CSPI03G20320 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G20320
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	AT2G18410-like protein
Location	Chr3 : 16131045 .. 16140655 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTCTAAACCCTAAACCTCTCTCTCTCTCACTTTCAGTGTCTACTCCCTCCCCTTCCCCAGAGTCACATTTCCCTTCCATAAGATCGCACCATTTATATTTCTGAATTTCTTCTTTTGTTTCTTCACAACCTTCTTTCAATTTCTCTAGTTCCAAATTGAGGGTCCAAGTTGTTTCGTAATTCACGACTTCAAGCTCTCAAATCCTTCCCAATAATGGCGGAATCTATTTGCAGAGCACTCAGAGACGGTGCATTACCGGGAGAGCTCGCCCCTTCTCTCACCATAAAGGACAACATCAATTCCCCATTTGGGTTTCATGCATTTTCCCATGTTCTGACGCAGCTCTCGAGCAATATTTTGGCTGGTAAATCGCAGTCTCGGTTAGTTCAATTCCCTTTTAGAGATACTGTTTCGGAAATTGAAATCGTTACCTTTTCCTGTCGTTTTGATTGTTTTGCTTTGCTGGTGTGATTTTGATCTTAGAGGCCTCGTTCTACTTTCGTTCTCTCGAAGTCCGGCGTATTATGTCCAGCTCTTGAAGAAGAGGGGGCTGGATGTTGGGTCGTCTGCTAAATGGTAAAATTATCCTTGCAAAATTTTACATTTTCGCCTGTTTCAGGTTCGAATTATGAGAAATAGGGTTTGATGAAATTGGAAATTTTGGAGATGTTTTCTCTGGCTTCTCTCTATTGATTGATATGGTAAAATTGTTACACAGAAAATCCCTTTAATTTGGAATAAAATAATAAAGAATAAGTGCATAAGAATTTCATAATAATAAAGAATAATTGTTACTCATCTCTTTAGGATTTTTAACACAGCCCATGACCCAAGAGATCCATCTGAGATCAATTTCTTCTTGATCAAAACTTTTTCCAAGAAGCCCCAATCGACTCGATCAAATGCCTTTTCAAGGTCCTATTTGATAGTCCAACCTTGCCTTTTCTTATGCCTACAGTCCTCCACAGCTTCGTTTGCTAGAATAGGATCCAGGATTTGGCGGCCTTCCAAACAGGCACTTTGTGAGGGCGTTATTATACTGGGTATGATTATTTTCATTCTCTCAGAGCACTTTGGTAGTCAATTTGTACAACAAAGCAGTGAGACTTATGGGTCGAAAGTCTCTTACCTTTATTGCATCTTCCTTTTTCTTGATTAGACAAATAAAGTTCTCCTCTACGCACACATTTAGTTTCCATTCTCCTGGAGCTTTGTTTCTTCCCAGTGAATTTATGGCTGCCACAATTTCCAGCAGACTGAATTTTGCAGTGAGCTTTTTATTCTGATCCCCTGAAACTATAGACCAGTCAAAAGTGGAAGGGAAGGTACCTGCACGATCAGATTTCTCATAAAGGTTGCTGTAGAAGTCAAGGATTAAATGCTTAATTTCCGAGAAAGAGGTGGTGAGGATTCCTTGATCACTAACTAGCTTGGGAATCAGACTTCGTTTCTTTTTTGTTGCAAGAAAAGGTTGGAAAAGGCTTGTATTTTCGTCCCCCAATTTCAGCAAATTCAGTTTACTTTTCTGGATTGAATCTCTTTCCTCCCTTCTATGTAGAGCTAGTAGGTCTCTCTTTCTTGGACAGTAACAATAGTTGATCCATGGTGTCCGTCTCTTATTGATCATATTTACTTTCTTCTTGTGCAATGGCCTTTAAAAGGGTTTCTTCTTGATAATTCTGTTCCTTTCTGTGATCTAAGTTCCAAGTTTTTTGCTGGTCCTTGATGCTCCGAAGTTTATTTGATGGTGCAAAGTCCATCCATTCTGGTGGATTGCTCAAGGATAAAGAGTTTTCAATGATTTGGCAGCATTGCTTGTCAAACAACCAGCTGTTACAAAATCTAAAGGGGGAAGGCCCCAATTCGAAAGCCCCTGCTTCTAGTAAAATAAGGAAGTGGTCTGAGGATATCCTTCCTTGTTGGTTTACTCTTGTGTTCGCAAATGCCTCGTCCCAGTTAAAAGAAACTGAGAATCTGTCCAGCAAGGATGTCAAAGCTGTTCTTCCTTCTCTTGACCATGTAAACTTCCCATTCAATAAAGGAACTTCAATGAGTTTTGAGTCATCAATGAATGAGTTTCCTCCGCCACGTGTTGATCATCCTTTTGGAGAGCGCTCTCCCCCTGATCTGGTCATACTAAATTTCCCTCTCAAACACCAAACTTTTGTGCAATACCCACCAAGGGAAAGTAACTCTGGACATATGAAATTCCTCTCTCTGTAGTCTGTTGGTCCATATATGTTGGTTACCCAGCACAACTTATTACACCATGTTTAGGATTTAATTAATAACGAGAAGCCCCCTTTTGAAACATCAATGACATAAAGTTTGCTTTTGGCCCACGTAGTCAATAAACTCCCGACTTCCATGAGCTTCAAGAAATGTCCATCCAATACCCTTCGAACTCCATAGTGCTTTGATCAGGTTGATGTCAATCTCCTCTTGTTTGGTTTCCTGAACCAAGACCAGGTCTGGATTGGTGTTTTTAGGCAATCTTTTAATGGCCAATTGTTTAGGCTGATCTAGGATTCCTCTGGTGTTCCGGGATAGTATTTTGATGGGGCACATCCTCTATCTGTGTTATATCTCTGACAATTTGACGCAAGCTAATCAGAACCAAGGAAATCTATTCCTCTCCCTCTTCACGTTGCGCCTCTGTTTCCCCTGTACATAAATCATCTCCTGGTAATAAATCTTCACTGCTGATACTGAACACTGAATCTTCATTATCAGACCCTTCATTTACTGCTCTTGAAATTGTTGAGGTAGGAATACATTGCACAAAGTCACAATTTGTGCCTGGGATTTTAAATGGGGAAAATTGAACTTTTGAAGGAGGGGAGGAGCTAACTGACCTATAACAAGTAAAATTGGGAGTAAGGAGCTTCACACAACTTTCTTCCATTAAGTCTGAGTTTGCCAAAGCTGTCCTTTAGGGTTGGACAAAATTGGAAATTTGGGAGAAGTTTCTTCTGTCTTTTCTCTATTGATTGATATGGTAAAACTGTTACCATTTATACACAGAAAATCCCTTTAATTTGGGATAAAATAATAAAGAATAAATGCATAATAATTTCATGATAATACAGATGGAGGACAACCATTGGCTGAGGTAAAAATTCTTTTGAACAACCTTTTAACAGACGGAAGCTTCTGGAATATAGTGATGTGGTTTGCCAGATTTGTGACTCATTGGCAGAATGGCATAATGTGATGACTTGTTTGCAAGTCAGCTTTACAATTCTCCCTTACAATGAGTCGCAAGTTGTTAATTTATATTTATTGGGAAATTGTCTTTAAATTTACTTTTGTTTCCTCCAATTTTCATTTCTATTGATTTTGATGTTTGAGTTCTTTGTTGAATTACAAAAAACAAATCTAAAATTACTTCATTTTTTCAGTTCTAAAAATTGGCGTGGTTTTTGTAATAATTTTTAAAAATATAGTTGTCATGTTTTCTCTAACTTTCACGTTCAGAAATTAGCACGAGACTTAACAAGTAGATTATATCAATATTAATCAATTAAGGTGAAACTGACACCACAAAGTAGCAACAACTTTTGTTCCTCATCAAGAGAGATGTTATGAATCTTGATATTCTGAGAACTAACTTGCATTTATCATTGGAAAAAATAATATACCTTCACATTTCATATCAATTATTTCTCTTTACTGATATTTTTTATTTGCAAGTTCATTTGACCTTATTTGTATTATAGGATTCAAATTTTGGACTGTTATACAGATCCTCTTGGTTGGAAACAACGGTTTATGGAGGGTGAAAACGTTTCAAATGTTGACCAAGAAGTTTCAAATTTATCTCATCTTTGTACAAATGTGGGGGATATGGATAAACTCTTCTCTTCAATTATTGCACTCGGAAAAGGTGCCACTATAATCGTAATTATGAGTATAGTTTATGATTTTCTGGCCTAGGAAAAGGTTACAAGTTAAAATTCGATTTTCTAGCAGGATTTGTTGGAGAAGGAACTGTACGCTTTTGTGTCGCCGTAGACTCTGTATGGACTCTCTCTTTCATGACATATGATATTTTAGATGTGCCAATTACATCCCACAATTTCTTATACCATCCTTTGAATTTTTTTTTCTTGTGCTTATTACCCATTAAAAATAATTAAGGATATCAAGCTGTCAAGGAGTATTACAATTATGGATATTTCTTTTCTCCTACATATTATTTGTTGAATATAGTTAAGTAAGATGTTTAAATTTTGGGGGAAATATCAATTTATACTCCTCAACTTTGGGTTTTTTATCAATAAAAGCTTTAGACTATTTAAGGGTGTTTGGTAGTGGAATAGTCAGGATTAGTGGAAATTTAAGAGGTGTTGGAATTCGTGAGAAATAAACGGTGGAACAGAAATGAAATTGTGAAGCATAAAAACGGTGAAAAAGAGGTTTGGATTAAAATCAGTCGGAATGAAATGAGTTTGGTCTTGCAAATCGATCCGAAAATGCTCAATCAAAACATCAGGCCCAAAACACATTCTAGTTAAATTTTAAGACTATCAAGGAGTACTCTCCTTTCTAGATTGTGTGTTGAATGATGGTACTTTCTTTCTTGGTTGGAAGTAAGAAATATAAATCTTCAAGTTAGTGGGCTTGGCTCAAGGTGGGATTTAACCTAATTTCCTTTCCTTTTTTATCATAAACATGTTGTTTATTTATTACCCCCTTGTATCTTTTGTTAACAAGAGAAATTAATAAGAAAGTCAGATCGTGGTTTTATTTCTGGTACTTGGGTTTTCACGTAACTTGGTGTCTATTTTATTTGCTGCTTTTAACCCAAATAGAGAAAGACGAGATAGCCGCTGCCGTCGGGATCATCACCGCTGTGGATGTTGCTATTGCTGCCACCATGGAAAAGTTGCTCCACCAGCTTCAGAAGCTGCTGGTGATCACAATGGGCCCATCCTCGGAGTCAACTGCATCGCCTAATGGAGGGAAAGAGCCACACGTGCCACATTTGTCCGCCCACACACTGCTGCCCCCAGTCTCCACAATTCAGCTGTCATACTCCCAACCATGGCCTTCTGTCCAGTCGCAGCACCCTCTTTGTCAGTCGCACTTCCACGCAGCACCGCTGCCCTCATTTCATGTGTTACCCTCTTTCATGCATCGCTGCATTTTGATCCTTTATTGCAGTCGCACTTCAATGGTACTGGGATTGATCAACTCCATGATAAATCAAGGTTTGAAGTTGGTGAATCTTCGACACAATCAAAACCAACCGACTTGTCGATGTATTCCAAGAATCTAGTAACCTCGTTCTCTACTTTGTTCTCAAATTATATAACTAGTTCTCTGACACCATGTATAGGTGTCTTTTCAGGAGAGAAGCTGAAGGGCTAGAACTATTTTTCCTGGTCTCAAATATTCAAAATGTTTTTTGAGGGAGGCACCAATTTGATTTTTTGACAAGGGAGACTCCTTGTGATGCCCAAGAACATTTTTGGAGAGAAGAGGACTTTCTTGTTCGGTCCATGTTGATTAATAGTATGAAATCACGAATTGACAAGCCTTTGCTTTATGCAGCAACTGCGAAGGATCTATGGGACACTACTCAAGAACTCTATTCGAAGTTGTCTGTATACATTGAGGAAACAAGTCCATGATTGCTAGCAAGGAACTCTGAATGTTACCTTCTACTTCAATGAACTTTTCCAACTTTGGCAAGAGATGGACTTGTACAGTGAGACACTATGAGATACTTCAAATGATAGAATACAATTTGCTAGACTCGAAGAAGCTTATTGGATTTATTATTTCCTTGCAGGTCTCAACCCAAAGTTTGACATTGTTTGTGGTCGTATACTGGGCTAGAAACCCCTTTCCTCCTTAATGGAAGTGTTATGAAGTCCGTCTTGAAGAAGACCGTACAAGTGTCATGAATGTTCTGACTACTCTTGCTACTGACTTCGTTGCCTTCAGTGCTAGATCCTCTATGCATGATAGTGAGGAGGACAAGAGGAAACTAGTCCCTATCTGTAAGCATTGCAAGAAACAATGGTATACTAAGGATCGGTGTTGGAAACTTTATGGTTGTCTTCTAGTAGGTAAGAAATGTTCTCAAATGATATATAGAATTTAGGACATGCTTATACGGGTGAATTTGCTGGAACATCTCAACCATCCAACCCTACGGTAAACTAGACTGGTCCCAGTCCACCCTCTACTCTATGAGCCAAAGTGACATTGCTCAGTCATGTATGCCTTAAACCCTTAGTCTTACTAGTGTCGATGAGAAGAATCCCTGGATCTTAGAGTCTGGTGCTACAGATCACTTGACAGGTTTCTCTGAAAATTTTGTTTCTTATATTTCATGTGCTAGTAATGAAAAGATCAGAATAGTCGATCGTTCCTTGGCTCCAATTGTTGGGAAGGGGCAAATTTTCCCCTTTGAGGGGCTATCCCTAAAAAATGTGTTGCATGTGCCTAAGATTTCCTATAATTTGCTATCTATAAGCAAGATCACTCGTGAGCTGAACTGGAAAGCTACTTTCTTACCTGATTATGTTTCTTTTTAGGACTTAAGCTCGAGGAGGACGATTGACACTAGACTCTACCTCCTTGATGATGATACTTTCGCTAGCAGTATTCCTAGGAATAGTTTACTGTCTTCATATTTTACTATTTTTGAACAAGATTGTATGTTATGGCATTTTCGGTTGGGCCATCCAAATTTTCAATATATGAAGTATTTATTTCCCTATCTCTTATCTAATGTTGATATCTCCTCTTTATCTTGTGATGTGCGTATTAAAGCCAAATAGCATCGAGTTTCCTTTCTGCCACAGCCATATAAGCCAACTCAACCTTTCACCCTTATTCATAGCGATGTTTGGGGTCCCTCAAAGGTCACTCCTCTTCTGAAAAACGATGGTTTGTAACCTTTATTGATGATCATACCCGTCTTTCATGGGTCTTCCTTATCATTGATAAATCCAAGGTCTCCTTTGTCTTCTAGAACTTCTATCACACAGTAGCAACGCAGTTCAATACAAAAATTGCAATTCTTCGGAGTAATAATGGTCGTGAGTTTCAAAACCATACCCCTAGTGAGTTTATGTTCTCCAAAGGGATTGTCCACTTGAGCTTGTGTGCTTACACCCCCAACAAAATGGGGTTGTTGAGCGAAAAAACTGTCATCTTCTGGAAGTAGCCCATTCTCTTATGTTGTCTACTTCTCTTCCTAATTATTTGTGGGGTGATGTCGTTCTTACTGCAGCCTATCTCATCAATAGAATGTCTTCTCGTGTCCCGCCCAGTGTTTTAAAAGACTCACTAAGGGGCACGCCTAGGTTCAAGTCGTGCAGATGGAGCTTATTTGTGAAGAAGCAAGGCGTTTTCACTAAAGCCCGGCTTAGGCGTGCGCCTTGCTTGAGGGAAAGCTGATTTACTTGTCACATACTTGACCAAATATCTCCTATGCTGTGAATGCCATTAACCAGTTTATGCAGGCTCTGTATGAGGAACACATGGAGACAGTTAACAGAATCTTGAGGTACTTAAAATCAACCCTTGGTAAAGGGTTGATGTTCTAGAAGATCGATAGGAGAGCTATTGAAGCCAATATTGGTTTTGACCAGTGTTTTAAAAAGCGCCCTAAGGCGCGCGCCTAGGCTATTTATCATAAATATGATGTCTATTTATTTCCCTTGTATCTTTTCTTAATAAGAGAAATTAATGAAAAGATTAGATCATGGTTTTTCTCCTAGTACTCGGGTTTCTATGTAACTCGGTGTTTCTTTACCACTTTTAATAATAAACAATGTGAATTATCTGTTGAGTTGTTTTCATTTTTAGTTAAGTGCTCGTCAGATTCTCTAGGTATTAGTTTCACAAGTTGTATATCTGTTCCGTAGATTTTTGCTCACTTTTTTATTTTTTATTATTCGTTAGTAATCTGAATATTTCTTTTATTTTCTCGTTATTTAATTTTATGAAATTTTACCAGGTAACCAACATGTTGAGACATTCATCTATATCAGCACTTGCAGGTCTGTTAAGCAGCCTTCGGAGCAATGGTATGGATATAATAATTACCTCCCAAAATTTCTGATGCTGAAATAAATCACATCTCATGAGTTGTGCTTGATATTCTTTCACTTGGTAGCTCTTATTTTGATTGGTCCTGTAACTGTTGTCATGTAATTGTAGATTCGGTTTCAAGTACATTGTGGTTGGTACATGAAGACCTTCATGAGGAAAAGGTTATAGCTGCTTTTGAATATATGTCCTCCATAGTGGCAACACTTGAGGCATTAACTCCGTCGCCATATGTGAGCAGAAGCAATATGGACAATTCCTATCTTGAACACAGATCTACAAAAGGGAGGTTTCATGTGCGGATGAAACGAAGAAATGGACGTGTTCGAGTCATTGTAAATTCTCTTCTCTTTGCAAAACTTTTGGTATTTACATGTAAAACTTTTGGTTGTCCTTGTGTTCACAATGTTCTATTATAGTCCGAAGATTTTACTGTCGAGCAATCAGGCATCAAATTTACATCCATTTCATCTGAAGATGCAGTCATCAATCAAAGCCTTATACCGAAGGTTGGTTTATCTTGATTTTTACTTTCTTTCAATTATTTTCATAATTCTTTTTTCTTTAATCCAAAGTTCAGATTTATCAGAATTGAGTTTCATAGCATTAGGAGTCTTCTTAAATTATGCTGCTTCTAAGTTTAGATGGACAAACATAAAGAACATTTGTTCTTGATATTGGCTGATCTTTCCATAGCTTCTGTAGTCATTGAAACTTCTCTTTCTCATAATTTACATGAATAAAGAACTGATGAATGGACGACTTTCTTCTCTCAGGTGCAGTTCAATCTTCAGTTGTCAGAGAAAGAGCGAAATGACAGGGCCAGAGTTGTTCTTCCTTTTGAGCATCAAGGTTCAACATTTTGACTCTGTCTTTACTTTTCACAAAATAATCCATGGTTAAATTACAAATTCGGTCAATATGATTTTCCTAAAAGTTAGAATGTAGTCCCTATAATAGTTTTGATAAAATCCTCGTGTAGCCCTTGAGAATTTTTACCAAATTATAAAATGACTATGAGAGGCTTTATCTATAACTGCAAGGACTAAATTTTAACTTTCTCTGATCCACCAGGATGAAATCTATAATTTAACCTAATTCTGACCAGAGTTGATCTATTATCTAGATGGATAAATTCTTTTGACACTTTCTTTTTCTTGTTCACTGTCACAACGTTTGGTTTTTATTGTAGGAACTGGTAAACCGATACAAATATACGATGGTCGACGATCTTTTTCTGAAAGCAAAGATGACAATAATACACCTCTCATGACCAATGAGAAAGGCAATGACGATGGATCGGGAAAGGGTGAGATCGTATATTTCCGCGATTCAGATGATGAGATGCCAGATTCTGATGAGGACCCGGACGATGATTTAGACATATAATCTCGACAGTTCATCATGATGTAGGATGTTTTGTATCTTATACACCTGTTTATTATCATTTCGAATTGTTCAATTTCATGTGGAAAGATGTGTCAACAAGCAGCATCTCAAGCACTGATAAAAATCAATGAAGTTCCCCTGTATTTTGG

