CsaV3_3G019920 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G019920
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr3 : 15673316 .. 15673618 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTACCCGAGCAAAATCAGGTATGTTCAAGTCGAAAGCGTGGTTCACATGTATTAAAGACGCTCTACCTACTCCACAATGGAAACAAGCAATGGATGAGGAATATGCTGCCTTACTCAAAGTTAAGACATGGCACTTGGTACCCTCTTCTCCGTATCAAAATATTGTCGGTAACAAGTGGGTATTTCGACTCAAACGAAATTCTGATTGTTCCATTCAACGCTACAAGGCTCAATTGGTTGCCAAAGGTTTTTTTATCAACACCATGACATTGATTTCTTTGAAACATTTAGCCCCGTAG

mRNA sequence

ATGATTACCCGAGCAAAATCAGGTATGTTCAAGTCGAAAGCGTGGTTCACATGTATTAAAGACGCTCTACCTACTCCACAATGGAAACAAGCAATGGATGAGGAATATGCTGCCTTACTCAAAGTTAAGACATGGCACTTGGTACCCTCTTCTCCGTATCAAAATATTGTCGGTAACAAGTGGGTATTTCGACTCAAACGAAATTCTGATTGTTCCATTCAACGCTACAAGGCTCAATTGGTTGCCAAAGGTTTTTTTATCAACACCATGACATTGATTTCTTTGAAACATTTAGCCCCGTAG

Coding sequence (CDS)

ATGATTACCCGAGCAAAATCAGGTATGTTCAAGTCGAAAGCGTGGTTCACATGTATTAAAGACGCTCTACCTACTCCACAATGGAAACAAGCAATGGATGAGGAATATGCTGCCTTACTCAAAGTTAAGACATGGCACTTGGTACCCTCTTCTCCGTATCAAAATATTGTCGGTAACAAGTGGGTATTTCGACTCAAACGAAATTCTGATTGTTCCATTCAACGCTACAAGGCTCAATTGGTTGCCAAAGGTTTTTTTATCAACACCATGACATTGATTTCTTTGAAACATTTAGCCCCGTAG

Protein sequence

MITRAKSGMFKSKAWFTCIKDALPTPQWKQAMDEEYAALLKVKTWHLVPSSPYQNIVGNKWVFRLKRNSDCSIQRYKAQLVAKGFFINTMTLISLKHLAP

Homology

[Close]

BLAST of CsaV3_3G019920 vs. NCBI nr
Match: XP_016899477.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00820-like [Cucumis melo])

HSP 1 Score: 117.9 bits (294), Expect = 2.1e-23
Identity = 59/97 (60.82%), Postives = 68/97 (70.10%), Query Frame = 0


Query: 1   MITRAKSGMFKSKAWFTC------------IKDALPTPQWKQAMDEEYAALLKVKTWHLV 60
           MIT+AKS +FK K   +             IK AL TPQWKQAMDEEY+ALLK +TWHLV
Sbjct: 17  MITQAKSNIFKPKTLISTTAMDWSLTEPIRIKQALATPQWKQAMDEEYSALLKAQTWHLV 76

Query: 61  PSSPYQNIVGNKWVFRLKRNSDCSIQRYKAQLVAKGF 86
           P SP Q + G KWVFRLKRN+D SI+ YK +LVAKGF
Sbjct: 77  PPSPSQKVAGKKWVFRLKRNTDGSIRWYKTRLVAKGF 113

[Close]

BLAST of CsaV3_3G019920 vs. NCBI nr
Match: XP_016902198.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like isoform X2 [Cucumis melo] >XP_016902199.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like isoform X2 [Cucumis melo] >XP_016902200.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like isoform X2 [Cucumis melo] >XP_016902201.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like isoform X2 [Cucumis melo] >XP_016902202.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like isoform X2 [Cucumis melo])

HSP 1 Score: 112.1 bits (279), Expect = 1.1e-21
Identity = 50/67 (74.63%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 19 IKDALPTPQWKQAMDEEYAALLKVKTWHLVPSSPYQNIVGNKWVFRLKRNSDCSIQRYKA 78
          +KDAL TPQWK+AMDEEY+ALLK  TW LVP SP QN+VG+KWVFRLKR++D SI RYKA
Sbjct: 7  VKDALATPQWKKAMDEEYSALLKANTWSLVPPSPSQNVVGSKWVFRLKRHTDGSILRYKA 66

Query: 79 QLVAKGF 86
          ++VAKGF
Sbjct: 67 RMVAKGF 73

[Close]

