CsaV3_3G022330 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G022330
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionactin-depolymerizing factor
Locationchr3 : 19640620 .. 19645597 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAACGGATGATACAAAGTATGAGGAAGAGAGAGAGAGAGAGAAAAAAAGAGAACGGGAAGAATGAAGGGAGAAAGAACCGTATGGTGTGACACATTGTGTATTTGAATTCATATTGTGTATTTGAATTCATAATGGTAAGTAAAAATAAGGAGAGAAGGAAGAAAAAGTAAAAAATGTAAGAGAACGAACCTCATTCTTACGGTGAAAATTGGACGATAGGTACAAAAATGTGAAGAAAGAGAGGAATATTTCAATTTGGTTGGGAAATTGAGAGGATTGGCTAAGTCACTGGCTCTAACTCCCTTTCTCTTTCTCTTCTTTCTATATCTTCTGTCTTACCCTCCGATTCTTGCCTACCACTTCTGACCTTTCTCTTATTCCATCCTTCTTTCTCTTCTTTTTCCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCATTTTCTCAACTCTTACTCATCCCCTTTCTCACACCCACCTCTTCTCCGATCATCATGTCGTTCCGAGGCCTCCGACGGGTATCTTTCTTTATGTTCTTCCTTTTATCTTTTCTTTACTTTAAACTCAACTGGGTATCACCTTTTTTCAATTGGGGTTTCTGGGTTTTCTTCCAATTTAATCCTAATCATGTTTATCTCAATATTCTTAGCCCCTGCTTCAAGTGAATCCTGCATTTTTCTGTATTTTGTGACCTTAATTTCTTTCTCTCCCCTCTTCTGTGATGGGGTTTAGTTTTGTTTCCTCAAGAATGGTGTTTTTTGTTTTCTTTCCTTTTTTTTCTCTGAGGCATAGTTCAAAAGATTAAAAGAGTACTGTGGATTCAGATGAAAAAAGTTGGACTAGAAAGATCCTGTCTTTGATTTAAGGTTCTTGTTTTAGCTCAGAAAGCTTTGATTTAAAGGGAAGAAGTCATGATCCTTACTGATCAGGTTTTGGTGGTGAAGGGTGGGGTCTAGTAAGTATATGGGTTATGATTTTTTGCCAGTCTGTTGATGGACTTCTGTCTCCTTTGAGTTCTATGATTTTTTAAGGAAAATTTCAACTCAATATTATAAAATTAGAATCTATTGGGGTTCTCAGGATTAATCATGATGTTCTGCTTCTTAGTCAAATTCAACTTTTGGTAACAAGAAGAGAACTCAGTAATTGAATAATGTTATAGATCTATCTCATGGTTTAGTTTTTAAGGGCTTCTTCTGCTGCTCTATTTTGCTGAGGATTCTTACTTTGTTGGCATCATTTCCTTTGAAATCTACTGATTTGGAAATTTCTACTCTTACCGATAATTTTTTATGCTTCTTTCATGGATCTCTGCTTGGTTGTTTGACATTAATGAATTTACCTTTGTAGCAAAACACTTTATCTGCAATGGGTGTGAATGAACACACCAAGAAAACATTTTCTGAACTACAAAGAAAGAAAATGTATCGGTATGTGATCTTTAGGGTTGATGAAAAGAAAAGAGAGGTGGTGGTTGACAAGATTGGCAATCCTGCAGAGAGCTATGAAGATTTCACTGCTGCTCTGCCCGACAATGATTGCCGCTACGCTGTTTATGATTTTGATTTTGTGACATCCGACAATTGTCAGAAGAGCAAGATATTTTTCATAGCATGGTTAGCTTTCACCATCATTATACATCATGAACCTAATCTTATTTTTCTTACTGCTATATTAATGTCTATTGATCTGTATTATTCATTGGGTTGGCCCCATACAAAATTTTGGTCCATACTAAGGTAAACATTAGTTATCCCAAGGTCATAAGGTTTTGATTCTATGATGACTATCATTTCTAAGCTCAGCCTCTAGGTTTTTCATGTTTCTAGTCAATTGCTCATTCATTGAACTGAAAAGCACTCATAAAGTGCTTCTTAGGCTTAGAAATTGGTTAATTTTATTGTGAATATGTGTTGTTGATGCTTTTCTTTGACCTTCCTAAGGATATTTTCGTTATTTTTTGCTCTAGTTTGCCCATTCCAGTCTAAACTTTCTGTTCCTACAAATTTAACAAAGAAATGCATCATATAACAAAATTTAACAGCAAAATCAATTAAATTCTAAGCCTAAGAAAAGACTGTTTTAGTGCTTTTAAGGAACTCATCTGGTGTACTTGCTAATTTCACTAAATACCTTCTTCGGGTGCATATGCTTTACTCTCCACACTGCAGAAGTTGGAGTTTAGTGGTTAGAGCTCTATATGCATCTTCTAATCTCGCTAAAGATCATAGTACATCAAAAGTTTTGGGCAAAACTTGAAGATCTTGTCATATTTTGTCAGAATAATTCTCCTTTTTGTTGATGATCTAGTGCACTCGTCCAATATCTTATTCTGAGAACCATTTAAGTTTTGACCTTGATTAGAAACAACAGGAATAGTTTTAATCATGTCATACCAATGATTATCGTGGGGTATCTTTTCTCTCTTGATCTCACACTACATTGTTGTACTTCAGGTCTCCAGCTAGCTCACGAATCCGTGCTAAGATGCTCTATGCAACATCCAAAGACAACTTTCGGCACGAGCTTGATGGCATCCACTATGAAATTCAAGCTACTGACCCTGCAGAGATGGACCTGGAAGTGATCAGAGACCGTGCTCAATGAACATTCTCTGTTTGTTTAATTTGTTGTTCCCTTGGGGGTAAGCTGCCTTGTATTTTGGTTACTTATGAATTGGTTTATCCCTGCTTCAATATGTGTAAAACCGATCGTTGGAAAATGAAACCATTGCACAAAACCGTAAAATAAACTAACATCTGCAGAATGCTGATATATGGTGGATCG