mRNA sequence

ATGGCGGAATCTATTTGCAGAGCACTCAGAGACGGTGCATTACCGGGAGAGCTCGCCCCTTCTCTCACCATAAAGGACAACATCAATTCCCCATTTGGGTTTCATGCATTTTCCCATGTTCTGACGCAGCTCTCGAGCAATATTTTGGCTGGTAAATCGCAGTCTCGAGGCCTCGTTCTACTTTCGTTCTCTCGAAGTCCGGCGTATTATGTCCAGCTCTTGAAGAAGAGGGGGCTGGATGTTGGGTCGTCTGCTAAATGGATTCAAATTTTGGACTGTTATACAGATCCTCTTGGTTGGAAACAACGGTTTATGGAGGGTGAAAACGTTTCAAATGTTGACCAAGAAGTTTCAAATTTATCTCATCTTTGTACAAATGTGGGGGATATGGATAAACTCTTCTCTTCAATTATTGCACTCGGAAAAGGATTTGTTGGAGAAGGAACTGTACGCTTTTGTGTCGCCGTAGACTCTGTAACCAACATGTTGAGACATTCATCTATATCAGCACTTGCAGGTCTGTTAAGCAGCCTTCGGAGCAATGATTCGGTTTCAAGTACATTGTGGTTGGTACATGAAGACCTTCATGAGGAAAAGGTTATAGCTGCTTTTGAATATATGTCCTCCATAGTGGCAACACTTGAGGCATTAACTCCGTCGCCATATGTGAGCAGAAGCAATATGGACAATTCCTATCTTGAACACAGATCTACAAAAGGGAGGTTTCATGTGCGGATGAAACGAAGAAATGGACGTGTTCGAGTCATTTCCGAAGATTTTACTGTCGAGCAATCAGGCATCAAATTTACATCCATTTCATCTGAAGATGCAGTCATCAATCAAAGCCTTATACCGAAGGTGCAGTTCAATCTTCAGTTGTCAGAGAAAGAGCGAAATGACAGGGCCAGAGTTGTTCTTCCTTTTGAGCATCAAGGAACTGGTAAACCGATACAAATATACGATGGTCGACGATCTTTTTCTGAAAGCAAAGATGACAATAATACACCTCTCATGACCAATGAGAAAGGCAATGACGATGGATCGGGAAAGGGTGAGATCGTATATTTCCGCGATTCAGATGATGAGATGCCAGATTCTGATGAGGACCCGGACGATGATTTAGACATATAA

