CsaV3_3G022010 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G022010
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3 : 19096020 .. 19102694 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGTGTAAGAAGGTGTTTGATGATTTGTGTCAACTAGGGGTGTAAAAGTATGGGTTGAACTCAAATAATGTGTACTACCAATCCATATTTTAAGGATTGGGTTGGTTAGATTAAAACGTGGGCTAAGTTGAGTTTAAAAAGTTGGATCTTTTCAAGATGGGTTGAGTCTCGGGTTGGAGGGTTAAAAATTCGATTCAACTAAACCCAACTTGAATTTATGTGTATATATATATATATTATTTAATAAAACAAAATCAAAATATTAGGTCAAGGTCTTCCTCAGCTCCCCTTCCACACGCCACTCACAACCTCCCTTTTTTATTTTTCTCTTCAGTCTCACTCTCACTTCAATCTTCGGTCTTCTCTCTCACCATCGGCAAATCTACCTCCGTTTTTTACTCTTCTTTCCATCGTCTCCTCTCTCCCTCTTCGGTCATCTTCATCATCGCCGTCAGATCTCATCTATCCCGTTAGAAAGTAGAAACGAAAAAAAAAATACAACCTGAACAATTCAATCCAACTCATATTTTACCGGTTTGGTTGAAAACTAAATTCGAATTATTTGAATTGTCAACCCATATAATCCGAAAATATGGGTTGGGTTGGGTTGAGAATACCTTCCAACCCAATATCCAATCCAACTCGATTACACCCTTAGCGTCAATGAATATTTGATTCTATTGGAAGTAGAAGTTCAATGTAAGAGTCATTTGTTTATTGCTTTTTACTTTTTCTTTTTCTATTATGAGGGGAGATATATTTATATGGTTTATTTAAATTTATGTGCACTAACTTTTCCTAACTCATTTAGTTTGATTCGCATTTCTTACTTTTGCACGAAATTTGAAAAAGAAAAGCACCGTGTGACGAGAAAGATATGAAATGAAACAAATGAAAATGCTAAATAATCTCAAAATGTGGATCATTTTCTGCCAAAATTCAATTACTTGTTTTTTAATGAGCATTACTTAGGTTACACCATTTATGTCATGAGTTTTTTTTGTTAATTTATTATTTAAATTGTTTACAATGGTCAACCTAAAACACAACACAATTATATTTAAATCTGTGTAGGTATGAAAGTATCTATATATTTGAAGAAATAAATATCAAGTTAGAGTATTTTTAAAATAATAAAATAAATTAAAATATTTACAAGTTATAGCAAATTTTTGAATTTTAGCAATAATAGAAACTTATAGACTTCTCTCACTGCTTATCATTGTTGCTCATAGAAGCATATTAGTGTAAAATTTTATAATATATTTTAAATATTTTATCAAAATTGCTATTTTTTACACTTTCTTATTCAAATTATATATAAAAAAATAATTGAAGAAGTAACTTTATACTTTAAAAAAAACACAAATATTTTAACTTTGATATGCACATTCATCTTATACCAAGTTACCATGTTCGGTAATGATAATGATGTAATTTGTATTTTATTTAAAAAAATATTTTAAAATTAGACTAATTATAAGTAATTAAACGAATAAAAACATCGATAAATTCATTAGGTTAACTTAACAAGTTTGTTTATACGTTTTCACATGTTACTATTTTAAATATTACTAGCAACGTGCAAGTTATTAAGCTATTACACACAACAAGTTGTACCTTTTATACTAAGAAGATAGCTCTATAAAAGCTTAAAAAAATAAAATAAATAAAAAGGAGAAAACTCGCATAACGACTATTTTATAAAGTCCAAATGATAAAAGACCAACTTTTTATAAAGTTATTATCACATGGTGAAATTACAAGACATTGTAAAATACGTGTGGTATGGTCTAGCTTGAAGCTCGATAATCATTACTTATTCTCGCTCATCTCGATACTCCCTTTTGTTATCATTCTCGATAGCTAACACTTATTTTCACTATGGAGAGAGTTAAATAAGATATAAGGAGAGAAAAGAAAATAAAATGGTATATGGTGGTAGAAATTTAAAATATATGGAGCAAGAATTGAAAATAGACATAGTGTATTATTTATTTATTTAACTGAATTTAATATTTTTCTTTATCAAAGCCACTGAATTTCAAAATGGGCTGTTTTTCAATGGGCCAGCCCAATTCAATCTGGTCTAGCGCGAAGCTCCATGTTCATAAGATTCAGTACTTTATATTCACTTGTAAGAATCAAACGCGGCAACCCTGACGATTCAATTCCTCTTCACTTGTTATCGTTAATCATCAACTTCTGATTTCTGGGCAAAGGAATTTGCGGATCTTCATCTTTCACAAGCCTCGCCACAGGCACCACTCTGATGAGAAACGACATATCGCGATTCGCAAGGTAGTCTTCAATTTTATAAGAGAACGAAAGATTTTGTTTCTGATACAATCAATCCATTTGTATGGATCTAAAGGTCGATAAGTATTCGGAATTTGAATTTCGGGAATAAAGTGGAGAAGAAAATGGTCCTGGAGTATATAAAGAAGGGGTGGGGTTTTAGCGGCTGCCTTTCTATATATTTACATATTTTCTTCTGAATGAATAGTTGGAGTACTCGATTTCTTTTTATGAACTGAATATTCCAATTCTCGAATGATTTGCCCTACTCTTTGATTAGGATGTGAGCCTCCAAAGTAAAGATGAAAATCAAAGAGAAAAAGGACAAAAACCAAAAGGAAGAAAAGAACAATACCCTTTAAGTCCCCCTTTATGCTATTGATTGGGTATCTATCACTTTTTTAATCCAAAGGATAAACCTTTTTTTTTTTCTTAAGTTTTTTTTTTTATGAGGAGATGCTTTATGTGGGAAAATACAGATTAATTGTTCTGTTCTTTGCCATAGAAAGTGATTGTTTTATTACTTTTGCTTGATTATCTATCCAATAGGGTGATATTTTTGCTGGTTGAAAAGAAAGTTTAAACAATGATGGATATTGGTGGAATCCCTGGTTCTGCATAAAGGTTAATTGAAGGTTTTTGATTCTTTCTGTGGGCTTTTCTTTACATATTAAACGTTATTCCTTTTATCCATAAAAGCTCTCGTAGATAACTCAGAGTAGTCAGTAAGTGTCTTCTTCTCAGAGGAGAACCTTTTGTGTTTTATCTAATTATTTGACATTTGGCAAAAAAAAAAAAAGTGAGATTTAAGATTTTTTTTCTTAAACTCCTAGCATTGAGTCTCTCCTGTGAAAAGACTTGTCCAACAAATTGACAAACGCCAGTTTCTTTCATGGTATTTAAGTTTATTGGATGCTGTATTTTAGGAACTCCTTGGTTGTTCGATTCTGTCTCAGCAAATAGAAATGGGTGTCTTTTGACTTAAAACTTTAAGATTGGATGATTCATATCACTAATTAAACTACTCTGCTTCTACTCAGGTTTTGATTTTAAAAGATAAAGGCCTTAGGAGACTTCTACTGCTTGGTACTTTCATTGATACTGATATCAAAGATTTGGAGAATGATGGAGCTAAGTGATTCTGGTAGTTTTCTTTATATTATATAAATATAGAAATACCTTACCAATGATATCATATTTTAAAGTAAAGTACTGATATGGTATTCTTTTTGTTCACGGATTACCTTGAGCCACCTTTGCACTAAAATCAATGAAAGAAAGAAAAGAGAATAAGACTTCTTTGGGAGATATTCAAAATAGTTTTATATACTTGCTTTTGAAATTGTTATAAAATTTATACTAGAGTGGTTGGTAAAAGAAACCATGTTCTGATTTTATGGAAAATAAATGTTTCTAAATAATGAAAAGCAACTATGGAAAATGAGGGAAAACATAAATTTAAAGACTAGTTAGTCAAAACATGTTTTCACTAAACTTTTGTTCAGCAGTCCTTTGATCGTTAATTAAGTGATGCAAGAGAAACCCACGTGAAATGAACCATTTGGAGTTTGAAGTTTATTACACTCCACTAGTACGTTAGCTTGTGATTTAACTCTTGTTTGCCTGAACACGTTTTGAAATGAGGCAAATGTTCGTGGAATATGTGATTGCATTCTACAATAACATTAAGGTACCTACTTGTTAATGAATTGTGATCTTTTCAATTTTAGTGGACAAGGCAGCGGCAATAATAGTTTGGAAAATATGATATTCTACACTAAGAGACAAATTGCACTGGGTTTAAAGATGCATCCAATAGCTTTGGAAGCACCTTTCTGTTATATATTAAAATTAATGAGCATTCCTTATGTAGAAGATTCTCATCAGCTGATATTTGAAGCAATTGTGAATTTTTGGAGAAACTTAACATATTGGTAGCTTTTGTATTAAAAAACCATGGGCCAAGTAAAAGGAATGGATGCTTTTTTGAAGAATCTAATTTGGGACTCAGACCAGAACATATTGGCCAGATTTTATTATTATTATTATTATTTTGGCAAAATAGGAACAAACATTCTGAATTGACTTGTTTTCTAGCTTGTAGGAAGGTACTCTTGTTTGAAATCATTGCTGTAAATTGAGCTAAATTATACACTTGTCATACATAGGGAGGTAGGTTCTTCACTCCACCCACATGGGTACTCTGTAACTCTATGAAACTTGGGAATCTCATAAGGTAATTTCTGAACAGAAGAACATGGGTTTACCTTTTTAGATTAATGGCTTTTAGTTGCTTAATTTGGTGAGAAATGCTTCTATTGCCTTTTTATGAAAATGATGTTCACCTGCCTCTATAGAAGAAAATTGAAGAAAAATGAAGAAAAAGAATTGAGAATCTCTGTACAAAATCCCTAAACTTGGAGTTGAGTTTAAGAATTGAAGGAAAGTTTTCAAACCTTCTTGTAGATCCATGGAAAATAGAAAAAATGGTAAAGTAGTGTTCTTTCTTTATTTCTTTCTTTTAATTACTGGCACTGGCAGTGCAAACGTTTGGCTTTTTGGAGAAGTGATATTTTGTTTGCGACTGTTTTGGATAAGTTTGATCATTTCAGCAGTCCCAATAAAGCCTTCAGAAGGCTATTGGTTGGATTGATAGTCATGGTTTTGGAAGGACCAATGAAAGAGTTTGGCGTTGAACATAATGATGCGTGTACATGAACTTTGAGAATTGGGAAAAGACTACAAAAATTGAAGTTTGTATTGGCTATTATTATAGGTTTAGTGGTCAAATTGGATGAGTTTTTGGACTATTTTTGGAATTGTTTCCCTAATGTCATTGGCTGACAATGATAGATGAGAAAAGCCATGCTTTCTTTTGGCAGTTTGTACTTCTTTTCTTCCAAGAAAAGCCAACTTTCTTCAACTAAACCTACCATTTTCACTCCAAAATTCCTATTATCTTAATCTGATCACTTAGACATTGAATCACTCTAAATTGAGTTTAGGAAAGTTTTTAAATCATTAAGAAAAAGGGGGAGGAGGGAGGAAAATTGATGGGGTGCTGATATTTAGGGATGCATTTTTTTCAGAAGAAGTAAATATTGTGAAATGCCATTTCCCTAAGCCTTTTACTTCATTATGATTTAAGTCATTTTCAATTTGGGCTCTTAATTATTTTTGTTTCAAAATGTTAATAATTTCACCCTTTAACGTATTAAGTTTCTTGATTTTGTTATTTAATAGAAATGGTCAAATATGTAAGAAAAAACACCATATATCATTGAATTATTGTTTTATTTCATATTTGGACGATAGTTTGGACAATTGAACATCTCAATTTTACACTACTACCATGAAACTTATTCGGTATAATAATAAAATGCAAACAATATTTCTTTTTCGAAAGATTAGAGATCAGAATTTTACTCGATGTATCCATCTTTGAAGAACAAGGTTCTGATTGTGCTCTCACGTTTTGTTGGAATCTAACTTATAAAGTGCGGTAGACACTAGAAAAGTTCATTTTGAAATCCTTCCTAAATTTTATTCGGTGAAAAAGTAAAAGTAAAATCAAATTGCCCTAAAGTTAGTAATAATTATTTTATTAGAACTATATATTTCAAGGGTTGTTTTCAAAAAAATGACAACTCTAATCAATAGCAAATTTGATATTTTTTTTTCGTGAAAAACAAGATTTTAAGTAACAATATTTTAAGTTTTAATAAAAACAAAAGTTCATATTTTTTTAAAAAAATGAGGAAAATCACTCGGCCATGCTTACCATATTTAGTAGGTTTTTTTGTCAACCTCATGATGGCTCCATCTTTTAAGCCTTATTATTACCACTATCCTTCTAATCCTCTCATATAACAAAATATTTTACATTCTTTAAAAAACACAATGCACTTGTTCTTGGAAATAGCTAAAAGAAAATGTAAAAAAGTTTCATAAATTATGATTGAACAATTGAATAATAAAATGTATAAGATATAAATGAATTTAAGATGCTATTAAATAATTGTTTTCTTTTAATAATATTATTTTGTTTTTATAAAAGTGATAAAAGTAAGATTAAGGTTGTATGGAAAATAGGTGATTTAAAAAAAAAAAACATGTGAAAGAGAGAGATAAAAGTAAAAAAGAAATTAAAAAAGAAAAATGAAAAGTTGTAAAATAAACAAACAATTGAATATATATATATATATATTAAAAAAATAATATTAATATTTAGAGTCCAAGATTATTGGGTAGAAGTTATAAGTTTATCCCAAGATTTTATTGCTTCAGTATCTTTATAATAATAAATATTTAAACTTTTAGCTGTTGGGTTTTTCTTTCTTTTTTTATATTTTGAAGCGATGAGGATGATTGA