mRNA sequence

ATGTCGTTCCGAGGCCTCCGACGGCAAAACACTTTATCTGCAATGGGTGTGAATGAACACACCAAGAAAACATTTTCTGAACTACAAAGAAAGAAAATGTATCGGTATGTGATCTTTAGGGTTGATGAAAAGAAAAGAGAGGTGGTGGTTGACAAGATTGGCAATCCTGCAGAGAGCTATGAAGATTTCACTGCTGCTCTGCCCGACAATGATTGCCGCTACGCTGTTTATGATTTTGATTTTGTGACATCCGACAATTGTCAGAAGAGCAAGATATTTTTCATAGCATGGTCTCCAGCTAGCTCACGAATCCGTGCTAAGATGCTCTATGCAACATCCAAAGACAACTTTCGGCACGAGCTTGATGGCATCCACTATGAAATTCAAGCTACTGACCCTGCAGAGATGGACCTGGAAGTGATCAGAGACCGTGCTCAATGA

Coding sequence (CDS)

ATGTCGTTCCGAGGCCTCCGACGGCAAAACACTTTATCTGCAATGGGTGTGAATGAACACACCAAGAAAACATTTTCTGAACTACAAAGAAAGAAAATGTATCGGTATGTGATCTTTAGGGTTGATGAAAAGAAAAGAGAGGTGGTGGTTGACAAGATTGGCAATCCTGCAGAGAGCTATGAAGATTTCACTGCTGCTCTGCCCGACAATGATTGCCGCTACGCTGTTTATGATTTTGATTTTGTGACATCCGACAATTGTCAGAAGAGCAAGATATTTTTCATAGCATGGTCTCCAGCTAGCTCACGAATCCGTGCTAAGATGCTCTATGCAACATCCAAAGACAACTTTCGGCACGAGCTTGATGGCATCCACTATGAAATTCAAGCTACTGACCCTGCAGAGATGGACCTGGAAGTGATCAGAGACCGTGCTCAATGA

Protein sequence

MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIFRVDEKKREVVVDKIGNPAESYEDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEMDLEVIRDRAQ
Homology
[Close]
BLAST of CsaV3_3G022330 vs. NCBI nr
Match: XP_004151983.1 (PREDICTED: actin-depolymerizing factor [Cucumis sativus] >XP_011651442.1 PREDICTED: actin-depolymerizing factor [Cucumis sativus] >KGN57913.1 hypothetical protein Csa_3G389830 [Cucumis sativus])

HSP 1 Score: 295.4 bits (755), Expect = 1.0e-76
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIFRVDEKKREVVVDKIGNPAESY 60
           MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIFRVDEKKREVVVDKIGNPAESY
Sbjct: 1   MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIFRVDEKKREVVVDKIGNPAESY 60

Query: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHE 120
           EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHE
Sbjct: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHE 120

Query: 121 LDGIHYEIQATDPAEMDLEVIRDRAQ 147
           LDGIHYEIQATDPAEMDLEVIRDRAQ
Sbjct: 121 LDGIHYEIQATDPAEMDLEVIRDRAQ 146

