CsaV3_3G017990 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G017990
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Protein GAMETE EXPRESSED 1-like protein
Location	chr3 : 13685675 .. 13687533 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCAAGTACTTGCATGAACATGAGCATAGGATCTATCTTGAGTTCTATCTTGAAACTAACTCCATTTTCCATCAGCTATAGTGAGTAATGAGTATCATATCTTATTTTTTATCTAACTTTTGTTTACTTTTTCTTCCTTGTGAAATTAGCATTGTCTCAGACACGATTTTGGTATTGTTCCCAGGGCTCATGCTTTCAAGCATGAAACGGAGAGACTGGTGAATGAGTTAAAGAGATCTTCCGAATCTGCTGAAGCCAAGTTAGAAATCATTGAGGAAAGATCGGAATCTTTGTTGCAAAATTCATACCACATTTCTGATTCCTTGGAAACTACTGGTATTCAAATACAACAAGTGGCTCAAACATCAAGGAAACTAGAAGATCACATGGGCGCTGTGCTACACCACTCAGAAAAAGTTTATGAACAATCCAGGAGGATGGAGACTTCCCAATTGGAACTTCAAGAAGGCCAGTTAAAGCTGAGAAGAAGTTTGGAGGAAGGAATGGAGATGCTTCACAATTCCTACAAAAATCTTGGCCAAGAGATGGATGGTTTAAGAGACGAAGCCATTGACATTGAGAAGGAGATATCTAAAGTAGGAGATGCCATGTCTTTGAAGATGACATACTTGCAGACCACGGCTGAGGACATTGGGAATATGGCGGGGGTTTCATTGAACAAACAATAAGAACTTCTCGACGCTCAATCCATAGCACTCAATGGTCTTCATTCTTTAAGCAAAGTTCAATCTGAAGTGCTAGAAGAGAGCAGGTATATTATATTATGGATGTGGAATGAATTTAGAACCTGCTTAAATTTCTCTAATTTGCTTTGTGACCTGCAAGAGTAAGCTGCAACAATTGGCTGAATATGGCCATAGACAGCAGGAGGAGCTTCTTCAGCGACAGAAACACCTTCAACGATTTCATGATCGTTTAATGGAAAATTCTCAGTCCATCTTGGCAGCACAGGTTAGCCTTTTCTCTAAGCTAAGACTATTAGAGAGCGTATTAATTGCTTACTTTTTCATTCTGTTGACAGCAATCATTTGAATCAAGGCAAGCAAATATATTCATTGCATTAGACAAGTTCTTCACCTTGCACAATGCAATGTTGCTGAATCTCGATTAATCAAAGTCTTCTTCATTTACTTCACTTCAATCTTTATCATCTACATGTTTAGTAGCACCAAACAAACTTGTGTTATTAGGCCCTGGCTATATATTGGTAGTACAATTTTCTATTCATAAATATTCTCCTTCTTTGAAGATCAACAGATTACTGAACGATTCAATTTATAATTATTAGAGTTGTGTGTCACATTCATAATTGAAGTAGCAATACTTCGGCTGGAGGTGCTTGATACAAAACAGCAAACATGGATTGTAAACTTGGTTCGGACAGTCTTCCTGCTTCTTGCTTTTCTTCAGCCTCTTCATGCTATTTGCACATACAGGTAAACCAATATATAATTTTACAATTGAAACCTAAGTCATAAATAAATGCGCTGGTTGAGGTGGTAATTAATACAAAACATGATGGTGTAAAATTGTAGGGATTATGGTGTTTTGAACTATCACATGCTACTAATGTTAGTGGAAAAGATCAATGGGATGCAGACATCAACTAAGTTAACTTGGGACAGTGAGAGTGATATGAACTGGGCTTCATGGATTGACATCGAGTTATGAAGATATTGAAGATTCTGAATATGATCTTCTAGAGGAAATAGGGGAGAATTTGATCTCTACTACTTCAACATCAAGAAAGTTTGAGACGGATGTAGAGCCAACTCTGCTATCTTTGCCATCGATCACTTCGTCAGTAATTTTATCATTTATCAGCAATAACTGC

