CsaV3_3G021050 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G021050
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	TATA-binding protein-associated factor like
Location	chr3 : 17603244 .. 17605780 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTGCTTTCACGCATTCTCCCTGCGTGTAAAGCAGGGCCTTGAGGACCCTGATGATGATGTCCAGGCTGTTGCAGCAGATGCTTTAATACCGGCTGCTGATTCTATTGTTTCTCTCAAGGGTCCGACCTTGCATTCAATTGTGATGTTGCTCTGGGATATCCTGCTTGATTTGGATGATCTAAGTCCTTCCACCAGCAGGTAATGTTTAGATATAACCCCATGTTTGTCTTGGCAGAATTCATCTGAGTAAATCATGTTTGATGTTTTTCTGTTTGTTTAAAGCCTTTAGGTATTTGTCTTTAGTGAGGATTTATCTTAAGTTTTCATGTAATGGCTGTAGTTTATTTCTAAACCGTAAGCTTTGTGATTTGTCTATAAGTAGGCTTGTTTCCCCAATTGTTACTCATTAATAAAATTTCCGAGTCTAGATTTTTTCCAAGAAAATCAGCTTCATTAATGCTACTCTTGACCTCATATTTGATCTATTAGAAATCATTTGCTTCAGTGACAAAAGAGAGAAAAATGATGACTAATCGTGCAATTAGAGGTCTCCTGTTTAACTTTCCTGCTGCCATCTTTTGTACTTTTTGATTAATAGGATTTTATTTGGAAAAAAAAAGGAGAAATGATTGGTTTTCTTTTCGTGTTGTATTACTCGTTCATCTTGTTCAAATTTGAGAGTTTTGGTCACTATGGTGAGATATTGGAGGAGGGAGAGACTTGAGGGATTTATTCATTTTGTTTATTATTTTTTTGGGGAAAGGAAACAAACTCTTACAGAAAACACCAATAATGTCAAATCTTGTTTACAACACAAAATATTGACAAGGAGTCGTACTCGTACTACATTGTTTTTACAATTACATAGGAGCACATTGTTTTTCCTATGCCACATCAGGGTTCAAATTCAATGGGAATTTGTACCGGACCGCACTCACACAGAACACTGAGAAGTAGAACAATCCAAGTATTATCTATTCAACATTCATTTCTAATCATCTAGGGCTGGATTCCTGTACATCATACCCATCTGATTATCATTGGCACCATCTCACTATCTCTTTGTAATGATTACCTATTCTTTTTAAAAAATAAATTATTATTACTTTTAATCTTTTGAATTCTTTCACCTCCCAACTTCTGTCGTGGACCATTAAACTCCATCTCCATCTCTTTTCTTTCTTTCTTTCTACAACCATTTTTTCTGTAGAGAGCTCAAGGCCGCTGCCACTAGCTGACGCCACTGTTGCAACCACCGCCTTCTATTCTCTTTCTTCCTTCCTTTTTTTTGTCTCCCTTTTGCTTTGCTTCTCCATTATCTTTTTCTTAACATCCTTTCTTCTCCATTTCTCCTTTCCCTTTTATTTCTGCGTTTCTTCTTCCTTTAGGAATGTAGTTTTAGTTTTAGTTTTTTTGTTATTATTTTTTTCACTTCACTACATTCACAAAACTGACTGACTGTTGGGCATAGTCGGTTGGTCGGTGTACCTTACCCTTCCAAAACTGTCGACAATCGATTAGTCAATGTTGGCTTTGGTCTGAGTTCAAAGCCAATGCCAATGGATCAACAAACTCCTTGATGGATTGTTTAGGAGAAGCAACTTAGCTAAGGATTTTTGTGGGTGCATGACATACTGGCTATATTGTGGGTAATTTGGAGGAACAATGTACGATTAACTTTTGAAGTCAAGTTATGAAGATTCTTTTTCATTGTGGAAATTGGTCAGGTTCTTGGGCAATCTTTTTTCTAATTCTTGTAACGAATCATTTCCAATTTTCACGACACATTAGTTTTCCACCTGAATTTTTTTTTCCCTGACACTTTACAGTAGAATCAACACCTATCCAACTTTTAAGTTTTAACTTCTTGGTCTTTGCTTTCTCATTATGTGCTATACTTGTCACTGTCGTTGATTTGGTTGTTGGCTAGGATTATGATAATAGTGGTCAATGGTACAAGTTGAAAATGTGAAAATGAAATTGTTGGATACTATAGTATTAAATTTACTTTTACCTATCAATTTAAGTTTTTGGGTCAATCAGTGATTTAAGATGATATTAGAGTAGATGATCGAAGAGATCTTGTGTTCAGACCTTCCAATGTTATTTCCCTCCAGTTAATATTGATTTTCATTTGTTGGGTTTTCTACCTATTTCAAGCCAACAAGTGAGAGGAGTTAGATGATATAATATTAAATTTATCTTCACCCATCAGCTTAAGCATTTTGGGTCGATCAGTAATTTAAGATGATTGGTTTCAATATGACTCAATGCAATCTTTTTTTGAAAATCCATTTATAAACTTGGACGCTCTAATTTATCCATTTCATCCTCATCACAAATTGTCTCATGGCTTTCCAATTATGCAGTGTAATGAATCTATTAGCGGAAATCTATTCCCAGAAAGAGATGTTTCCAAACATGTTTGAGGTGTTAACCTTAAGAGAGACCCAAGAGTACGATCTAAATGAAGCTATTCGCGTGCATGATACCCAGAGGGCATATGTCTACAAGAAAACCCATATGCATTAA

