Carg22289 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGATAAATTCCACCAGAACTCCACCGCCGATTACCCAATTTCTCTCCTTCTCACGGCGGAGATTTTTTCCATGGAAAGAGGCCCGAGGTACAGAGCCTACGCAGAGCTCAGAGAATCCAAGCTCCGGCTGAGAAACTCACTGTACTGCGACGACGAACAGCCAGAAAAGCCTACGCCGCCGGCGAAGAAGCAAGTTAAATTTATGGGTTTGGAGACCGTAAAGAAAAGGTCAGCGGCGGTGGCGCAATCGGTGCCGGATTTCTCTGTAGTACTGAGGAAGGAGAACAGAAAGCCACCGCCGGGACTGTCGCCGGTGATGGAGATGACACCACCAGGGAAGACGCCGGGGAAGAACATTGCCGGATTGTCGGCGAATTCGAAAGGGAGTAAGTCGGCGAGTGCAGGGGGAAAAAGGGTCGGCAGATTGACCGACGTGAGGAAGAGCTACGCCGGATTTGAGGAGGTGAAGGAGCTTACAACGGCGGCGGCGAACTCCATTAATGGCGAAAACAGAGGAAGGAGAGGGAAAACTGTATTGGGAGTTAAACAGATTTGA ATGGCGGATAAATTCCACCAGAACTCCACCGCCGATTACCCAATTTCTCTCCTTCTCACGGCGGAGATTTTTTCCATGGAAAGAGGCCCGAGGTACAGAGCCTACGCAGAGCTCAGAGAATCCAAGCTCCGGCTGAGAAACTCACTGTACTGCGACGACGAACAGCCAGAAAAGCCTACGCCGCCGGCGAAGAAGCAAGTTAAATTTATGGGTTTGGAGACCGTAAAGAAAAGGTCAGCGGCGGTGGCGCAATCGGTGCCGGATTTCTCTGTAGTACTGAGGAAGGAGAACAGAAAGCCACCGCCGGGACTGTCGCCGGTGATGGAGATGACACCACCAGGGAAGACGCCGGGGAAGAACATTGCCGGATTGTCGGCGAATTCGAAAGGGAGTAAGTCGGCGAGTGCAGGGGGAAAAAGGGTCGGCAGATTGACCGACGTGAGGAAGAGCTACGCCGGATTTGAGGAGGTGAAGGAGCTTACAACGGCGGCGGCGAACTCCATTAATGGCGAAAACAGAGGAAGGAGAGGGAAAACTGTATTGGGAGTTAAACAGATTTGA ATGGCGGATAAATTCCACCAGAACTCCACCGCCGATTACCCAATTTCTCTCCTTCTCACGGCGGAGATTTTTTCCATGGAAAGAGGCCCGAGGTACAGAGCCTACGCAGAGCTCAGAGAATCCAAGCTCCGGCTGAGAAACTCACTGTACTGCGACGACGAACAGCCAGAAAAGCCTACGCCGCCGGCGAAGAAGCAAGTTAAATTTATGGGTTTGGAGACCGTAAAGAAAAGGTCAGCGGCGGTGGCGCAATCGGTGCCGGATTTCTCTGTAGTACTGAGGAAGGAGAACAGAAAGCCACCGCCGGGACTGTCGCCGGTGATGGAGATGACACCACCAGGGAAGACGCCGGGGAAGAACATTGCCGGATTGTCGGCGAATTCGAAAGGGAGTAAGTCGGCGAGTGCAGGGGGAAAAAGGGTCGGCAGATTGACCGACGTGAGGAAGAGCTACGCCGGATTTGAGGAGGTGAAGGAGCTTACAACGGCGGCGGCGAACTCCATTAATGGCGAAAACAGAGGAAGGAGAGGGAAAACTGTATTGGGAGTTAAACAGATTTGA MADKFHQNSTADYPISLLLTAEIFSMERGPRYRAYAELRESKLRLRNSLYCDDEQPEKPTPPAKKQVKFMGLETVKKRSAAVAQSVPDFSVVLRKENRKPPPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGGKRVGRLTDVRKSYAGFEEVKELTTAAANSINGENRGRRGKTVLGVKQI
BLAST of Carg22289 vs. NCBI nr
Match: XP_022934584.1 (uncharacterized protein LOC111441720 [Cucurbita moschata]) HSP 1 Score: 335.5 bits (859), Expect = 1.2e-88 Identity = 176/184 (95.65%), Postives = 178/184 (96.74%), Query Frame = 0
BLAST of Carg22289 vs. NCBI nr
Match: XP_022983943.1 (uncharacterized protein LOC111482410 [Cucurbita maxima]) HSP 1 Score: 325.5 bits (833), Expect = 1.2e-85 Identity = 173/186 (93.01%), Postives = 175/186 (94.09%), Query Frame = 0
BLAST of Carg22289 vs. NCBI nr