[Close]
BLAST of CsaV3_3G022330 vs. NCBI nr
Match: XP_008447430.1 (PREDICTED: actin-depolymerizing factor [Cucumis melo] >XP_008447431.1 PREDICTED: actin-depolymerizing factor [Cucumis melo] >XP_022930980.1 actin-depolymerizing factor-like [Cucurbita moschata] >XP_022995915.1 actin-depolymerizing factor-like [Cucurbita maxima] >XP_023533852.1 actin-depolymerizing factor-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 294.3 bits (752), Expect = 2.3e-76
Identity = 145/146 (99.32%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIFRVDEKKREVVVDKIGNPAESY 60
           MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIF+VDEKKREVVVDKIGNPAESY
Sbjct: 1   MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESY 60

Query: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHE 120
           EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHE
Sbjct: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHE 120

Query: 121 LDGIHYEIQATDPAEMDLEVIRDRAQ 147
           LDGIHYEIQATDPAEMDLEVIRDRAQ
Sbjct: 121 LDGIHYEIQATDPAEMDLEVIRDRAQ 146

[Close]
BLAST of CsaV3_3G022330 vs. NCBI nr
Match: XP_022145996.1 (actin-depolymerizing factor [Momordica charantia])

HSP 1 Score: 288.9 bits (738), Expect = 9.8e-75
Identity = 142/146 (97.26%), Postives = 145/146 (99.32%), Query Frame = 0 

Query: 1   MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIFRVDEKKREVVVDKIGNPAESY 60
           MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIF+VDEKKREVVV+K G+PAESY
Sbjct: 1   MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVEKTGSPAESY 60

Query: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHE 120
           EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHE
Sbjct: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHE 120

Query: 121 LDGIHYEIQATDPAEMDLEVIRDRAQ 147
           LDGIHYEIQATDPAEMDLEVIRDRAQ
Sbjct: 121 LDGIHYEIQATDPAEMDLEVIRDRAQ 146

[Close]
BLAST of CsaV3_3G022330 vs. NCBI nr
Match: XP_022963942.1 (actin-depolymerizing factor-like [Cucurbita moschata] >XP_022967676.1 actin-depolymerizing factor-like [Cucurbita maxima] >XP_023553738.1 actin-depolymerizing factor-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 283.9 bits (725), Expect = 3.2e-73
Identity = 139/146 (95.21%), Postives = 145/146 (99.32%), Query Frame = 0 

Query: 1   MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIFRVDEKKREVVVDKIGNPAESY 60
           MSFRGLRRQNTLSAMGVNEHTKK FSELQRKKMYRYVIF+VDEKKREVVVDKIG+PAESY
Sbjct: 1   MSFRGLRRQNTLSAMGVNEHTKKIFSELQRKKMYRYVIFKVDEKKREVVVDKIGSPAESY 60

Query: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHE 120
           EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKD+FRH+
Sbjct: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDSFRHD 120

Query: 121 LDGIHYEIQATDPAEMDLEVIRDRAQ 147
           L+GIHYEIQATDPAEMDL+VIRDRAQ
Sbjct: 121 LNGIHYEIQATDPAEMDLDVIRDRAQ 146

[Close]
BLAST of CsaV3_3G022330 vs. NCBI nr
Match: XP_008235687.1 (PREDICTED: actin-depolymerizing factor [Prunus mume])

HSP 1 Score: 248.4 bits (633), Expect = 1.5e-62
Identity = 120/145 (82.76%), Postives = 134/145 (92.41%), Query Frame = 0 

Query: 1   MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIFRVDEKKREVVVDKIGNPAESY 60
           MSFRGL R N   AMGV++ +KKTF ELQRKK++RYVIF+VDEKKREVVV+KIG PAESY
Sbjct: 1   MSFRGLSRPNASCAMGVSDDSKKTFMELQRKKVHRYVIFKVDEKKREVVVEKIGGPAESY 60

Query: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHE 120
           +DF AALP+NDCRYAVYDFDFVTS+NCQKSKIFFIAWSP++SRIRAKMLYATSKD FR E
Sbjct: 61  DDFVAALPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRE 120

Query: 121 LDGIHYEIQATDPAEMDLEVIRDRA 146
           LDGIHYEIQATDP+EMDLEV+RDRA
Sbjct: 121 LDGIHYEIQATDPSEMDLEVLRDRA 145

[Close]
BLAST of CsaV3_3G022330 vs. TAIR10
Match: AT2G31200.1 (actin depolymerizing factor 6)

HSP 1 Score: 223.8 bits (569), Expect = 7.0e-59
Identity = 105/145 (72.41%), Postives = 124/145 (85.52%), Query Frame = 0 