mRNA sequence

ATGATTTGCTTTCACGCATTCTCCCTGCGTGTAAAGCAGGGCCTTGAGGACCCTGATGATGATGTCCAGGCTGTTGCAGCAGATGCTTTAATACCGGCTGCTGATTCTATTGTTTCTCTCAAGGGTCCGACCTTGCATTCAATTGTGATGTTGCTCTGGGATATCCTGCTTGATTTGGATGATCTAAGTCCTTCCACCAGCAGTGTAATGAATCTATTAGCGGAAATCTATTCCCAGAAAGAGATGTTTCCAAACATGTTTGAGGTGTTAACCTTAAGAGAGACCCAAGAGTACGATCTAAATGAAGCTATTCGCGTGCATGATACCCAGAGGGCATATGTCTACAAGAAAACCCATATGCATTAA

Coding sequence (CDS)

ATGATTTGCTTTCACGCATTCTCCCTGCGTGTAAAGCAGGGCCTTGAGGACCCTGATGATGATGTCCAGGCTGTTGCAGCAGATGCTTTAATACCGGCTGCTGATTCTATTGTTTCTCTCAAGGGTCCGACCTTGCATTCAATTGTGATGTTGCTCTGGGATATCCTGCTTGATTTGGATGATCTAAGTCCTTCCACCAGCAGTGTAATGAATCTATTAGCGGAAATCTATTCCCAGAAAGAGATGTTTCCAAACATGTTTGAGGTGTTAACCTTAAGAGAGACCCAAGAGTACGATCTAAATGAAGCTATTCGCGTGCATGATACCCAGAGGGCATATGTCTACAAGAAAACCCATATGCATTAA

Protein sequence

MICFHAFSLRVKQGLEDPDDDVQAVAADALIPAADSIVSLKGPTLHSIVMLLWDILLDLDDLSPSTSSVMNLLAEIYSQKEMFPNMFEVLTLRETQEYDLNEAIRVHDTQRAYVYKKTHMH

Homology

[Close]

BLAST of CsaV3_3G021050 vs. NCBI nr
Match: KGN57795.1 (hypothetical protein Csa_3G305660 [Cucumis sativus])

HSP 1 Score: 187.6 bits (475), Expect = 2.6e-44
Identity = 97/98 (98.98%), Postives = 97/98 (98.98%), Query Frame = 0