Match: XP_011651352.1 (PREDICTED: uncharacterized protein LOC101205045 [Cucumis sativus] >KGN57709.1 hypothetical protein Csa_3G258110 [Cucumis sativus]) HSP 1 Score: 271.9 bits (694), Expect = 1.6e-69 Identity = 149/184 (80.98%), Postives = 159/184 (86.41%), Query Frame = 0
BLAST of Carg22289 vs. NCBI nr
Match: XP_022948564.1 (uncharacterized protein LOC111452204 [Cucurbita moschata]) HSP 1 Score: 262.3 bits (669), Expect = 1.2e-66 Identity = 143/186 (76.88%), Postives = 157/186 (84.41%), Query Frame = 0
BLAST of Carg22289 vs. NCBI nr
Match: XP_022998093.1 (uncharacterized protein LOC111492844 [Cucurbita maxima]) HSP 1 Score: 261.9 bits (668), Expect = 1.6e-66 Identity = 143/185 (77.30%), Postives = 157/185 (84.86%), Query Frame = 0
BLAST of Carg22289 vs. TAIR10
Match: AT1G67035.2 (unknown protein) HSP 1 Score: 60.8 bits (146), Expect = 1.0e-09 Identity = 58/177 (32.77%), Postives = 85/177 (48.02%), Query Frame = 0
BLAST of Carg22289 vs. TAIR10
Match: AT5G38300.1 (unknown protein) HSP 1 Score: 51.2 bits (121), Expect = 7.9e-07 Identity = 46/141 (32.62%), Postives = 60/141 (42.55%), Query Frame = 0
BLAST of Carg22289 vs. TrEMBL
Match: tr|A0A0A0L9P8|A0A0A0L9P8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G258110 PE=4 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 1.0e-69 Identity = 149/184 (80.98%), Postives = 159/184 (86.41%), Query Frame = 0
BLAST of Carg22289 vs. TrEMBL
Match: tr|A0A1S3CEQ6|A0A1S3CEQ6_CUCME (uncharacterized protein LOC103500118 OS=Cucumis melo OX=3656 GN=LOC103500118 PE=4 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 1.3e-59 Identity = 129/168 (76.79%), Postives = 142/168 (84.52%), Query Frame = 0
BLAST of Carg22289 vs. TrEMBL
Match: tr|A0A2P5AXJ1|A0A2P5AXJ1_9ROSA (Homeobox Hox-B3-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_338440 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 1.7e-40 Identity = 108/185 (58.38%), Postives = 131/185 (70.81%), Query Frame = 0
BLAST of Carg22289 vs. TrEMBL
Match: tr|A0A2P4HPP5|A0A2P4HPP5_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_40791 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 1.6e-38 Identity = 106/186 (56.99%), Postives = 126/186 (67.74%), Query Frame = 0
BLAST of Carg22289 vs. TrEMBL
Match: tr|A0A2P5B1U9|A0A2P5B1U9_PARAD (Homeobox Hox-B3-like protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_279140 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 6.1e-38 Identity = 104/185 (56.22%), Postives = 128/185 (69.19%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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