CsaV3_3G020590 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G020590
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3 : 16695139 .. 16697726 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTATTTTATATTGAAAAAATATTCTCCTATTTCACTTTATTTTGTACTAAAATTTTTAGAATATATAATAGATCTATTTTGTTAAAATTTCTATTATCTTACCAACACTCTTAAACATTGCTTTCTATTGATCGTCAACAAAAGTTTTACTTAAAGTGACATTTATTTGTACCCAATTGAGAAATGGGCCCAATTCGGGTATCCCACACGGAAAACATTCTGTCTTTTATTGTCAGGGCTTGTTCCTATACAACAAATAAAAAGAAAAAGGCAGGCAAATTTCCCTATTCACAAATCCATTGAAAAAAAATAAAGGTGAGATGATATTGACTGGCTTGTAATATGATAAGATTCAATGGGTTTAAAAATTGAAGTTTTCTTGCAAAAGAAATGTTCATTTGAGAGAAAATTGTTCATGATTTTGTCGAAGTCTACGTCTTTGATTTTGTAAAACCCATTTTCGTACTAGATGTAGTAGAAAGATTTGACCACTTTGCAAATCTCCACTTCCACTTTCTGTTTGAGTGTGACTGTAGAACTTGTTGGAAATTGGCTGAAGAAGATTCTTAAAAGAACAGTGGAAGGACGGAGCGAGAAGAGAGAGAAGGGAGATACAACAAACCTCCTTTCTGGGTGTGTAAATTCTCAACCAAATCTGTTTAATTCAAAGAACCATGTTTCATACCCAAATTACAATGAGTTTTAATCCTATTTTAAGCTACAAAACTTACCTTAGCCACTCATGACGTGCTGAGATGACTGTCACACCCTTCAAATTCACCTACTTAAATTGAGATGAGATGCAACTAGCAAGAGAAGTGTCAACAAGGTGACACTCCACACCAAGAACGCAACTTGAATGATTCAAGGCATAATTTTCCTACTCCCTGCTTAGCTTATCACTTAGATGCTTTTAGCACATTTGAAAATTTAAGTTGAATGCTAAAAATGCTCAATGTGATGGATAACAATGAATGCACAAAAACTTCTCATTTTATTTACTCAAACACCCGTTTCAACTCTACAACTTGACACTAAATTTTAACTTATTACAATACGGTTGCTTCTTGTCATTCGTCAGCTTACCTCTACCCCTACAAGTTATGCTAGGTGTTTGTTAACTTTCTATTAGAGTTCGGTAAAAAAGTACCGCATAACTATAATGCTCCCGAATACACGTTATTAAGTGATCCCGTAGAAACACATTTGGGCTCTTGGTGAACACGAAGGAAACATCCTAAGAGAGTCGGGCTGACTCTGTCGAATCACTCATAAAATCTAGCCACACATGCATAAGTAGGTGGTGATTTCGAGAGACACCCATATGGTACGACTCTAACCGACAAAGTTAATAGAACAACATAGCCTATACATGTAGCATATCATAAATATCATATCTCATCATAATGTATCTCAATCATTGGATATCTCAATCATAACATATCTTATTAATAAGATATCATGGTCATCACATATCCCAGTCGTGTGTATCTCGGTGTCTATGTAGTCATCAATATCAGTCATCCCTAATAGTCACATCATGCATCATAGTTACGATAATGCATAATAAGGTAAAACATACATGCCCGGCCTTTATTCTAATGCTGGGTCAAAATAATCCTGCAATCAAAGCAGGTCCTAAATAGTAAAAGAAACTAAAATTAATAAAATTATCGATTGGTTATTGAACCCAAAATCAACTCAATTCAACTTACCCAAAGTTGAGGTTGAATTCCCGTTCAACCATGGTTAAGGAGAAATTCGTGGAAGTTAATTCTTTTAATTTAGCCTATTACCCTTCAAGCAAAAAAAATCCAAATCAACTTAATTAAGGTCCAAAAATATAACAATTGACGTGTATATCTGACACCATCAAAACTCACCCCGAATGGCTCAATATAGGTGAAGAGTGGGCAAAATGGTGCAAAGTAGCTCGACTTGTTCGGATGGCTCAACCTGGATGGAAGGATGGCTCAGATGGTGGCTCAGACGTGAGAAGATCGACTCGAGTGAAGAAAGAATGGAGACTCTTCGGCTTCACGATGGCGGAGAGTCGCGGCGAAGATCCACACGTTGGATCGAAGGAAACTTGGCTGGAGGCTTCGCTGGGTGGAATGCGACGGCGGAAGAAAGATGGAGCTTAGCGGCGACAGTGGCGCACAACGGCTCGCGAGCCAAAGATGAACGCGCGAAGACTAGCTTCGTTTGTGCTTGGACGGTGGTGAACATAGTCTGTGGTGGTGCGACCTTTAATGGAGATCGGTGAACGGAGAAGAAAAGGGCGACAACTAGGTTTTCAAGAGAAGGAAGATCATATAGTTTCCTTCTTTTGTTTGCACTAGTAGGGGTGAAATCCGGTTGGGTTGATAGACATTCTCAACTCAACCCATATTTTCGGGTTATTTTGGTTGGCAACCAACTCGAATAATCTGATTTCCAACCAAACCGGTTGTATTTGTTTTTTTTTTCCTTCTCTTGTTTCTAGTTACATTTAAATTGGATTGTATAAGCTTGTTACATTTAAATCGGGTTGTATAAGTTTGTTACATTTAAATCGGGTTATATAAGTTTGTTACATTTAAATTTC