Query: 1   MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIFRVDEKKREVVVDKIGNPAESY 60
           MSFRGL R N +S MGV + +K TF ELQRKK +RYV+F++DE K+EVVV+K GNP ESY
Sbjct: 1   MSFRGLSRPNAISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESY 60

Query: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHE 120
           +DF A+LPDNDCRYAVYDFDFVTS+NCQKSKIFF AWSP++S IRAK+LY+TSKD    E
Sbjct: 61  DDFLASLPDNDCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRE 120

Query: 121 LDGIHYEIQATDPAEMDLEVIRDRA 146
           L GIHYEIQATDP E+DLEV+R+RA
Sbjct: 121 LQGIHYEIQATDPTEVDLEVLRERA 145

[Close]
BLAST of CsaV3_3G022330 vs. TAIR10
Match: AT4G00680.1 (actin depolymerizing factor 8)

HSP 1 Score: 186.4 bits (472), Expect = 1.2e-47
Identity = 80/135 (59.26%), Postives = 113/135 (83.70%), Query Frame = 0 

Query: 10  NTLSAMGVNEHTKKTFSELQRKKMYRYVIFRVDEKKREVVVDKIGNPAESYEDFTAALPD 69
           N+ S M VN+  K  F EL+ K+ YR+++F++DEK ++V ++K+GNP E+Y+DFT+++PD
Sbjct: 3   NSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPD 62

Query: 70  NDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHELDGIHYEIQ 129
           ++CRYAVYDFDF T DNCQKSKIFFIAWSP +SR+R+KMLYA+SKD F+ E++GI  E+Q
Sbjct: 63  DECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVELQ 122

Query: 130 ATDPAEMDLEVIRDR 145
           ATDP+EM L++I+ R
Sbjct: 123 ATDPSEMSLDIIKGR 137

[Close]
BLAST of CsaV3_3G022330 vs. TAIR10
Match: AT1G01750.1 (actin depolymerizing factor 11)

HSP 1 Score: 185.3 bits (469), Expect = 2.8e-47
Identity = 80/135 (59.26%), Postives = 113/135 (83.70%), Query Frame = 0 

Query: 10  NTLSAMGVNEHTKKTFSELQRKKMYRYVIFRVDEKKREVVVDKIGNPAESYEDFTAALPD 69
           N+ S M V++  K  F EL+ K+ YR+++F++DEK ++V++DK+GNP E+YEDFT ++P+
Sbjct: 3   NSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIPE 62

Query: 70  NDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHELDGIHYEIQ 129
           ++CRYAVYD+DF T +NCQKSKIFFIAWSP +SR+R+KMLYA+SKD F+ ELDGI  E+Q
Sbjct: 63  DECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVELQ 122

Query: 130 ATDPAEMDLEVIRDR 145
           ATDP+EM L++I+ R
Sbjct: 123 ATDPSEMSLDIIKGR 137

[Close]
BLAST of CsaV3_3G022330 vs. TAIR10
Match: AT4G25590.1 (actin depolymerizing factor 7)

HSP 1 Score: 180.3 bits (456), Expect = 8.9e-46
Identity = 83/136 (61.03%), Postives = 109/136 (80.15%), Query Frame = 0 

Query: 10  NTLSAMGVNEHTKKTFSELQRKKMYRYVIFRVDEKKREVVVDKIGNPAESYEDFTAALPD 69
           N  S M V +  K  F EL+ K+ YR++IFR+D   ++VVV+K+GNP E+Y+DFTA+LP 
Sbjct: 3   NAASGMAVEDECKLKFLELKSKRNYRFIIFRID--GQQVVVEKLGNPDETYDDFTASLPA 62

Query: 70  NDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHELDGIHYEIQ 129
           N+CRYAV+DFDF+T +NCQKSKIFFIAWSP SSR+R KM+YA+SKD F+ ELDGI  E+Q
Sbjct: 63  NECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQ 122

Query: 130 ATDPAEMDLEVIRDRA 146
           ATDP+EM  ++I+ RA
Sbjct: 123 ATDPSEMSFDIIKSRA 136

[Close]
BLAST of CsaV3_3G022330 vs. TAIR10
Match: AT3G46010.2 (actin depolymerizing factor 1)

HSP 1 Score: 177.9 bits (450), Expect = 4.4e-45
Identity = 77/139 (55.40%), Postives = 111/139 (79.86%), Query Frame = 0 

Query: 7   RRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIFRVDEKKREVVVDKIGNPAESYEDFTAA 66
           R  N  S M V++  K  F EL+ K+ +R+++++++EK+++VVV+K+G P ++YE+F A 
Sbjct: 11  RSANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAAC 70