Coding sequence (CDS)

ATGGCGGAATCTATTTGCAGAGCACTCAGAGACGGTGCATTACCGGGAGAGCTCGCCCCTTCTCTCACCATAAAGGACAACATCAATTCCCCATTTGGGTTTCATGCATTTTCCCATGTTCTGACGCAGCTCTCGAGCAATATTTTGGCTGGTAAATCGCAGTCTCGAGGCCTCGTTCTACTTTCGTTCTCTCGAAGTCCGGCGTATTATGTCCAGCTCTTGAAGAAGAGGGGGCTGGATGTTGGGTCGTCTGCTAAATGGATTCAAATTTTGGACTGTTATACAGATCCTCTTGGTTGGAAACAACGGTTTATGGAGGGTGAAAACGTTTCAAATGTTGACCAAGAAGTTTCAAATTTATCTCATCTTTGTACAAATGTGGGGGATATGGATAAACTCTTCTCTTCAATTATTGCACTCGGAAAAGGATTTGTTGGAGAAGGAACTGTACGCTTTTGTGTCGCCGTAGACTCTGTAACCAACATGTTGAGACATTCATCTATATCAGCACTTGCAGGTCTGTTAAGCAGCCTTCGGAGCAATGATTCGGTTTCAAGTACATTGTGGTTGGTACATGAAGACCTTCATGAGGAAAAGGTTATAGCTGCTTTTGAATATATGTCCTCCATAGTGGCAACACTTGAGGCATTAACTCCGTCGCCATATGTGAGCAGAAGCAATATGGACAATTCCTATCTTGAACACAGATCTACAAAAGGGAGGTTTCATGTGCGGATGAAACGAAGAAATGGACGTGTTCGAGTCATTTCCGAAGATTTTACTGTCGAGCAATCAGGCATCAAATTTACATCCATTTCATCTGAAGATGCAGTCATCAATCAAAGCCTTATACCGAAGGTGCAGTTCAATCTTCAGTTGTCAGAGAAAGAGCGAAATGACAGGGCCAGAGTTGTTCTTCCTTTTGAGCATCAAGGAACTGGTAAACCGATACAAATATACGATGGTCGACGATCTTTTTCTGAAAGCAAAGATGACAATAATACACCTCTCATGACCAATGAGAAAGGCAATGACGATGGATCGGGAAAGGGTGAGATCGTATATTTCCGCGATTCAGATGATGAGATGCCAGATTCTGATGAGGACCCGGACGATGATTTAGACATATAA

Homology

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BLAST of CSPI03G20320 vs. Swiss-Prot
Match: ELP5_ARATH (Elongator complex protein 5 OS=Arabidopsis thaliana GN=ELP5 PE=1 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 2.4e-105
Identity = 218/381 (57.22%), Postives = 275/381 (72.18%), Query Frame = 1


Query: 1   MAESICRALRDGALPGELAPSLTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60
           MAESI R LRDG   GELAP+LTI++ + SPFG     ++LT LSS+ILAGKS S+GLVL
Sbjct: 1   MAESIFRKLRDGGEEGELAPALTIEETVASPFGLDVSGYLLTNLSSSILAGKSSSQGLVL 60

Query: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120
           ++FSRSP++Y+QLLK++G+ V SS+KWI+ILDCYTDPLGW       +  S    E S+L
Sbjct: 61  ITFSRSPSFYLQLLKQKGIVVSSSSKWIRILDCYTDPLGWI------DQSSTSFSEGSSL 120

Query: 121 SHLCTNVGDMDKLFSSIIALGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS 180
             L   V D+ KLFSSII  G+  VG G  RFCVA+DSV  +LRHS++  ++GLL+ LRS
Sbjct: 121 IKLHKCVSDLKKLFSSIIEAGRELVGTGKTRFCVAIDSVNELLRHSAMPLVSGLLTDLRS 180

Query: 181 NDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRS-TK 240
           +  +SS  W ++ DLH+EKV  A EY+S++ A LE L PS    R+ ++N +  H+   K
Sbjct: 181 HAQISSVFWSLNTDLHQEKVTNALEYISTMKANLEPLCPSSDGQRNALENLFSVHQDFGK 240

Query: 241 GRFHVRMKRRNGRVRVISEDFTVEQSGIKFTSISSEDAVI--NQSLIPKVQFNLQLSEKE 300
           GRFHVR K R GRVRV+SE++ V+QSGI F+ ISS D VI   +SL+PKVQFNLQLSEKE
Sbjct: 241 GRFHVRFKLRKGRVRVMSEEYHVDQSGINFSPISSVDTVIAATKSLLPKVQFNLQLSEKE 300

Query: 301 RNDRARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNNTPLMTNEKGND-DGSGK-GEIVY 360
           R ++ +VVLPFEHQ  GK  +IYDGRRS  + K +  TPL + E   D   SGK GEI+Y
Sbjct: 301 RVEKEKVVLPFEHQDDGKSNEIYDGRRSLVDGKIE-TTPLSSMELQTDVVSSGKGGEIIY 360

Query: 361 FRDSDDEMPDSDEDPDDDLDI 377
           FRDSDDE PDSDEDPDDDLDI
Sbjct: 361 FRDSDDEHPDSDEDPDDDLDI 374

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BLAST of CSPI03G20320 vs. Swiss-Prot
Match: ELP5_DANRE (Elongator complex protein 5 OS=Danio rerio GN=elp5 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 4.4e-06
Identity = 75/304 (24.67%), Postives = 120/304 (39.47%), Query Frame = 1


Query: 78  GLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNLSHLCTNVGDMDKLFSSI 137
           GLD  S A+ +     + DPLGW+     G++   V Q  S   H+   + D     +S+
Sbjct: 58  GLD-SSFAQKLHFHKGFPDPLGWR-----GKSSFTVQQFTSQ--HITQLIRDSQPAKASV 117

Query: 138 IALGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRSNDSVSSTLWLVHEDLHE 197
           +                 VDS++ +LRH     +   L  LR    V + + L+H DLH 
Sbjct: 118 LV----------------VDSLSLVLRHHDPVIVCQSLQELRKGGVVKTIIGLLHSDLHL 177

Query: 198 EKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRSTKGRFHVRMKRRNGRVRVIS 257
           + ++    +++S V           +S +  +N      +T  R       +      +S
Sbjct: 178 QGIVGIVCHLASTV-----------ISVAPTNNERHAVATTTRRTKSGKVMQEEEYFSVS 237

Query: 258 EDFT--VEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKERNDRARVVLPFEHQGTGK 317
           ED T  V+    +   +  E           + FNL+LSE+ER  + +V LPF       
Sbjct: 238 EDATLSVQSKPRQHDRVEKEQDSAEVDPASNLTFNLRLSEEERRAKEKVALPFV------ 296

Query: 318 PIQIYDGRRSFSESKDD---NNTPLMTNEKGNDDGSGKGEIVYFRDSDDEMPDSDEDPDD 377
                     FS+ K       TP            G G I+Y  D++D+    +EDPDD
Sbjct: 298 ----------FSQEKKSALLRPTP------------GSGRIMYEPDANDDF--DEEDPDD 296

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BLAST of CSPI03G20320 vs. TrEMBL
Match: A0A0A0L7D4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G258150 PE=4 SV=1)