mRNA sequence

ATGGTGCAAAGTAGCTCGACTTGTTCGGATGGCTCAACCTGGATGGAAGGATGGCTCAGATGGTGGCTCAGACGTGAGAAGATCGACTCGAGTGAAGAAAGAATGGAGACTCTTCGGCTTCACGATGGCGGAGAGTCGCGGCGAAGATCCACACGTTGGATCGAAGGAAACTTGGCTGGAGGCTTCGCTGGGTGGAATGCGACGGCGGAAGAAAGATGGAGCTTAGCGGCGACAGTGGCGCACAACGGCTCGCGAGCCAAAGATGAACGCGCGAAGACTAGCTTCGTTTGTGCTTGGACGGTGGTGAACATAGTCTGTGGTGGTGCGACCTTTAATGGAGATCGGTGA

Coding sequence (CDS)

ATGGTGCAAAGTAGCTCGACTTGTTCGGATGGCTCAACCTGGATGGAAGGATGGCTCAGATGGTGGCTCAGACGTGAGAAGATCGACTCGAGTGAAGAAAGAATGGAGACTCTTCGGCTTCACGATGGCGGAGAGTCGCGGCGAAGATCCACACGTTGGATCGAAGGAAACTTGGCTGGAGGCTTCGCTGGGTGGAATGCGACGGCGGAAGAAAGATGGAGCTTAGCGGCGACAGTGGCGCACAACGGCTCGCGAGCCAAAGATGAACGCGCGAAGACTAGCTTCGTTTGTGCTTGGACGGTGGTGAACATAGTCTGTGGTGGTGCGACCTTTAATGGAGATCGGTGA

Protein sequence

MVQSSSTCSDGSTWMEGWLRWWLRREKIDSSEERMETLRLHDGGESRRRSTRWIEGNLAGGFAGWNATAEERWSLAATVAHNGSRAKDERAKTSFVCAWTVVNIVCGGATFNGDR
Homology
[Close]
BLAST of CsaV3_3G020590 vs. NCBI nr
Match: KGN57746.1 (hypothetical protein Csa_3G271390 [Cucumis sativus])

HSP 1 Score: 244.2 bits (622), Expect = 2.2e-61
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0 