Query: 12  KQGLEDPDDDVQAVAADALIPAADSIVSLKGPTLHSIVMLLWDILLDLDDLSPSTSSVMN 71
           K GLEDPDDDVQAVAADALIPAADSIVSLKGPTLHSIVMLLWDILLDLDDLSPSTSSVMN
Sbjct: 27  KAGLEDPDDDVQAVAADALIPAADSIVSLKGPTLHSIVMLLWDILLDLDDLSPSTSSVMN 86

Query: 72  LLAEIYSQKEMFPNMFEVLTLRETQEYDLNEAIRVHDT 110
           LLAEIYSQKEMFPNMFEVLTLRETQEYDLNEAIRVHDT
Sbjct: 87  LLAEIYSQKEMFPNMFEVLTLRETQEYDLNEAIRVHDT 124

[Close]

BLAST of CsaV3_3G021050 vs. NCBI nr
Match: XP_011651396.1 (PREDICTED: TATA-binding protein-associated factor BTAF1 [Cucumis sativus])

HSP 1 Score: 187.6 bits (475), Expect = 2.6e-44
Identity = 97/98 (98.98%), Postives = 97/98 (98.98%), Query Frame = 0


Query: 12  KQGLEDPDDDVQAVAADALIPAADSIVSLKGPTLHSIVMLLWDILLDLDDLSPSTSSVMN 71
           K GLEDPDDDVQAVAADALIPAADSIVSLKGPTLHSIVMLLWDILLDLDDLSPSTSSVMN
Sbjct: 592 KAGLEDPDDDVQAVAADALIPAADSIVSLKGPTLHSIVMLLWDILLDLDDLSPSTSSVMN 651

Query: 72  LLAEIYSQKEMFPNMFEVLTLRETQEYDLNEAIRVHDT 110
           LLAEIYSQKEMFPNMFEVLTLRETQEYDLNEAIRVHDT
Sbjct: 652 LLAEIYSQKEMFPNMFEVLTLRETQEYDLNEAIRVHDT 689

[Close]

BLAST of CsaV3_3G021050 vs. NCBI nr
Match: XP_008457028.1 (PREDICTED: TATA-binding protein-associated factor BTAF1 [Cucumis melo])

HSP 1 Score: 180.6 bits (457), Expect = 3.1e-42
Identity = 94/98 (95.92%), Postives = 94/98 (95.92%), Query Frame = 0


Query: 12  KQGLEDPDDDVQAVAADALIPAADSIVSLKGPTLHSIVMLLWDILLDLDDLSPSTSSVMN 71
           K GLEDPDDDVQAVAADALIPAA SIVSLKGPTLHSIVMLLWDILLDLDDLSPSTSSVMN
Sbjct: 592 KAGLEDPDDDVQAVAADALIPAAASIVSLKGPTLHSIVMLLWDILLDLDDLSPSTSSVMN 651

Query: 72  LLAEIYSQKEMFPNMFEVLTLRETQEYDLNEAIRVHDT 110
           LLAEIYSQ EMFPNMFE LTLRETQEYDLNEAIRVHDT
Sbjct: 652 LLAEIYSQTEMFPNMFEALTLRETQEYDLNEAIRVHDT 689

[Close]

BLAST of CsaV3_3G021050 vs. NCBI nr
Match: XP_023528568.1 (TATA-binding protein-associated factor BTAF1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 165.6 bits (418), Expect = 1.0e-37
Identity = 87/97 (89.69%), Postives = 88/97 (90.72%), Query Frame = 0


Query: 12  KQGLEDPDDDVQAVAADALIPAADSIVSLKGPTLHSIVMLLWDILLDLDDLSPSTSSVMN 71
           K GLEDPDDDVQAVAADALIPAA SIVSLKG TLH IVMLLWDILLDLDDLSPSTSSVMN
Sbjct: 592 KAGLEDPDDDVQAVAADALIPAASSIVSLKGQTLHLIVMLLWDILLDLDDLSPSTSSVMN 651