mRNA sequence

ATGGAGAGTGTAAGAAGGAATTTGCGGATCTTCATCTTTCACAAGCCTCGCCACAGGCACCACTCTGATGAGAAACGACATATCGCGATTCGCAAGGTTTTGATTTTAAAAGATAAAGGCCTTAGGAGACTTCTACTGCTTGGTACTTTCATTGATACTGATATCAAAGATTTGGAGAATGATGGAGCTAATGGACAAGGCAGCGGCAATAATAGTTTGGAAAATATGATATTCTACACTAAGAGACAAATTGCACTGGGTTTAAAGATGCATCCAATAGCTTTGGAAGCACCTTTCTGTTATATATTAAAATTAATGAGCATTCCTTATGTAGAAGATTCTCATCAGCTGATATTTGAAGCAATTGGAGGTAGGTTCTTCACTCCACCCACATGGGTACTCTGTAACTCTATGAAACTTGGGAATCTCATAAGATTAGAGATCAGAATTTTACTCGATGTATCCATCTTTGAAGAACAAGGTTCTGATTGTGCTCTCACGTTTTGTTGGAATCTAACTTATAAAGTGCGCGATGAGGATGATTGA

Coding sequence (CDS)

ATGGAGAGTGTAAGAAGGAATTTGCGGATCTTCATCTTTCACAAGCCTCGCCACAGGCACCACTCTGATGAGAAACGACATATCGCGATTCGCAAGGTTTTGATTTTAAAAGATAAAGGCCTTAGGAGACTTCTACTGCTTGGTACTTTCATTGATACTGATATCAAAGATTTGGAGAATGATGGAGCTAATGGACAAGGCAGCGGCAATAATAGTTTGGAAAATATGATATTCTACACTAAGAGACAAATTGCACTGGGTTTAAAGATGCATCCAATAGCTTTGGAAGCACCTTTCTGTTATATATTAAAATTAATGAGCATTCCTTATGTAGAAGATTCTCATCAGCTGATATTTGAAGCAATTGGAGGTAGGTTCTTCACTCCACCCACATGGGTACTCTGTAACTCTATGAAACTTGGGAATCTCATAAGATTAGAGATCAGAATTTTACTCGATGTATCCATCTTTGAAGAACAAGGTTCTGATTGTGCTCTCACGTTTTGTTGGAATCTAACTTATAAAGTGCGCGATGAGGATGATTGA

