CsaV3_3G020240 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G020240
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Homeobox Hox-B3-like protein
Location	chr3 : 16230438 .. 16231563 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCAGTTGTGGTGAAGTAAGAAGAACGTTAGAAAAGTGAAATGGAAAGCACACAATCTTTTCCCTTCTCTCTCTTTTACACCTTACCCAAATTTCAGACCGTTGCGAAACCAAATTCCCTTTTTCTTTTCAAACCTCACAAAAACACAAAGCACACTCATTATCTCTTCTTCTTCTTCTTCACCTCATTCAATCAAAACCACAAACCTTCCTCACCCTTCAACAATGGCCCACAAATTCCCCCATCTCCCCTTCCACTCCATCGACTCCAGATCCCTCCTCCTCCACCAGAACTCCGCCGCCGACCACCCCATCTCTCTCCACCTCACACCTGAGCCTTTTTCCATGGAAAGAGGCCCAAGGTACAGAGCCTACGCAGAGCTCAGAGAATCCAAGCTCCGCTTGAGAAACGCCATGTATCGCCACGATGAACACCCGGAGAAGTCCACCCCGCCGCCCAAGAAGCAAGTTAAATTTCTGGGTTCGGAGACTGTAAGGAAAAGGTCCGCTACGGTGGCGCAATCGGTGCCGGATTTCTCTGCAGTGCTAAGAAAGGAGAATAGAAAGCCGCCGCCGGGGATGTTGTCGCCAGTGATGGAGATGACGCCCCCGGGGAAGACGTGGGGGAAGAATATTGGGGGATTGTCGACGACTTCGAGGGGGAGTAAGTCCGCGAGTGCAGGGGAGAAAAGGGGCGGCGGATTGACGGCGGTGAGGAAAAGCTACGCCGGATTTGAGGAGCTGAAGGGGTTTTCTACGGCGGCGGCGAACGCCATTAATGGTGAAAATAGGAAAGGAGGGAGGAGAGGGAAGACTGTATTGGGGGTTAGACAAATCTGAATGAAAATAAGAAACAAATTATTGTATTTTCTCGATGGAAGAAGATTGCTCTGTTTATGTGTTACAATGTTTTTTAATTTTTGTTGGTTTTGGTGTTGTTTTTCTAGGATACTTTTGATTCTTTTATTATATAATGGATAATTTGAGTTTGTGGAATAATGAAGTGAGAAGTAAAAGAAAAATGTTGTTATTTGTTCATCTTTGTGTTCATTGATTATACAAGCTTCTTCTAAGTAGAGTTTCAAATCTAATCATTATCTTTTTCCTTTTAATACGAATTTAGTTAC

mRNA sequence

ATGGCCCACAAATTCCCCCATCTCCCCTTCCACTCCATCGACTCCAGATCCCTCCTCCTCCACCAGAACTCCGCCGCCGACCACCCCATCTCTCTCCACCTCACACCTGAGCCTTTTTCCATGGAAAGAGGCCCAAGGTACAGAGCCTACGCAGAGCTCAGAGAATCCAAGCTCCGCTTGAGAAACGCCATGTATCGCCACGATGAACACCCGGAGAAGTCCACCCCGCCGCCCAAGAAGCAAGTTAAATTTCTGGGTTCGGAGACTGTAAGGAAAAGGTCCGCTACGGTGGCGCAATCGGTGCCGGATTTCTCTGCAGTGCTAAGAAAGGAGAATAGAAAGCCGCCGCCGGGGATGTTGTCGCCAGTGATGGAGATGACGCCCCCGGGGAAGACGTGGGGGAAGAATATTGGGGGATTGTCGACGACTTCGAGGGGGAGTAAGTCCGCGAGTGCAGGGGAGAAAAGGGGCGGCGGATTGACGGCGGTGAGGAAAAGCTACGCCGGATTTGAGGAGCTGAAGGGGTTTTCTACGGCGGCGGCGAACGCCATTAATGGTGAAAATAGGAAAGGAGGGAGGAGAGGGAAGACTGTATTGGGGGTTAGACAAATCTGA

Coding sequence (CDS)