mRNA sequence

ATGCCTCAACATTGTCTCAGACACGATTTTGGTATTGTTCCCAGGGCTCATGCTTTCAAGCATGAAACGGAGAGACTGGTGAATGAGTTAAAGAGATCTTCCGAATCTGCTGAAGCCAAGTTAGAAATCATTGAGGAAAGATCGGAATCTTTGTTGCAAAATTCATACCACATTTCTGATTCCTTGGAAACTACTGGTATTCAAATACAACAAGTGGCTCAAACATCAAGGAAACTAGAAGATCACATGGGCGCTGTGCTACACCACTCAGAAAAAGTTTATGAACAATCCAGGAGGATGGAGACTTCCCAATTGGAACTTCAAGAAGGCCAGTTAAAGCTGAGAAGAAGTTTGGAGGAAGGAATGGAGATGCTTCACAATTCCTACAAAAATCTTGGCCAAGAGATGGATGGTTTAAGAGACGAAGCCATTGACATTGAGAAGGAGATATCTAAAGTAGGAGATGCCATGTCTTTGAAGATGACATACTTGCAGACCACGGCTGAGGACATTGGGAATATGGCGGGGGTTTCATTGAACAAACAATAA

Coding sequence (CDS)

ATGCCTCAACATTGTCTCAGACACGATTTTGGTATTGTTCCCAGGGCTCATGCTTTCAAGCATGAAACGGAGAGACTGGTGAATGAGTTAAAGAGATCTTCCGAATCTGCTGAAGCCAAGTTAGAAATCATTGAGGAAAGATCGGAATCTTTGTTGCAAAATTCATACCACATTTCTGATTCCTTGGAAACTACTGGTATTCAAATACAACAAGTGGCTCAAACATCAAGGAAACTAGAAGATCACATGGGCGCTGTGCTACACCACTCAGAAAAAGTTTATGAACAATCCAGGAGGATGGAGACTTCCCAATTGGAACTTCAAGAAGGCCAGTTAAAGCTGAGAAGAAGTTTGGAGGAAGGAATGGAGATGCTTCACAATTCCTACAAAAATCTTGGCCAAGAGATGGATGGTTTAAGAGACGAAGCCATTGACATTGAGAAGGAGATATCTAAAGTAGGAGATGCCATGTCTTTGAAGATGACATACTTGCAGACCACGGCTGAGGACATTGGGAATATGGCGGGGGTTTCATTGAACAAACAATAA

Protein sequence

MPQHCLRHDFGIVPRAHAFKHETERLVNELKRSSESAEAKLEIIEERSESLLQNSYHISDSLETTGIQIQQVAQTSRKLEDHMGAVLHHSEKVYEQSRRMETSQLELQEGQLKLRRSLEEGMEMLHNSYKNLGQEMDGLRDEAIDIEKEISKVGDAMSLKMTYLQTTAEDIGNMAGVSLNKQ

Homology

[Close]

BLAST of CsaV3_3G017990 vs. NCBI nr
Match: XP_011652779.1 (PREDICTED: protein GAMETE EXPRESSED 1-like [Cucumis sativus])

HSP 1 Score: 305.1 bits (780), Expect = 1.6e-79
Identity = 163/167 (97.60%), Postives = 164/167 (98.20%), Query Frame = 0


Query: 15  RAHAFKHETERLVNELKRSSESAEAKLEIIEERSESLLQNSYHISDSLETTGIQIQQVAQ 74
           RAHAFKHETERLVNELKRSSESAEAKLEIIEERSESLLQNSYHISDSLETTGIQIQQVAQ
Sbjct: 61  RAHAFKHETERLVNELKRSSESAEAKLEIIEERSESLLQNSYHISDSLETTGIQIQQVAQ 120

Query: 75  TSRKLEDHMGAVLHHSEKVYEQSRRMETSQLELQEGQLKLRRSLEEGMEMLHNSYKNLGQ 134
           TSRKLEDHMGAVLHHSEKVYEQSRRMETSQLELQEGQLKLRRSLEEGMEMLHNSYKNLGQ
Sbjct: 121 TSRKLEDHMGAVLHHSEKVYEQSRRMETSQLELQEGQLKLRRSLEEGMEMLHNSYKNLGQ 180