Query: 67  LPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHELDGIHY 126
           LP ++CRYA+YDFDFVT++NCQKSKIFFIAW P  +++R+KM+YA+SKD F+ ELDGI  
Sbjct: 71  LPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQV 130

Query: 127 EIQATDPAEMDLEVIRDRA 146
           E+QATDP EMDL+V R RA
Sbjct: 131 ELQATDPTEMDLDVFRSRA 149

[Close]
BLAST of CsaV3_3G022330 vs. Swiss-Prot
Match: sp|Q8SAG3|ADF_VITVI (Actin-depolymerizing factor OS=Vitis vinifera OX=29760 PE=2 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 7.9e-60
Identity = 111/145 (76.55%), Postives = 129/145 (88.97%), Query Frame = 0 

Query: 1   MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIFRVDEKKREVVVDKIGNPAESY 60
           MSFRGL   N  S MGV +H+K TF EL+RKK++RYVIF++DEKK+EVVV+K G PAES+
Sbjct: 1   MSFRGL---NASSGMGVADHSKNTFLELKRKKVHRYVIFKIDEKKKEVVVEKTGGPAESF 60

Query: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHE 120
           ++F AALP+NDCRYAVYDFDFVTS+NCQKSKIFFIAWSP SSRIRAKMLYATSK+ FR E
Sbjct: 61  DEFAAALPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPDSSRIRAKMLYATSKERFRRE 120

Query: 121 LDGIHYEIQATDPAEMDLEVIRDRA 146
           LDG+HYEIQATDP EMDLEV+R+RA
Sbjct: 121 LDGVHYEIQATDPTEMDLEVLRERA 142

[Close]
BLAST of CsaV3_3G022330 vs. Swiss-Prot
Match: sp|Q9ZSK2|ADF6_ARATH (Actin-depolymerizing factor 6 OS=Arabidopsis thaliana OX=3702 GN=ADF6 PE=1 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.3e-57
Identity = 105/145 (72.41%), Postives = 124/145 (85.52%), Query Frame = 0 

Query: 1   MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIFRVDEKKREVVVDKIGNPAESY 60
           MSFRGL R N +S MGV + +K TF ELQRKK +RYV+F++DE K+EVVV+K GNP ESY
Sbjct: 1   MSFRGLSRPNAISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESY 60

Query: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHE 120
           +DF A+LPDNDCRYAVYDFDFVTS+NCQKSKIFF AWSP++S IRAK+LY+TSKD    E
Sbjct: 61  DDFLASLPDNDCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRE 120

Query: 121 LDGIHYEIQATDPAEMDLEVIRDRA 146
           L GIHYEIQATDP E+DLEV+R+RA
Sbjct: 121 LQGIHYEIQATDPTEVDLEVLRERA 145

[Close]
BLAST of CsaV3_3G022330 vs. Swiss-Prot
Match: sp|Q2QLT8|ADF11_ORYSJ (Actin-depolymerizing factor 11 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF11 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 5.2e-51
Identity = 92/138 (66.67%), Postives = 118/138 (85.51%), Query Frame = 0 

Query: 8   RQNTLSAMGVNEHTKKTFSELQRKKMYRYVIFRVDEKKREVVVDKIGNPAESYEDFTAAL 67
           R N  S +GV    K+TF ELQRKK +RYVIF++D+K +EVVV+K G+  ES++DF  +L
Sbjct: 7   RANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSL 66

Query: 68  PDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHELDGIHYE 127
           P++DCRYA+YDFDFVT +NCQKSKIFF+AWSP+ SRIRAKMLYATSK+ FR ELDG+HYE
Sbjct: 67  PESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYE 126

Query: 128 IQATDPAEMDLEVIRDRA 146
           IQATDP+E+D+E++R+RA
Sbjct: 127 IQATDPSELDIELLRERA 144

[Close]
BLAST of CsaV3_3G022330 vs. Swiss-Prot
Match: sp|Q9AY76|ADF2_ORYSJ (Actin-depolymerizing factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF2 PE=2 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.2e-49
Identity = 92/136 (67.65%), Postives = 113/136 (83.09%), Query Frame = 0 

Query: 10  NTLSAMGVNEHTKKTFSELQRKKMYRYVIFRVDEKKREVVVDKIGNPAESYEDFTAALPD 69
           N  S MGV    + TF ELQ KK +RYVIF+++EK+++VVV+K G   ESY+DF A+LP+
Sbjct: 9   NASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLPE 68

Query: 70  NDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHELDGIHYEIQ 129
           NDCRYA+YDFDFVT +N QKSKIFFIAWSP++SRIRAKMLY+TSKD  + ELDG HYEIQ
Sbjct: 69  NDCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFHYEIQ 128