HSP 1 Score: 719.2 bits (1855), Expect = 2.7e-204
Identity = 372/376 (98.94%), Postives = 373/376 (99.20%), Query Frame = 1


Query: 1   MAESICRALRDGALPGELAPSLTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60
           MAESICRALRDGAL GELAP+LTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL
Sbjct: 1   MAESICRALRDGALQGELAPALTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60

Query: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120
           LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL
Sbjct: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120

Query: 121 SHLCTNVGDMDKLFSSIIALGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS 180
           SHLCTNVGDMDKLFSSIIALGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS
Sbjct: 121 SHLCTNVGDMDKLFSSIIALGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS 180

Query: 181 NDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRSTKG 240
           NDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRSTKG
Sbjct: 181 NDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRSTKG 240

Query: 241 RFHVRMKRRNGRVRVISEDFTVEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKERND 300
           RFHVRMKRRNGRVRVISEDF VEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKERND
Sbjct: 241 RFHVRMKRRNGRVRVISEDFNVEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKERND 300

Query: 301 RARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNNTPLMTNEKGNDDGSGKGEIVYFRDSD 360
           RARVVLPFEHQGTGKPIQIYDGRRSFSESKDD NTPLMTNEKGNDDGSGKGEIVYFRDSD
Sbjct: 301 RARVVLPFEHQGTGKPIQIYDGRRSFSESKDD-NTPLMTNEKGNDDGSGKGEIVYFRDSD 360

Query: 361 DEMPDSDEDPDDDLDI 377
           DEMPDSDEDPDDDLDI
Sbjct: 361 DEMPDSDEDPDDDLDI 375

[Close]

BLAST of CSPI03G20320 vs. TrEMBL
Match: M5X5C8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007160mg PE=4 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 2.0e-130
Identity = 248/380 (65.26%), Postives = 299/380 (78.68%), Query Frame = 1


Query: 1   MAESICRALRDGALPGELAPSLTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60
           MAE +CRALRDGAL GE AP+LTIKD+I +P GF AF HVL+QLS+NI A KSQSR LVL
Sbjct: 1   MAEWVCRALRDGALEGEHAPALTIKDSIATPLGFDAFCHVLSQLSTNISAEKSQSRALVL 60

Query: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120
           ++FSRSP+YYV LLK+RGLD+ SS +WI+ILDCYTDPLGW++R ME  +  N+  E SN+
Sbjct: 61  VAFSRSPSYYVDLLKRRGLDISSSQQWIRILDCYTDPLGWRERLMECGSAKNLSYEASNV 120

Query: 121 SHLCTNVGDMDKLFSSIIALGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS 180
           +  C NV D+DKLFSS+I+LGKG VG+G VRF VA+DSV  MLRH+S+S++AGLLS+LR 
Sbjct: 121 ASTCRNVKDVDKLFSSVISLGKGLVGQGKVRFSVAIDSVNEMLRHASLSSVAGLLSNLRC 180

Query: 181 NDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDN-SYLEHRSTK 240
            D +SS  W +H DL EEKV A  EYMSS+VA++E L P     R N +N S +E   TK
Sbjct: 181 CDQISSIFWFLHADLCEEKVTAVIEYMSSMVASIEPLIPFANRHRGNSENLSLVERNFTK 240

Query: 241 GRFHVRMKRRNGRVRVISEDFTVEQSGIKFTSISSEDAV---INQSLIPKVQFNLQLSEK 300
           G+FHVR KRRNGRVRV+ E+  + QSGI FTS SSED +   +NQ L+PKVQFNLQLSEK
Sbjct: 241 GKFHVRCKRRNGRVRVMFEEIHIGQSGIDFTSPSSEDGLVNQVNQGLLPKVQFNLQLSEK 300

Query: 301 ERNDRARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNNTPLMTNEKGNDDGSGKGEIVYF 360
           ERNDRA+VVLPFEHQG GKP++IYDGR+S  +SK++       N K NDD S KGEI+YF
Sbjct: 301 ERNDRAKVVLPFEHQGNGKPVEIYDGRKSLLDSKNEAAPVSTGNSKINDD-SSKGEIIYF 360

Query: 361 RDSDDEMPDSDEDPDDDLDI 377
           RDSDDEMPDSDEDPDDDLDI
Sbjct: 361 RDSDDEMPDSDEDPDDDLDI 379

[Close]

BLAST of CSPI03G20320 vs. TrEMBL
Match: W9S8V5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_027044 PE=4 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 1.5e-125
Identity = 240/377 (63.66%), Postives = 292/377 (77.45%), Query Frame = 1


Query: 1   MAESICRALRDGALPGELAPSLTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60
           MA+SICRALRDGAL GE AP+LTIKDNI SPFGF  FSHVL+QLSSNILAGKSQSRGLVL
Sbjct: 1   MADSICRALRDGALEGEHAPALTIKDNIASPFGFDVFSHVLSQLSSNILAGKSQSRGLVL 60

Query: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120
           ++F RSP++YV  LK++G+D+ SS KWIQILDCY+DPLGWK  F           E SN+
Sbjct: 61  VAFRRSPSFYVDFLKRKGVDISSSHKWIQILDCYSDPLGWKDGF---------SLETSNV 120

Query: 121 SHLCTNVGDMDKLFSSIIALGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS 180
           +  C NV D+ KL S+II LG+G VG+G VRF  A+DSV+ M+RH+S+S+++GLLS+LRS
Sbjct: 121 ASSCKNVKDVHKLLSTIIELGQGLVGQGKVRFSAAIDSVSEMVRHASVSSVSGLLSNLRS 180

Query: 181 NDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDN-SYLEHRSTK 240
           +D VSS  WL+H DLHE++V AAFEY+S++VA++E L       RSNM+    LE    K
Sbjct: 181 HDQVSSIFWLLHSDLHEDRVTAAFEYLSTMVASVEPLNQFGNGQRSNMNTFPLLEQSFAK 240

Query: 241 GRFHVRMKRRNGRVRVISEDFTVEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKERN 300
           G+FHVR KRRNGRVRV  E+  VEQS + FTS+SS++ +IN+ LIPKVQFNLQLSEKER 
Sbjct: 241 GKFHVRFKRRNGRVRVACEEVRVEQSDVNFTSVSSDNGMINEGLIPKVQFNLQLSEKERI 300

Query: 301 DRARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNNTPLMTNEKGNDDGSGKGEIVYFRDS 360
           DRA VVLPFEHQG GKPIQIYDGRRS  ++K  N    ++  K   + S KGEI+YFRDS
Sbjct: 301 DRANVVLPFEHQGNGKPIQIYDGRRSLMDTK--NEITSVSTGKSETNDSSKGEIIYFRDS 360

Query: 361 DDEMPDSDEDPDDDLDI 377
           +DEMPDSDEDPD DLDI
Sbjct: 361 EDEMPDSDEDPDYDLDI 366

[Close]

BLAST of CSPI03G20320 vs. TrEMBL
Match: A0A061EPE2_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_019438 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 3.6e-124
Identity = 243/379 (64.12%), Postives = 295/379 (77.84%), Query Frame = 1


Query: 1   MAESICRALRDGALPGELAPSLTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60
           MAESICRALRDGAL GE AP+LTIKD+I SPFGFH F HVL+QLSS ILAGKSQS GLV+
Sbjct: 1   MAESICRALRDGALEGEHAPALTIKDSIASPFGFHVFCHVLSQLSSFILAGKSQSGGLVV 60

Query: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120
           +SFSRSP++Y++LLK +G+DV SS K IQILDCY+DPLGWK R +E  N + +  E SN 
Sbjct: 61  VSFSRSPSFYLELLKNKGIDVVSSDKRIQILDCYSDPLGWKDRLIEAGNFTALSHEASNS 120