Query: 135 EMDGLRDEAIDIEKEISKVGDAMSLKMTYLQTTAEDIGNMAGVSLNK 182
           EMDGLRDEAIDIEKEISKVGDAMSLKMTYLQTTAEDIGNMAG  L +
Sbjct: 181 EMDGLRDEAIDIEKEISKVGDAMSLKMTYLQTTAEDIGNMAGSKLQQ 227

[Close]

BLAST of CsaV3_3G017990 vs. NCBI nr
Match: KGN57473.1 (hypothetical protein Csa_3G194400 [Cucumis sativus])

HSP 1 Score: 303.9 bits (777), Expect = 3.7e-79
Identity = 162/167 (97.01%), Postives = 164/167 (98.20%), Query Frame = 0


Query: 15  RAHAFKHETERLVNELKRSSESAEAKLEIIEERSESLLQNSYHISDSLETTGIQIQQVAQ 74
           +AHAFKHETERLVNELKRSSESAEAKLEIIEERSESLLQNSYHISDSLETTGIQIQQVAQ
Sbjct: 119 KAHAFKHETERLVNELKRSSESAEAKLEIIEERSESLLQNSYHISDSLETTGIQIQQVAQ 178

Query: 75  TSRKLEDHMGAVLHHSEKVYEQSRRMETSQLELQEGQLKLRRSLEEGMEMLHNSYKNLGQ 134
           TSRKLEDHMGAVLHHSEKVYEQSRRMETSQLELQEGQLKLRRSLEEGMEMLHNSYKNLGQ
Sbjct: 179 TSRKLEDHMGAVLHHSEKVYEQSRRMETSQLELQEGQLKLRRSLEEGMEMLHNSYKNLGQ 238

Query: 135 EMDGLRDEAIDIEKEISKVGDAMSLKMTYLQTTAEDIGNMAGVSLNK 182
           EMDGLRDEAIDIEKEISKVGDAMSLKMTYLQTTAEDIGNMAG  L +
Sbjct: 239 EMDGLRDEAIDIEKEISKVGDAMSLKMTYLQTTAEDIGNMAGSKLQQ 285

[Close]

BLAST of CsaV3_3G017990 vs. NCBI nr
Match: XP_022143320.1 (protein GAMETE EXPRESSED 1-like [Momordica charantia])

HSP 1 Score: 261.9 bits (668), Expect = 1.6e-66
Identity = 138/168 (82.14%), Postives = 158/168 (94.05%), Query Frame = 0


Query: 15  RAHAFKHETERLVNELKRSSESAEAKLEIIEERSESLLQNSYHISDSLETTGIQIQQVAQ 74
           +AHAFK +TERLVNELKRSSE+AE KLEIIEERSESLLQNSY I DSL +TGIQIQQ+AQ
Sbjct: 145 QAHAFKRDTERLVNELKRSSEAAEGKLEIIEERSESLLQNSYQIFDSLNSTGIQIQQMAQ 204

Query: 75  TSRKLEDHMGAVLHHSEKVYEQSRRMETSQLELQEGQLKLRRSLEEGMEMLHNSYKNLGQ 134
           TSRKLEDHMG VL+HSE+VYEQS+R+ETSQ ELQE QLKLRRSLEEGM++L +SYKNLG+
Sbjct: 205 TSRKLEDHMGVVLNHSEEVYEQSKRIETSQSELQESQLKLRRSLEEGMDLLQDSYKNLGR 264

Query: 135 EMDGLRDEAIDIEKEISKVGDAMSLKMTYLQTTAEDIGNMAGVSLNKQ 183
           EMDGLRDEAI+IEKEI+KVGDAM LKMTYLQ+TA+DIGN+AG+SL+KQ
Sbjct: 265 EMDGLRDEAIEIEKEIAKVGDAMFLKMTYLQSTADDIGNIAGLSLDKQ 312

[Close]

BLAST of CsaV3_3G017990 vs. NCBI nr
Match: XP_022143299.1 (protein GAMETE EXPRESSED 1 [Momordica charantia] >XP_022143300.1 protein GAMETE EXPRESSED 1 [Momordica charantia])

HSP 1 Score: 249.6 bits (636), Expect = 8.2e-63
Identity = 130/168 (77.38%), Postives = 151/168 (89.88%), Query Frame = 0