BLAST of CsaV3_3G019920 vs. NCBI nr
Match: PNX72737.1 (retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Trifolium pratense])

HSP 1 Score: 109.4 bits (272), Expect = 7.3e-21
Identity = 53/98 (54.08%), Postives = 65/98 (66.33%), Query Frame = 0


Query: 1   MITRAKSGMFKSKAWF-------------TCIKDALPTPQWKQAMDEEYAALLKVKTWHL 60
           MITR K+G+FK K  F             TC+ +AL   +WKQAM +E+ AL+   TW L
Sbjct: 583 MITRGKAGIFKPKKLFSITKYPLPPSAEPTCVTEALKHSEWKQAMSDEFTALMNNGTWSL 642

Query: 61  VPSSPYQNIVGNKWVFRLKRNSDCSIQRYKAQLVAKGF 86
           VP  P+ N++GNKWVFRLKRN D SI RYKA+LVAKGF
Sbjct: 643 VPPQPHFNVIGNKWVFRLKRNPDGSISRYKARLVAKGF 680

[Close]

BLAST of CsaV3_3G019920 vs. NCBI nr
Match: GAU49939.1 (hypothetical protein TSUD_290960 [Trifolium subterraneum])

HSP 1 Score: 106.3 bits (264), Expect = 6.2e-20
Identity = 52/98 (53.06%), Postives = 63/98 (64.29%), Query Frame = 0


Query: 1   MITRAKSGMFKSKAWF-------------TCIKDALPTPQWKQAMDEEYAALLKVKTWHL 60
           M TR K+G+FK K  F             TC+  AL   +WKQAM +E+ AL+   TW L
Sbjct: 628 MTTRGKAGIFKPKKLFSVTKYPLPPSAEPTCVTQALKHGEWKQAMSDEFTALMNNGTWSL 687

Query: 61  VPSSPYQNIVGNKWVFRLKRNSDCSIQRYKAQLVAKGF 86
           VP  P+ N++GNKWVFRLKRN D SI RYKA+LVAKGF
Sbjct: 688 VPPQPHFNVIGNKWVFRLKRNPDGSISRYKARLVAKGF 725

[Close]

BLAST of CsaV3_3G019920 vs. NCBI nr
Match: PNY00673.1 (retrovirus-related Pol polyprotein from transposon TNT 1-94 [Trifolium pratense])

HSP 1 Score: 106.3 bits (264), Expect = 6.2e-20
Identity = 51/98 (52.04%), Postives = 64/98 (65.31%), Query Frame = 0


Query: 1   MITRAKSGMFKSKAWF-------------TCIKDALPTPQWKQAMDEEYAALLKVKTWHL 60
           M TR+K+G+FK K  F             TC+  AL   +WKQAM +E+ AL+   TW L
Sbjct: 387 MATRSKNGIFKPKKLFLATKYPLPPSTEPTCVSQALQHAEWKQAMSDEFTALMNNGTWSL 446

Query: 61  VPSSPYQNIVGNKWVFRLKRNSDCSIQRYKAQLVAKGF 86
           VP  P+ N++GNKWVFR+KRN D SI RYKA+LVAKGF
Sbjct: 447 VPHHPHLNVIGNKWVFRIKRNPDGSIARYKARLVAKGF 484

[Close]

BLAST of CsaV3_3G019920 vs. TAIR10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase))

HSP 1 Score: 77.4 bits (189), Expect = 5.6e-15
Identity = 47/97 (48.45%), Postives = 58/97 (59.79%), Query Frame = 0


Query: 1  MITRAKSGMFK-----SKAWFTCIKD-------ALPTPQWKQAMDEEYAALLKVKTWHLV 60
          M+TR+K+G+ K     S    T IK        AL  P W QAM EE  AL + KTW LV
Sbjct: 1  MLTRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILV 60

Query: 61 PSSPYQNIVGNKWVFRLKRNSDCSIQRYKAQLVAKGF 86
          P    QNI+G KWVF+ K +SD ++ R KA+LVAKGF
Sbjct: 61 PPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGF 97

[Close]

BLAST of CsaV3_3G019920 vs. TAIR10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 63.5 bits (153), Expect = 8.3e-11
Identity = 27/58 (46.55%), Postives = 39/58 (67.24%), Query Frame = 0


Query: 28  WKQAMDEEYAALLKVKTWHLVPSSPYQNIVGNKWVFRLKRNSDCSIQRYKAQLVAKGF 86
           W  AMD+E  A+    TW +    P +  +G KWV+++K NSD +I+RYKA+LVAKG+
Sbjct: 98  WCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGY 155