Query: 72  LLAEIYSQKEMFPNMFEVLTLRETQEYDLNEAIRVHD 109
           LLAEIYSQKEM P MFE LTLRETQE+DLN AI VHD
Sbjct: 652 LLAEIYSQKEMIPKMFEALTLRETQEFDLNGAIHVHD 688

[Close]

BLAST of CsaV3_3G021050 vs. NCBI nr
Match: XP_022143374.1 (TATA-binding protein-associated factor BTAF1 [Momordica charantia])

HSP 1 Score: 164.9 bits (416), Expect = 1.8e-37
Identity = 85/98 (86.73%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 12  KQGLEDPDDDVQAVAADALIPAADSIVSLKGPTLHSIVMLLWDILLDLDDLSPSTSSVMN 71
           K GLEDPDDDVQAVAADALIPAA SIV+LKG TLH+IVMLLWDILLDLDDLSPSTSSVMN
Sbjct: 592 KAGLEDPDDDVQAVAADALIPAAASIVALKGQTLHTIVMLLWDILLDLDDLSPSTSSVMN 651

Query: 72  LLAEIYSQKEMFPNMFEVLTLRETQEYDLNEAIRVHDT 110
           LLAEIYSQ+EM P MFE LTLRETQEYDLNE + V+DT
Sbjct: 652 LLAEIYSQEEMIPKMFEALTLRETQEYDLNEVVHVNDT 689

[Close]

BLAST of CsaV3_3G021050 vs. TAIR10
Match: AT3G54280.2 (DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP binding;DNA binding;helicases)

HSP 1 Score: 122.5 bits (306), Expect = 1.8e-28
Identity = 68/91 (74.73%), Postives = 76/91 (83.52%), Query Frame = 0


Query: 12  KQGLEDPDDDVQAVAADALIPAADSIVSLKGPTLHSIVMLLWDILLDLDDLSPSTSSVMN 71
           K GLED DDDV+AVAADALIPAA +IVSL+G TL SIVMLLWDILL+LDDLSPSTSS+MN
Sbjct: 625 KAGLEDSDDDVRAVAADALIPAAAAIVSLRGQTLLSIVMLLWDILLELDDLSPSTSSIMN 684

Query: 72  LLAEIYSQKEMFPNMFEVLTLRETQEYDLNE 103
           LLAEIYSQ +M   M E L+L E Q  +LNE
Sbjct: 685 LLAEIYSQDDMTLVMHEELSLGEEQNIELNE 715

[Close]

BLAST of CsaV3_3G021050 vs. Swiss-Prot
Match: sp|B5BT18|BTAF1_ARATH (TATA-binding protein-associated factor BTAF1 OS=Arabidopsis thaliana OX=3702 GN=BTAF1 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.3e-27
Identity = 68/91 (74.73%), Postives = 76/91 (83.52%), Query Frame = 0


Query: 12  KQGLEDPDDDVQAVAADALIPAADSIVSLKGPTLHSIVMLLWDILLDLDDLSPSTSSVMN 71
           K GLED DDDV+AVAADALIPAA +IVSL+G TL SIVMLLWDILL+LDDLSPSTSS+MN
Sbjct: 594 KAGLEDSDDDVRAVAADALIPAAAAIVSLRGQTLLSIVMLLWDILLELDDLSPSTSSIMN 653

Query: 72  LLAEIYSQKEMFPNMFEVLTLRETQEYDLNE 103
           LLAEIYSQ +M   M E L+L E Q  +LNE
Sbjct: 654 LLAEIYSQDDMTLVMHEELSLGEEQNIELNE 684

[Close]

BLAST of CsaV3_3G021050 vs. Swiss-Prot
Match: sp|O14981|BTAF1_HUMAN (TATA-binding protein-associated factor 172 OS=Homo sapiens OX=9606 GN=BTAF1 PE=1 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 1.3e-10
Identity = 33/73 (45.21%), Postives = 53/73 (72.60%), Query Frame = 0


