CsaV3_3G020280 (gene) Cucumber (Chinese Long) v3

NameCsaV3_3G020280
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionelongator complex protein 5
Locationchr3 : 16267022 .. 16276697 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGAATCTATTTGCAGAGCACTTAGAGACGGTGCATTACAGGGAGAGCTCGCCCCTGCTCTCACCATAAAGGACAACATCAATTCCCCATTTGGGTTTCATGCATTTTCCCATGTTCTGACGCAGCTCTCGAGCAATATTTTGGCTGGTAAATCGCAGTCTCGGTTAGTTCATTTCCCTTTTAGAGATACTGTTTCGGAAATTGAAATTGAAATCGTTACCTTTTCCTGTCGTTTTGATTGTTTTGCTTTGCTGGTGTGATTTTGATCTTAGAGGCCTCGTTCTACTTTCGTTCTCTCGAAGTCCGGCGTATTATGTCCAGCTCTTGAAGAAGAGGGGGCTGGATGTTGGGTCGTCTGCTAAATGGTAAAATTATCCTTGCAAAATTTTACATTTTCGCCTGTTTCAGGTTCGAATTATGAGAAATAGGGTTTGATGAAATTGGAAATTTTGGAGATGTTTTCTCTGGCTTCTCTCTATTGATTGATATGGTAAAATTGTTACACAGAAAATCCCTTTAATTTGGAATAAAATAATAAAGAATAAGTGCATAAGAATTTCATAATAATAAAGAATAATTGTTACTCATCTCTTTAGGATTTTTAACACAGCCCATGACCCAAGAGATCCATCTGAGATCAATTTCTTCTTGATCAAAACTTTTTCCAAGAAGCCCCAATCGACTCGATCAAATGCCTTTTCAAGGTCCTATTTGATAATCCAACCTTGCCTTTTCTTATGCCTTTAGTCCTCCACAGCTTCGTTTGCTAGAATAGGATCCAGGATTTGGCTGCCTTCCAAACAGGCACTTTGTGAGGGCGTTATTATACTGGGTATGATTATTTTCATTCTCTCAGAGCACTTTGGTAGTCAATTTGTACAACAAAGCAGTGAGACTTATGGGTCGAAAGTCTCTTACCTTTATTGCATCTTCCTTTTTCTTGATTAGACAAATAAAGTTCTCCTCTACGCACACATTTAGTTTCCATTCTCCTGGAGCTTTGTTTCTTCCCAGTGAATTTATAGCTGCCACAATTTCCAGCAGACTGAATTTTGCAGTGAGCTTTTTATTCTGATCCCCTGAAACTACAGACCAGTCAGAAGGGAAGGTACCTGCACGATCAGATTTCTCATAAAGGTTGCTGTAGAAGTCAAGGATTAAATGCTTAATTTCCGAGAAAGAGGTGGTGAGGATTCCTTGATCACTAACTAGCTTGGGAATCAGACTTCGTTTCTTTTTTGTTGCAAGAAAAGGTTGGAAAAGGCTTGTATTTTCGTCCCCCAATTTCAGCAAATTCAATTTACTTTTCTGGATTGAATCTCTTTCCTCCCTTCTATGTAGAGCTAGTAGGTCTCTCTTTCTTGGACAGTAACAATAGTTGATCCACGGTGTCCGTCTCTTATTGATCATATTTACTTTCTTCTTGTGCAATGGCCTTTAAAAGGGTTTCTTCTTGATAATTCTGTTCCTTTTTGTGATCTAAGTGCCAAGTTTTTTGCTGATCCTTGATGCTCCGAAGTTTATTTGATGGTGCAAAGTCCATCTATTCTTGTGGATTGCTCAAGGATAAAGAGTTTTCAATGATTTGGCAGCATTGCTTGTCAAACAACCAGCTGTTACAAAATCTAAAGGGGGAAGGCCCCAATTCGAAAGCCCCTGCTTCTAGTAAAATAGGGAAGTGGTCTGAGGATATCCTTCCTTGTTGGTTTACTCTTGTGTTCGCAAATGCCTCGTCCCAGTTAAAAGAAACTGAGAATCTGTCCAGCAAGGATGTCAAAGCTGTTCTTCCTTCTCTTGACCATGTAAACTTCCCATTCAATAAAGGAACTTCAATGAGTTTTGAGTCATCAATGAATGAGTTTCCTCCGCCACGTGTTGATCATCCTTTTGGAGAGCGCTCTCCCCCTGATCTGGTCATACTAAATTTCCCTCTCAAACACCAAGCTTTTGTGCAATACCCACCAAGGGAAAGTAACTCTGGACATATGAAATTCCTCTCTCTGTAGTCTGTTGGTCCATATATGTTGGTTACCCAGCACAACTTATTACACCATGTTCAGGATTTAATTAATAACAAGAAGCCCCCTTTTGAAACATCAATGACATAATACATAAAGTTTGCTTTTGTCCCACGTAGTCAATAAACTCCCGACTTCCATGAGCTTCAAGAAATGTCCATCCAATACCCTTCGAACTCCATAGTGCTTTGATCAGGTTGATGTCAATCTCCTCTTGTTTGGTTTCCTGAATCAAGACCAGGTCTGGATTGGTGTTTTTAGGCAATCTTTTAATGGCCAATTGTTTAGGCTGAACTAGGATTCCTCTGGTGTTCCGGGATAGTATTTTGATGGGGCACATCCTCTATCTGTGTTATATCTCTGACAATTTGACGCAGGCTAATCAGAACCAAGGAAATCTATTCCTCTGCCTCTTCACGTTGCGCCTCTGTTTCCCCTGTACATAAATCATCTCCTGGTAATAAATCTTCACTGCTGATACTGAACACTGAATCTTCATTATCAGACCCTTCATTTACTGCTCTTGAAATTGTTGAGGTAGGAATACATTGCACAAAGTCACAATTTGTGCCTGGGATTTTAAATGGGGAAAATTGAACTTTTGAAGGAGGGGAGGAGCTAACTGATCTATAACAAGTAAAATTGGGAGTAAGGAGCTTCACACAACTTTCTTCCATTAAGTCTGAGTTTGCCAAAGCTGTCCTTTAGGGTTGGACAAAATTGGAAATTTGGGAGAAGTTTTCTCTGTCTTTTCTCTATTGATTGATATGGTAAAACTGTTACCATTTATACACAGAAAATCCCTTTAATTTGGGATAAAATAATAAAGAATAAATGCATAATAATTTCGTGATAATACAGATGGAGGACAACCATTGGCTGAGGTAAAAATTCTTTTGAACAACCTTTTAACAGACGGAAGCTTCTGGAATATAGTGATGTGGTTTGCCAGATTTGTGACTCATTGGCAGAATGGCATAATGTGATGACTTCTTTGCAAGTCAGCTTTACAATTCTCCCTTACAATGAGTCGCAAGTTTTTAATTTATATTTATTGGGAAATTTTCTTTAAATTTACTTTTGTTTCCTCCAATTTTCATTTCTATTGATTTTGATGTTTGAGTTCTTTGTTGAATTACAAAAAACAAATCTAAAATTACTTCATTTTTTCAGTTCTAAAATTTGGCGTGGTTTTTGTAATAATTTTTAAAAATATAGTTGTGATGTTTTCTCTAACTTTCACGTTTGGAAATTAGCACGAGACTCAACAAGTAGATTATATCAATATTAATCAATTAAGGTGAAACTGACACCACAAAGTAGCAACAACTTTTGTTCCTCATCAAGAGAGATGTTATGAATCTTGATATTCTGAGAACTAACTTGCATTTATCATTGGAAAAAATAATATACCTTCACATTTCATATCAATTATTTCTCTTTACTGATATTTTTTATTTGCAAGTTCATTTGACCTTATTTGTATTATAGGATTCAAATTTTGGACTGTTATACAGATCCTCTTGGTTGGAAACAACGGTTTATGGAGGGTGAAAACGTTTCAAATGTTGACCAAGAAGTTTCAAATTTATCTCATCTTTGTACAAATGTGGGGGATATGGATAAACTTTTCTCTTCAATTATTGCACTCGGAAAAGGTGCCACTATAATCGTAATTATGAGTATAGTTTATGATTTTCTGGCCTAGGAAAAGGTTACAAGTTAAAATTCGATTTTCTAGCAGGATTTGTTGGAGAAGGAACTGTACGCTTTTGTGTCGCCGTAGACTCTGTATGGACTCTCTCTTTCATGACATATGATATTTTAGATGTGCCAATTACATCCCACAATTTCTTATACCATCCTTTGAATTTTTTTTTCTTGTGCTTATTACCCATTAAAAATAATTAAGGATATCAAGCTGTCAAGGAGTATTACAATTATGAATATTTCTTTTCTCCTACATATTATTTGTTGAATATAGTTAAGTAAGATGTTTAAATTTTGGGGGAAATATCAATTTATACTCCTCAACTTTGGGTTTTTTATCAATAAAAACTTTAGACTATTTAAGGGTGTTTGGTAGTGGAATAGTCAGGATTAGTGGAAATTTAAGAGGTGTTGGAATTCGTGAGAAATAAACGGTGGAACAGAAATGAAATTGTGAAGCATAAAAACGGTGAAAAAGAGGTTTGGATTAAAATCAGTCGGAATGAAATGAGTTTGGTCTTGCAAATCGATCCGAAAATGCTCAATCAAAACATCAGGCCCAAAACACATTCTAGTTAAATTTTAAGACTATCAAGGAGTACTCTCCTTTCTAGATTGTGTGTTGAATGATATTTCTTTCTTGGTTGGAAGTAAGAAATATAAATCTTCAAATTAGTGGGCTTGGCTCAAGGTGGGATTTAACCTAATTTCCTTTCCTTTTTTATCATAAACATGTTGTTTATTTATTACCCCCTTGTATCTTTTGTTAACAAGAGAAATTAATAAGAAAGTCAGATCGTGGTTTTATTTCTGGTACTTGGGTTTTCACGTAACTTGGTGTCTATTTTATTTACTACTTTTAACCCAAATAGAGAAAGACGAGATAGCCGCTGCCGTCGGGATCATCACCGCTGTGGATGTTGCTATTGCTGCCGCCATGGAAAAGTTGCTCCACCAGCTTCAGAAGCTGCTGGTGATCACAATGGGCCCATCCTCGGAGTCAACTGCATCGCCTAATGGAGGGAAAGAGCCACACGTGCCACATTTGTCCACCCACGCACTGCTGCCCCCAGTCTCCACAATTCAGCTGTCATACTCCCAACCGTGGCCTTCTGTCCAGTTGCAGCACCCTCTTTGTCAGTTGCACTTCCATGCAGCACCGCTGCCCTCATTTCACGTGTTACCCTCTTTCATGCATCGCTGCATTTTGATCCTTTATTGCAGTCGCACTTCAATGGTACTGGGATTGATCAACTCCATGATAAATCAAGGTTTGAAGTTGGTGAATCTTCGACACAATCAAAACCAACCGACTTGTCGATGTATTCCAAGAATCTAGTAACCTCGTTCTCTACTTTGTTCTCAAATTATATAACTAGTTCTCTGACACCATGTATAGGTGTCTTTTCAGTAGAGAAGCTGAAGGGCTAGAACTATTTTTCCTGGTCTCAAATATTCAAAATGTTTTTTGAGGGAGGCACCAATTTGATTTTTTGACAAGGGAGACTCCTTGTGATGCCCAGGAACGTTTTTGGAGAGAAGAGGACTTTCTTATTCGGTCCATATTGATTAATAGTATGAAATCACGAATTGACAAGCCTTTGCTTTATGCAGCAACTGCGAAGGATCTATGGGACACTACTCAAGAACTCTATTCGAAGCGTTGAAACGCCTCTCGTTTGTATACATTGAGGAAAGAAGTCCATGATTGCTAGCAAGGAACTCTGAGTGTTACCTTCTGCTTCAATGAACTTTTCCAACTTTGGCAAGAGATGGACTTGTACAGAGAGACACTATGAGATACTTCAAATGATAGAATACAATTTGCTAGACTCGAATAAGCTTATTGGATTTATTATTTCCTTGCAGGTCTCAACCCAAAGTTTGACATTGTTTGTGGTCGTATACTGGGCTAGAAACCCCTTTCCTCCTTAATGGAAGTGTTATGAAGTCCGTCTTGAAGAAGACCGTACAAGTGTCATGAATGTTCTGACTACTCTTGCTACTGACTTCGTTGCCTTCAGTGCTAGATCCTCTATGCATGATAGTGAGGAGGACAAGAGGAAACCAGTCCCTATCTGTAAGCATTGCAAGAAACAATGGTATACTAAGGATCGGTGTTGGAAACTTTATGGTTGTCTTCTAGTAGGTAAGAAATGTTCTCAAATGATATATAGAATTTAGGACATGCTTATACGGGTGAATTTGCTGGAACATCTCAACCATCCAACCCTACGGTAAACTAGACTGGTCCCAGTCCACCCTCTACTCTATGAGCCAAAGTGACATTGCTCAGTCATGTATGCCTTAAACCCTTAGTCTTATTAGTGTCGATGAGAAGAATCCCTGGATCTTAGAGTCTGGTGCTACAGATCACTTGACAGGTTTCTCTGAGAATTTTGTTTCTTATATTTCATGTGCTAGTAATGAAAAGATCAGAATAGTCGATCGTTCCTTAGCTCCAATTGTTGGGAAGGGGCAAATTTTCCCCTTTGAGGGGCTATCCCTAAAAAATCTGTTGCATGTGCCTAAGATTTCCTATAATTTGCTATCTATAAGCAAGATCACTCGTGAGCTGAACTGGAAAGCTACTTTCTTACCTGATTCTGTTTCTTTTTAGGACTTAAGCTCGAGGAGGACGATTGACACTAGACTCTACCTCCTTGATGATGATACTTTCGCTAGCAGTATTCCTAGGAATAGTTTACTGTCTTCATATTTTACTATTTTTGAACAAGATTGTATGTTATGGCATTTTCGGTTGGGCCATCCAAATTTTCAATATATGAAGTATTTATTTCCCTATCTCTTCTCTAATGTTGATATCTCCTCTTTATCTTGTGATGTGCGTATTAAGGCCAAATAGCATCGGGTTTCCTTTCTGCCATAGCCATATAAGCCAACTCAACCTTTCACCCTTATTCATAGCGATGTTTGGGGTCCCTCAAAGGTCACTCCTCTTCTGAAAAATGATGGTTTGTAACCTTTATTGATGATCATACCCGTCTTTCATGGGTCTTCCTTATCATTGATAAATCCAAGGTCTCCTTTGTCTTCTAGAACTTCTATCACACAGTAGCAATGCAGTTCAATACAAAAATTGCAATTCTTCGGAGTAATAATGGTCGTGAGTTTCAAAACCATATCCCTAGTGAGTTTATGTTCTCCAAAGGGATTGTCCACTAGAGCTTGTGTGCCTACACCCCCAAGAAAATGGGGTTGTTGAGCGAAAAAACTGTCATCTTCTGGAAGTAGCCCATTCTCCTATGTTGTCTACTTCTCTTCCTAATTATTTGTGGGGTGATGTCGTTCTTACTGCAGCCTATCTCATCAATAGAATGTCTTCTCGTGTCCCGCCTAGTGTTTTAAAAGACTCACTAAGGGGCACGCCTAGGTTCAAGTCGCACAGATGGGGCTTATTTGTGAAGAAGCAAGGCGTTTTCACTAAAGCCCGGCTTAGGCGCGCGCCTTGCTTGAGGGAAAGCTGATTTACTTGTCACATACTTGACCAAATATCTCCTATGCTGTGAATGCCATTAACCAGTTTATGCAGGCTCTGTATGAGGAACACATGGAGACAGTTAACAGAATCTTGAGGTACTTAAAAACAACCCTTGGTAAAGGGTTGATGTTCTAGAAGATCGATAGGAGAGCTATTGAAGCCAATATTGGTTTTGACTAGGACAATCTCGTAACCTGGAGAAATTGGAAACAAAAGCAGTGTTGTAGCTGAGTACACGACTATGAGTTTGGAGATATGTGAGAAAGTTTGACTTCAGAAAGTTTTATTTGACTTTTAGGACTGTGAGGTGCCAATGAAATTATTCTGTGATAATAAGGCAACTATTAGCATCGCCAACAATTTAGTTCGACATGTTAGTACTAAACAATTGGAGATTGATCGACACTACATTAAAGAAAGATTGGACAGTGGTGGCATATGCATTCCTTACATCCCCTCAAGCCAACAAGTTGTTGACGTTGTCGCCAAGAGAGAGGCTTCTCAGACAGAGCTTTGACTCATGGGTTAGCAAGTTGGGTCTCATTGATATCTACATCTTAACTCGAGGGGAAGTGTTAGAATTATTGAGCTTGCCCCAAAGGACTTAACCTAATTTTCTTTCCTTTTTTTTTTATCATAAATATGATGTCTATTTATTTCCCCTTGTATCTTTTCTTAATAAGAGAAATTAATGAAAAGATTAGATCATGGTTTTTCTCCTAGTACTCGGGTTTCTTTGTAACTCGGTGTCTATTTTCTTTACCACTTTTAATAATAAACAATGTGAATTATCTGTTGAGTTGTTTTCATTTTTAGTTAAGTGCTCGTCAGATTCTCTAGTTAGTTTCACAAGTTGTATATCTGTTCCGTAGATTTTTGCTCACTTTTTTATTTTTTATTATTCGTTAGTAATCTGAATATTTCTTTTATTTTCTCGTTATTTAATTTTATGAAATTTTACCAGGTAACCAACATGTTGAGACATTCATCTATATCAGCACTTGCAGGTCTGTTAAGCAGCCTTCGGAGCAATGGTATGGATATAATAATTACCTCCCAAAATTTCTGATGCTGAAATAAATCACATCTCATGAGTTGTGCTTCATATTCTTTCACTTGGTAGCTCTTATTTTGATTGGTCCTGTAACTGTTGTCATGTAATTGTAGATTCGGTTTCAAGTACATTGTGGTTGGTACATGAAGACCTTCATGAGGAAAAGGTTATAGCTGCTTTTGAATATATGTCCTCCATAGTGGCAACACTTGAGGCATTAACTCCGTCGCCATATGTGAGCAGAAGCAATATGGACAATTCCTATCTTGAACACAGATCTACAAAAGGGAGGTTTCATGTGCGGATGAAACGAAGAAATGGACGTGTTCGAGTCATTGTAAATTCTCTTCTCTTTGCAAAACTTTTGGTATTTACATGTAAAACTTTTGGTTGTCCTTGTGTTCACAATGTTCTATTATAGTCCGAAGATTTTAATGTCGAGCAATCAGGCATCAAATTTACATCCATTTCATCTGAAGATGCAGTCATCAATCAAAGCCTTATACCGAAGGTTGGTTTATCTTGATTTTTACTTTCTTTCAATTATTTTCATAATTCTTTTTTCTTTAATCCAAAGTTCAGATTTATCAGAATTGAGTTTCATAGCATTAGGAGTCTTCTTAAATTATGCTGCTTCTAAGTTTAGATGGACAAACATAAAGAACATTTGTTCTTGATATTGGCTGATCTTTCCATAGCTTCTGTAGTCATTGAAACTTCTCTTTCTCATAATTTACATGAATAAAGAACTGATGAATGGACGACTTTCTTCTCTCAGGTGCAGTTCAATCTTCAGTTGTCAGAGAAAGAGCGAAATGACAGGGCCAGAGTTGTTCTTCCTTTTGAGCATCAAGGTTCAACATTTTGACTCTATCTTTACTTTTCACAAAATAATCCATGGTTAAATTACAAATTCGGTCTATATGATTTTCCTAAAAGTTAGAATGTAGTCCCTATAATAGTTTTGATAAAATCCTCGTGTAGCCCTTGAGAATTTTTACCAAATTATAAAATGACTATGAGAGGCTTTATCTATAACTGCAAGGACTAAATTTTAACTTTCTCTGATCCACCAGGATGAAATCTATAATTTAACCTAATTCTGACCAGAGTTGATCTATTATCTAGATGGATAAATTCTTTTGACACTTTCTTTTTCTTGTTCACTGTCACAACGTTTGGTTTTTATTGTAGGAACTGGTAAACCGATACAAATATACGATGGTCGACGATCTTTTTCTGAAAGCAAAGATGACAATACACCTCTCATGACCAATGAGAAAGGCAATGACGATGGATCAGGAAAGGGTGAGATCGTATATTTCCGCGATTCAGATGATGAGATGCCAGATTCTGATGAGGACCCGGACGATGATTTAGACATATAA