ATGGCCCACAAATTCCCCCATCTCCCCTTCCACTCCATCGACTCCAGATCCCTCCTCCTCCACCAGAACTCCGCCGCCGACCACCCCATCTCTCTCCACCTCACACCTGAGCCTTTTTCCATGGAAAGAGGCCCAAGGTACAGAGCCTACGCAGAGCTCAGAGAATCCAAGCTCCGCTTGAGAAACGCCATGTATCGCCACGATGAACACCCGGAGAAGTCCACCCCGCCGCCCAAGAAGCAAGTTAAATTTCTGGGTTCGGAGACTGTAAGGAAAAGGTCCGCTACGGTGGCGCAATCGGTGCCGGATTTCTCTGCAGTGCTAAGAAAGGAGAATAGAAAGCCGCCGCCGGGGATGTTGTCGCCAGTGATGGAGATGACGCCCCCGGGGAAGACGTGGGGGAAGAATATTGGGGGATTGTCGACGACTTCGAGGGGGAGTAAGTCCGCGAGTGCAGGGGAGAAAAGGGGCGGCGGATTGACGGCGGTGAGGAAAAGCTACGCCGGATTTGAGGAGCTGAAGGGGTTTTCTACGGCGGCGGCGAACGCCATTAATGGTGAAAATAGGAAAGGAGGGAGGAGAGGGAAGACTGTATTGGGGGTTAGACAAATCTGA

Protein sequence

MAHKFPHLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRESKLRLRNAMYRHDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGKNIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAAANAINGENRKGGRRGKTVLGVRQI

Homology

[Close]

BLAST of CsaV3_3G020240 vs. NCBI nr
Match: XP_011651352.1 (PREDICTED: uncharacterized protein LOC101205045 [Cucumis sativus] >KGN57709.1 hypothetical protein Csa_3G258110 [Cucumis sativus])

HSP 1 Score: 399.8 bits (1026), Expect = 5.5e-108
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MAHKFPHLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRESKLRL 60
           MAHKFPHLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRESKLRL
Sbjct: 1   MAHKFPHLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRESKLRL 60

Query: 61  RNAMYRHDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGML 120
           RNAMYRHDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGML
Sbjct: 61  RNAMYRHDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGML 120

Query: 121 SPVMEMTPPGKTWGKNIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAA 180
           SPVMEMTPPGKTWGKNIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAA
Sbjct: 121 SPVMEMTPPGKTWGKNIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAA 180

Query: 181 ANAINGENRKGGRRGKTVLGVRQI 205
           ANAINGENRKGGRRGKTVLGVRQI
Sbjct: 181 ANAINGENRKGGRRGKTVLGVRQI 204

[Close]

BLAST of CsaV3_3G020240 vs. NCBI nr
Match: XP_008461547.1 (PREDICTED: uncharacterized protein LOC103500118 [Cucumis melo])

HSP 1 Score: 343.2 bits (879), Expect = 6.1e-91
Identity = 176/188 (93.62%), Postives = 180/188 (95.74%), Query Frame = 0


Query: 1   MAHKFPHLPFHSIDSRSLLLHQNSAA-DHPISLHLTPEPFSMERGPRYRAYAELRESKLR 60
           MA KF HLPFHSIDSRSLLLHQNSAA DHPISLHLTPEPFSMERGPRY+AYAELRESKLR
Sbjct: 1   MADKFHHLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLR 60

Query: 61  LRNAMYRHDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGM 120
            RNAMYRHDEHPEKSTPPPKKQ+KFLGSETVRKR+ATVAQSVPDFSAVLRKENRKPPPGM
Sbjct: 61  FRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRTATVAQSVPDFSAVLRKENRKPPPGM 120

Query: 121 LSPVMEMTPPGKTWGKNIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTA 180
           LSPVMEMTPPGKTWGKN+GGLST SRGSKSASAGEKRGGGLT VRKSYAGFEELKGFSTA
Sbjct: 121 LSPVMEMTPPGKTWGKNMGGLSTNSRGSKSASAGEKRGGGLTTVRKSYAGFEELKGFSTA 180

Query: 181 AANAINGE 188
            A AINGE
Sbjct: 181 TAKAINGE 188

[Close]

BLAST of CsaV3_3G020240 vs. NCBI nr
Match: XP_023524771.1 (uncharacterized protein LOC111788608 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 320.9 bits (821), Expect = 3.2e-84
Identity = 174/202 (86.14%), Postives = 180/202 (89.11%), Query Frame = 0


Query: 7   HLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRESKLRLRNAMYR 66
           HLPFHSID RSLLLHQNSA  H   L LT E FSMERGPRYRAYAELRESKLRLRNAMYR
Sbjct: 12  HLPFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRESKLRLRNAMYR 71