Query: 15  RAHAFKHETERLVNELKRSSESAEAKLEIIEERSESLLQNSYHISDSLETTGIQIQQVAQ 74
           +AHAFKH+TERLVNELKRSSE+ E KLE IEE+SESLLQNSY I DSL +TG+QIQQ+ Q
Sbjct: 155 QAHAFKHDTERLVNELKRSSEAVEGKLETIEEKSESLLQNSYQIFDSLNSTGVQIQQMVQ 214

Query: 75  TSRKLEDHMGAVLHHSEKVYEQSRRMETSQLELQEGQLKLRRSLEEGMEMLHNSYKNLGQ 134
           TSRKLEDHMG VL HSE VYEQ++++ETSQ ELQEGQL+LRRSLEEGMEML +SY NL +
Sbjct: 215 TSRKLEDHMGVVLKHSEAVYEQTKKIETSQSELQEGQLRLRRSLEEGMEMLQDSYSNLSR 274

Query: 135 EMDGLRDEAIDIEKEISKVGDAMSLKMTYLQTTAEDIGNMAGVSLNKQ 183
           EMDGLRDEA++IEKEI+KVGDAM  KM YLQ+TA+DIGNMAG+SL+KQ
Sbjct: 275 EMDGLRDEAMEIEKEITKVGDAMFSKMKYLQSTADDIGNMAGLSLDKQ 322

[Close]

BLAST of CsaV3_3G017990 vs. NCBI nr
Match: XP_022983403.1 (protein GAMETE EXPRESSED 1 [Cucurbita maxima])

HSP 1 Score: 194.5 bits (493), Expect = 3.1e-46
Identity = 107/168 (63.69%), Postives = 126/168 (75.00%), Query Frame = 0


Query: 15  RAHAFKHETERLVNELKRSSESAEAKLEIIEERSESLLQNSYHISDSLETTGIQIQQVAQ 74
           +AHAFKH+TERLVNELKRSSE+A+ KLE IEE+SESLLQNSY I DSL +TG+QIQ++ Q
Sbjct: 284 QAHAFKHDTERLVNELKRSSEAAQGKLESIEEKSESLLQNSYQIYDSLNSTGVQIQKMVQ 343

Query: 75  TSRKLEDHMGAVLHHSEKVYEQSRRMETSQLELQEGQLKLRRSLEEGMEMLHNSYKNLGQ 134
           TSRKLEDHMG V                                EEGMEML +SY NLG+
Sbjct: 344 TSRKLEDHMGTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGMEMLQDSYSNLGR 403

Query: 135 EMDGLRDEAIDIEKEISKVGDAMSLKMTYLQTTAEDIGNMAGVSLNKQ 183
           EMDGLR+EAI+IEKEI+KVGD+MSLKM YLQ+TA+DIGNMAG+SL+KQ
Sbjct: 404 EMDGLREEAIEIEKEIAKVGDSMSLKMKYLQSTADDIGNMAGLSLDKQ 451

[Close]

BLAST of CsaV3_3G017990 vs. TAIR10
Match: AT5G55490.1 (gamete expressed protein 1)

HSP 1 Score: 70.9 bits (172), Expect = 9.5e-13
Identity = 46/147 (31.29%), Postives = 79/147 (53.74%), Query Frame = 0


Query: 15  RAHAFKHETERLVNELKRSSESAEAKLEIIEERSESLLQNSYHISDSLETTGIQIQQVAQ 74
           +++AFK+E ERLVNELK +++  E KL+I+E +S++L+Q S  I DSL +  +++Q VA 
Sbjct: 160 QSNAFKNEIERLVNELKNTAQYTEDKLDILESKSDALIQTSSMIHDSLGSLDVRVQNVAS 219

Query: 75  TSRKLEDHMGAVLHHSEKVYEQSRRMETSQLELQEGQLKLRRSLEEGMEMLHNSYKNLGQ 134
            +  LE  +  +                                ++GM+M  ++Y N+ +
Sbjct: 220 VTNTLETSVSGLSQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDGMDMFLDAYTNIQE 279

Query: 135 EMDGLRDEAIDIEKEISKVGDAMSLKM 162
            +D L+ +   IE EIS +G+ +S KM
Sbjct: 280 GVDKLKSDTEQIEVEISVLGNNLSTKM 306

[Close]

BLAST of CsaV3_3G017990 vs. Swiss-Prot
Match: sp|Q681K7|GEX1_ARATH (Protein GAMETE EXPRESSED 1 OS=Arabidopsis thaliana OX=3702 GN=GEX1 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.7e-11
Identity = 46/147 (31.29%), Postives = 79/147 (53.74%), Query Frame = 0


Query: 15  RAHAFKHETERLVNELKRSSESAEAKLEIIEERSESLLQNSYHISDSLETTGIQIQQVAQ 74
           +++AFK+E ERLVNELK +++  E KL+I+E +S++L+Q S  I DSL +  +++Q VA 
Sbjct: 160 QSNAFKNEIERLVNELKNTAQYTEDKLDILESKSDALIQTSSMIHDSLGSLDVRVQNVAS 219

Query: 75  TSRKLEDHMGAVLHHSEKVYEQSRRMETSQLELQEGQLKLRRSLEEGMEMLHNSYKNLGQ 134
            +  LE  +  +                                ++GM+M  ++Y N+ +
Sbjct: 220 VTNTLETSVSGLSQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDGMDMFLDAYTNIQE 279

Query: 135 EMDGLRDEAIDIEKEISKVGDAMSLKM 162
            +D L+ +   IE EIS +G+ +S KM
Sbjct: 280 GVDKLKSDTEQIEVEISVLGNNLSTKM 306

[Close]

BLAST of CsaV3_3G017990 vs. TrEMBL
Match: tr|A0A0A0L6W7|A0A0A0L6W7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G194400 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 2.4e-79
Identity = 162/167 (97.01%), Postives = 164/167 (98.20%), Query Frame = 0


Query: 15  RAHAFKHETERLVNELKRSSESAEAKLEIIEERSESLLQNSYHISDSLETTGIQIQQVAQ 74
           +AHAFKHETERLVNELKRSSESAEAKLEIIEERSESLLQNSYHISDSLETTGIQIQQVAQ
Sbjct: 119 KAHAFKHETERLVNELKRSSESAEAKLEIIEERSESLLQNSYHISDSLETTGIQIQQVAQ 178

Query: 75  TSRKLEDHMGAVLHHSEKVYEQSRRMETSQLELQEGQLKLRRSLEEGMEMLHNSYKNLGQ 134
           TSRKLEDHMGAVLHHSEKVYEQSRRMETSQLELQEGQLKLRRSLEEGMEMLHNSYKNLGQ
Sbjct: 179 TSRKLEDHMGAVLHHSEKVYEQSRRMETSQLELQEGQLKLRRSLEEGMEMLHNSYKNLGQ 238

Query: 135 EMDGLRDEAIDIEKEISKVGDAMSLKMTYLQTTAEDIGNMAGVSLNK 182
           EMDGLRDEAIDIEKEISKVGDAMSLKMTYLQTTAEDIGNMAG  L +
Sbjct: 239 EMDGLRDEAIDIEKEISKVGDAMSLKMTYLQTTAEDIGNMAGSKLQQ 285

[Close]

BLAST of CsaV3_3G017990 vs. TrEMBL
Match: tr|A0A2N9IKC0|A0A2N9IKC0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52365 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 4.8e-43
Identity = 101/171 (59.06%), Postives = 131/171 (76.61%), Query Frame = 0


Query: 12  IVPRAHAFKHETERLVNELKRSSESAEAKLEIIEERSESLLQNSYHISDSLETTGIQIQQ 71
           +  +AHAFK +TERL+NELK S+  AE KLEIIE ++ESLLQNS  I DSL +   QI  
Sbjct: 158 VTVKAHAFKQQTERLINELKTSAVLAEDKLEIIEGKTESLLQNSNEIYDSLNSIDTQIHH 217

Query: 72  VAQTSRKLEDHMGAVLHHSEKVYEQSRRMETSQLELQEGQLKLRRSLEEGMEMLHNSYKN 131
           VA T++ + D +  VL HSE VYEQS+ +  SQ ELQEGQ+++RR+L +GM ML +SY  
Sbjct: 218 VALTTKNVGDQIDVVLMHSEAVYEQSKELAASQSELQEGQVEMRRNLVDGMVMLKDSYNI 277

