CsaV3_3G022140 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G022140
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionH/ACA ribonucleoprotein complex subunit 3-like protein
Locationchr3 : 19294242 .. 19310699 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CATAAATTCAATTTTAAGAAACCACCCGGTTTGGTCAGCTAACAGGATTAGTAACTAAATTTTCGGTTTAACTATACTGAACCGGTTTAGTATATATACAATTCTAGGTTTTCATTCTTCATTTCAACAGCCGCCCTTCGTCCCTACCTCCCGTTCATTGGCGCGCCCCCGGTCGTTCGTTCTTGGTCTCGCCGCCGTTCGCCTTTTGTTGCACCTCTGTTCATTTCGTCAGTCACTGGTTCCTCACCTTTTCTCTAATCTAATTTGTATAATCAATATCAATAACCCCCCTCCTCCCCCTTTTTTTTACAGGTTGGGTGCCTATCGACGATGTATCTTCAGTTTTACATAAACGAAAATGGTGATAAAGTCTACACCACAAAGGTTTTTATTTCTTGTTTCTTCTTTTGCTCTTTGTGTTGAAGTTAATGGATATCATATCGTTTAGTATTGGGGTTGTACTATTTTTGACAGCGTCTGCTGCGTATCAGATAAGCAGTGTTATATGGGGTCCTTGATTTTTAAGATAGTTAAAGATTGCCGAGTTAATGATCATAAGTTTTGGAGACTGGACTAGTTCTATTTGTGCTGACCTTCCTTAGAAAATTAGCCTACCGTTATTAAGTGCAAGTAATCTGTGTAGTTGCAATTAATTTATGTACCCATGAAATGATTGATTAAATCTATAGGATACCTTTGCTTAGAGTGTCTCAATTTTACAGTAAGTTTCTGTTAAGGCTTTGAGCTTTGTTCCAATAACTTCTAATCCTCCCGTCTTTACTTTACCATATCACGATAGTAGTTTAGAATTCCCTTCGCCCGTTCCTTGACCAAGAAGAAGGAGTTTTAGATTTTAGGCTTTCGATGCCATTCTTTCTCTGCTAATTTGATTGGTAAGTTTCACATTTACCAAGGATGCTCTTTCATTATCACCTGCCATTTCTTGGGAAAAATGTAACAACCTGTCAATTCGAATGTTTTATTGAATGTCATGGAAGTGATTATAACTTAAGGTCAAGGATTCAATCCATTATGGCCGCTCCTAGGAATTTCCTATGAGTTTATTTGACACCAAAATATTGAAGGGTCAGGTGGGTTGCCCCTTAAATTTGTCTGTGTGTGTGTAAGATGACCCGAAAACTCACGGATATAAAAAAAACTGGAAACCAAAGGTAACTAATTTTTACTTGATCGAATAATAAGGCTTAAAATTCAAAGCCAAGTCCATCACCAAAATGTAAAGGACTAGGCAGTGGTATGAATTAACCCAAATACTAAGCACAGAAGCTTAATCTAAAGTAAAAGCTACTTTAATGAAAACTAAAATCATACAATTATGAACCAGCAGATCTTCTTGAATCCCCCCAGAAGACACCAATCCATTAGTCACTGCAAGAACTATTGCTTGCACTTCCATTTGATAAAATTTTATAAATAAAGATGAGTACAAAAATACTAATGTGTAATTTCCTAGCGATTTATAACTTGGACTGTAACCTAAAACTTTCTCTAGACAGTTAGTCTTATTACGTAAACCAGATCCTTGCGTTGATAACCTGGACAGAAACCTCCTCATAGTTCAAATCTTCTTTCACTTGCAATGGTGTATGGCTTAACTTGGGAGACATTTGCAATATACTTCCGAAGTATGGAGGTACGGAAAGTATTATGGATTGAATCTAAGACAGGCAGTAAGGCTAAGCGATATGCCAGTATACCCACCTATTCCAAATTCTCAAAAGTTCCAAAAAGTCTTAGGCTGAGCTTCCCTTTCTTCCCAAAGCTCAAGATTCCTTTCAACGACAAGACTATACCATATATTCAACTTTTAAAATTTAGTTATTTTCTTCTGACTGCTGACTTTAAGCTGTCTTCCTTTTCTACTTAACTGAGTCAAGACCTCATTAGATATTTGCACTGACTCAGGTCCCAAAATCGAGCTCTCTCCCACTTCAGTCTAATTGGTTGGTGACCTACGCTTATCCGTAGGGTGCAATGAAAGGGGCCATTCCGATAGTTGCTTGATAGATATTATTATAACTAAATCGTGTTAGATGGAAAATGTTTGTCCCAGCTGCCCTGGAAGTCCAAAACTTAAACTTGAAGCATATCGTACACTATTTGAACTGTCCTTTCTGACTGACCCATCTGCGGGTGGAACAAGATACTAAACCGTATTAGATGGAAAATGTTTCTCCCAGCTGCCCTGGAAGTCCAAAGCTTAAACTTGAAGCATATCCTACACTATTTGAACTGTCCTTTCTGACTGACCCATCTGCGGGTGGAACAAGATACTGAAATCAAGTCTTGTGTCTAGAGCCTTTTCCATACTTTTCCAAAGTTTGGAAGTGAACTTTGGATCTTGTTCTGACAGTATAGTCTATCAATCTTGTTCTGACACCTTGGATCTTGTTTAGACCAAGTGTCTATAAAATACAACTAAAATAGGTCCTGCACATACGTCTTCACTTGCTTGATAAACTGAGTATCAAAAACAAAACAAAAGAGAAAAACTAGCTTGATAAGCCATTGCTAATTGCCCTTAACTGCTTGTAACTTCTTTTGTGCAGACAATTTTATGCTAACTTGTCTGTTTCGTATTTGTCCTTACCTTGTACAGAAGGAATCTCCTCTAGGTTTGGCCACGCAATCTGCTCATCCAGGTAATTTTTTTTTTTGCATTATTTGGCTAGTTGTGCCCCACTTCCTTTCACTGACTTGCATAATTAGCAATATCAATGTTCCTGTTAGGGAGAAAGACCATGTTCTAATGTCGTTTTTTCTTATAACAAGGGAATTGGTTGAACATTATACATGGTCTATTTCAGTTGTAATTTTCACTGTGGCTGAGGCTATTGTGAAGATTGGAATTATACATTCGTGAGAATGGAAATGCACCGTTGATATACAACATTTATCATTGTAGAAGAGGATAATATCATTGGTCACTTATCTCTTTAGAGATACCATCGTTTGTTCTCTATCTATATTAATTGAATTAATAAAGATATTGCCTGATAGGCTGCCTCTTCAATGTGGTCATGGTTTTAGCAGTTTTGGGGATTTCTGTTAACCTGTTTTACATTTTCTGACTGCAGCTCGTTTCTCCCCTGATGACAAATATTCGAGGCAAAGAGTTCTTCTTAAGAAGCGATTTGGCTTGCTTCCTACACAGCAGCCACCTCCAAAGTACTGAACTCAACGCACTCTCAAATCACAACTCTATGGCAGTTCTCAAGTGTTTGTTTCCCAAACCCCCATCAATAGTTAGATCGTGACTTGGTTAAACTTTGATAGATAGTTTGCCTTTTCTTTCTATGGCTTGTAATTGAGCTGTAAAGCACAATTCACTGTTGAACCTTTCTTTAAGCTTGTCAGTGGCTTTATGTTTGTATTAAACTTTATTTTACTGAAAGCAAACTTTTATGTACTTTGAAGATCTGGTTTTAGTGCAAGATAATGTGCCTTTTTTCATACTTTTCTCCTCCTTTTGTACAAACATTGCAGTTGTCAAGCACCAATGTCTGCTGATCCTTTCTAAAGTTGTTGGCATTGTTTATGTATTTAACCTGATTCATTGACAATTAATTGAGTCTAAGCCATAAGGTGGTAGTCTCCAATTTCCTTGGTTTTGACATTCAAGTTCCATCGACGTTTGTGATTCAAGACGCATATGCACCGGAATTCATCTCTAGACTATGAAGGTATGCAAGGTTCATTTTATGATCCATTGATTTGAAGAACTATAATATTTTAGAGATGATCATGTGCTTCTCTTGGCCTGGGAATATGGTTTTTGTTCCAGGGTATTTGAATTTGAACATTGAAAAAGTATGTTCAAATGGGTTATAGGAGCTAGGAGTTTGGGCCTAAGTTTGCCATATTGCTTGCAAAAATATAGCTGAACGGTTAGGTGCTTGACTCTTCTGCCCCACTTAAGGAATAATTAACTGGATGCAGATATAAAATTAGCTTATGAAACAGATATATCATCATCAACTATTTTGATGGTTTTGGTCTCTAAAGTACCATTTAGAGTTACAAGTTATACTTGGTGAATTGAGTTTCAAACTTTTAACCTTAGTTGAATTTATAACTTAATTCGTTAGTTGAATGTATAACTTAATTAATTTCTTAAGCTATGCTTAAGTTAGCATGATTGAGATGTGTCTTAAATAGATAAACAAAAGTTAAAATTTTCAATCAAAATATAAAGCAGGCTAAAGTTGGAGAACAAAGGTATATTGTCACATGCGATAAACCGTGTTTGTCGAATTATTGTCTTCTAAACAAAACTTTGTCAAATTATGGTGGGTTCGTCTGTCAAATAAAATGATTTTTGAAAAAGGAAATGTAGAAAAAGGAAAATAGAATACGAAATGAATCTTCCTTGAAACGATTGATGGAAGTATTATATCTTTGTTATAGACATTGTTTTTAGAAAAGGAGGAAGAACATGGCATCCATTGAAGAAGACCAGAACTCTGTAGCCCTTTTCTTCAATCACAAAAGCACACTCTAACATGATCATACTTCTTTAATTTCCTAAAGATATGATTTGATATACACGAGTCCAAATCACCTAGAGTTTTTGTTTTCCCAAAAAGTAATTTAATTAACATAATTTTCTTTTCTTGTTCTTTTAATTACAATTCAAAAGGTACTTTAGAAAAACAATTATGAAACAAATGTGGTTAGGATTAAAAAAGAAAAAGAAAAGAAAAGAAAAAGAAAAAGAAAAAGAAAAGAAAAAGAAAAAGTGATTTAGAAAAGGAGCCAATTGAAGCACCATATAGAAACTTTAATTTATGTTATTTTTAGGTTCATATATGTGAACATGCTCTATTTTAAACTAAACATACAATATAGTTTTTCTAAAAAAAATGTACAGTCTAAAACAGCACTTTATTATTTTGTCAAAAACTATGTGCTGAAAATATCTTAATAATCACTCTATTTCCCAATTAAACCTAAACAAAAAGAAAATAATGCGAAATTAAAGCTTCCACTATTCAGACATAGGTGTCACTTTTGAGCCTATCCCTTTATATATTATGTTAATTTGATCCCAATCCAATATTTAATTGCAAAATTAGGAACAAAATCCAATAATCATTGAGGTATTAAAATGGGTTAAATTTTTCGTCTTAATTGGAAAGCTATTTGAAATTCTATATATAATTTTTTATATACGTGTAGACAATAGAGTGACACATGTGTTGGATTGTGTAAGATTTGCATATGGTTTCATCAATGGTTGCTTCGATATCTTTCTCTTCTTTTTTCTTTTTGGAATTAATGCGAAACTCTATAGAATCTAATTTCTTTTCTTGTTTTCTTAATTAAATTCTTTTCTTTTGGAGAGACTTTTATTGCCAGGAACTTTCAAAGTTCTCAAATTGTGTTGAAATTCGTTAGTACAAACTTTTGTCACCTTGATGATGATGGGAGAACAAATAAAAATGTGTTTTGCATTAAAATTTACATCAAAGTCATTCACTAAAAAACGAGAGATCAATACATGAAAAACTACATAGTTCTTTAACGAAAAAAACAAAAGATCAATGAGTGAAAAGTTACATAGTTTTTTATTTCGTTATTTTTCAGAGTTGTGTCTATCTAATCTCCAAACATGAGTTAAAAAGTATTCAATAAAAAGTTGTTAAATTTTTGAAGAGGTATTAAATTTGAAGGTATATCATTCGTTAGAGTTCATGGTTTCCTCGAAAATTGATTTTATTAGTTTAGTATTTTTGAAATCGTCCTCTGGAGCCTAAATCCTTAATTTCTTAATCACTTTGCTTGTCCCCTAAGTTAGAAAAGAAACCCCTAAAACTCAGCTCAATTTCAGTGAGTATAACACTGCAAGTTTATCCAATTAATTGACACATCCTAACCACGGAAGTTTTGCCATATTGTACTGCCAAGTATGCCAACATGTGCCACATAAGCACTAACTATGCTAATACAGACTTTGATATTAATGAAAATGAACATCAAATATAATAATATAAGTTCAACATGAAGGGTACATGAAAGGTTGATCAAACATACTTTTCAAGGAAGTGCTAATTACAGCACTAAACAAAGGTGTTGTATTTCATGAATTGAACTAAAATGTATAAATGTGACCCTTTTAATTTTTTTTATTTATGTTAGTTTGATTTGCTAACACTCAAACTATTTCAATTAAGGTAGAATTTCGTAGACTATTAAACTCTACAAACTAGTAGCTGAAGTGATAGCGCAGTGATGGCCAAAGTTGGTCACATAAACGATGGTTAGAGTTGGTTACAAGTAGTCATTGTTGAAATCGGGCATCATAGATAATGATTATTGAAATTGGTCACTCGGTGTGACCATCAAAGTTGTCTGTGGTGGTGGTTGTCATTGGATGGGGACATTTTTTTACTTTTAAAAAATACGTGTTTTAACATTGAATGAATTATTATAACGTATCCAATCCATTTCGAATGAGAGCTTAAAACCTATTTAAAAATTAGAAGCATAACACTTATAATATTAACTTTGTTAATGAAACTTACAGGACTTATAATTATTTTTATATAAAGAAAGTTATAATTATTTGGTAAAGAAAAAGTAGTATTTATTTATTGAGAAGACATTTTAACTTTGATAACACAGGAAAAACTTGGATTATGCCAACAATTATTGTAAATAATTATTCTAAATTCATGCACAACTTCCAAAATTTCATATGTCCATTCTCTTGATTGAAGCATAATAATTTATTATATTATATTGCAGTGTGTTTTCCATAGTAATAAAAAACAATTTGTATAGCATAAGTTAAAGGTAAATTGATAATATTTATTATGTATTGGTTGAAGTGGGAAGTTTAAAAGTGGTATAAAAACGATAAAGAAAAGATTGGGATTGAGGTGTGAAAAAGAAAAAATGAAAAGAGTCATATGGAACCCATTTAAAACTGTTACTGATAATATGATTAATTGCGTAAGGAATATAATTCCAACTGTCAAGTCCTTTTCTAACTAAACCATCTTATTATTCTTAATTAAACAATCTCCTACCCTTCCCTTCTTCACCTACTTAACTTAATATCTTTATATCATTATTGTACTATACTATATATATTATATCATATCTGCTTCATTATATATTCATTCAATTTATTAACAGTAGTTTTGGACCCAATACATCTAATTAACGTTTGGTAAATTTTAGAGGCAATTTCAAAATAAATAAATGAAATCCAACTAGCTCCATCACCCAGTTCGGCTTGGGAACATAACAGATTGGTCCACGTCTATCTAAATGAGCATTGATGGTGGAAAACCAACTATTTAATACTCAAAGTTTGGTTTGAAAAAGTCATTAATGTAATTGAATTTTCAAAAAAAGAAAAAGGAAATTAAACTCTAAATAATAATTGGGAGAAAACTTGAGGTTCACAATTGTTTTTGGAATCACCACCCTGATTCCCACATAATTAAAGGGAAAATTTTGGAAGGATGATGAAGAATAAATGGGGGGGTGGGGAGGAGGACAAAGAACATCACATCCACCTCCCCGTCCTATCCATGAACATCTCTAACTATCTTCATTTCCCTTTAATTTACCAATCAATTCTCTTTAACTTCCACTCTCATTTCCTACTTTGTCGAGGTCGACTCTACCGCAAAATAAGCAAATGCAATACTTAGATTAGACGTTTTTTATAAATTTATTCCATCAATTTTATTTGTCTGGTCCTACAATATTTGAGTATCATTCGTTGTGTTCTTCATGAATTGAATCTAAGACCTTCTAGTTATTTTTTGAGATTATGATTAGTTTTTCTTTCTTTTAAGGCCATGTTTTTCTCTCTCTAAACAAATTTATTGTTGTGGTTATCCGATAGTCAAACCTTTTTTTTTTGTTAGATTTTTGGAAGAATATTAAAAGTTTAGTTGTCATGCATTAAGAAAAATTGAGGAAAATCATGAGTTTTTTCTACAGGGTAAGAAAAGTCATAGTCTAAGGAACCTATGCCTTTGGTTTTCAATGGTCTATTAGAAACAATTTAAACTTTAATTTTAATTAAATTACTTTTGTATTCTCTAATTAGAAAGTGAAAAAAAAGGATGTATCAGTCAAAAGCTTGACAGAGTGTCCTTGTAATTGGGGTTAGTAAAAATTAATTATTTTTTGTGATGGTGGTAAATTTTCATATAATAGATTTATTTATTATTCATGGTTTTTTTCTACGAGTTAGAATTTTTCACGTATTTTCAATTTTTATTGGTTTTTTCTTTTTAAATTTCTCAATCATTTCTATGCTGATTTTGTGCAGTGTAGAAGTGGGAGTCTTTTCCTAACATTTTTCTATTCAGATCTTGACGTTAAGAAAACAACTAATATATTACTATTTTTTTTCTTTTCTTGTGAACTTTGAACATATATAAATCTTTTATGTTGTTTAGGTATTCAGAGAATATACTGAGTATACTTGTTATAAGAAAAAAAAATGTCTATCTACTTAAGAAAATATCAAATTTTACCGTTTTGGATGATATCAATTGAAACTTTAATACTCTATCAATTTAAACTCTAAACTTTGGTTAGCATGTACAAAATTCACACCATTATTTATATTTTGTTCGAAAAATATTTTGTAAAACTTATAATTATTTTAACCAAATTACTTCTAAATTATGTATCACAATCAATCTAGAATCTTTGTTAAGATTATACGTGAAAATTGTCCATTGATCAAGCCTTACACGTATACACACTTCTTCCAAATACTTTGGATATTAGTAAAATGAACGATAAGAATTAGTGCATGGATATATTTAAGAAAAATCTCATCGAAGATTTAAATTAAGTCATTTATGAAAGTTTAGAGTTTAGCGGTTGACAAAATAATACAATGTTTATCCAAATATAATATAACGAAAAATGATATAACTAAGCTTATATCAATATCTATAAAAGCTCACGATTCTAATTTTGACACAACCTTGAACATTAAAAAAAAAAAAAAGATGTTTTCATATATAAATTACAACTTCTAAAAAAAATCATCAGGTGCATGTAGACTTAGGAAAACAACTTTCTTATTAGAAAGTATTTTAAATTGATAATTACATGTGGTATTAGTTCATATGAACCTAATTTAGAAGAGATAACACCAATGATTAAATTATATATATGAAAAAAGAAAAGGATAGATCATACTCTATTTTGGTGGAAACTCATTTTGAGGTTGCTTTTTGAAATTAAGTGTTCTTCTTTTTTTTTTCCTCATTTTGTTTGGTTTTAGGAATATAGGGAAATTAAATGATGATAAAGAAACAAAGATTGTTCCAATTTTGCAAATATTAATTACTATACACATACAATTAAGAGAGCCAATGAGAGTTTAGTGATGTTGATATTACTAATACTCTGAATTATTATTACAATTAATTAATCAAGCAAATTTGTAGCAATTTATTTATCTATCCTACCATATATATATATATATATATATTCATTCTTTTTTTTTTTTATTAATCATTTTATAATTTTATTAGTTTTGTATACTTTTCAAATTTCCTGCTGGGAAGAAATGGAAACATCCAAAAACTGAAGTTAAAAAACATTCCTTAATTAATTATATATGGGAAGACATTTTTCATTTGGCTGCATTCATCTGCCCCAAATCCTATTTATTTTTTAATTACCATATCTCATATATTACCTTTTTTTAATAGGAACACTTCTCTCTACACTCTTTTGTTTTTATAATTCTTCCTCTTTTATACATATGAGACGTATTTTAATTTGGAGAGAGTTCAAATCTCAATCACCTCCAAATGTTTTATTGAATTATATCTATGAAATGCTACAAGAATTTAAATATATTTTTGGTCTTCCAAATTTGATTTAGCTAGGTTGCAACATTTCTAAGTTTTCAAACAGAGTCGATAACATTCACGAATTCTCTATTAGTTTTTAAATTTCTCTCTCTTTGTTAATTATTAATGGAAAGTTGATGGGCACATATATTTTATTCTATTAAAAAATGTTAAATTTTTAATTTTAATTTCTTTAATTCTTCTTTATCTCTCATCCTTCCCTTTCCCTTTCCCTTTCCCTTTCCTTCTTTCATCTTCTTCCTTCACCATCAACAGTAGCCATCGAGGTGTATGGTTGTTGGTGGTGACACTGGCGACTGTTGTATTATTTTTCTTTCCTCCCCCCCAATATCTAATTGCTTCTTCTTCTTCTTCTTCTAATTAATTTTCCCTTCCTCTCTCTTTTAGTATATATTTTTAAGTGAACTGTGAGACAACACAAAAAATATATATACATAGACACACACACACCTATATCTCATCATGATACCCCGACCGTTTATATGTTGAAGCCCAAGTTGAAACTTAAAGAGACTTCCATTTTATCCAAACAAGTTTCTTCAAGTTTTAAGATATCTTTTTAAAGCCAATCTAAACGTATAAATTATCCAAACAATTAAAATATCATTCTCAAACACTCAAATCCTCATCACTTCCCTGTGTTGTTGAACTTAAACAAACTCAACATCTTTCGTTGATTGGATAAGAATATGATTGTTGGCTAATTATCTTTTTTTCATTTTCATTAATTACATTAAAAAAAAGCCCAACACCATCCTTTTTTAAACATAAAAGATATGAATTAATTATAATTAGGGCATTTTCAAATATATCAAATGTGTATCATAATATCTTTCAACTGTTTAAATTAAACTTTGGTCACTTTTTAACTTCATCTACACAACCTGGTATGCGACCGAATTAAGGTATAGATTCATTACATAATTAATTAGCATTGGTTTTAAGAGCAATGAAAATAAATTGACTAAGTTTATGAATGTTTGATGGAATGGGCCACAATTAACCGGTATCAAATAATAATACTGAAAATTATGGTGGGTGAAAATTTTAGAATATTGATATTTTAAGTGTCACATATTTTTATTTTCATTTTGATATGACACTTCTTAATTAGTGTATGAAGTGTATCGAGTATATCGAATGTATATGATTAGTAGTGTATCATGTGTATCAAATGTATCAAGTGCGTCATGTGTGTATCAAGTGTGTATTAGTCGTAGGATACACTAGATGACCACCAAACACTTTAGTCGTGATGACCTTTGTAAATGGATGAGCAAGGTTATCTGTAGAGACTATCTGAGTAACTACCACAGTCTTGGATAGATTTGAACCATAGGGTCGAGAACTTTAGGCAAGTTCTCTTTATGTTTGCCAAAATAAGCATCCCTAGTCCGTCATAGGCAGAAAAGTGATTGTGTGGAAAGACATTGATAGAAGAGTCAAATACGAAAATAGAATAGCTAGTTTTCCGTGTGGAAACTGAAAAAGCAAGAGAAAAACGAATAGGGTAGGACTTATTAATATGAATCCAGAAGAGAGCAAACTATCAATAAAGAGAAAGGCTTGAACGTGAAATGGTTTTTTTTTTTTTTTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGAGGGGGCAACATTGTTCATTGAGGCGGCATGAGAAATTTCCACCCACTTGGTGTACTATCTCCTAGTGAGATGATATTTTCGCTTAGTATGTTTTCCACATTTATGGCTTTTGAACTCTTTGGAATTTACAATTGAATTATTTTCACAATAAAGAGTGACAAGAAGATGCATATTTGGAACAACTTCCAAATCTATTAAGAACTTCGATTTTACTGCTTCTTTTGATGCCTTGCTGCTTTGTAGGCAACTACACATATTCAACTTCCATTGTGGAGTCAACAATGTAACTTTGTTTGATATTTTGCTAGACTATTGCTCCTCTATACAAAGAGAACACCAAACTTTACTAGATTGAAAATCAGATTCAGTGTATTCTGTAAGGATCAGATTTCCACCCCCATATACAAGCACATAGTCCCTCGTTCTCTAAAAATACTTGAGGATATTCTTAACGATGGTCCAATGATTATATCCTAGGATTAGACTAATACCTGTTGACTATCCCTATGACTAGCATATGTTAGGTCGTGTATAACACAACATACATCAGGCTACCAACTGCTAATGCGTAATGAATGTGTCTCGTATCCTAACCTTCTCGAGGTGTCTTAGAAAATTGTTCCTATGGTAAATGAATTCCATGTCGAAAAGACAAAACCCCTCTTTTGGAGTTCTGCATCTTATAATTACTAGACAACATTTTGTCAATATAAGTTGTTTAAGACATGGCTAGCTAGTGTTCTGTTCCAATGATTTCGAATATTTGGATCTCAAGAAAGTATTGTGCTTCTCTCAAATCTTTCATTTGAAACTGTGTAGCTAACCACTTTTTAGTGTTAGTCAAGTATCCTATATAGTTTCTAATGAGTAGGATGTCATCAACATACAACACTAAGAATGCCACAGTTGCGTTAACAATCTTCTTGTAGACACAAGATTTGTCAATATTATGGACAAAGCGATAAGATCTTATCGTATTGTCAAATCTTATATTACAGGATCTAGAAGATTGTTTCAACCCATAAATGAGTTTGTTCAACTTATAAATCTTTTATTCTTGGCATTATTCTACAAACCCCTTTGGTTGAGACATAAATATTTTTGTCAAGATAACCATTTAGGGTCGTTTGGGGCAAGAAGTGAGTTATTATAGTCTTGGGAATATAATAGCCTGCATTTGAGAATTATAATAGTCTGCGTTTGCTATGCATAGTACTTAGTCTGGGTTATTATAATATGTGTTTGGGATCAAACTATTATAGTTTGTGTTATTATAATATATGTTTGGGCTGGAAATCACTATTATAATATGAGTTTTGCACAATTCTTTTTTGGGGTGCAAACTATATTATAGTTTATGTTTGGGGTGGAGACTATTATAATATTGGTTTCTCACTACTCATTTTTTGCATACATATATATTGTGCATTCAATTGATTTTATCAAATTTGATTAATTAAGATGTTCATTTAATAAATTTAGCTTTAAACTGGGATTTTGACTTCTGTGATCGAGCGCCTAATTAGTGCCAACATAGAAAATTGGACAAAGAAAAGGTCAACAAACATAAATGATATTACAATTTTTTAATTTTTTTAATGTTACAAGATTTTTTATCTAATTTTTTAATTAAACTAAGTATTCAAATTTATATATGAACAAAATTCATTAGATGATATTTCTTGTGGCATAATTAAAATTTGTAAAATATATAATAACCCTTCGGAGGAGTAAGGAATAGTGATATAGGAAAAATGAGAGTGATGAATGGTGATAGAGGAGAAAGGAGGAAGTGAGAAATTGTGACATACGAAAAATAGGAGAATGAGTATAATAATCCTAATCCTAATTCTAGGGTTATAATAACCCTTGGGCCAAACATGAGAGTTTGCTAAAATAGCTCACTCCACTCTTTCATAGTACGAGGGGCAAACAACCCCTCAAGAATGTAGTCTTGAAATTCTTTTGTTATATCTTATAGTCATAAAATGTGATAATTAATAAAAGTATTGTAATAGACTTTAGCATAGCAATAGGACAGAAGATTTCTTCATAGTCTACTTCTCTCTCTTTGGGTACCACAAGTTTAACTTTAAAGGTCTGTACCTTACAAGTTACATCTCGTTTTCTCTTGTAGATCCAGTTGCAACCAATAGGTTTTAACTTATATGGTTGATTACAAGTTCCCAGACTGAATTGAAGTAAATTGACTCCATTTTAAGGTCCATAATTTTTATCCATTGTTCTCTGTCAACATCACTCATTACCTATTTAAAGGTCAATTGATTCCCGAACTCATCACCAAGTATGAAAAGTTGTGTTTCTATTAAACCTATGTAATGATCAGGTTGATGGATAACCCTCTCACTATGTCGAGGTGCCCTCAACTCTTAAGAAGAATGTGATTGATTAGAAGTACTACTTCCATTAACTACTTTAGTAGAAATATTAGTTTTATCACAACTTTTGTTGATTTATCTGTAGCATCTTTAAAAATCTCATTCAATACCAGTTTACTACAAGATTGATGGTTTCTAATAATGTGGTCTTCCTCTACGAATGTAACATTTTTGATACATACACTCTCTTCTCTTGTGGATCGTAGAATAAACCATATTTTGTTTCTTTTGGGTAACCTACAAATAGGCATAGTTTTGGTCGACTTTTCAATTTGTAAGGTTTTGCACCAACACATCCCCAATTTGAAGCAATTTAAGCTAACTTTACACTTTTTCCAAACTCATACGATGTTTCTGAAACACTTTTAAATTGAATGTTATTCAAATTATCGACAACAGTCTCTAATGCATGTCTCCAAAAGAATTAGACAACTAGGTAAAGCTCATCATGGAGCAAACCATGTGATTGGTGATATAATTGATACCTACGTTATATAATGCCCAAGAAAAATAATTCACTAACATTGAAAATTTAAGCAAGTTTCCAACTTAGTACTGATCTGCAACACTCCTACTATAGTGCCTCACGTAGAGCTAACTTAATGATCACTTAGGCTTGATAACGTGTATAAATACCTGTTATTATAGTTTCTTTTATTAAAATAATGAGATCAAAATGTATAAGAAAAGGATCAAAACACATAACTTATGTGGTAAAATACATAAGTATTTAGAAATACATCCTACATAAGCATTATGCATGTTTTACGCGATTGTCATGTCTAAACGCAGGATGAGTAGAAAGGAAGAAACTAGTGAATCAAATGGGACATCTCGCGCAAGGCCTATGCGATGAAAACTCATTTGGCGATTAACATCACCTTCAGACGAGAGGAACCACATCATCACGTGAGGAAGATTTCCTATGTGTTTGCCTAGCATTAAGATAGTGAAGCTATCTCTATGTGCACATAAAAAGGTATGGCAAGTCTAGAACTAAGTATGTGTTCACTTAGGCAAACTCTTTGGTGTGAGATGCTTATACAGATTGTTGCAGTCGAGTGTGTGAGTTTTGTCCACATCCAAGATGGGAGTCAACTGAGTGTTGTGCACTTAGGCACTGGGAGTTTGAGTTTGCATGCCTACACCAGTAACTAGGAGTGTTTAGTATGTTTCAGTGTTCAAATCTAGATACATTGAGCATGTGTTCGCCTTGAGAGATGTGAATAGGTTCAAGCTAATGATTGTTTTGCATGAAACGTTTGGTGATGACTCATTACTAGATGAGTGTCTAAGGAAGAAAATTATTTTAAAACTTGGTTTCTTTGCGTTGTGTTTGTTTTCTCAAAGAGTTTCTGGCATCTCAAGGATCTGTTATTTGTCATGTAGCACAGTGTGTCTGTATTGTTTCTTTTCCTTTTACTTGTTATTTTAGTTGTTTTAGATGTTGTTTGTGCTTTTTGCGTGACCTTTGTGAATGAGAAAGAGATGTGGGGCCTTTTTCAAAAAACTTAACCTCAAACATTAAGGAGTGAATTTGAGAATATAGAAATTATATCTAAGCTAGGCTGAGGTTAACTCTACCTCTTACAAGTTTTAATAATACTCTTTTTGGTCTCCACTAATAAATTTATTCAACTAAGAAAGGATGACTTTTAATTAATAGTTTTGGGATGACATGGAAAATTTTATAACTAAAATATATTGATCTTCCTCCCTTTCTCTAATTTGTTTGTAACGCCCCTACATCTGATCATCTCTAACACTCTTATTGCCTCCTCTTAAAAAGATAAGGAGATGGAACATTAGGGTGTGCAAGAAGTATATGCCAATATTAAAGTATTGATTATATTTCACTATTAATTGTTATTAGATTCAACATAACAGTGATTATTGAAGATGTGATGGAAGAATAATGTGAGTTGGAGAAAGATGGCAGCACCGAATACAAACAAGCTGGATATCATAAGCATTTCATGAGAAAGAGACTACAGTTTGTGGGGTGGAAGACGAAGAAACAAAAACATTTTCTTTAGAATATGTGAAAGGTATAGTTTTGTAGTACAAGTTTTAATTGGAAGGTAAAATATAGGTTTCAAAATTAATGGTTAGGGTAAAATTAATGTAAATAATGAAGAGGAAATTAAGGGTCCAAATATTAGGCTCCTAAAGTTTGGTGAAGATTACTAGCTAGGGGTGATTTCAAGTATTAATTAATTGATGTGGAGAACTAAAACTCCACCAACTTAATAAATAAATAACAATCACAATAACAATAATAATAACCTATGGGTTTTAATATTTGATGTGAAGTCTCCTCAATAATAATCTCTTCATTTGATTCGGCGGCGGATGTCACTAAATAAGCTTCCCATTTTTGCTTAATTAATCAATTATTTTCTTTTTTTAATTTTCATTTGTTTATAAACCAACATCCTATATACATATATTTTAATCTATACAGCTTTGCTTCAATTCTTTCTAATTTCATCCTATTGTAAAATAAACTCAAACTATTTTACAATGTAATGATAAACTTTAAATTCA