Query: 130 ATDPAEMDLEVIRDRA 146
           ATDP E+DLEV+R+RA
Sbjct: 129 ATDPTEVDLEVLRERA 144

[Close]
BLAST of CsaV3_3G022330 vs. Swiss-Prot
Match: sp|Q337A5|ADF10_ORYSJ (Actin-depolymerizing factor 10 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF10 PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 3.5e-47
Identity = 85/129 (65.89%), Postives = 111/129 (86.05%), Query Frame = 0 

Query: 17  VNEHTKKTFSELQRKKMYRYVIFRVDEKKREVVVDKIGNPAESYEDFTAALPDNDCRYAV 76
           V E +K  F EL+R+K++RYVIF++D+++ E+VV+K G P ESY+DFTA+LP +DCRYAV
Sbjct: 20  VPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLPADDCRYAV 79

Query: 77  YDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHELDGIHYEIQATDPAEM 136
           YD DFV+ DNC+KSKIFFI+WSP+ SRIRAK +YA S++ FRHELDG+H+EIQATDP +M
Sbjct: 80  YDLDFVSDDNCRKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHELDGVHFEIQATDPDDM 139

Query: 137 DLEVIRDRA 146
           DLEV+R RA
Sbjct: 140 DLEVLRGRA 148

[Close]
BLAST of CsaV3_3G022330 vs. TrEMBL
Match: tr|A0A0A0L7Z2|A0A0A0L7Z2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G389830 PE=3 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 6.9e-77
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIFRVDEKKREVVVDKIGNPAESY 60
           MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIFRVDEKKREVVVDKIGNPAESY
Sbjct: 1   MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIFRVDEKKREVVVDKIGNPAESY 60

Query: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHE 120
           EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHE
Sbjct: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHE 120

Query: 121 LDGIHYEIQATDPAEMDLEVIRDRAQ 147
           LDGIHYEIQATDPAEMDLEVIRDRAQ
Sbjct: 121 LDGIHYEIQATDPAEMDLEVIRDRAQ 146

[Close]
BLAST of CsaV3_3G022330 vs. TrEMBL
Match: tr|A0A1S3BHG1|A0A1S3BHG1_CUCME (actin-depolymerizing factor OS=Cucumis melo OX=3656 GN=LOC103489879 PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.5e-76
Identity = 145/146 (99.32%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIFRVDEKKREVVVDKIGNPAESY 60
           MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIF+VDEKKREVVVDKIGNPAESY
Sbjct: 1   MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIFKVDEKKREVVVDKIGNPAESY 60

Query: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHE 120
           EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHE
Sbjct: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHE 120

Query: 121 LDGIHYEIQATDPAEMDLEVIRDRAQ 147
           LDGIHYEIQATDPAEMDLEVIRDRAQ
Sbjct: 121 LDGIHYEIQATDPAEMDLEVIRDRAQ 146

[Close]
BLAST of CsaV3_3G022330 vs. TrEMBL
Match: tr|M5VQ33|M5VQ33_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G224300 PE=3 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 3.7e-62
Identity = 119/145 (82.07%), Postives = 133/145 (91.72%), Query Frame = 0 

Query: 1   MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIFRVDEKKREVVVDKIGNPAESY 60
           MSFRGL R N   AMGV++ +K TF ELQRKK++RYVIF+VDEKKREVVV+KIG PAESY
Sbjct: 1   MSFRGLSRPNASCAMGVSDDSKNTFMELQRKKVHRYVIFKVDEKKREVVVEKIGGPAESY 60

Query: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHE 120
           +DF AALP+NDCRYAVYDFDFVTS+NCQKSKIFFIAWSP++SRIRAKMLYATSKD FR E
Sbjct: 61  DDFAAALPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRE 120

Query: 121 LDGIHYEIQATDPAEMDLEVIRDRA 146
           LDGIHYEIQATDP+EMDLEV+RDRA
Sbjct: 121 LDGIHYEIQATDPSEMDLEVLRDRA 145

[Close]
BLAST of CsaV3_3G022330 vs. TrEMBL
Match: tr|A0A2P6PVC4|A0A2P6PVC4_ROSCH (Putative ADF/Cofilin, ADF-H/Gelsolin-like domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0288181 PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 8.2e-62
Identity = 119/145 (82.07%), Postives = 130/145 (89.66%), Query Frame = 0 

Query: 1   MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIFRVDEKKREVVVDKIGNPAESY 60
           MSFRGL R N   AM   EH+K TF ELQRKK++RYVIFRVDEKK+EVVV+KIG PAESY
Sbjct: 1   MSFRGLSRPNASCAMAAAEHSKNTFMELQRKKVHRYVIFRVDEKKKEVVVEKIGGPAESY 60