mRNA sequence

ATGGCGGAATCTATTTGCAGAGCACTTAGAGACGGTGCATTACAGGGAGAGCTCGCCCCTGCTCTCACCATAAAGGACAACATCAATTCCCCATTTGGGTTTCATGCATTTTCCCATGTTCTGACGCAGCTCTCGAGCAATATTTTGGCTGGTAAATCGCAGTCTCGAGGCCTCGTTCTACTTTCGTTCTCTCGAAGTCCGGCGTATTATGTCCAGCTCTTGAAGAAGAGGGGGCTGGATGTTGGGTCGTCTGCTAAATGGATTCAAATTTTGGACTGTTATACAGATCCTCTTGGTTGGAAACAACGGTTTATGGAGGGTGAAAACGTTTCAAATGTTGACCAAGAAGTTTCAAATTTATCTCATCTTTGTACAAATGTGGGGGATATGGATAAACTTTTCTCTTCAATTATTGCACTCGGAAAAGGATTTGTTGGAGAAGGAACTGTACGCTTTTGTGTCGCCGTAGACTCTGTAACCAACATGTTGAGACATTCATCTATATCAGCACTTGCAGGTCTGTTAAGCAGCCTTCGGAGCAATGATTCGGTTTCAAGTACATTGTGGTTGGTACATGAAGACCTTCATGAGGAAAAGGTTATAGCTGCTTTTGAATATATGTCCTCCATAGTGGCAACACTTGAGGCATTAACTCCGTCGCCATATGTGAGCAGAAGCAATATGGACAATTCCTATCTTGAACACAGATCTACAAAAGGGAGGTTTCATGTGCGGATGAAACGAAGAAATGGACGTGTTCGAGTCATTTCCGAAGATTTTAATGTCGAGCAATCAGGCATCAAATTTACATCCATTTCATCTGAAGATGCAGTCATCAATCAAAGCCTTATACCGAAGGTGCAGTTCAATCTTCAGTTGTCAGAGAAAGAGCGAAATGACAGGGCCAGAGTTGTTCTTCCTTTTGAGCATCAAGGAACTGGTAAACCGATACAAATATACGATGGTCGACGATCTTTTTCTGAAAGCAAAGATGACAATACACCTCTCATGACCAATGAGAAAGGCAATGACGATGGATCAGGAAAGGGTGAGATCGTATATTTCCGCGATTCAGATGATGAGATGCCAGATTCTGATGAGGACCCGGACGATGATTTAGACATATAA

Coding sequence (CDS)

ATGGCGGAATCTATTTGCAGAGCACTTAGAGACGGTGCATTACAGGGAGAGCTCGCCCCTGCTCTCACCATAAAGGACAACATCAATTCCCCATTTGGGTTTCATGCATTTTCCCATGTTCTGACGCAGCTCTCGAGCAATATTTTGGCTGGTAAATCGCAGTCTCGAGGCCTCGTTCTACTTTCGTTCTCTCGAAGTCCGGCGTATTATGTCCAGCTCTTGAAGAAGAGGGGGCTGGATGTTGGGTCGTCTGCTAAATGGATTCAAATTTTGGACTGTTATACAGATCCTCTTGGTTGGAAACAACGGTTTATGGAGGGTGAAAACGTTTCAAATGTTGACCAAGAAGTTTCAAATTTATCTCATCTTTGTACAAATGTGGGGGATATGGATAAACTTTTCTCTTCAATTATTGCACTCGGAAAAGGATTTGTTGGAGAAGGAACTGTACGCTTTTGTGTCGCCGTAGACTCTGTAACCAACATGTTGAGACATTCATCTATATCAGCACTTGCAGGTCTGTTAAGCAGCCTTCGGAGCAATGATTCGGTTTCAAGTACATTGTGGTTGGTACATGAAGACCTTCATGAGGAAAAGGTTATAGCTGCTTTTGAATATATGTCCTCCATAGTGGCAACACTTGAGGCATTAACTCCGTCGCCATATGTGAGCAGAAGCAATATGGACAATTCCTATCTTGAACACAGATCTACAAAAGGGAGGTTTCATGTGCGGATGAAACGAAGAAATGGACGTGTTCGAGTCATTTCCGAAGATTTTAATGTCGAGCAATCAGGCATCAAATTTACATCCATTTCATCTGAAGATGCAGTCATCAATCAAAGCCTTATACCGAAGGTGCAGTTCAATCTTCAGTTGTCAGAGAAAGAGCGAAATGACAGGGCCAGAGTTGTTCTTCCTTTTGAGCATCAAGGAACTGGTAAACCGATACAAATATACGATGGTCGACGATCTTTTTCTGAAAGCAAAGATGACAATACACCTCTCATGACCAATGAGAAAGGCAATGACGATGGATCAGGAAAGGGTGAGATCGTATATTTCCGCGATTCAGATGATGAGATGCCAGATTCTGATGAGGACCCGGACGATGATTTAGACATATAA

Protein sequence

MAESICRALRDGALQGELAPALTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVLLSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNLSHLCTNVGDMDKLFSSIIALGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRSNDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRSTKGRFHVRMKRRNGRVRVISEDFNVEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKERNDRARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNTPLMTNEKGNDDGSGKGEIVYFRDSDDEMPDSDEDPDDDLDI
BLAST of CsaV3_3G020280 vs. NCBI nr
Match: XP_004145651.1 (PREDICTED: elongator complex protein 5 isoform X2 [Cucumis sativus] >KGN57713.1 hypothetical protein Csa_3G258150 [Cucumis sativus])

HSP 1 Score: 729.6 bits (1882), Expect = 5.6e-207
Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0

Query: 1   MAESICRALRDGALQGELAPALTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60
           MAESICRALRDGALQGELAPALTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL
Sbjct: 1   MAESICRALRDGALQGELAPALTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60

Query: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120
           LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL
Sbjct: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120

Query: 121 SHLCTNVGDMDKLFSSIIALGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS 180
           SHLCTNVGDMDKLFSSIIALGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS
Sbjct: 121 SHLCTNVGDMDKLFSSIIALGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS 180

Query: 181 NDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRSTKG 240
           NDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRSTKG
Sbjct: 181 NDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRSTKG 240

Query: 241 RFHVRMKRRNGRVRVISEDFNVEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKERND 300
           RFHVRMKRRNGRVRVISEDFNVEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKERND
Sbjct: 241 RFHVRMKRRNGRVRVISEDFNVEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKERND 300

Query: 301 RARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNTPLMTNEKGNDDGSGKGEIVYFRDSDD 360
           RARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNTPLMTNEKGNDDGSGKGEIVYFRDSDD
Sbjct: 301 RARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNTPLMTNEKGNDDGSGKGEIVYFRDSDD 360

Query: 361 EMPDSDEDPDDDLDI 376
           EMPDSDEDPDDDLDI
Sbjct: 361 EMPDSDEDPDDDLDI 375

BLAST of CsaV3_3G020280 vs. NCBI nr
Match: XP_011651354.1 (PREDICTED: elongator complex protein 5 isoform X1 [Cucumis sativus])

HSP 1 Score: 724.9 bits (1870), Expect = 1.4e-205
Identity = 375/376 (99.73%), Postives = 375/376 (99.73%), Query Frame = 0

Query: 1   MAESICRALRDGALQGELAPALTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60
           MAESICRALRDGALQGELAPALTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL
Sbjct: 1   MAESICRALRDGALQGELAPALTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60

Query: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120
           LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL
Sbjct: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120

Query: 121 SHLCTNVGDMDKLFSSIIALGK-GFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLR 180
           SHLCTNVGDMDKLFSSIIALGK GFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLR
Sbjct: 121 SHLCTNVGDMDKLFSSIIALGKAGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLR 180

Query: 181 SNDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRSTK 240
           SNDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRSTK
Sbjct: 181 SNDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRSTK 240

Query: 241 GRFHVRMKRRNGRVRVISEDFNVEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKERN 300
           GRFHVRMKRRNGRVRVISEDFNVEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKERN
Sbjct: 241 GRFHVRMKRRNGRVRVISEDFNVEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKERN 300

Query: 301 DRARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNTPLMTNEKGNDDGSGKGEIVYFRDSD 360
           DRARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNTPLMTNEKGNDDGSGKGEIVYFRDSD
Sbjct: 301 DRARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNTPLMTNEKGNDDGSGKGEIVYFRDSD 360