mRNA sequence

ATGTATCTTCAGTTTTACATAAACGAAAATGGTGATAAAGTCTACACCACAAAGAAGGAATCTCCTCTAGGTTTGGCCACGCAATCTGCTCATCCAGCTCGTTTCTCCCCTGATGACAAATATTCGAGGCAAAGAGTTCTTCTTAAGAAGCGATTTGGCTTGCTTCCTACACAGCAGCCACCTCCAAAGTACTGA

Coding sequence (CDS)

ATGTATCTTCAGTTTTACATAAACGAAAATGGTGATAAAGTCTACACCACAAAGAAGGAATCTCCTCTAGGTTTGGCCACGCAATCTGCTCATCCAGCTCGTTTCTCCCCTGATGACAAATATTCGAGGCAAAGAGTTCTTCTTAAGAAGCGATTTGGCTTGCTTCCTACACAGCAGCCACCTCCAAAGTACTGA

Protein sequence

MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
Homology
[Close]
BLAST of CsaV3_3G022140 vs. NCBI nr
Match: XP_011651438.1 (PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like protein [Cucumis sativus] >XP_021665893.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Hevea brasiliensis] >PIN05065.1 H/ACA snoRNP complex, subunit NOP10 [Handroanthus impetiginosus])

HSP 1 Score: 136.3 bits (342), Expect = 3.6e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 1  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60

Query: 61 PPKY 65
          PPKY
Sbjct: 61 PPKY 64

[Close]
BLAST of CsaV3_3G022140 vs. NCBI nr
Match: XP_009410656.1 (PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like protein [Musa acuminata subsp. malaccensis] >XP_009410663.1 PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like protein [Musa acuminata subsp. malaccensis])

HSP 1 Score: 135.6 bits (340), Expect = 6.1e-29
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQFYINENGDKVYTTKKESPLG+ATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 1  MYLQFYINENGDKVYTTKKESPLGMATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60

Query: 61 PPKY 65
          PPKY
Sbjct: 61 PPKY 64

[Close]
BLAST of CsaV3_3G022140 vs. NCBI nr
Match: XP_008447412.1 (PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like protein [Cucumis melo] >XP_016900440.1 PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like protein [Cucumis melo])

HSP 1 Score: 135.2 bits (339), Expect = 8.0e-29
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQFYIN+NGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60

Query: 61 PPKY 65
          PPKY
Sbjct: 61 PPKY 64

[Close]
BLAST of CsaV3_3G022140 vs. NCBI nr
Match: XP_021663890.1 (H/ACA ribonucleoprotein complex subunit 3-like protein [Hevea brasiliensis])

HSP 1 Score: 134.8 bits (338), Expect = 1.0e-28
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDK+SRQRVLLKKRFGLLPTQQP
Sbjct: 1  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKFSRQRVLLKKRFGLLPTQQP 60

Query: 61 PPKY 65
          PPKY
Sbjct: 61 PPKY 64

[Close]
BLAST of CsaV3_3G022140 vs. NCBI nr
Match: XP_015957125.1 (H/ACA ribonucleoprotein complex subunit 3-like protein [Arachis duranensis] >XP_015968038.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Arachis duranensis] >XP_016190259.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Arachis ipaensis] >XP_016207587.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Arachis ipaensis] >XP_025690500.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Arachis hypogaea] >XP_025603224.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Arachis hypogaea] >XP_025638752.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Arachis hypogaea] >XP_025663306.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Arachis hypogaea])

HSP 1 Score: 134.0 bits (336), Expect = 1.8e-28
Identity = 62/64 (96.88%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQFYIN+NGDKVYTTKKE+PLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 1  MYLQFYINDNGDKVYTTKKETPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60

Query: 61 PPKY 65
          PPKY
Sbjct: 61 PPKY 64

[Close]
BLAST of CsaV3_3G022140 vs. TAIR10
Match: AT2G20490.1 (nucleolar RNA-binding Nop10p family protein)

HSP 1 Score: 116.7 bits (291), Expect = 5.3e-27
Identity = 55/64 (85.94%), Postives = 59/64 (92.19%), Query Frame = 0 

Query: 1  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQ YINE G+KVYTTKKESPLGLAT+SAHPARFSPDDKYS+QRVLLKKRFGLLPTQ  
Sbjct: 1  MYLQCYINEKGEKVYTTKKESPLGLATESAHPARFSPDDKYSKQRVLLKKRFGLLPTQNA 60