Query: 67  HDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGMLSPVMEM 126
             E PEKSTPP KKQV+F+GSETVRKRSATVAQSVPDFSAVLRKENR+PPPG LSPVMEM
Sbjct: 72  DGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRPPPG-LSPVMEM 131

Query: 127 TPPGKTWGK--NIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAAANAI 186
           TPPGKTWGK  NIGG+S  SRGSKSASAGEKRGGGL A RKSYAGFEELKGFSTAAANAI
Sbjct: 132 TPPGKTWGKNNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELKGFSTAAANAI 191

Query: 187 NGENRK--GGRRGKTVLGVRQI 205
           NGEN++  GGRRGKTVLGVRQI
Sbjct: 192 NGENKRGGGGRRGKTVLGVRQI 212

[Close]

BLAST of CsaV3_3G020240 vs. NCBI nr
Match: XP_022948564.1 (uncharacterized protein LOC111452204 [Cucurbita moschata])

HSP 1 Score: 318.2 bits (814), Expect = 2.1e-83
Identity = 173/201 (86.07%), Postives = 179/201 (89.05%), Query Frame = 0


Query: 7   HLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRESKLRLRNAMYR 66
           HL FHSID RSLLLHQNSA  H   L LT E FSMERGPRYRAYAELRESKLRLRNAMYR
Sbjct: 12  HLSFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRESKLRLRNAMYR 71

Query: 67  HDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGMLSPVMEM 126
             E PEKSTPP KKQV+F+GSETVRKRSATVAQSVPDFSAVLRKENR+PPPG LSPVMEM
Sbjct: 72  DGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRPPPG-LSPVMEM 131

Query: 127 TPPGKTWGK-NIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAAANAIN 186
           TPPGKTWGK NIGG+S  SRGSKSASAGEKRGGGL A RKSYAGFEELKGFSTAAANAIN
Sbjct: 132 TPPGKTWGKNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELKGFSTAAANAIN 191

Query: 187 GENRK--GGRRGKTVLGVRQI 205
           GEN++  GGRRGKTVLGVRQI
Sbjct: 192 GENKRGGGGRRGKTVLGVRQI 211

[Close]

BLAST of CsaV3_3G020240 vs. NCBI nr
Match: XP_022998093.1 (uncharacterized protein LOC111492844 [Cucurbita maxima])

HSP 1 Score: 318.2 bits (814), Expect = 2.1e-83
Identity = 171/200 (85.50%), Postives = 180/200 (90.00%), Query Frame = 0


Query: 7   HLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRESKLRLRNAMYR 66
           HLPFHSID RSLLLHQNSA  H   L LT E FSMERGPRYRAYAELRESKLRLRN+MYR
Sbjct: 12  HLPFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRESKLRLRNSMYR 71

Query: 67  HDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGMLSPVMEM 126
             E PEKSTPP KKQV+F+GSETVRKRSATVAQSVPDFS+VLRKEN++PPPG LSPVMEM
Sbjct: 72  DGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSSVLRKENKRPPPG-LSPVMEM 131

Query: 127 TPPGKTWGK-NIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAAANAIN 186
           TPPGKTWGK NIGG+S  SRGSKSASAGEKRGGGL A RKSYAGFEELKGFSTAAANAIN
Sbjct: 132 TPPGKTWGKNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELKGFSTAAANAIN 191

Query: 187 GENRK-GGRRGKTVLGVRQI 205
           GEN++ GGRRGKTVLGVRQI
Sbjct: 192 GENKRGGGRRGKTVLGVRQI 210

[Close]

BLAST of CsaV3_3G020240 vs. TAIR10
Match: AT1G67035.2 (unknown protein)

HSP 1 Score: 73.6 bits (179), Expect = 1.6e-13
Identity = 68/185 (36.76%), Postives = 91/185 (49.19%), Query Frame = 0


Query: 17  SLLLHQNSAADHPISLHLTPE--PFSMERGPRYRAYAELRESKLRLRNAMYRHDEHPEKS 76
           SLL   N  +D    L L  +   +  ERG RY  YA LRESKLR++          EK 
Sbjct: 12  SLLFPVNPMSDTQQKLKLLVDNGDYGFERGSRYGEYARLRESKLRMKRDF-------EKI 71