Query: 361 DEMPDSDEDPDDDLDI 376
           DEMPDSDEDPDDDLDI
Sbjct: 361 DEMPDSDEDPDDDLDI 376

BLAST of CsaV3_3G020280 vs. NCBI nr
Match: XP_008461560.1 (PREDICTED: elongator complex protein 5 isoform X2 [Cucumis melo])

HSP 1 Score: 693.7 bits (1789), Expect = 3.4e-196
Identity = 358/375 (95.47%), Postives = 362/375 (96.53%), Query Frame = 0

Query: 1   MAESICRALRDGALQGELAPALTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60
           MAESICRALRDGALQGELAP LTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL
Sbjct: 1   MAESICRALRDGALQGELAPTLTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60

Query: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120
           LSFSRSPAYYVQLLKKRGL+VGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL
Sbjct: 61  LSFSRSPAYYVQLLKKRGLNVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120

Query: 121 SHLCTNVGDMDKLFSSIIALGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS 180
           SHLCTNVGDMDKLFSSII LGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS
Sbjct: 121 SHLCTNVGDMDKLFSSIITLGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS 180

Query: 181 NDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRSTKG 240
           NDSVSST WLVHEDLHEEKVIAA EYMSSIVATLEALTP PY SRSN+DNSYLE RSTKG
Sbjct: 181 NDSVSSTFWLVHEDLHEEKVIAALEYMSSIVATLEALTPPPYESRSNVDNSYLERRSTKG 240

Query: 241 RFHVRMKRRNGRVRVISEDFNVEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKERND 300
           RFHVR+KRRNGRVRVISEDFNVE SGIKFTSISSEDAVINQ LIPKVQFNLQLSEKE ND
Sbjct: 241 RFHVRIKRRNGRVRVISEDFNVELSGIKFTSISSEDAVINQVLIPKVQFNLQLSEKELND 300

Query: 301 RARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNTPLMTNEKGNDDGSGKGEIVYFRDSDD 360
           RARVVLPFEHQGTGKPIQIYDGRRS SESKDDN PLM+NEKGNDDG GKGEIVYFRDSDD
Sbjct: 301 RARVVLPFEHQGTGKPIQIYDGRRSLSESKDDNIPLMSNEKGNDDGWGKGEIVYFRDSDD 360

Query: 361 EMPDSDEDPDDDLDI 376
           EMPDSDEDPDDDLDI
Sbjct: 361 EMPDSDEDPDDDLDI 375

BLAST of CsaV3_3G020280 vs. NCBI nr
Match: XP_008461558.1 (PREDICTED: elongator complex protein 5 isoform X1 [Cucumis melo] >XP_008461559.1 PREDICTED: elongator complex protein 5 isoform X1 [Cucumis melo])

HSP 1 Score: 689.1 bits (1777), Expect = 8.3e-195
Identity = 358/376 (95.21%), Postives = 362/376 (96.28%), Query Frame = 0

Query: 1   MAESICRALRDGALQGELAPALTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60
           MAESICRALRDGALQGELAP LTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL
Sbjct: 1   MAESICRALRDGALQGELAPTLTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60

Query: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120
           LSFSRSPAYYVQLLKKRGL+VGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL
Sbjct: 61  LSFSRSPAYYVQLLKKRGLNVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120

Query: 121 SHLCTNVGDMDKLFSSIIALGK-GFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLR 180
           SHLCTNVGDMDKLFSSII LGK GFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLR
Sbjct: 121 SHLCTNVGDMDKLFSSIITLGKAGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLR 180

Query: 181 SNDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRSTK 240
           SNDSVSST WLVHEDLHEEKVIAA EYMSSIVATLEALTP PY SRSN+DNSYLE RSTK
Sbjct: 181 SNDSVSSTFWLVHEDLHEEKVIAALEYMSSIVATLEALTPPPYESRSNVDNSYLERRSTK 240

Query: 241 GRFHVRMKRRNGRVRVISEDFNVEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKERN 300
           GRFHVR+KRRNGRVRVISEDFNVE SGIKFTSISSEDAVINQ LIPKVQFNLQLSEKE N
Sbjct: 241 GRFHVRIKRRNGRVRVISEDFNVELSGIKFTSISSEDAVINQVLIPKVQFNLQLSEKELN 300

Query: 301 DRARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNTPLMTNEKGNDDGSGKGEIVYFRDSD 360
           DRARVVLPFEHQGTGKPIQIYDGRRS SESKDDN PLM+NEKGNDDG GKGEIVYFRDSD
Sbjct: 301 DRARVVLPFEHQGTGKPIQIYDGRRSLSESKDDNIPLMSNEKGNDDGWGKGEIVYFRDSD 360

Query: 361 DEMPDSDEDPDDDLDI 376
           DEMPDSDEDPDDDLDI
Sbjct: 361 DEMPDSDEDPDDDLDI 376

BLAST of CsaV3_3G020280 vs. NCBI nr
Match: XP_022948561.1 (elongator complex protein 5 isoform X2 [Cucurbita moschata])

HSP 1 Score: 620.9 bits (1600), Expect = 2.8e-174
Identity = 313/375 (83.47%), Postives = 343/375 (91.47%), Query Frame = 0

Query: 1   MAESICRALRDGALQGELAPALTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60
           MA+SICRALRDGAL+GELAPALT+KD+INSPFGFHAF+HVL QLSSNILAGKSQSRGLVL
Sbjct: 1   MADSICRALRDGALEGELAPALTLKDSINSPFGFHAFAHVLMQLSSNILAGKSQSRGLVL 60

Query: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120
           L+FSRSPAYY++LLKK G++VGSS KWIQILDCYTDPLGWK+RF  GE +SNV QEVSNL
Sbjct: 61  LAFSRSPAYYLELLKKSGVNVGSSEKWIQILDCYTDPLGWKERFTGGEKISNVHQEVSNL 120

Query: 121 SHLCTNVGDMDKLFSSIIALGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS 180
           SHLCTNV DMD LFSSII LGKGFVGEGTVRFCVAVDSVT+MLRHSS SA+AGLLS+LRS
Sbjct: 121 SHLCTNVRDMDNLFSSIITLGKGFVGEGTVRFCVAVDSVTDMLRHSSTSAVAGLLSNLRS 180

Query: 181 NDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRSTKG 240
           ND VSST WLVHEDLHEEKVIAA EYMSS+VAT+E LTPSPYV  S+++  YLEH STKG
Sbjct: 181 NDKVSSTFWLVHEDLHEEKVIAALEYMSSMVATVEPLTPSPYVRESSLNTPYLEHSSTKG 240

Query: 241 RFHVRMKRRNGRVRVISEDFNVEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKERND 300
           RFHVR+KRRNGRVRVI E+F VEQSGIKFTSISSEDAV+NQ L+PKVQFNLQLSEKE+ D
Sbjct: 241 RFHVRIKRRNGRVRVICENFKVEQSGIKFTSISSEDAVVNQGLVPKVQFNLQLSEKEQID 300

Query: 301 RARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNTPLMTNEKGNDDGSGKGEIVYFRDSDD 360
           RARVVLPFEHQG GKPIQIYDGRRS +ESKDD+ PL TNEK  D+  GKGEI+YFRDS+D
Sbjct: 301 RARVVLPFEHQGNGKPIQIYDGRRSLTESKDDDKPLSTNEKSKDEEPGKGEIIYFRDSED 360

