           M++SG CCKCC  FI+T G + LF+WL+LR  KP CSI+ FY+PALN+SL+S  N+++  
Sbjct: 1   MSQSGGCCKCCLSFILTVGLTVLFMWLTLRAEKPSCSIKNFYLPALNRSLSSPGNATIFM 60

Query: 61  DLRLKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRKESFEARGVD 120
           DLRLKN NKEK VYYD I + +   ++++  +    VPGF+QG  KKA +K + +  G++
Sbjct: 61  DLRLKNGNKEKGVYYDPINVTVRSFNDSKNSLWQGMVPGFYQGYQKKATKKVTVDTTGLN 120

Query: 121 WKAV-SRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSG 180
           W  V +RN S V R+DL+T VR+KI+ WKTKR  L +   V VNE G K++   I L SG
Sbjct: 121 WTHVAARNDSAVFRVDLSTRVRFKIVFWKTKRHKLAVRANVTVNEFGAKNSKRDIKLKSG 180

Query: 181 AA 182
            A
Sbjct: 181 VA 182

The following BLAST results are available for this feature:

BLAST of CsaV3_3G023120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152027.1	2.6e-110	100.00	PREDICTED: protein NDR1-like [Cucumis sativus]	[more]
KGN57988.1	1.4e-100	95.48	hypothetical protein Csa_3G418790 [Cucumis sativus]	[more]
XP_008454544.1	2.3e-98	90.05	PREDICTED: protein NDR1-like [Cucumis melo]	[more]
XP_022935836.1	5.9e-78	72.95	protein NDR1-like [Cucurbita moschata]	[more]
XP_023535135.1	1.7e-77	74.38	protein NDR1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_3G023120 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G20600.1	5.9e-40	45.54	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G20590.1	8.9e-36	45.95	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G20610.1	1.2e-27	42.19	non-race specific disease resistance protein, putative	[more]
AT4G05220.1	4.6e-08	24.56	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

BLAST of CsaV3_3G023120 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O48915\|NDR1_ARATH	1.1e-38	45.54	Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1	[more]

BLAST of CsaV3_3G023120 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L886\|A0A0A0L886_CUCSA	9.5e-101	95.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G418790 PE=4 SV=1	[more]
tr\|A0A1S3BZM3\|A0A1S3BZM3_CUCME	1.5e-98	90.05	protein NDR1-like OS=Cucumis melo OX=3656 GN=LOC103494933 PE=4 SV=1	[more]
tr\|A0A2P2MZ88\|A0A2P2MZ88_RHIMU	8.2e-44	50.80	Uncharacterized protein MANES_03G123200 OS=Rhizophora mucronata OX=61149 PE=4 SV...	[more]
tr\|A0A2C9W8C5\|A0A2C9W8C5_MANES	8.2e-44	53.18	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G123200 PE=4 SV=...	[more]
tr\|A0A218XWR7\|A0A218XWR7_PUNGR	1.4e-43	49.45	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr002499 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G023120.1	CsaV3_3G023120.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31415	FAMILY NOT NAMED	coord: 4..173
None	No IPR available	PANTHER	PTHR31415:SF22	LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN-RELATED	coord: 4..173

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_3G023120	CSPI03G23340	Wild cucumber (PI 183967)	cpicucB144
CsaV3_3G023120	Cucsa.267030	Cucumber (Gy14) v1	cgycucB410
CsaV3_3G023120	CmaCh09G009290	Cucurbita maxima (Rimu)	cmacucB0022
CsaV3_3G023120	CmoCh09G009260	Cucurbita moschata (Rifu)	cmocucB0010
CsaV3_3G023120	Cp4.1LG06g08970	Cucurbita pepo (Zucchini)	cpecucB0965
CsaV3_3G023120	Carg12798	Silver-seed gourd	carcucB0941
CsaV3_3G023120	Cla004211	Watermelon (97103) v1	cucwmB257
CsaV3_3G023120	MELO3C018104	Melon (DHL92) v3.5.1	cucmeB207
CsaV3_3G023120	ClCG05G014750	Watermelon (Charleston Gray)	cucwcgB242
CsaV3_3G023120	Lsi04G012380	Bottle gourd (USVL1VR-Ls)	cuclsiB213
CsaV3_3G023120	MELO3C018104.2	Melon (DHL92) v3.6.1	cucmedB200
CsaV3_3G023120	Cla97C05G095960	Watermelon (97103) v2	cucwmbB221
CsaV3_3G023120	Bhi09G001634	Wax gourd	cucwgoB353

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_3G023120	Silver-seed gourd	carcucB1059
CsaV3_3G023120	Cucumber (Gy14) v2	cgybcucB117
CsaV3_3G023120	Cucurbita maxima (Rimu)	cmacucB0549
CsaV3_3G023120	Cucurbita moschata (Rifu)	cmocucB0534
CsaV3_3G023120	Cucurbita pepo (Zucchini)	cpecucB0688
CsaV3_3G023120	Bottle gourd (USVL1VR-Ls)	cuclsiB211
CsaV3_3G023120	Watermelon (Charleston Gray)	cucwcgB231
CsaV3_3G023120	Watermelon (97103) v1	cucwmB191
CsaV3_3G023120	Watermelon (97103) v2	cucwmbB213
CsaV3_3G023120	Wax gourd	cucwgoB350