Query: 61 PPKY 65
          P +Y
Sbjct: 61 PLQY 64

[Close]
BLAST of CsaV3_3G022140 vs. Swiss-Prot
Match: sp|Q93XX8|NOP10_ARATH (H/ACA ribonucleoprotein complex subunit 3-like protein OS=Arabidopsis thaliana OX=3702 GN=At2g20490 PE=3 SV=2)

HSP 1 Score: 116.7 bits (291), Expect = 9.6e-26
Identity = 55/64 (85.94%), Postives = 59/64 (92.19%), Query Frame = 0 

Query: 1  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQ YINE G+KVYTTKKESPLGLAT+SAHPARFSPDDKYS+QRVLLKKRFGLLPTQ  
Sbjct: 1  MYLQCYINEKGEKVYTTKKESPLGLATESAHPARFSPDDKYSKQRVLLKKRFGLLPTQNA 60

Query: 61 PPKY 65
          P +Y
Sbjct: 61 PLQY 64

[Close]
BLAST of CsaV3_3G022140 vs. Swiss-Prot
Match: sp|Q6DRH5|NOP10_DANRE (H/ACA ribonucleoprotein complex subunit 3 OS=Danio rerio OX=7955 GN=nop10 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 3.5e-20
Identity = 45/62 (72.58%), Postives = 51/62 (82.26%), Query Frame = 0 

Query: 1  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          M+LQFY+NENG++VYT KK  P G  T SAHPARFSPDDK+SR RV +KKRFGLL TQQP
Sbjct: 1  MFLQFYLNENGERVYTLKKVDPSGQPTSSAHPARFSPDDKFSRHRVTIKKRFGLLLTQQP 60

Query: 61 PP 63
           P
Sbjct: 61 RP 62

[Close]
BLAST of CsaV3_3G022140 vs. Swiss-Prot
Match: sp|Q9NPE3|NOP10_HUMAN (H/ACA ribonucleoprotein complex subunit 3 OS=Homo sapiens OX=9606 GN=NOP10 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 8.7e-19
Identity = 42/62 (67.74%), Postives = 50/62 (80.65%), Query Frame = 0 

Query: 1  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          M+LQ+Y+NE GD+VYT KK  P+G  T SAHPARFSPDDKYSR R+ +KKRF +L TQQP
Sbjct: 1  MFLQYYLNEQGDRVYTLKKFDPMGQQTCSAHPARFSPDDKYSRHRITIKKRFKVLMTQQP 60

Query: 61 PP 63
           P
Sbjct: 61 RP 62

[Close]
BLAST of CsaV3_3G022140 vs. Swiss-Prot
Match: sp|Q9CQS2|NOP10_MOUSE (H/ACA ribonucleoprotein complex subunit 3 OS=Mus musculus OX=10090 GN=Nop10 PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 8.7e-19
Identity = 42/62 (67.74%), Postives = 50/62 (80.65%), Query Frame = 0 

Query: 1  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          M+LQ+Y+NE GD+VYT KK  P+G  T SAHPARFSPDDKYSR R+ +KKRF +L TQQP
Sbjct: 1  MFLQYYLNEQGDRVYTLKKFDPMGQQTCSAHPARFSPDDKYSRHRITIKKRFKVLMTQQP 60

Query: 61 PP 63
           P
Sbjct: 61 RP 62

[Close]
BLAST of CsaV3_3G022140 vs. Swiss-Prot
Match: sp|Q9V5P6|NOP10_DROME (H/ACA ribonucleoprotein complex subunit 3 OS=Drosophila melanogaster OX=7227 GN=CG7637 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.1e-18
Identity = 44/64 (68.75%), Postives = 51/64 (79.69%), Query Frame = 0 

Query: 1  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYL + INENGD+VYT KK +  G  T SAHPARFSP+DKYSRQR+ +KKRFGLL TQ+P
Sbjct: 1  MYLMYTINENGDRVYTLKKRTEDGRPTLSAHPARFSPEDKYSRQRLTIKKRFGLLLTQKP 60

Query: 61 PPKY 65
           P Y
Sbjct: 61 EPIY 64

[Close]
BLAST of CsaV3_3G022140 vs. TrEMBL
Match: tr|A0A2G9GIP1|A0A2G9GIP1_9LAMI (H/ACA snoRNP complex, subunit NOP10 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22395 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.4e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 1  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60

Query: 61 PPKY 65
          PPKY
Sbjct: 61 PPKY 64

[Close]
BLAST of CsaV3_3G022140 vs. TrEMBL
Match: tr|M0S1K9|M0S1K9_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=103992599 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.1e-29
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQFYINENGDKVYTTKKESPLG+ATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 1  MYLQFYINENGDKVYTTKKESPLGMATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60

Query: 61 PPKY 65
          PPKY
Sbjct: 61 PPKY 64

[Close]
BLAST of CsaV3_3G022140 vs. TrEMBL
Match: tr|A0A1S3BHD2|A0A1S3BHD2_CUCME (H/ACA ribonucleoprotein complex subunit 3-like protein OS=Cucumis melo OX=3656 GN=LOC103489864 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 5.3e-29
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQFYIN+NGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60

Query: 61 PPKY 65
          PPKY
Sbjct: 61 PPKY 64

[Close]
BLAST of CsaV3_3G022140 vs. TrEMBL
Match: tr|A0A2P2IS35|A0A2P2IS35_RHIMU (H/ACA ribonucleoprotein complex subunit 3-like protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 5.3e-29
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQFYIN+NGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60

Query: 61 PPKY 65
          PPKY
Sbjct: 61 PPKY 64

[Close]
BLAST of CsaV3_3G022140 vs. TrEMBL
Match: tr|A0A1Q3CIS0|A0A1Q3CIS0_CEPFO (Nop10p domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_23611 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.5e-28
Identity = 62/64 (96.88%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQFYINENGDKVYTTKKESPLGLAT+SAHPARFSPDDKYSRQRVLLKKRFGLLPTQ+P
Sbjct: 1  MYLQFYINENGDKVYTTKKESPLGLATESAHPARFSPDDKYSRQRVLLKKRFGLLPTQKP 60