Query: 361 EMPDSDEDPDDDLDI 376
           EMPDSDEDPDDDLDI
Sbjct: 361 EMPDSDEDPDDDLDI 375

BLAST of CsaV3_3G020280 vs. TAIR10
Match: AT2G18410.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 375.6 bits (963), Expect = 3.7e-104
Identity = 213/380 (56.05%), Postives = 271/380 (71.32%), Query Frame = 0

Query: 1   MAESICRALRDGALQGELAPALTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60
           MAESI R LRDG  +GELAPALTI++ + SPFG     ++LT LSS+ILAGKS S+GLVL
Sbjct: 1   MAESIFRKLRDGGEEGELAPALTIEETVASPFGLDVSGYLLTNLSSSILAGKSSSQGLVL 60

Query: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120
           ++FSRSP++Y+QLLK++G+ V SS+KWI+ILDCYTDPLGW       +  S    E S+L
Sbjct: 61  ITFSRSPSFYLQLLKQKGIVVSSSSKWIRILDCYTDPLGWI------DQSSTSFSEGSSL 120

Query: 121 SHLCTNVGDMDKLFSSIIALGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS 180
             L   V D+ KLFSSII  G+  VG G  RFCVA+DSV  +LRHS++  ++GLL+ LRS
Sbjct: 121 IKLHKCVSDLKKLFSSIIEAGRELVGTGKTRFCVAIDSVNELLRHSAMPLVSGLLTDLRS 180

Query: 181 NDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRS-TK 240
           +  +SS  W ++ DLH+EKV  A EY+S++ A LE L PS    R+ ++N +  H+   K
Sbjct: 181 HAQISSVFWSLNTDLHQEKVTNALEYISTMKANLEPLCPSSDGQRNALENLFSVHQDFGK 240

Query: 241 GRFHVRMKRRNGRVRVISEDFNVEQSGIKFTSISSEDAVI--NQSLIPKVQFNLQLSEKE 300
           GRFHVR K R GRVRV+SE+++V+QSGI F+ ISS D VI   +SL+PKVQFNLQLSEKE
Sbjct: 241 GRFHVRFKLRKGRVRVMSEEYHVDQSGINFSPISSVDTVIAATKSLLPKVQFNLQLSEKE 300

Query: 301 RNDRARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNTPLMTNEKGND-DGSGK-GEIVYF 360
           R ++ +VVLPFEHQ  GK  +IYDGRRS  + K + TPL + E   D   SGK GEI+YF
Sbjct: 301 RVEKEKVVLPFEHQDDGKSNEIYDGRRSLVDGKIETTPLSSMELQTDVVSSGKGGEIIYF 360

Query: 361 RDSDDEMPDSDEDPDDDLDI 376
           RDSDDE PDS      DLDI
Sbjct: 361 RDSDDEHPDSXXXXXXDLDI 374

BLAST of CsaV3_3G020280 vs. Swiss-Prot
Match: sp|F4IQJ2|ELP5_ARATH (Elongator complex protein 5 OS=Arabidopsis thaliana OX=3702 GN=ELP5 PE=1 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 6.7e-103
Identity = 213/380 (56.05%), Postives = 271/380 (71.32%), Query Frame = 0

Query: 1   MAESICRALRDGALQGELAPALTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60
           MAESI R LRDG  +GELAPALTI++ + SPFG     ++LT LSS+ILAGKS S+GLVL
Sbjct: 1   MAESIFRKLRDGGEEGELAPALTIEETVASPFGLDVSGYLLTNLSSSILAGKSSSQGLVL 60

Query: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120
           ++FSRSP++Y+QLLK++G+ V SS+KWI+ILDCYTDPLGW       +  S    E S+L
Sbjct: 61  ITFSRSPSFYLQLLKQKGIVVSSSSKWIRILDCYTDPLGWI------DQSSTSFSEGSSL 120

Query: 121 SHLCTNVGDMDKLFSSIIALGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS 180
             L   V D+ KLFSSII  G+  VG G  RFCVA+DSV  +LRHS++  ++GLL+ LRS
Sbjct: 121 IKLHKCVSDLKKLFSSIIEAGRELVGTGKTRFCVAIDSVNELLRHSAMPLVSGLLTDLRS 180

Query: 181 NDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRS-TK 240
           +  +SS  W ++ DLH+EKV  A EY+S++ A LE L PS    R+ ++N +  H+   K
Sbjct: 181 HAQISSVFWSLNTDLHQEKVTNALEYISTMKANLEPLCPSSDGQRNALENLFSVHQDFGK 240

Query: 241 GRFHVRMKRRNGRVRVISEDFNVEQSGIKFTSISSEDAVI--NQSLIPKVQFNLQLSEKE 300
           GRFHVR K R GRVRV+SE+++V+QSGI F+ ISS D VI   +SL+PKVQFNLQLSEKE
Sbjct: 241 GRFHVRFKLRKGRVRVMSEEYHVDQSGINFSPISSVDTVIAATKSLLPKVQFNLQLSEKE 300

Query: 301 RNDRARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNTPLMTNEKGND-DGSGK-GEIVYF 360
           R ++ +VVLPFEHQ  GK  +IYDGRRS  + K + TPL + E   D   SGK GEI+YF
Sbjct: 301 RVEKEKVVLPFEHQDDGKSNEIYDGRRSLVDGKIETTPLSSMELQTDVVSSGKGGEIIYF 360

Query: 361 RDSDDEMPDSDEDPDDDLDI 376
           RDSDDE PDS      DLDI
Sbjct: 361 RDSDDEHPDSXXXXXXDLDI 374

BLAST of CsaV3_3G020280 vs. Swiss-Prot
Match: sp|A1A5V9|ELP5_DANRE (Elongator complex protein 5 OS=Danio rerio OX=7955 GN=elp5 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 4.2e-04
Identity = 56/224 (25.00%), Postives = 92/224 (41.07%), Query Frame = 0

Query: 154 VAVDSVTNMLRHSSISALAGLLSSLRSNDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVAT 213
           + VDS++ +LRH     +   L  LR    V + + L+H DLH + ++    +++S V  
Sbjct: 110 LVVDSLSLVLRHHDPVIVCQSLQELRKGGVVKTIIGLLHSDLHLQGIVGIVCHLASTV-- 169

Query: 214 LEALTPSPYVSRSNMDNSYLEHRSTKGRFHVRMKRRNGRVRVISED--FNVEQSGIKFTS 273
                    +S +  +N      +T  R       +      +SED   +V+    +   
Sbjct: 170 ---------ISVAPTNNERHAVATTTRRTKSGKVMQEEEYFSVSEDATLSVQSKPRQHDR 229

Query: 274 ISSEDAVINQSLIPKVQFNLQLSEKERNDRARVVLPFEHQGTGKPIQIYDGRRSFSESKD 333
           +  E           + FNL+LSE+ER  + +V LPF                 FS+ K 
Sbjct: 230 VEKEQDSAEVDPASNLTFNLRLSEEERRAKEKVALPF----------------VFSQEKK 289

Query: 334 DNTPLMTNEKGNDDGSGKGEIVYFRDSDDEMPDSDEDPDDDLDI 376
                 T         G G I+Y  D++D+    +EDPDDDLD+
Sbjct: 290 SALLRPT--------PGSGRIMYEPDANDDF--DEEDPDDDLDV 296