Query: 77  TPPPKKQVKFLGSETV----------------RKRSA----TVAQSVPDFSAVLRKENRK 136
               + +  F   E +                RK S+    ++AQSVPDFS+++RKENR+
Sbjct: 72  LKEEQVRFGFTREEEIRVXXXXXXXXXXNPNQRKTSSXXXXSLAQSVPDFSSMIRKENRR 131

Query: 137 PP--PGMLSPVMEMTPPGKTWGKNIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEE 178
           PP    +L    E+TPP            +  RGS SASAGEK+G G+  +RKSYA  ++
Sbjct: 132 PPVNSNLLPRRTELTPPSMKSRNAAVFAGSVIRGSVSASAGEKKGIGM--MRKSYAAVDD 187

[Close]

BLAST of CsaV3_3G020240 vs. TAIR10
Match: AT5G38300.1 (unknown protein)

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-09
Identity = 54/154 (35.06%), Postives = 70/154 (45.45%), Query Frame = 0


Query: 10  FHSIDSRSLLLHQNSAADHPISLHLTPEPFS-MERGPRYRAYAELRESKLRLRNAMYRH- 69
           F S+D  SL+L QNS   H + L L  + FS  ERGPRY  Y+ LRESKLR++    +  
Sbjct: 14  FFSVDPMSLILSQNSDT-HQLKLLL--DGFSGFERGPRYDEYSRLRESKLRMKRDFQKFL 73

Query: 70  DEHPEKSTPPPKKQVKFLG----------------------------------------- 116
           +E  E   P  KKQV+F G                                         
Sbjct: 74  EEEDEVEEPRIKKQVRFEGNSVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 133

[Close]

BLAST of CsaV3_3G020240 vs. TrEMBL
Match: tr|A0A0A0L9P8|A0A0A0L9P8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G258110 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 3.6e-108
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MAHKFPHLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRESKLRL 60
           MAHKFPHLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRESKLRL
Sbjct: 1   MAHKFPHLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRESKLRL 60

Query: 61  RNAMYRHDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGML 120
           RNAMYRHDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGML
Sbjct: 61  RNAMYRHDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGML 120

Query: 121 SPVMEMTPPGKTWGKNIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAA 180
           SPVMEMTPPGKTWGKNIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAA
Sbjct: 121 SPVMEMTPPGKTWGKNIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAA 180

Query: 181 ANAINGENRKGGRRGKTVLGVRQI 205
           ANAINGENRKGGRRGKTVLGVRQI
Sbjct: 181 ANAINGENRKGGRRGKTVLGVRQI 204

[Close]

BLAST of CsaV3_3G020240 vs. TrEMBL
Match: tr|A0A1S3CEQ6|A0A1S3CEQ6_CUCME (uncharacterized protein LOC103500118 OS=Cucumis melo OX=3656 GN=LOC103500118 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 4.0e-91
Identity = 176/188 (93.62%), Postives = 180/188 (95.74%), Query Frame = 0


Query: 1   MAHKFPHLPFHSIDSRSLLLHQNSAA-DHPISLHLTPEPFSMERGPRYRAYAELRESKLR 60
           MA KF HLPFHSIDSRSLLLHQNSAA DHPISLHLTPEPFSMERGPRY+AYAELRESKLR
Sbjct: 1   MADKFHHLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLR 60

Query: 61  LRNAMYRHDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGM 120
            RNAMYRHDEHPEKSTPPPKKQ+KFLGSETVRKR+ATVAQSVPDFSAVLRKENRKPPPGM
Sbjct: 61  FRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRTATVAQSVPDFSAVLRKENRKPPPGM 120

Query: 121 LSPVMEMTPPGKTWGKNIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTA 180
           LSPVMEMTPPGKTWGKN+GGLST SRGSKSASAGEKRGGGLT VRKSYAGFEELKGFSTA
Sbjct: 121 LSPVMEMTPPGKTWGKNMGGLSTNSRGSKSASAGEKRGGGLTTVRKSYAGFEELKGFSTA 180

Query: 181 AANAINGE 188
            A AINGE
Sbjct: 181 TAKAINGE 188

[Close]

BLAST of CsaV3_3G020240 vs. TrEMBL
Match: tr|A0A2P5AXJ1|A0A2P5AXJ1_9ROSA (Homeobox Hox-B3-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_338440 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 4.2e-48
Identity = 125/200 (62.50%), Postives = 144/200 (72.00%), Query Frame = 0