Query: 10  RVKQGLEDPDDDVQAVAADALIPAADSIVSLKGPTLHSIVMLLWDILLDLDDLSPSTSSV 69
           R+ +GL+D DDDV+AVAA +L+P  +S+V L+   +  I+  LWD LL+LDDL+ ST+S+
Sbjct: 434 RIIEGLQDLDDDVRAVAAASLVPVVESLVYLQTQKVPFIINTLWDALLELDDLTASTNSI 493

Query: 70  MNLLAEIYSQKEM 83
           M LL+ + +  ++
Sbjct: 494 MTLLSSLLTYPQV 506

[Close]

BLAST of CsaV3_3G021050 vs. Swiss-Prot
Match: sp|O43065|MOT1_SCHPO (Probable helicase mot1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mot1 PE=1 SV=4)

HSP 1 Score: 56.2 bits (134), Expect = 2.9e-07
Identity = 36/79 (45.57%), Postives = 51/79 (64.56%), Query Frame = 0


Query: 11  VKQGLEDPDDDVQAVAADALIPAADSIVSLKGPTLHSIVMLLWDILLDL-DDLSPSTSSV 70
           V  GL + DDDV+AV+A  L+P AD +V  K  +  +++ +LWD L D+ DDLS STS V
Sbjct: 523 VIHGLANHDDDVRAVSALTLLPIADKLVQEKLSSCKNLLKVLWDCLDDVKDDLSSSTSCV 582

Query: 71  MNLLAEIYSQKEMFPNMFE 89
           M+LL+ + S  E+   M E
Sbjct: 583 MDLLSSLCSFTEVMNLMQE 601

[Close]

BLAST of CsaV3_3G021050 vs. Swiss-Prot
Match: sp|P32333|MOT1_YEAST (TATA-binding protein-associated factor MOT1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MOT1 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.1e-06
Identity = 30/73 (41.10%), Postives = 42/73 (57.53%), Query Frame = 0


Query: 11  VKQGLEDPDDDVQAVAADALIPAADSIVSLKGPTLHSIVMLLWDILLDL-DDLSPSTSSV 70
           V  GL   DDDVQ+VAA  L P     V L   T+  +V  +W +L  L DD+S S  S+
Sbjct: 454 VLYGLNQSDDDVQSVAASILTPITSEFVKLNNSTIEILVTTIWSLLARLDDDISSSVGSI 513

Query: 71  MNLLAEIYSQKEM 83
           M+LLA++   +E+
Sbjct: 514 MDLLAKLCDHQEV 526

[Close]

BLAST of CsaV3_3G021050 vs. TrEMBL
Match: tr|A0A0A0L730|A0A0A0L730_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G305660 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.7e-44
Identity = 97/98 (98.98%), Postives = 97/98 (98.98%), Query Frame = 0


Query: 12  KQGLEDPDDDVQAVAADALIPAADSIVSLKGPTLHSIVMLLWDILLDLDDLSPSTSSVMN 71
           K GLEDPDDDVQAVAADALIPAADSIVSLKGPTLHSIVMLLWDILLDLDDLSPSTSSVMN
Sbjct: 27  KAGLEDPDDDVQAVAADALIPAADSIVSLKGPTLHSIVMLLWDILLDLDDLSPSTSSVMN 86

Query: 72  LLAEIYSQKEMFPNMFEVLTLRETQEYDLNEAIRVHDT 110
           LLAEIYSQKEMFPNMFEVLTLRETQEYDLNEAIRVHDT
Sbjct: 87  LLAEIYSQKEMFPNMFEVLTLRETQEYDLNEAIRVHDT 124

[Close]

BLAST of CsaV3_3G021050 vs. TrEMBL
Match: tr|A0A1S3C457|A0A1S3C457_CUCME (TATA-binding protein-associated factor BTAF1 OS=Cucumis melo OX=3656 GN=LOC103496808 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 2.1e-42
Identity = 94/98 (95.92%), Postives = 94/98 (95.92%), Query Frame = 0