Query: 1   MVQSSSTCSDGSTWMEGWLRWWLRREKIDSSEERMETLRLHDGGESRRRSTRWIEGNLAG 60
           MVQSSSTCSDGSTWMEGWLRWWLRREKIDSSEERMETLRLHDGGESRRRSTRWIEGNLAG
Sbjct: 1   MVQSSSTCSDGSTWMEGWLRWWLRREKIDSSEERMETLRLHDGGESRRRSTRWIEGNLAG 60

Query: 61  GFAGWNATAEERWSLAATVAHNGSRAKDERAKTSFVCAWTVVNIVCGGATFNGDR 116
           GFAGWNATAEERWSLAATVAHNGSRAKDERAKTSFVCAWTVVNIVCGGATFNGDR
Sbjct: 61  GFAGWNATAEERWSLAATVAHNGSRAKDERAKTSFVCAWTVVNIVCGGATFNGDR 115

[Close]
BLAST of CsaV3_3G020590 vs. TrEMBL
Match: tr|A0A0A0LCG0|A0A0A0LCG0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G271390 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.4e-61
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0 

Query: 1   MVQSSSTCSDGSTWMEGWLRWWLRREKIDSSEERMETLRLHDGGESRRRSTRWIEGNLAG 60
           MVQSSSTCSDGSTWMEGWLRWWLRREKIDSSEERMETLRLHDGGESRRRSTRWIEGNLAG
Sbjct: 1   MVQSSSTCSDGSTWMEGWLRWWLRREKIDSSEERMETLRLHDGGESRRRSTRWIEGNLAG 60

Query: 61  GFAGWNATAEERWSLAATVAHNGSRAKDERAKTSFVCAWTVVNIVCGGATFNGDR 116
           GFAGWNATAEERWSLAATVAHNGSRAKDERAKTSFVCAWTVVNIVCGGATFNGDR
Sbjct: 61  GFAGWNATAEERWSLAATVAHNGSRAKDERAKTSFVCAWTVVNIVCGGATFNGDR 115

The following BLAST results are available for this feature:
BLAST of CsaV3_3G020590 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57746.12.2e-61100.00hypothetical protein Csa_3G271390 [Cucumis sativus][more]
BLAST of CsaV3_3G020590 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G020590 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G020590 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LCG0|A0A0A0LCG0_CUCSA1.4e-61100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G271390 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G020590.1CsaV3_3G020590.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G020590CSPI03G20610Wild cucumber (PI 183967)cpicucB144
CsaV3_3G020590Cucsa.031460Cucumber (Gy14) v1cgycucB006
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G020590Melon (DHL92) v3.6.1cucmedB235
CsaV3_3G020590Watermelon (Charleston Gray)cucwcgB234
CsaV3_3G020590Watermelon (Charleston Gray)cucwcgB241
CsaV3_3G020590Watermelon (97103) v1cucwmB256
CsaV3_3G020590Watermelon (97103) v2cucwmbB216
CsaV3_3G020590Watermelon (97103) v2cucwmbB220
CsaV3_3G020590Wax gourdcucwgoB274
CsaV3_3G020590Silver-seed gourdcarcucB0518
CsaV3_3G020590Silver-seed gourdcarcucB0801
CsaV3_3G020590Cucumber (Gy14) v2cgybcucB117
CsaV3_3G020590Cucurbita maxima (Rimu)cmacucB0281
CsaV3_3G020590Cucurbita maxima (Rimu)cmacucB0547
CsaV3_3G020590Cucurbita moschata (Rifu)cmocucB0272
CsaV3_3G020590Cucurbita moschata (Rifu)cmocucB0532
CsaV3_3G020590Cucurbita pepo (Zucchini)cpecucB0686
CsaV3_3G020590Cucurbita pepo (Zucchini)cpecucB0749
CsaV3_3G020590Bottle gourd (USVL1VR-Ls)cuclsiB231
CsaV3_3G020590Melon (DHL92) v3.5.1cucmeB249