BLAST of CsaV3_3G020280 vs. TrEMBL
Match: tr|A0A0A0L7D4|A0A0A0L7D4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G258150 PE=4 SV=1)

HSP 1 Score: 729.6 bits (1882), Expect = 3.7e-207
Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0

Query: 1   MAESICRALRDGALQGELAPALTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60
           MAESICRALRDGALQGELAPALTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL
Sbjct: 1   MAESICRALRDGALQGELAPALTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60

Query: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120
           LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL
Sbjct: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120

Query: 121 SHLCTNVGDMDKLFSSIIALGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS 180
           SHLCTNVGDMDKLFSSIIALGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS
Sbjct: 121 SHLCTNVGDMDKLFSSIIALGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS 180

Query: 181 NDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRSTKG 240
           NDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRSTKG
Sbjct: 181 NDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRSTKG 240

Query: 241 RFHVRMKRRNGRVRVISEDFNVEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKERND 300
           RFHVRMKRRNGRVRVISEDFNVEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKERND
Sbjct: 241 RFHVRMKRRNGRVRVISEDFNVEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKERND 300

Query: 301 RARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNTPLMTNEKGNDDGSGKGEIVYFRDSDD 360
           RARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNTPLMTNEKGNDDGSGKGEIVYFRDSDD
Sbjct: 301 RARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNTPLMTNEKGNDDGSGKGEIVYFRDSDD 360

Query: 361 EMPDSDEDPDDDLDI 376
           EMPDSDEDPDDDLDI
Sbjct: 361 EMPDSDEDPDDDLDI 375

BLAST of CsaV3_3G020280 vs. TrEMBL
Match: tr|A0A1S3CF06|A0A1S3CF06_CUCME (elongator complex protein 5 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500130 PE=4 SV=1)

HSP 1 Score: 693.7 bits (1789), Expect = 2.2e-196
Identity = 358/375 (95.47%), Postives = 362/375 (96.53%), Query Frame = 0

Query: 1   MAESICRALRDGALQGELAPALTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60
           MAESICRALRDGALQGELAP LTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL
Sbjct: 1   MAESICRALRDGALQGELAPTLTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60

Query: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120
           LSFSRSPAYYVQLLKKRGL+VGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL
Sbjct: 61  LSFSRSPAYYVQLLKKRGLNVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120

Query: 121 SHLCTNVGDMDKLFSSIIALGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS 180
           SHLCTNVGDMDKLFSSII LGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS
Sbjct: 121 SHLCTNVGDMDKLFSSIITLGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS 180

Query: 181 NDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRSTKG 240
           NDSVSST WLVHEDLHEEKVIAA EYMSSIVATLEALTP PY SRSN+DNSYLE RSTKG
Sbjct: 181 NDSVSSTFWLVHEDLHEEKVIAALEYMSSIVATLEALTPPPYESRSNVDNSYLERRSTKG 240

Query: 241 RFHVRMKRRNGRVRVISEDFNVEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKERND 300
           RFHVR+KRRNGRVRVISEDFNVE SGIKFTSISSEDAVINQ LIPKVQFNLQLSEKE ND
Sbjct: 241 RFHVRIKRRNGRVRVISEDFNVELSGIKFTSISSEDAVINQVLIPKVQFNLQLSEKELND 300

Query: 301 RARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNTPLMTNEKGNDDGSGKGEIVYFRDSDD 360
           RARVVLPFEHQGTGKPIQIYDGRRS SESKDDN PLM+NEKGNDDG GKGEIVYFRDSDD
Sbjct: 301 RARVVLPFEHQGTGKPIQIYDGRRSLSESKDDNIPLMSNEKGNDDGWGKGEIVYFRDSDD 360

Query: 361 EMPDSDEDPDDDLDI 376
           EMPDSDEDPDDDLDI
Sbjct: 361 EMPDSDEDPDDDLDI 375

BLAST of CsaV3_3G020280 vs. TrEMBL
Match: tr|A0A1S3CER6|A0A1S3CER6_CUCME (elongator complex protein 5 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500130 PE=4 SV=1)

HSP 1 Score: 689.1 bits (1777), Expect = 5.5e-195
Identity = 358/376 (95.21%), Postives = 362/376 (96.28%), Query Frame = 0

Query: 1   MAESICRALRDGALQGELAPALTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60
           MAESICRALRDGALQGELAP LTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL
Sbjct: 1   MAESICRALRDGALQGELAPTLTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60

Query: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120
           LSFSRSPAYYVQLLKKRGL+VGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL
Sbjct: 61  LSFSRSPAYYVQLLKKRGLNVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120

Query: 121 SHLCTNVGDMDKLFSSIIALGK-GFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLR 180
           SHLCTNVGDMDKLFSSII LGK GFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLR
Sbjct: 121 SHLCTNVGDMDKLFSSIITLGKAGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLR 180

Query: 181 SNDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRSTK 240
           SNDSVSST WLVHEDLHEEKVIAA EYMSSIVATLEALTP PY SRSN+DNSYLE RSTK
Sbjct: 181 SNDSVSSTFWLVHEDLHEEKVIAALEYMSSIVATLEALTPPPYESRSNVDNSYLERRSTK 240

Query: 241 GRFHVRMKRRNGRVRVISEDFNVEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKERN 300
           GRFHVR+KRRNGRVRVISEDFNVE SGIKFTSISSEDAVINQ LIPKVQFNLQLSEKE N
Sbjct: 241 GRFHVRIKRRNGRVRVISEDFNVELSGIKFTSISSEDAVINQVLIPKVQFNLQLSEKELN 300

Query: 301 DRARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNTPLMTNEKGNDDGSGKGEIVYFRDSD 360
           DRARVVLPFEHQGTGKPIQIYDGRRS SESKDDN PLM+NEKGNDDG GKGEIVYFRDSD
Sbjct: 301 DRARVVLPFEHQGTGKPIQIYDGRRSLSESKDDNIPLMSNEKGNDDGWGKGEIVYFRDSD 360

Query: 361 DEMPDSDEDPDDDLDI 376
           DEMPDSDEDPDDDLDI
Sbjct: 361 DEMPDSDEDPDDDLDI 376

BLAST of CsaV3_3G020280 vs. TrEMBL
Match: tr|M5X5C8|M5X5C8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G142900 PE=4 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 2.3e-132
Identity = 247/379 (65.17%), Postives = 301/379 (79.42%), Query Frame = 0

Query: 1   MAESICRALRDGALQGELAPALTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60
           MAE +CRALRDGAL+GE APALTIKD+I +P GF AF HVL+QLS+NI A KSQSR LVL
Sbjct: 1   MAEWVCRALRDGALEGEHAPALTIKDSIATPLGFDAFCHVLSQLSTNISAEKSQSRALVL 60

Query: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120
           ++FSRSP+YYV LLK+RGLD+ SS +WI+ILDCYTDPLGW++R ME  +  N+  E SN+
Sbjct: 61  VAFSRSPSYYVDLLKRRGLDISSSQQWIRILDCYTDPLGWRERLMECGSAKNLSYEASNV 120