[Close]

BLAST of CsaV3_3G019920 vs. Swiss-Prot
Match: sp|P92520|M820_ARATH (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.0e-13
Identity = 47/97 (48.45%), Postives = 58/97 (59.79%), Query Frame = 0


Query: 1  MITRAKSGMFK-----SKAWFTCIKD-------ALPTPQWKQAMDEEYAALLKVKTWHLV 60
          M+TR+K+G+ K     S    T IK        AL  P W QAM EE  AL + KTW LV
Sbjct: 1  MLTRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILV 60

Query: 61 PSSPYQNIVGNKWVFRLKRNSDCSIQRYKAQLVAKGF 86
          P    QNI+G KWVF+ K +SD ++ R KA+LVAKGF
Sbjct: 61 PPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGF 97

[Close]

BLAST of CsaV3_3G019920 vs. Swiss-Prot
Match: sp|Q94HW2|POLR1_ARATH (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.8e-10
Identity = 39/98 (39.80%), Postives = 52/98 (53.06%), Query Frame = 0


Query: 1    MITRAKSGMFKSKAWFTCIK------------DALPTPQWKQAMDEEYAALLKVKTWHLV 60
            M TRAK+G+ K    ++                AL   +W+ AM  E  A +   TW LV
Sbjct: 929  MGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLV 988

Query: 61   PSSP-YQNIVGNKWVFRLKRNSDCSIQRYKAQLVAKGF 86
            P  P +  IVG +W+F  K NSD S+ RYKA+LVAKG+
Sbjct: 989  PPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGY 1026

[Close]

BLAST of CsaV3_3G019920 vs. Swiss-Prot
Match: sp|Q9ZT94|POLR2_ARATH (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.0e-10
Identity = 39/98 (39.80%), Postives = 51/98 (52.04%), Query Frame = 0


Query: 1    MITRAKSGMFKSKAWFTCIK------------DALPTPQWKQAMDEEYAALLKVKTWHLV 60
            M TRAK G+ K    ++                A+   +W+QAM  E  A +   TW LV
Sbjct: 912  MATRAKDGIRKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLV 971

Query: 61   PSSPYQ-NIVGNKWVFRLKRNSDCSIQRYKAQLVAKGF 86
            P  P    IVG +W+F  K NSD S+ RYKA+LVAKG+
Sbjct: 972  PPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGY 1009

[Close]

BLAST of CsaV3_3G019920 vs. Swiss-Prot
Match: sp|P10978|POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.8e-07
Identity = 30/70 (42.86%), Postives = 42/70 (60.00%), Query Frame = 0


Query: 19  IKDALPTPQWKQ---AMDEEYAALLKVKTWHLVPSSPYQNIVGNKWVFRLKRNSDCSIQR 78
           +K+ L  P+  Q   AM EE  +L K  T+ LV     +  +  KWVF+LK++ DC + R
Sbjct: 814 LKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVR 873

Query: 79  YKAQLVAKGF 86
           YKA+LV KGF
Sbjct: 874 YKARLVVKGF 883

[Close]

BLAST of CsaV3_3G019920 vs. TrEMBL
Match: tr|A0A1S4DU00|A0A1S4DU00_CUCME (uncharacterized mitochondrial protein AtMg00820-like OS=Cucumis melo OX=3656 GN=LOC107990535 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.4e-23
Identity = 59/97 (60.82%), Postives = 68/97 (70.10%), Query Frame = 0


Query: 1   MITRAKSGMFKSKAWFTC------------IKDALPTPQWKQAMDEEYAALLKVKTWHLV 60
           MIT+AKS +FK K   +             IK AL TPQWKQAMDEEY+ALLK +TWHLV
Sbjct: 17  MITQAKSNIFKPKTLISTTAMDWSLTEPIRIKQALATPQWKQAMDEEYSALLKAQTWHLV 76

Query: 61  PSSPYQNIVGNKWVFRLKRNSDCSIQRYKAQLVAKGF 86
           P SP Q + G KWVFRLKRN+D SI+ YK +LVAKGF
Sbjct: 77  PPSPSQKVAGKKWVFRLKRNTDGSIRWYKTRLVAKGF 113

[Close]