Query: 10  FHSIDSRSLLLHQNSA-ADHPISLHLTPEPFSMERGPRYRAYAELRESKLRLR-NAMYRH 69
           FHS+D  SL+L QNS+ ++ P+ L LT E F MERGPRY AYAELRESKLR+R NAM++ 
Sbjct: 24  FHSLDPISLILSQNSSDSEQPVPLKLTTESFIMERGPRYSAYAELRESKLRMRNNAMHQE 83

Query: 70  DEHPEKSTPPPKKQVKF-LGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGM--LSPVM 129
            E PE    P KKQVKF  G    RK S+ +AQSVPDFSAVLRKENRKPPP    L PVM
Sbjct: 84  FEDPEPKLTPQKKQVKFQTGLTGGRKGSSVLAQSVPDFSAVLRKENRKPPPAAANLPPVM 143

Query: 130 EMTPPGKTWGKNIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAAANAI 189
           EMTPPGK W K    + T SRGSKSA+ G+KR   +   RKSYA  E+LKG S+AAANAI
Sbjct: 144 EMTPPGKNWSKVSSKVLTNSRGSKSANGGDKR---VLMARKSYASLEDLKGLSSAAANAI 203

Query: 190 NGENR--KGGRRGKTVLGVR 203
           NGENR  +GG R +TVLG R
Sbjct: 204 NGENRGTRGGGR-QTVLGYR 219

[Close]

BLAST of CsaV3_3G020240 vs. TrEMBL
Match: tr|A0A2P4HPP5|A0A2P4HPP5_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_40791 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.6e-47
Identity = 124/200 (62.00%), Postives = 141/200 (70.50%), Query Frame = 0


Query: 10  FHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRESKLRLRNAMYRHDE 69
           FH++D  SLLL QNS ++ P+ L LT E F MERGPRY AYAELRESKLR+R    +  E
Sbjct: 22  FHALDPISLLLSQNSNSNQPVPLRLTTESFIMERGPRYGAYAELRESKLRMRQIKEQEPE 81

Query: 70  HPEKSTPPPKKQVKFLGSETVR-KRSATVAQSVPDFSAVLRKENRKPPPGMLSPVMEMTP 129
             E    PPKKQVKF  +   R K S+ +AQSVPDFSA LRKENRK P  ML P++EMTP
Sbjct: 82  VYEPKLTPPKKQVKFQANLVSRPKGSSVLAQSVPDFSATLRKENRK-PVSMLPPMLEMTP 141

Query: 130 PGKTWGKNIGGLSTTSRGSKSASAGEKRG-GGLTAVRKSYAGFEELKGFSTAAANAINGE 189
           P K  G  + G+ + SRGSKSA+AGEKRG GG    RKSYA  EELKG S+AAANAINGE
Sbjct: 142 PAKN-GSRVNGILSNSRGSKSANAGEKRGAGGGLMARKSYASVEELKGLSSAAANAINGE 201

Query: 190 NRKGGRR----GKTVLGVRQ 204
           NR GGR     GKTVLG RQ
Sbjct: 202 NR-GGRNGRMVGKTVLGYRQ 218

[Close]

BLAST of CsaV3_3G020240 vs. TrEMBL
Match: tr|A0A2P5B1U9|A0A2P5B1U9_PARAD (Homeobox Hox-B3-like protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_279140 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.0e-45
Identity = 121/200 (60.50%), Postives = 141/200 (70.50%), Query Frame = 0


Query: 10  FHSIDSRSLLLHQNSA-ADHPISLHLTPEPFSMERGPRYRAYAELRESKLRLR-NAMYRH 69
           FHS+D  SL+L QNS+ ++ P+ L LT E F MERGPRY AYAELRESKLR+R NAM++ 
Sbjct: 24  FHSLDPISLILSQNSSNSEQPVPLKLTTESFIMERGPRYSAYAELRESKLRMRNNAMHQE 83

Query: 70  DEHPEKSTPPPKKQVKF-LGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGM--LSPVM 129
            E PE    P KKQVK   G    RK S+ +AQSVPDFSAVLRKENRKPP     L P+M
Sbjct: 84  FEDPEPKLTPQKKQVKLQTGLTGGRKGSSVLAQSVPDFSAVLRKENRKPPAAAANLPPMM 143

Query: 130 EMTPPGKTWGKNIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAAANAI 189
           EMTPPGK W K    + T SRGSKSA+ G+KR   +   RKSYA  E+LKG S+AAANAI
Sbjct: 144 EMTPPGKNWSKVSSKVLTNSRGSKSANGGDKR---VLMARKSYASLEDLKGLSSAAANAI 203

Query: 190 NGENR--KGGRRGKTVLGVR 203
           NGE R  +GG R +TVLG R
Sbjct: 204 NGEKRGTRGGGR-QTVLGYR 219

The following BLAST results are available for this feature:

BLAST of CsaV3_3G020240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651352.1	5.5e-108	100.00	PREDICTED: uncharacterized protein LOC101205045 [Cucumis sativus] >KGN57709.1 hy...	[more]
XP_008461547.1	6.1e-91	93.62	PREDICTED: uncharacterized protein LOC103500118 [Cucumis melo]	[more]
XP_023524771.1	3.2e-84	86.14	uncharacterized protein LOC111788608 [Cucurbita pepo subsp. pepo]	[more]
XP_022948564.1	2.1e-83	86.07	uncharacterized protein LOC111452204 [Cucurbita moschata]	[more]
XP_022998093.1	2.1e-83	85.50	uncharacterized protein LOC111492844 [Cucurbita maxima]	[more]

BLAST of CsaV3_3G020240 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G67035.2	1.6e-13	36.76	unknown protein	[more]
AT5G38300.1	1.1e-09	35.06	unknown protein	[more]

BLAST of CsaV3_3G020240 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G020240 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L9P8\|A0A0A0L9P8_CUCSA	3.6e-108	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G258110 PE=4 SV=1	[more]
tr\|A0A1S3CEQ6\|A0A1S3CEQ6_CUCME	4.0e-91	93.62	uncharacterized protein LOC103500118 OS=Cucumis melo OX=3656 GN=LOC103500118 PE=...	[more]
tr\|A0A2P5AXJ1\|A0A2P5AXJ1_9ROSA	4.2e-48	62.50	Homeobox Hox-B3-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_338440 P...	[more]
tr\|A0A2P4HPP5\|A0A2P4HPP5_QUESU	3.6e-47	62.00	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_40791 PE=4 SV=1	[more]
tr\|A0A2P5B1U9\|A0A2P5B1U9_PARAD	2.0e-45	60.50	Homeobox Hox-B3-like protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_2791...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G020240.1	CsaV3_3G020240.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..159
None	No IPR available	PANTHER	PTHR37708	FAMILY NOT NAMED	coord: 10..204

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_3G020240	CSPI03G20280	Wild cucumber (PI 183967)	cpicucB144
CsaV3_3G020240	Cucsa.031760	Cucumber (Gy14) v1	cgycucB006
CsaV3_3G020240	CmoCh14G008090	Cucurbita moschata (Rifu)	cmocucB0272
CsaV3_3G020240	CmoCh01G004290	Cucurbita moschata (Rifu)	cmocucB0532
CsaV3_3G020240	Cp4.1LG03g06380	Cucurbita pepo (Zucchini)	cpecucB0749
CsaV3_3G020240	Cp4.1LG02g13750	Cucurbita pepo (Zucchini)	cpecucB0686
CsaV3_3G020240	Carg22289	Silver-seed gourd	carcucB0518
CsaV3_3G020240	Carg07498	Silver-seed gourd	carcucB0801
CsaV3_3G020240	Cla007138	Watermelon (97103) v1	cucwmB244
CsaV3_3G020240	ClCG05G012330	Watermelon (Charleston Gray)	cucwcgB229
CsaV3_3G020240	Lsi05G004120	Bottle gourd (USVL1VR-Ls)	cuclsiB231
CsaV3_3G020240	Bhi01G001429	Wax gourd	cucwgoB274

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_3G020240	Cucumber (Gy14) v2	cgybcucB117
CsaV3_3G020240	Cucurbita maxima (Rimu)	cmacucB0281
CsaV3_3G020240	Melon (DHL92) v3.5.1	cucmeB249
CsaV3_3G020240	Melon (DHL92) v3.6.1	cucmedB235
CsaV3_3G020240	Melon (DHL92) v3.6.1	cucmedB237
CsaV3_3G020240	Watermelon (Charleston Gray)	cucwcgB241
CsaV3_3G020240	Watermelon (97103) v1	cucwmB256
CsaV3_3G020240	Watermelon (97103) v2	cucwmbB211
CsaV3_3G020240	Watermelon (97103) v2	cucwmbB220