Query: 61 PPKY 65
          PPKY
Sbjct: 61 PPKY 64

The following BLAST results are available for this feature:
BLAST of CsaV3_3G022140 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011651438.13.6e-29100.00PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like protein [Cucumis sativ... [more]
XP_009410656.16.1e-2998.44PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like protein [Musa acuminat... [more]
XP_008447412.18.0e-2998.44PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like protein [Cucumis melo]... [more]
XP_021663890.11.0e-2898.44H/ACA ribonucleoprotein complex subunit 3-like protein [Hevea brasiliensis][more]
XP_015957125.11.8e-2896.88H/ACA ribonucleoprotein complex subunit 3-like protein [Arachis duranensis] >XP_... [more]
BLAST of CsaV3_3G022140 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G20490.15.3e-2785.94nucleolar RNA-binding Nop10p family protein[more]
BLAST of CsaV3_3G022140 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q93XX8|NOP10_ARATH9.6e-2685.94H/ACA ribonucleoprotein complex subunit 3-like protein OS=Arabidopsis thaliana O... [more]
sp|Q6DRH5|NOP10_DANRE3.5e-2072.58H/ACA ribonucleoprotein complex subunit 3 OS=Danio rerio OX=7955 GN=nop10 PE=3 S... [more]
sp|Q9NPE3|NOP10_HUMAN8.7e-1967.74H/ACA ribonucleoprotein complex subunit 3 OS=Homo sapiens OX=9606 GN=NOP10 PE=1 ... [more]
sp|Q9CQS2|NOP10_MOUSE8.7e-1967.74H/ACA ribonucleoprotein complex subunit 3 OS=Mus musculus OX=10090 GN=Nop10 PE=3... [more]
sp|Q9V5P6|NOP10_DROME1.1e-1868.75H/ACA ribonucleoprotein complex subunit 3 OS=Drosophila melanogaster OX=7227 GN=... [more]
BLAST of CsaV3_3G022140 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2G9GIP1|A0A2G9GIP1_9LAMI2.4e-29100.00H/ACA snoRNP complex, subunit NOP10 OS=Handroanthus impetiginosus OX=429701 GN=C... [more]
tr|M0S1K9|M0S1K9_MUSAM4.1e-2998.44Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=103992... [more]
tr|A0A1S3BHD2|A0A1S3BHD2_CUCME5.3e-2998.44H/ACA ribonucleoprotein complex subunit 3-like protein OS=Cucumis melo OX=3656 G... [more]
tr|A0A2P2IS35|A0A2P2IS35_RHIMU5.3e-2998.44H/ACA ribonucleoprotein complex subunit 3-like protein OS=Rhizophora mucronata O... [more]
tr|A0A1Q3CIS0|A0A1Q3CIS0_CEPFO1.5e-2896.88Nop10p domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_2... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
GO:0001522pseudouridine synthesis
Vocabulary: Molecular Function
TermDefinition
GO:0030515snoRNA binding
Vocabulary: INTERPRO
TermDefinition
IPR036756H/ACA_rnp_Nop10_sf
IPR007264H/ACA_rnp_Nop10
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0001522 pseudouridine synthesis
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0010197 polar nucleus fusion
biological_process GO:0001510 RNA methylation
biological_process GO:0006487 protein N-linked glycosylation
cellular_component GO:0005575 cellular_component
cellular_component GO:0072588 box H/ACA RNP complex
cellular_component GO:0015030 Cajal body
cellular_component GO:0005730 nucleolus
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0008250 oligosaccharyltransferase complex
molecular_function GO:0030515 snoRNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G022140.1CsaV3_3G022140.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007264H/ACA ribonucleoprotein complex, subunit Nop10PFAMPF04135Nop10pcoord: 3..52
e-value: 1.2E-20
score: 73.2
IPR007264H/ACA ribonucleoprotein complex, subunit Nop10PANTHERPTHR13305RIBOSOME BIOGENESIS PROTEIN NOP10coord: 1..64
IPR036756H/ACA ribonucleoprotein complex, subunit Nop10 superfamilyGENE3DG3DSA:2.20.28.40coord: 8..59
e-value: 1.7E-8
score: 36.1
IPR036756H/ACA ribonucleoprotein complex, subunit Nop10 superfamilySUPERFAMILYSSF144210Nop10-like SnoRNPcoord: 3..58

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G022140CSPI03G22420Wild cucumber (PI 183967)cpicucB144
CsaV3_3G022140CmaCh19G000970Cucurbita maxima (Rimu)cmacucB0621
CsaV3_3G022140CmaCh02G017390Cucurbita maxima (Rimu)cmacucB0710
CsaV3_3G022140CmoCh19G001100Cucurbita moschata (Rifu)cmocucB0604
CsaV3_3G022140CmoCh02G017820Cucurbita moschata (Rifu)cmocucB0696
CsaV3_3G022140Cp4.1LG15g00900Cucurbita pepo (Zucchini)cpecucB0304
CsaV3_3G022140Cp4.1LG05g01130Cucurbita pepo (Zucchini)cpecucB0902
CsaV3_3G022140CsGy3G021490Cucumber (Gy14) v2cgybcucB117
CsaV3_3G022140Carg16885Silver-seed gourdcarcucB0789
CsaV3_3G022140Carg08959Silver-seed gourdcarcucB0816
CsaV3_3G022140MELO3C012871Melon (DHL92) v3.5.1cucmeB209
CsaV3_3G022140ClCG07G001140Watermelon (Charleston Gray)cucwcgB265
CsaV3_3G022140MELO3C012871.2Melon (DHL92) v3.6.1cucmedB203
CsaV3_3G022140Cla97C07G129420Watermelon (97103) v2cucwmbB245
CsaV3_3G022140Bhi05G000142Wax gourdcucwgoB309
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G022140Cucumber (Chinese Long) v3cuccucB073
CsaV3_3G022140Cucumber (Chinese Long) v3cuccucB110
CsaV3_3G022140Cucumber (Gy14) v2cgybcucB122
CsaV3_3G022140Cucumber (Gy14) v1cgycucB389
CsaV3_3G022140Cucurbita maxima (Rimu)cmacucB1054
CsaV3_3G022140Wild cucumber (PI 183967)cpicucB152
CsaV3_3G022140Bottle gourd (USVL1VR-Ls)cuclsiB168
CsaV3_3G022140Bottle gourd (USVL1VR-Ls)cuclsiB236
CsaV3_3G022140Bottle gourd (USVL1VR-Ls)cuclsiB243
CsaV3_3G022140Melon (DHL92) v3.5.1cucmeB245
CsaV3_3G022140Melon (DHL92) v3.6.1cucmedB245
CsaV3_3G022140Watermelon (97103) v1cucwmB228
CsaV3_3G022140Watermelon (97103) v1cucwmB251
CsaV3_3G022140Watermelon (97103) v1cucwmB292
CsaV3_3G022140Watermelon (97103) v2cucwmbB215
CsaV3_3G022140Watermelon (97103) v2cucwmbB236
CsaV3_3G022140Wax gourdcucwgoB286