BLAST of CsaV3_3G019920 vs. TrEMBL
Match: tr|A0A1S4E1U4|A0A1S4E1U4_CUCME (uncharacterized mitochondrial protein AtMg00810-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 7.5e-22
Identity = 50/67 (74.63%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 19 IKDALPTPQWKQAMDEEYAALLKVKTWHLVPSSPYQNIVGNKWVFRLKRNSDCSIQRYKA 78
          +KDAL TPQWK+AMDEEY+ALLK  TW LVP SP QN+VG+KWVFRLKR++D SI RYKA
Sbjct: 7  VKDALATPQWKKAMDEEYSALLKANTWSLVPPSPSQNVVGSKWVFRLKRHTDGSILRYKA 66

Query: 79 QLVAKGF 86
          ++VAKGF
Sbjct: 67 RMVAKGF 73

[Close]

BLAST of CsaV3_3G019920 vs. TrEMBL
Match: tr|A0A2K3L2G4|A0A2K3L2G4_TRIPR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g028632 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.8e-21
Identity = 53/98 (54.08%), Postives = 65/98 (66.33%), Query Frame = 0


Query: 1   MITRAKSGMFKSKAWF-------------TCIKDALPTPQWKQAMDEEYAALLKVKTWHL 60
           MITR K+G+FK K  F             TC+ +AL   +WKQAM +E+ AL+   TW L
Sbjct: 583 MITRGKAGIFKPKKLFSITKYPLPPSAEPTCVTEALKHSEWKQAMSDEFTALMNNGTWSL 642

Query: 61  VPSSPYQNIVGNKWVFRLKRNSDCSIQRYKAQLVAKGF 86
           VP  P+ N++GNKWVFRLKRN D SI RYKA+LVAKGF
Sbjct: 643 VPPQPHFNVIGNKWVFRLKRNPDGSISRYKARLVAKGF 680

[Close]

BLAST of CsaV3_3G019920 vs. TrEMBL
Match: tr|A0A2K3NCC8|A0A2K3NCC8_TRIPR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Trifolium pratense OX=57577 GN=L195_g023958 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.1e-20
Identity = 51/98 (52.04%), Postives = 64/98 (65.31%), Query Frame = 0


Query: 1   MITRAKSGMFKSKAWF-------------TCIKDALPTPQWKQAMDEEYAALLKVKTWHL 60
           M TR+K+G+FK K  F             TC+  AL   +WKQAM +E+ AL+   TW L
Sbjct: 387 MATRSKNGIFKPKKLFLATKYPLPPSTEPTCVSQALQHAEWKQAMSDEFTALMNNGTWSL 446

Query: 61  VPSSPYQNIVGNKWVFRLKRNSDCSIQRYKAQLVAKGF 86
           VP  P+ N++GNKWVFR+KRN D SI RYKA+LVAKGF
Sbjct: 447 VPHHPHLNVIGNKWVFRIKRNPDGSIARYKARLVAKGF 484

[Close]

BLAST of CsaV3_3G019920 vs. TrEMBL
Match: tr|A0A2K3MWC6|A0A2K3MWC6_TRIPR (Copia-type polyprotein OS=Trifolium pratense OX=57577 GN=L195_g018296 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 7.0e-20
Identity = 51/98 (52.04%), Postives = 64/98 (65.31%), Query Frame = 0


Query: 1   MITRAKSGMFKSKAWF-------------TCIKDALPTPQWKQAMDEEYAALLKVKTWHL 60
           M TR K+G+FK K  F             TC+  AL   +WK+AM +E++AL+K  TW L
Sbjct: 828 MTTRGKAGIFKPKKLFSVTKYPLPPSIEPTCVTQALQHTEWKEAMSDEFSALMKNGTWSL 887

Query: 61  VPSSPYQNIVGNKWVFRLKRNSDCSIQRYKAQLVAKGF 86
           VP  P+ N++ NKWVFRLKRN D SI RYKA+LVAKGF
Sbjct: 888 VPPQPHFNVISNKWVFRLKRNPDGSISRYKARLVAKGF 925

The following BLAST results are available for this feature:

BLAST of CsaV3_3G019920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016899477.1	2.1e-23	60.82	PREDICTED: uncharacterized mitochondrial protein AtMg00820-like [Cucumis melo]	[more]
XP_016902198.1	1.1e-21	74.63	PREDICTED: uncharacterized mitochondrial protein AtMg00810-like isoform X2 [Cucu...	[more]
PNX72737.1	7.3e-21	54.08	retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Trifolium ...	[more]
GAU49939.1	6.2e-20	53.06	hypothetical protein TSUD_290960 [Trifolium subterraneum]	[more]
PNY00673.1	6.2e-20	52.04	retrovirus-related Pol polyprotein from transposon TNT 1-94 [Trifolium pratense]	[more]