Query: 121 S--HLCTNVGDMDKLFSSIIALGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSL 180
           S  ++  +V  MDKL++SI+  GKG +G G  RF VA+DSV  M RH+S S++AGLLS+L
Sbjct: 121 STANVLKDVKHMDKLYNSIVERGKGLIGGGKNRFSVAIDSVDEMSRHASTSSVAGLLSNL 180

Query: 181 RSNDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDN-SYLEHRS 240
           RS+D VSS  WL+H DLHE +V A  EY+SS+V +LE L       R +++N S +EH  
Sbjct: 181 RSHDQVSSIFWLLHSDLHEARVAAVLEYLSSMVTSLEPLHQPANGHRGDLENLSLIEHNL 240

Query: 241 TKGRFHVRMKRRNGRVRVISEDFTVEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKE 300
            KG+FHVR+KRRNGRVRV+SE+  +EQSGI FTS+SSE A INQ L+PKVQF+L+LSEKE
Sbjct: 241 KKGKFHVRIKRRNGRVRVMSEEVHIEQSGISFTSLSSEGA-INQGLVPKVQFSLELSEKE 300

Query: 301 RNDRARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNNTPLMTNEKGNDDGSGKGEIVYFR 360
           R DRA VVLPFEHQG GKPIQIYDGRRS ++SK +         + N+D SG GEI+YFR
Sbjct: 301 RIDRANVVLPFEHQGNGKPIQIYDGRRSLADSKHERQVAATEKVQTNED-SGGGEIIYFR 360

Query: 361 DSDDEMPDSDEDPDDDLDI 377
           DSDDEMPDSDEDPDDDLDI
Sbjct: 361 DSDDEMPDSDEDPDDDLDI 377

[Close]

BLAST of CSPI03G20320 vs. TrEMBL
Match: V4T392_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011993mg PE=4 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 1.4e-123
Identity = 229/377 (60.74%), Postives = 296/377 (78.51%), Query Frame = 1


Query: 1   MAESICRALRDGALPGELAPSLTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60
           MA++ICR LRDG L GE AP+LTIKD+  SPFGF  F++VLTQLS+ ILAGKSQSRGLV+
Sbjct: 1   MADTICRTLRDGGLEGEHAPALTIKDSKASPFGFDVFNYVLTQLSNYILAGKSQSRGLVV 60

Query: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120
           +++SRSP++YV LLK+RG+D+ SS  WI ILDCYTDPLGWK   ++     ++ QE S+L
Sbjct: 61  VAYSRSPSFYVDLLKRRGIDIASSHDWIHILDCYTDPLGWKNWLID----KDISQEASSL 120

Query: 121 SHLCTNVGDMDKLFSSIIALGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS 180
           S  C +V ++DKL+S II  GKG +G+G  RF +A+DSV+ M+RH+SIS++AG+LS+LRS
Sbjct: 121 SSFCQDVRNLDKLYSLIIEQGKGLIGQGKDRFSIAIDSVSEMVRHASISSVAGILSNLRS 180

Query: 181 NDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDN-SYLEHRSTK 240
           +D VSS  WL+H DLHE K  +  EY+SS+VA++E    + +  R +++N S LE    K
Sbjct: 181 HDQVSSIFWLLHSDLHEIKFTSVLEYLSSMVASVEPFNQAAFGQRVDLENLSMLEQNFRK 240

Query: 241 GRFHVRMKRRNGRVRVISEDFTVEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKERN 300
           G+FHVR KRRNGR+RV+ E+  VE +GIKFT + SED +INQ L+PKVQFNLQLSE+ERN
Sbjct: 241 GKFHVRFKRRNGRIRVMCEEILVELAGIKFTPVLSEDEIINQRLLPKVQFNLQLSEEERN 300

Query: 301 DRARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNNTPLMTNEKGNDDGSGKGEIVYFRDS 360
           +RA+VVLPFEHQG GKPIQIYDGRRS  E+K++    + T +   D+ SGKG+I+YFRDS
Sbjct: 301 ERAKVVLPFEHQGNGKPIQIYDGRRSLGENKEE--ALVSTGKLQPDEDSGKGQIIYFRDS 360

Query: 361 DDEMPDSDEDPDDDLDI 377
           DDEMPDSDEDPDDDLDI
Sbjct: 361 DDEMPDSDEDPDDDLDI 371

[Close]

BLAST of CSPI03G20320 vs. TAIR10
Match: AT2G18410.1 (AT2G18410.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 383.6 bits (984), Expect = 1.4e-106
Identity = 218/381 (57.22%), Postives = 275/381 (72.18%), Query Frame = 1


Query: 1   MAESICRALRDGALPGELAPSLTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60
           MAESI R LRDG   GELAP+LTI++ + SPFG     ++LT LSS+ILAGKS S+GLVL
Sbjct: 1   MAESIFRKLRDGGEEGELAPALTIEETVASPFGLDVSGYLLTNLSSSILAGKSSSQGLVL 60

Query: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120
           ++FSRSP++Y+QLLK++G+ V SS+KWI+ILDCYTDPLGW       +  S    E S+L
Sbjct: 61  ITFSRSPSFYLQLLKQKGIVVSSSSKWIRILDCYTDPLGWI------DQSSTSFSEGSSL 120

Query: 121 SHLCTNVGDMDKLFSSIIALGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS 180
             L   V D+ KLFSSII  G+  VG G  RFCVA+DSV  +LRHS++  ++GLL+ LRS
Sbjct: 121 IKLHKCVSDLKKLFSSIIEAGRELVGTGKTRFCVAIDSVNELLRHSAMPLVSGLLTDLRS 180

Query: 181 NDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRS-TK 240
           +  +SS  W ++ DLH+EKV  A EY+S++ A LE L PS    R+ ++N +  H+   K
Sbjct: 181 HAQISSVFWSLNTDLHQEKVTNALEYISTMKANLEPLCPSSDGQRNALENLFSVHQDFGK 240

Query: 241 GRFHVRMKRRNGRVRVISEDFTVEQSGIKFTSISSEDAVI--NQSLIPKVQFNLQLSEKE 300
           GRFHVR K R GRVRV+SE++ V+QSGI F+ ISS D VI   +SL+PKVQFNLQLSEKE
Sbjct: 241 GRFHVRFKLRKGRVRVMSEEYHVDQSGINFSPISSVDTVIAATKSLLPKVQFNLQLSEKE 300

Query: 301 RNDRARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNNTPLMTNEKGND-DGSGK-GEIVY 360
           R ++ +VVLPFEHQ  GK  +IYDGRRS  + K +  TPL + E   D   SGK GEI+Y
Sbjct: 301 RVEKEKVVLPFEHQDDGKSNEIYDGRRSLVDGKIE-TTPLSSMELQTDVVSSGKGGEIIY 360

Query: 361 FRDSDDEMPDSDEDPDDDLDI 377
           FRDSDDE PDSDEDPDDDLDI
Sbjct: 361 FRDSDDEHPDSDEDPDDDLDI 374

[Close]

BLAST of CSPI03G20320 vs. NCBI nr
Match: gi|449455826|ref|XP_004145651.1| (PREDICTED: elongator complex protein 5 isoform X2 [Cucumis sativus])

HSP 1 Score: 719.2 bits (1855), Expect = 3.9e-204
Identity = 372/376 (98.94%), Postives = 373/376 (99.20%), Query Frame = 1


Query: 1   MAESICRALRDGALPGELAPSLTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60
           MAESICRALRDGAL GELAP+LTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL
Sbjct: 1   MAESICRALRDGALQGELAPALTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60