Query: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHE 120
           +DF AALP+NDCRYAVYDFDFVTSDNCQKSKIFFIAWSP++SRIRAKMLYATSKD FR E
Sbjct: 61  DDFVAALPENDCRYAVYDFDFVTSDNCQKSKIFFIAWSPSTSRIRAKMLYATSKDQFRRE 120

Query: 121 LDGIHYEIQATDPAEMDLEVIRDRA 146
           LDGIHYEIQATDP EMDLEVI++RA
Sbjct: 121 LDGIHYEIQATDPTEMDLEVIKERA 145

[Close]
BLAST of CsaV3_3G022330 vs. TrEMBL
Match: tr|A0A061DNR6|A0A061DNR6_THECC (Actin depolymerizing factor 6 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_004049 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 2.4e-61
Identity = 117/145 (80.69%), Postives = 130/145 (89.66%), Query Frame = 0 

Query: 1   MSFRGLRRQNTLSAMGVNEHTKKTFSELQRKKMYRYVIFRVDEKKREVVVDKIGNPAESY 60
           MSFRGL R N  S MGV +H+K TF EL+RKK+YRYVIF++DEKKREVVV+K G P ESY
Sbjct: 1   MSFRGLSRPNATSGMGVADHSKDTFLELKRKKVYRYVIFKIDEKKREVVVEKTGGPVESY 60

Query: 61  EDFTAALPDNDCRYAVYDFDFVTSDNCQKSKIFFIAWSPASSRIRAKMLYATSKDNFRHE 120
           +DFTA+LP+NDCRYAVYDFDFVTS+NCQKSKIFFIAWSP+SSRIRAKMLYATSKD FR E
Sbjct: 61  DDFTASLPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPSSSRIRAKMLYATSKDRFRRE 120

Query: 121 LDGIHYEIQATDPAEMDLEVIRDRA 146
           LDGIHYEIQATD  EMDLEV+RDRA
Sbjct: 121 LDGIHYEIQATDATEMDLEVLRDRA 145

The following BLAST results are available for this feature:
BLAST of CsaV3_3G022330 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004151983.11.0e-76100.00PREDICTED: actin-depolymerizing factor [Cucumis sativus] >XP_011651442.1 PREDICT... [more]
XP_008447430.12.3e-7699.32PREDICTED: actin-depolymerizing factor [Cucumis melo] >XP_008447431.1 PREDICTED:... [more]
XP_022145996.19.8e-7597.26actin-depolymerizing factor [Momordica charantia][more]
XP_022963942.13.2e-7395.21actin-depolymerizing factor-like [Cucurbita moschata] >XP_022967676.1 actin-depo... [more]
XP_008235687.11.5e-6282.76PREDICTED: actin-depolymerizing factor [Prunus mume][more]
BLAST of CsaV3_3G022330 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G31200.17.0e-5972.41actin depolymerizing factor 6[more]
AT4G00680.11.2e-4759.26actin depolymerizing factor 8[more]
AT1G01750.12.8e-4759.26actin depolymerizing factor 11[more]
AT4G25590.18.9e-4661.03actin depolymerizing factor 7[more]
AT3G46010.24.4e-4555.40actin depolymerizing factor 1[more]
BLAST of CsaV3_3G022330 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8SAG3|ADF_VITVI7.9e-6076.55Actin-depolymerizing factor OS=Vitis vinifera OX=29760 PE=2 SV=1[more]
sp|Q9ZSK2|ADF6_ARATH1.3e-5772.41Actin-depolymerizing factor 6 OS=Arabidopsis thaliana OX=3702 GN=ADF6 PE=1 SV=1[more]
sp|Q2QLT8|ADF11_ORYSJ5.2e-5166.67Actin-depolymerizing factor 11 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF11... [more]
sp|Q9AY76|ADF2_ORYSJ2.2e-4967.65Actin-depolymerizing factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF2 P... [more]
sp|Q337A5|ADF10_ORYSJ3.5e-4765.89Actin-depolymerizing factor 10 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF10... [more]
BLAST of CsaV3_3G022330 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L7Z2|A0A0A0L7Z2_CUCSA6.9e-77100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G389830 PE=3 SV=1[more]
tr|A0A1S3BHG1|A0A1S3BHG1_CUCME1.5e-7699.32actin-depolymerizing factor OS=Cucumis melo OX=3656 GN=LOC103489879 PE=3 SV=1[more]
tr|M5VQ33|M5VQ33_PRUPE3.7e-6282.07Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G224300 PE=3 SV=1[more]
tr|A0A2P6PVC4|A0A2P6PVC4_ROSCH8.2e-6282.07Putative ADF/Cofilin, ADF-H/Gelsolin-like domain-containing protein OS=Rosa chin... [more]
tr|A0A061DNR6|A0A061DNR6_THECC2.4e-6180.69Actin depolymerizing factor 6 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_004049... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0015629actin cytoskeleton
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0030042actin filament depolymerization
Vocabulary: Molecular Function
TermDefinition
GO:0003779actin binding
Vocabulary: INTERPRO
TermDefinition
IPR017904ADF/Cofilin
IPR029006ADF-H/Gelsolin-like_dom_sf
IPR002108ADF-H
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030042 actin filament depolymerization
cellular_component GO:0015629 actin cytoskeleton
cellular_component GO:0005622 intracellular
molecular_function GO:0003779 actin binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G022330.1CsaV3_3G022330.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002108Actin-depolymerising factor homology domainSMARTSM00102adf_2coord: 19..146
e-value: 2.9E-52
score: 189.6
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 22..143
e-value: 4.8E-36
score: 123.6
IPR002108Actin-depolymerising factor homology domainPROSITEPS51263ADF_Hcoord: 13..146
score: 38.876
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3DG3DSA:3.40.20.10coord: 9..146
e-value: 2.2E-47
score: 162.0
NoneNo IPR availablePANTHERPTHR11913:SF20ACTIN-DEPOLYMERIZING FACTOR 6coord: 1..146
NoneNo IPR availableSUPERFAMILYSSF55753Actin depolymerizing proteinscoord: 10..144
IPR017904ADF/CofilinPANTHERPTHR11913COFILIN-RELATEDcoord: 1..146
IPR017904ADF/CofilinCDDcd11286ADF_cofilin_likecoord: 13..145
e-value: 1.33985E-59
score: 182.371