BLAST of CsaV3_3G019920 vs. TAIR10


Match Name	E-value	Identity	Description
ATMG00820.1	5.6e-15	48.45	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
AT4G23160.1	8.3e-11	46.55	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]

BLAST of CsaV3_3G019920 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P92520\|M820_ARATH	1.0e-13	48.45	Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q94HW2\|POLR1_ARATH	1.8e-10	39.80	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
sp\|Q9ZT94\|POLR2_ARATH	3.0e-10	39.80	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
sp\|P10978\|POLX_TOBAC	1.8e-07	42.86	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]

BLAST of CsaV3_3G019920 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DU00\|A0A1S4DU00_CUCME	1.4e-23	60.82	uncharacterized mitochondrial protein AtMg00820-like OS=Cucumis melo OX=3656 GN=...	[more]
tr\|A0A1S4E1U4\|A0A1S4E1U4_CUCME	7.5e-22	74.63	uncharacterized mitochondrial protein AtMg00810-like isoform X2 OS=Cucumis melo ...	[more]
tr\|A0A2K3L2G4\|A0A2K3L2G4_TRIPR	4.8e-21	54.08	Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) OS=Trifol...	[more]
tr\|A0A2K3NCC8\|A0A2K3NCC8_TRIPR	4.1e-20	52.04	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Trifolium pratens...	[more]
tr\|A0A2K3MWC6\|A0A2K3MWC6_TRIPR	7.0e-20	52.04	Copia-type polyprotein OS=Trifolium pratense OX=57577 GN=L195_g018296 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005488	binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G019920.1	CsaV3_3G019920.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF204	SUBFAMILY NOT NAMED	coord: 17..85
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 17..85

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_3G019920	CSPI03G19860	Wild cucumber (PI 183967)	cpicucB144

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_3G019920	Cucumber (Chinese Long) v3	cuccucB123
CsaV3_3G019920	Silver-seed gourd	carcucB0574
CsaV3_3G019920	Silver-seed gourd	carcucB1030
CsaV3_3G019920	Cucumber (Gy14) v2	cgybcucB117
CsaV3_3G019920	Cucumber (Gy14) v2	cgybcucB213
CsaV3_3G019920	Cucumber (Gy14) v1	cgycucB006
CsaV3_3G019920	Cucumber (Gy14) v1	cgycucB326
CsaV3_3G019920	Cucurbita maxima (Rimu)	cmacucB0334
CsaV3_3G019920	Cucurbita maxima (Rimu)	cmacucB0374
CsaV3_3G019920	Cucurbita maxima (Rimu)	cmacucB0491
CsaV3_3G019920	Cucurbita maxima (Rimu)	cmacucB0723
CsaV3_3G019920	Cucurbita moschata (Rifu)	cmocucB0328
CsaV3_3G019920	Cucurbita moschata (Rifu)	cmocucB0373
CsaV3_3G019920	Cucurbita moschata (Rifu)	cmocucB0480
CsaV3_3G019920	Cucurbita moschata (Rifu)	cmocucB0710
CsaV3_3G019920	Cucurbita pepo (Zucchini)	cpecucB0036
CsaV3_3G019920	Cucurbita pepo (Zucchini)	cpecucB0204
CsaV3_3G019920	Cucurbita pepo (Zucchini)	cpecucB0248
CsaV3_3G019920	Cucurbita pepo (Zucchini)	cpecucB0899
CsaV3_3G019920	Wild cucumber (PI 183967)	cpicucB266
CsaV3_3G019920	Bottle gourd (USVL1VR-Ls)	cuclsiB165
CsaV3_3G019920	Bottle gourd (USVL1VR-Ls)	cuclsiB230
CsaV3_3G019920	Melon (DHL92) v3.5.1	cucmeB171
CsaV3_3G019920	Melon (DHL92) v3.5.1	cucmeB247
CsaV3_3G019920	Melon (DHL92) v3.6.1	cucmedB161
CsaV3_3G019920	Melon (DHL92) v3.6.1	cucmedB246
CsaV3_3G019920	Watermelon (Charleston Gray)	cucwcgB208
CsaV3_3G019920	Watermelon (Charleston Gray)	cucwcgB238
CsaV3_3G019920	Watermelon (97103) v1	cucwmB252
CsaV3_3G019920	Watermelon (97103) v1	cucwmB268
CsaV3_3G019920	Watermelon (97103) v2	cucwmbB175
CsaV3_3G019920	Watermelon (97103) v2	cucwmbB217
CsaV3_3G019920	Wax gourd	cucwgoB266
CsaV3_3G019920	Wax gourd	cucwgoB287