Query: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120
           LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL
Sbjct: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120

Query: 121 SHLCTNVGDMDKLFSSIIALGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS 180
           SHLCTNVGDMDKLFSSIIALGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS
Sbjct: 121 SHLCTNVGDMDKLFSSIIALGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS 180

Query: 181 NDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRSTKG 240
           NDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRSTKG
Sbjct: 181 NDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRSTKG 240

Query: 241 RFHVRMKRRNGRVRVISEDFTVEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKERND 300
           RFHVRMKRRNGRVRVISEDF VEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKERND
Sbjct: 241 RFHVRMKRRNGRVRVISEDFNVEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKERND 300

Query: 301 RARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNNTPLMTNEKGNDDGSGKGEIVYFRDSD 360
           RARVVLPFEHQGTGKPIQIYDGRRSFSESKDD NTPLMTNEKGNDDGSGKGEIVYFRDSD
Sbjct: 301 RARVVLPFEHQGTGKPIQIYDGRRSFSESKDD-NTPLMTNEKGNDDGSGKGEIVYFRDSD 360

Query: 361 DEMPDSDEDPDDDLDI 377
           DEMPDSDEDPDDDLDI
Sbjct: 361 DEMPDSDEDPDDDLDI 375

[Close]

BLAST of CSPI03G20320 vs. NCBI nr
Match: gi|778680600|ref|XP_011651354.1| (PREDICTED: elongator complex protein 5 isoform X1 [Cucumis sativus])

HSP 1 Score: 714.5 bits (1843), Expect = 9.5e-203
Identity = 372/377 (98.67%), Postives = 373/377 (98.94%), Query Frame = 1


Query: 1   MAESICRALRDGALPGELAPSLTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60
           MAESICRALRDGAL GELAP+LTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL
Sbjct: 1   MAESICRALRDGALQGELAPALTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60

Query: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120
           LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL
Sbjct: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120

Query: 121 SHLCTNVGDMDKLFSSIIALGK-GFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLR 180
           SHLCTNVGDMDKLFSSIIALGK GFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLR
Sbjct: 121 SHLCTNVGDMDKLFSSIIALGKAGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLR 180

Query: 181 SNDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRSTK 240
           SNDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRSTK
Sbjct: 181 SNDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRSTK 240

Query: 241 GRFHVRMKRRNGRVRVISEDFTVEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKERN 300
           GRFHVRMKRRNGRVRVISEDF VEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKERN
Sbjct: 241 GRFHVRMKRRNGRVRVISEDFNVEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKERN 300

Query: 301 DRARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNNTPLMTNEKGNDDGSGKGEIVYFRDS 360
           DRARVVLPFEHQGTGKPIQIYDGRRSFSESKDD NTPLMTNEKGNDDGSGKGEIVYFRDS
Sbjct: 301 DRARVVLPFEHQGTGKPIQIYDGRRSFSESKDD-NTPLMTNEKGNDDGSGKGEIVYFRDS 360

Query: 361 DDEMPDSDEDPDDDLDI 377
           DDEMPDSDEDPDDDLDI
Sbjct: 361 DDEMPDSDEDPDDDLDI 376

[Close]

BLAST of CSPI03G20320 vs. NCBI nr
Match: gi|659123236|ref|XP_008461560.1| (PREDICTED: elongator complex protein 5 isoform X2 [Cucumis melo])

HSP 1 Score: 684.9 bits (1766), Expect = 8.1e-194
Identity = 356/376 (94.68%), Postives = 361/376 (96.01%), Query Frame = 1


Query: 1   MAESICRALRDGALPGELAPSLTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60
           MAESICRALRDGAL GELAP+LTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL
Sbjct: 1   MAESICRALRDGALQGELAPTLTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60

Query: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120
           LSFSRSPAYYVQLLKKRGL+VGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL
Sbjct: 61  LSFSRSPAYYVQLLKKRGLNVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120

Query: 121 SHLCTNVGDMDKLFSSIIALGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS 180
           SHLCTNVGDMDKLFSSII LGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS
Sbjct: 121 SHLCTNVGDMDKLFSSIITLGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS 180

Query: 181 NDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRSTKG 240
           NDSVSST WLVHEDLHEEKVIAA EYMSSIVATLEALTP PY SRSN+DNSYLE RSTKG
Sbjct: 181 NDSVSSTFWLVHEDLHEEKVIAALEYMSSIVATLEALTPPPYESRSNVDNSYLERRSTKG 240

Query: 241 RFHVRMKRRNGRVRVISEDFTVEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKERND 300
           RFHVR+KRRNGRVRVISEDF VE SGIKFTSISSEDAVINQ LIPKVQFNLQLSEKE ND
Sbjct: 241 RFHVRIKRRNGRVRVISEDFNVELSGIKFTSISSEDAVINQVLIPKVQFNLQLSEKELND 300

Query: 301 RARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNNTPLMTNEKGNDDGSGKGEIVYFRDSD 360
           RARVVLPFEHQGTGKPIQIYDGRRS SESKDD N PLM+NEKGNDDG GKGEIVYFRDSD
Sbjct: 301 RARVVLPFEHQGTGKPIQIYDGRRSLSESKDD-NIPLMSNEKGNDDGWGKGEIVYFRDSD 360

Query: 361 DEMPDSDEDPDDDLDI 377
           DEMPDSDEDPDDDLDI
Sbjct: 361 DEMPDSDEDPDDDLDI 375

[Close]

BLAST of CSPI03G20320 vs. NCBI nr
Match: gi|659123232|ref|XP_008461558.1| (PREDICTED: elongator complex protein 5 isoform X1 [Cucumis melo])

HSP 1 Score: 680.2 bits (1754), Expect = 2.0e-192
Identity = 356/377 (94.43%), Postives = 361/377 (95.76%), Query Frame = 1


Query: 1   MAESICRALRDGALPGELAPSLTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60
           MAESICRALRDGAL GELAP+LTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL
Sbjct: 1   MAESICRALRDGALQGELAPTLTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60

Query: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120
           LSFSRSPAYYVQLLKKRGL+VGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL
Sbjct: 61  LSFSRSPAYYVQLLKKRGLNVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120

Query: 121 SHLCTNVGDMDKLFSSIIALGK-GFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLR 180
           SHLCTNVGDMDKLFSSII LGK GFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLR
Sbjct: 121 SHLCTNVGDMDKLFSSIITLGKAGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLR 180

Query: 181 SNDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDNSYLEHRSTK 240
           SNDSVSST WLVHEDLHEEKVIAA EYMSSIVATLEALTP PY SRSN+DNSYLE RSTK
Sbjct: 181 SNDSVSSTFWLVHEDLHEEKVIAALEYMSSIVATLEALTPPPYESRSNVDNSYLERRSTK 240

Query: 241 GRFHVRMKRRNGRVRVISEDFTVEQSGIKFTSISSEDAVINQSLIPKVQFNLQLSEKERN 300
           GRFHVR+KRRNGRVRVISEDF VE SGIKFTSISSEDAVINQ LIPKVQFNLQLSEKE N
Sbjct: 241 GRFHVRIKRRNGRVRVISEDFNVELSGIKFTSISSEDAVINQVLIPKVQFNLQLSEKELN 300

Query: 301 DRARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNNTPLMTNEKGNDDGSGKGEIVYFRDS 360
           DRARVVLPFEHQGTGKPIQIYDGRRS SESKDD N PLM+NEKGNDDG GKGEIVYFRDS
Sbjct: 301 DRARVVLPFEHQGTGKPIQIYDGRRSLSESKDD-NIPLMSNEKGNDDGWGKGEIVYFRDS 360