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G022330CSPI03G22580Wild cucumber (PI 183967)cpicucB144
CsaV3_3G022330Cucsa.053580Cucumber (Gy14) v1cgycucB039
CsaV3_3G022330CmaCh19G000870Cucurbita maxima (Rimu)cmacucB0621
CsaV3_3G022330CmaCh02G017500Cucurbita maxima (Rimu)cmacucB0710
CsaV3_3G022330CmoCh19G001000Cucurbita moschata (Rifu)cmocucB0604
CsaV3_3G022330CmoCh02G017910Cucurbita moschata (Rifu)cmocucB0696
CsaV3_3G022330Cp4.1LG15g00760Cucurbita pepo (Zucchini)cpecucB0304
CsaV3_3G022330Cp4.1LG05g01070Cucurbita pepo (Zucchini)cpecucB0902
CsaV3_3G022330CsGy3G021640Cucumber (Gy14) v2cgybcucB117
CsaV3_3G022330Carg16876Silver-seed gourdcarcucB0789
CsaV3_3G022330Carg08967Silver-seed gourdcarcucB0816
CsaV3_3G022330Cla005983Watermelon (97103) v1cucwmB228
CsaV3_3G022330MELO3C012894Melon (DHL92) v3.5.1cucmeB209
CsaV3_3G022330ClCG07G001020Watermelon (Charleston Gray)cucwcgB265
CsaV3_3G022330Lsi05G010150Bottle gourd (USVL1VR-Ls)cuclsiB236
CsaV3_3G022330Lsi05G017310Bottle gourd (USVL1VR-Ls)cuclsiB243
CsaV3_3G022330MELO3C012894.2Melon (DHL92) v3.6.1cucmedB203
CsaV3_3G022330Cla97C07G129300Watermelon (97103) v2cucwmbB245
CsaV3_3G022330Bhi05G000156Wax gourdcucwgoB309
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G022330Cucumber (Chinese Long) v3cuccucB073
CsaV3_3G022330Cucumber (Chinese Long) v3cuccucB110
CsaV3_3G022330Cucumber (Gy14) v2cgybcucB122
CsaV3_3G022330Cucumber (Gy14) v1cgycucB389
CsaV3_3G022330Cucurbita maxima (Rimu)cmacucB1054
CsaV3_3G022330Wild cucumber (PI 183967)cpicucB152
CsaV3_3G022330Bottle gourd (USVL1VR-Ls)cuclsiB168
CsaV3_3G022330Melon (DHL92) v3.5.1cucmeB245
CsaV3_3G022330Melon (DHL92) v3.6.1cucmedB245
CsaV3_3G022330Watermelon (97103) v1cucwmB251
CsaV3_3G022330Watermelon (97103) v1cucwmB292
CsaV3_3G022330Watermelon (97103) v2cucwmbB215
CsaV3_3G022330Watermelon (97103) v2cucwmbB236
CsaV3_3G022330Wax gourdcucwgoB286