Protein sequence

MESVRRNLRIFIFHKPRHRHHSDEKRHIAIRKVLILKDKGLRRLLLLGTFIDTDIKDLENDGANGQGSGNNSLENMIFYTKRQIALGLKMHPIALEAPFCYILKLMSIPYVEDSHQLIFEAIGGRFFTPPTWVLCNSMKLGNLIRLEIRILLDVSIFEEQGSDCALTFCWNLTYKVRDEDD
Homology
[Close]
BLAST of CsaV3_3G022010 vs. NCBI nr
Match: KGN57854.1 (hypothetical protein Csa_3G354480 [Cucumis sativus])

HSP 1 Score: 116.3 bits (290), Expect = 1.1e-22
Identity = 57/58 (98.28%), Postives = 58/58 (100.00%), Query Frame = 0 

Query: 6  RNLRIFIFHKPRHRHHSDEKRHIAIRKVLILKDKGLRRLLLLGTFIDTDIKDLENDGA 64
          +NLRIFIFHKPRHRHHSDEKRHIAIRKVLILKDKGLRRLLLLGTFIDTDIKDLENDGA
Sbjct: 19 QNLRIFIFHKPRHRHHSDEKRHIAIRKVLILKDKGLRRLLLLGTFIDTDIKDLENDGA 76

[Close]
BLAST of CsaV3_3G022010 vs. TrEMBL
Match: tr|A0A0A0LA54|A0A0A0LA54_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G354480 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 7.1e-23
Identity = 57/58 (98.28%), Postives = 58/58 (100.00%), Query Frame = 0 

Query: 6  RNLRIFIFHKPRHRHHSDEKRHIAIRKVLILKDKGLRRLLLLGTFIDTDIKDLENDGA 64
          +NLRIFIFHKPRHRHHSDEKRHIAIRKVLILKDKGLRRLLLLGTFIDTDIKDLENDGA
Sbjct: 19 QNLRIFIFHKPRHRHHSDEKRHIAIRKVLILKDKGLRRLLLLGTFIDTDIKDLENDGA 76

The following BLAST results are available for this feature:
BLAST of CsaV3_3G022010 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57854.11.1e-2298.28hypothetical protein Csa_3G354480 [Cucumis sativus][more]
BLAST of CsaV3_3G022010 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G022010 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G022010 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LA54|A0A0A0LA54_CUCSA7.1e-2398.28Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G354480 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G022010.1CsaV3_3G022010.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G022010CSPI03G21960Wild cucumber (PI 183967)cpicucB153
CsaV3_3G022010Cucsa.012970Cucumber (Gy14) v1cgycucB303
CsaV3_3G022010CsGy3G021330Cucumber (Gy14) v2cgybcucB117
CsaV3_3G022010ClCG05G008750Watermelon (Charleston Gray)cucwcgB227
CsaV3_3G022010MELO3C031860.2Melon (DHL92) v3.6.1cucmedB252
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G022010Silver-seed gourdcarcucB0575
CsaV3_3G022010Silver-seed gourdcarcucB1033
CsaV3_3G022010Cucurbita maxima (Rimu)cmacucB0384
CsaV3_3G022010Cucurbita maxima (Rimu)cmacucB0488
CsaV3_3G022010Cucurbita moschata (Rifu)cmocucB0381
CsaV3_3G022010Cucurbita moschata (Rifu)cmocucB0477
CsaV3_3G022010Cucurbita pepo (Zucchini)cpecucB0040
CsaV3_3G022010Cucurbita pepo (Zucchini)cpecucB0259
CsaV3_3G022010Wild cucumber (PI 183967)cpicucB144
CsaV3_3G022010Bottle gourd (USVL1VR-Ls)cuclsiB221
CsaV3_3G022010Melon (DHL92) v3.5.1cucmeB239
CsaV3_3G022010Melon (DHL92) v3.5.1cucmeB255
CsaV3_3G022010Melon (DHL92) v3.6.1cucmedB238
CsaV3_3G022010Watermelon (97103) v1cucwmB241
CsaV3_3G022010Watermelon (97103) v2cucwmbB208
CsaV3_3G022010Wax gourdcucwgoB278