Query: 361 DDEMPDSDEDPDDDLDI 377
           DDEMPDSDEDPDDDLDI
Sbjct: 361 DDEMPDSDEDPDDDLDI 376

[Close]

BLAST of CSPI03G20320 vs. NCBI nr
Match: gi|595936385|ref|XP_007215534.1| (hypothetical protein PRUPE_ppa007160mg [Prunus persica])

HSP 1 Score: 473.8 bits (1218), Expect = 2.8e-130
Identity = 248/380 (65.26%), Postives = 299/380 (78.68%), Query Frame = 1


Query: 1   MAESICRALRDGALPGELAPSLTIKDNINSPFGFHAFSHVLTQLSSNILAGKSQSRGLVL 60
           MAE +CRALRDGAL GE AP+LTIKD+I +P GF AF HVL+QLS+NI A KSQSR LVL
Sbjct: 1   MAEWVCRALRDGALEGEHAPALTIKDSIATPLGFDAFCHVLSQLSTNISAEKSQSRALVL 60

Query: 61  LSFSRSPAYYVQLLKKRGLDVGSSAKWIQILDCYTDPLGWKQRFMEGENVSNVDQEVSNL 120
           ++FSRSP+YYV LLK+RGLD+ SS +WI+ILDCYTDPLGW++R ME  +  N+  E SN+
Sbjct: 61  VAFSRSPSYYVDLLKRRGLDISSSQQWIRILDCYTDPLGWRERLMECGSAKNLSYEASNV 120

Query: 121 SHLCTNVGDMDKLFSSIIALGKGFVGEGTVRFCVAVDSVTNMLRHSSISALAGLLSSLRS 180
           +  C NV D+DKLFSS+I+LGKG VG+G VRF VA+DSV  MLRH+S+S++AGLLS+LR 
Sbjct: 121 ASTCRNVKDVDKLFSSVISLGKGLVGQGKVRFSVAIDSVNEMLRHASLSSVAGLLSNLRC 180

Query: 181 NDSVSSTLWLVHEDLHEEKVIAAFEYMSSIVATLEALTPSPYVSRSNMDN-SYLEHRSTK 240
            D +SS  W +H DL EEKV A  EYMSS+VA++E L P     R N +N S +E   TK
Sbjct: 181 CDQISSIFWFLHADLCEEKVTAVIEYMSSMVASIEPLIPFANRHRGNSENLSLVERNFTK 240

Query: 241 GRFHVRMKRRNGRVRVISEDFTVEQSGIKFTSISSEDAV---INQSLIPKVQFNLQLSEK 300
           G+FHVR KRRNGRVRV+ E+  + QSGI FTS SSED +   +NQ L+PKVQFNLQLSEK
Sbjct: 241 GKFHVRCKRRNGRVRVMFEEIHIGQSGIDFTSPSSEDGLVNQVNQGLLPKVQFNLQLSEK 300

Query: 301 ERNDRARVVLPFEHQGTGKPIQIYDGRRSFSESKDDNNTPLMTNEKGNDDGSGKGEIVYF 360
           ERNDRA+VVLPFEHQG GKP++IYDGR+S  +SK++       N K NDD S KGEI+YF
Sbjct: 301 ERNDRAKVVLPFEHQGNGKPVEIYDGRKSLLDSKNEAAPVSTGNSKINDD-SSKGEIIYF 360

Query: 361 RDSDDEMPDSDEDPDDDLDI 377
           RDSDDEMPDSDEDPDDDLDI
Sbjct: 361 RDSDDEMPDSDEDPDDDLDI 379

The following BLAST results are available for this feature:

BLAST of CSPI03G20320 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ELP5_ARATH	2.4e-105	57.22	Elongator complex protein 5 OS=Arabidopsis thaliana GN=ELP5 PE=1 SV=1	[more]
ELP5_DANRE	4.4e-06	24.67	Elongator complex protein 5 OS=Danio rerio GN=elp5 PE=2 SV=1	[more]

BLAST of CSPI03G20320 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7D4_CUCSA	2.7e-204	98.94	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G258150 PE=4 SV=1	[more]
M5X5C8_PRUPE	2.0e-130	65.26	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007160mg PE=4 SV=1	[more]
W9S8V5_9ROSA	1.5e-125	63.66	Uncharacterized protein OS=Morus notabilis GN=L484_027044 PE=4 SV=1	[more]
A0A061EPE2_THECC	3.6e-124	64.12	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_019438 PE=4 SV=1	[more]
V4T392_9ROSI	1.4e-123	60.74	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011993mg PE=4 SV=1	[more]

BLAST of CSPI03G20320 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G18410.1	1.4e-106	57.22	FUNCTIONS IN: molecular_function unknown	[more]

BLAST of CSPI03G20320 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449455826\|ref\|XP_004145651.1\|	3.9e-204	98.94	PREDICTED: elongator complex protein 5 isoform X2 [Cucumis sativus]	[more]
gi\|778680600\|ref\|XP_011651354.1\|	9.5e-203	98.67	PREDICTED: elongator complex protein 5 isoform X1 [Cucumis sativus]	[more]
gi\|659123236\|ref\|XP_008461560.1\|	8.1e-194	94.68	PREDICTED: elongator complex protein 5 isoform X2 [Cucumis melo]	[more]
gi\|659123232\|ref\|XP_008461558.1\|	2.0e-192	94.43	PREDICTED: elongator complex protein 5 isoform X1 [Cucumis melo]	[more]
gi\|595936385\|ref\|XP_007215534.1\|	2.8e-130	65.26	hypothetical protein PRUPE_ppa007160mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR019519	Elp5

Vocabulary: **Cellular Component**
Term	Definition
GO:0033588	Elongator holoenzyme complex

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0002098	tRNA wobble uridine modification
cellular_component	GO:0033588	Elongator holoenzyme complex
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G20320.1	CSPI03G20320.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019519	Elongator complex protein 5	PANTHER	PTHR15641	FAMILY NOT NAMED	coord: 1..328 score: 8.8E-96coord: 351..376 score: 8.8
IPR019519	Elongator complex protein 5	PFAM	PF10483	Elong_Iki1	coord: 149..308 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G20320	Csa3G258150	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G20320	MELO3C023751	Melon (DHL92) v3.5.1	cpimeB243
CSPI03G20320	Lsi05G004100	Bottle gourd (USVL1VR-Ls)	cpilsiB210
CSPI03G20320	MELO3C023751.2	Melon (DHL92) v3.6.1	cpimedB229
CSPI03G20320	CsaV3_3G020280	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G20320	Bhi01G001432	Wax gourd	cpiwgoB271
CSPI03G20320	CsGy3G020060	Cucumber (Gy14) v2	cgybcpiB110

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G20320	Watermelon (97103) v2	cpiwmbB224
CSPI03G20320	Cucumber (Gy14) v1	cgycpiB003
CSPI03G20320	Cucurbita maxima (Rimu)	cmacpiB244
CSPI03G20320	Cucurbita maxima (Rimu)	cmacpiB458
CSPI03G20320	Cucurbita moschata (Rifu)	cmocpiB232
CSPI03G20320	Cucurbita moschata (Rifu)	cmocpiB446
CSPI03G20320	Watermelon (Charleston Gray)	cpiwcgB241
CSPI03G20320	Watermelon (97103) v1	cpiwmB246
CSPI03G20320	Cucurbita pepo (Zucchini)	cpecpiB550
CSPI03G20320	Cucurbita pepo (Zucchini)	cpecpiB602
CSPI03G20320	Silver-seed gourd	carcpiB0520
CSPI03G20320	Silver-seed gourd	carcpiB0798