Query: 121 SHLCTNVGDMDKLFSSIIALGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS 180
           +  C NV D+DKLFSS+I+LGKG VG+G VRF VA+DSV  MLRH+S+S++AGLLS+LR 
Sbjct: 121 ASTCRNVKDVDKLFSSVISLGKGLVGQGKVRFSVAIDSVNEMLRHASLSSVAGLLSNLRC 180

Query: 181 NDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDN-SYLEHRSTK 240
            D +SS  W +H DL EEKV A  EYMSS+VA++E L P     R N +N S +E   TK
Sbjct: 181 CDQISSIFWFLHADLCEEKVTAVIEYMSSMVASIEPLIPFANRHRGNSENLSLVERNFTK 240

Query: 241 GRFHVRMKRRNGRVRVISEDFNVEQSGIKFTSISSEDAV---INQSLIPKVQFNLQLSEK 300
           G+FHVR KRRNGRVRV+ E+ ++ QSGI FTS SSED +   +NQ L+PKVQFNLQLSEK
Sbjct: 241 GKFHVRCKRRNGRVRVMFEEIHIGQSGIDFTSPSSEDGLVNQVNQGLLPKVQFNLQLSEK 300

Query: 301 ERNDRARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNTPLMTNEKGNDDGSGKGEIVYFR 360
           ERNDRA+VVLPFEHQG GKP++IYDGR+S  +SK++  P+ T     +D S KGEI+YFR
Sbjct: 301 ERNDRAKVVLPFEHQGNGKPVEIYDGRKSLLDSKNEAAPVSTGNSKINDDSSKGEIIYFR 360

Query: 361 DSDDEMPDSDEDPDDDLDI 376
           DSDDEMPDSDEDPDDDLDI
Sbjct: 361 DSDDEMPDSDEDPDDDLDI 379

BLAST of CsaV3_3G020280 vs. TrEMBL
Match: tr|A0A061EPE2|A0A061EPE2_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_019438 PE=4 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 2.1e-125
Identity = 243/378 (64.29%), Postives = 297/378 (78.57%), Query Frame = 0

Query: 1   MAESICRALRDGALQGELAPALTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60
           MAESICRALRDGAL+GE APALTIKD+I SPFGFH F HVL+QLSS ILAGKSQS GLV+
Sbjct: 1   MAESICRALRDGALEGEHAPALTIKDSIASPFGFHVFCHVLSQLSSFILAGKSQSGGLVV 60

Query: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120
           +SFSRSP++Y++LLK +G+DV SS K IQILDCY+DPLGWK R +E  N + +  E SN 
Sbjct: 61  VSFSRSPSFYLELLKNKGIDVVSSDKRIQILDCYSDPLGWKDRLIEAGNFTALSHEASNS 120

Query: 121 S--HLCTNVGDMDKLFSSIIALGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSL 180
           S  ++  +V  MDKL++SI+  GKG +G G  RF VA+DSV  M RH+S S++AGLLS+L
Sbjct: 121 STANVLKDVKHMDKLYNSIVERGKGLIGGGKNRFSVAIDSVDEMSRHASTSSVAGLLSNL 180

Query: 181 RSNDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDN-SYLEHRS 240
           RS+D VSS  WL+H DLHE +V A  EY+SS+V +LE L       R +++N S +EH  
Sbjct: 181 RSHDQVSSIFWLLHSDLHEARVAAVLEYLSSMVTSLEPLHQPANGHRGDLENLSLIEHNL 240

Query: 241 TKGRFHVRMKRRNGRVRVISEDFNVEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKE 300
            KG+FHVR+KRRNGRVRV+SE+ ++EQSGI FTS+SSE A INQ L+PKVQF+L+LSEKE
Sbjct: 241 KKGKFHVRIKRRNGRVRVMSEEVHIEQSGISFTSLSSEGA-INQGLVPKVQFSLELSEKE 300

Query: 301 RNDRARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNTPLMTNEKGNDDGSGKGEIVYFRD 360
           R DRA VVLPFEHQG GKPIQIYDGRRS ++SK +     T +   ++ SG GEI+YFRD
Sbjct: 301 RIDRANVVLPFEHQGNGKPIQIYDGRRSLADSKHERQVAATEKVQTNEDSGGGEIIYFRD 360

Query: 361 SDDEMPDSDEDPDDDLDI 376
           SDDEMPDSDEDPDDDLDI
Sbjct: 361 SDDEMPDSDEDPDDDLDI 377

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004145651.15.6e-207100.00PREDICTED: elongator complex protein 5 isoform X2 [Cucumis sativus] >KGN57713.1 ... [more]
XP_011651354.11.4e-20599.73PREDICTED: elongator complex protein 5 isoform X1 [Cucumis sativus][more]
XP_008461560.13.4e-19695.47PREDICTED: elongator complex protein 5 isoform X2 [Cucumis melo][more]
XP_008461558.18.3e-19595.21PREDICTED: elongator complex protein 5 isoform X1 [Cucumis melo] >XP_008461559.1... [more]
XP_022948561.12.8e-17483.47elongator complex protein 5 isoform X2 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT2G18410.13.7e-10456.05FUNCTIONS IN: molecular_function unknown[more]
Match NameE-valueIdentityDescription
sp|F4IQJ2|ELP5_ARATH6.7e-10356.05Elongator complex protein 5 OS=Arabidopsis thaliana OX=3702 GN=ELP5 PE=1 SV=1[more]
sp|A1A5V9|ELP5_DANRE4.2e-0425.00Elongator complex protein 5 OS=Danio rerio OX=7955 GN=elp5 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A0A0L7D4|A0A0A0L7D4_CUCSA3.7e-207100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G258150 PE=4 SV=1[more]
tr|A0A1S3CF06|A0A1S3CF06_CUCME2.2e-19695.47elongator complex protein 5 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500130 P... [more]
tr|A0A1S3CER6|A0A1S3CER6_CUCME5.5e-19595.21elongator complex protein 5 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500130 P... [more]
tr|M5X5C8|M5X5C8_PRUPE2.3e-13265.17Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G142900 PE=4 SV=1[more]
tr|A0A061EPE2|A0A061EPE2_THECC2.1e-12564.29Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_019438 PE=4 ... [more]
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0033588Elongator holoenzyme complex
Vocabulary: Biological Process
TermDefinition
GO:0002098tRNA wobble uridine modification
Vocabulary: INTERPRO
TermDefinition
IPR019519Elp5
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002098 tRNA wobble uridine modification
biological_process GO:0008150 biological_process
cellular_component GO:0033588 Elongator holoenzyme complex
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G020280.1CsaV3_3G020280.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019519Elongator complex protein 5PFAMPF10483Elong_Iki1coord: 149..308
e-value: 2.7E-11
score: 43.4
IPR019519Elongator complex protein 5PANTHERPTHR15641FAMILY NOT NAMEDcoord: 1..375
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 313..375
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 360..375
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 324..359

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G020280CSPI03G20320Wild cucumber (PI 183967)cpicucB144
CsaV3_3G020280CsGy3G020060Cucumber (Gy14) v2cgybcucB117
CsaV3_3G020280MELO3C023751Melon (DHL92) v3.5.1cucmeB249
CsaV3_3G020280Lsi05G004100Bottle gourd (USVL1VR-Ls)cuclsiB231
CsaV3_3G020280MELO3C023751.2Melon (DHL92) v3.6.1cucmedB235
CsaV3_3G020280Bhi01G001432Wax gourdcucwgoB274
The following gene(s) are paralogous to this gene:

None