Query: 12  KQGLEDPDDDVQAVAADALIPAADSIVSLKGPTLHSIVMLLWDILLDLDDLSPSTSSVMN 71
           K GLEDPDDDVQAVAADALIPAA SIVSLKGPTLHSIVMLLWDILLDLDDLSPSTSSVMN
Sbjct: 592 KAGLEDPDDDVQAVAADALIPAAASIVSLKGPTLHSIVMLLWDILLDLDDLSPSTSSVMN 651

Query: 72  LLAEIYSQKEMFPNMFEVLTLRETQEYDLNEAIRVHDT 110
           LLAEIYSQ EMFPNMFE LTLRETQEYDLNEAIRVHDT
Sbjct: 652 LLAEIYSQTEMFPNMFEALTLRETQEYDLNEAIRVHDT 689

[Close]

BLAST of CsaV3_3G021050 vs. TrEMBL
Match: tr|A0A2P6QNS6|A0A2P6QNS6_ROSCH (Putative DNA helicase chromatin remodeling SNF2 family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0084181 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.5e-32
Identity = 75/103 (72.82%), Postives = 87/103 (84.47%), Query Frame = 0


Query: 12  KQGLEDPDDDVQAVAADALIPAADSIVSLKGPTLHSIVMLLWDILLDLDDLSPSTSSVMN 71
           K GLEDPDDDV+AVAADALIP A +IV+LKG TLHS+VMLLWDILLDLDDLSPSTSSVMN
Sbjct: 585 KAGLEDPDDDVRAVAADALIPTASAIVALKGQTLHSVVMLLWDILLDLDDLSPSTSSVMN 644

Query: 72  LLAEIYSQKEMFPNMFEVLTLRETQEYDLNEAIRVHDTQRAYV 115
           LLAEIYSQ+EM P +FE L+L+E  E+DLNE  R+ D +   +
Sbjct: 645 LLAEIYSQEEMIPKIFEPLSLKENLEFDLNELGRIDDAREGII 687

[Close]

BLAST of CsaV3_3G021050 vs. TrEMBL
Match: tr|M5WK27|M5WK27_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa000203mg PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.3e-32
Identity = 76/98 (77.55%), Postives = 84/98 (85.71%), Query Frame = 0


Query: 12  KQGLEDPDDDVQAVAADALIPAADSIVSLKGPTLHSIVMLLWDILLDLDDLSPSTSSVMN 71
           K GLEDPDDDV+AVAADALIP A +IV+L G TLHSIVMLLWDILLDLDDLSPSTSSVMN
Sbjct: 14  KAGLEDPDDDVRAVAADALIPTAAAIVALNGQTLHSIVMLLWDILLDLDDLSPSTSSVMN 73

Query: 72  LLAEIYSQKEMFPNMFEVLTLRETQEYDLNEAIRVHDT 110
           LLAEIYSQ+EM P +FE LTL+E  E+DLNE   + DT
Sbjct: 74  LLAEIYSQEEMIPKIFEALTLKENLEFDLNELGSIDDT 111

[Close]

BLAST of CsaV3_3G021050 vs. TrEMBL
Match: tr|A0A251NHY2|A0A251NHY2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G000100 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.3e-32
Identity = 76/98 (77.55%), Postives = 84/98 (85.71%), Query Frame = 0


Query: 12  KQGLEDPDDDVQAVAADALIPAADSIVSLKGPTLHSIVMLLWDILLDLDDLSPSTSSVMN 71
           K GLEDPDDDV+AVAADALIP A +IV+L G TLHSIVMLLWDILLDLDDLSPSTSSVMN
Sbjct: 594 KAGLEDPDDDVRAVAADALIPTAAAIVALNGQTLHSIVMLLWDILLDLDDLSPSTSSVMN 653

Query: 72  LLAEIYSQKEMFPNMFEVLTLRETQEYDLNEAIRVHDT 110
           LLAEIYSQ+EM P +FE LTL+E  E+DLNE   + DT
Sbjct: 654 LLAEIYSQEEMIPKIFEALTLKENLEFDLNELGSIDDT 691

The following BLAST results are available for this feature:

BLAST of CsaV3_3G021050 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN57795.1	2.6e-44	98.98	hypothetical protein Csa_3G305660 [Cucumis sativus]	[more]
XP_011651396.1	2.6e-44	98.98	PREDICTED: TATA-binding protein-associated factor BTAF1 [Cucumis sativus]	[more]
XP_008457028.1	3.1e-42	95.92	PREDICTED: TATA-binding protein-associated factor BTAF1 [Cucumis melo]	[more]
XP_023528568.1	1.0e-37	89.69	TATA-binding protein-associated factor BTAF1 [Cucurbita pepo subsp. pepo]	[more]
XP_022143374.1	1.8e-37	86.73	TATA-binding protein-associated factor BTAF1 [Momordica charantia]	[more]

BLAST of CsaV3_3G021050 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G54280.2	1.8e-28	74.73	DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP binding;DNA b...	[more]

BLAST of CsaV3_3G021050 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|B5BT18\|BTAF1_ARATH	3.3e-27	74.73	TATA-binding protein-associated factor BTAF1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
sp\|O14981\|BTAF1_HUMAN	1.3e-10	45.21	TATA-binding protein-associated factor 172 OS=Homo sapiens OX=9606 GN=BTAF1 PE=1...	[more]
sp\|O43065\|MOT1_SCHPO	2.9e-07	45.57	Probable helicase mot1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX...	[more]
sp\|P32333\|MOT1_YEAST	1.1e-06	41.10	TATA-binding protein-associated factor MOT1 OS=Saccharomyces cerevisiae (strain ...	[more]

BLAST of CsaV3_3G021050 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L730\|A0A0A0L730_CUCSA	1.7e-44	98.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G305660 PE=4 SV=1	[more]
tr\|A0A1S3C457\|A0A1S3C457_CUCME	2.1e-42	95.92	TATA-binding protein-associated factor BTAF1 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
tr\|A0A2P6QNS6\|A0A2P6QNS6_ROSCH	1.5e-32	72.82	Putative DNA helicase chromatin remodeling SNF2 family OS=Rosa chinensis OX=7464...	[more]
tr\|M5WK27\|M5WK27_PRUPE	4.3e-32	77.55	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa000203mg PE=4 SV=1	[more]
tr\|A0A251NHY2\|A0A251NHY2_PRUPE	4.3e-32	77.55	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G000100 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005524	ATP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G021050.1	CsaV3_3G021050.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36498	FAMILY NOT NAMED	coord: 6..81

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_3G021050	CSPI03G21270	Wild cucumber (PI 183967)	cpicucB144
CsaV3_3G021050	Cla013209	Watermelon (97103) v1	cucwmB254
CsaV3_3G021050	MELO3C020234	Melon (DHL92) v3.5.1	cucmeB249

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_3G021050	Silver-seed gourd	carcucB0544
CsaV3_3G021050	Silver-seed gourd	carcucB0801
CsaV3_3G021050	Cucumber (Gy14) v2	cgybcucB117
CsaV3_3G021050	Cucumber (Gy14) v1	cgycucB569
CsaV3_3G021050	Cucurbita maxima (Rimu)	cmacucB0281
CsaV3_3G021050	Cucurbita maxima (Rimu)	cmacucB0547
CsaV3_3G021050	Cucurbita moschata (Rifu)	cmocucB0272
CsaV3_3G021050	Cucurbita moschata (Rifu)	cmocucB0532
CsaV3_3G021050	Cucurbita pepo (Zucchini)	cpecucB0686
CsaV3_3G021050	Cucurbita pepo (Zucchini)	cpecucB0749
CsaV3_3G021050	Bottle gourd (USVL1VR-Ls)	cuclsiB231
CsaV3_3G021050	Melon (DHL92) v3.6.1	cucmedB247
CsaV3_3G021050	Watermelon (Charleston Gray)	cucwcgB241
CsaV3_3G021050	Watermelon (97103) v2	cucwmbB220
CsaV3_3G021050	Wax gourd	cucwgoB274