Query: 132 LGQEMDGLRDEAIDIEKEISKVGDAMSLKMTYLQTTAEDIGNMAGVSLNKQ 183
           LGQE+D +R+EAI+IEK I+KVGDAMS KM  LQ+ A+DIGN+AG+SL+KQ
Sbjct: 278 LGQEIDNIRNEAIEIEKGITKVGDAMSTKMGNLQSKADDIGNIAGISLDKQ 328

[Close]

BLAST of CsaV3_3G017990 vs. TrEMBL
Match: tr|A0A2N9GWG7|A0A2N9GWG7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31740 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.1e-42
Identity = 101/168 (60.12%), Postives = 130/168 (77.38%), Query Frame = 0


Query: 15  RAHAFKHETERLVNELKRSSESAEAKLEIIEERSESLLQNSYHISDSLETTGIQIQQVAQ 74
           +AHAFK +TERL+NELK S+  AE KLEIIE ++ESLLQNS  I DSL +   QI  VA 
Sbjct: 158 QAHAFKQQTERLINELKTSAVLAEDKLEIIEGKTESLLQNSNEIYDSLNSIDTQIHHVAL 217

Query: 75  TSRKLEDHMGAVLHHSEKVYEQSRRMETSQLELQEGQLKLRRSLEEGMEMLHNSYKNLGQ 134
           T++ + D +  VL HSE VYEQS+ +  SQ ELQEGQ+++RR+L +GM ML +SY  LGQ
Sbjct: 218 TTKNVGDQIDVVLMHSEAVYEQSKELAASQSELQEGQVEMRRNLVDGMVMLKDSYNILGQ 277

Query: 135 EMDGLRDEAIDIEKEISKVGDAMSLKMTYLQTTAEDIGNMAGVSLNKQ 183
           E+D +R+EAI+IEK I+KVGDAMS KM  LQ+ A+DIGN+AG+SL+KQ
Sbjct: 278 EIDNIRNEAIEIEKGITKVGDAMSTKMGNLQSKADDIGNIAGISLDKQ 325

[Close]

BLAST of CsaV3_3G017990 vs. TrEMBL
Match: tr|A0A0A0KT36|A0A0A0KT36_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001620 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.1e-39
Identity = 99/168 (58.93%), Postives = 118/168 (70.24%), Query Frame = 0


Query: 15  RAHAFKHETERLVNELKRSSESAEAKLEIIEERSESLLQNSYHISDSLETTGIQIQQVAQ 74
           +A+AFK +TERLVNE                                        Q++AQ
Sbjct: 152 QANAFKLDTERLVNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKMAQ 211

Query: 75  TSRKLEDHMGAVLHHSEKVYEQSRRMETSQLELQEGQLKLRRSLEEGMEMLHNSYKNLGQ 134
           TSRKLEDHMG VL HSE VYEQS+++ETSQLELQEGQLKLR++LEEGMEML +SY +LGQ
Sbjct: 212 TSRKLEDHMGIVLKHSEAVYEQSKKIETSQLELQEGQLKLRKTLEEGMEMLQDSYTDLGQ 271

Query: 135 EMDGLRDEAIDIEKEISKVGDAMSLKMTYLQTTAEDIGNMAGVSLNKQ 183
           EMD LR E I+IEKEI+KVGD+MSLKM YLQ+TA+DIGNMAG+SL+KQ
Sbjct: 272 EMDNLRVETIEIEKEITKVGDSMSLKMKYLQSTADDIGNMAGLSLDKQ 319

[Close]

BLAST of CsaV3_3G017990 vs. TrEMBL
Match: tr|A0A1R3KLL9|A0A1R3KLL9_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_06958 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 6.0e-38
Identity = 93/165 (56.36%), Postives = 118/165 (71.52%), Query Frame = 0


Query: 18  AFKHETERLVNELKRSSESAEAKLEIIEERSESLLQNSYHISDSLETTGIQIQQVAQTSR 77
           AFKHETERLVNEL+ S++ AE KL+ IE+R+  LLQNS  I DSL     QI  V QT+ 
Sbjct: 126 AFKHETERLVNELRSSAQYAEDKLDSIEDRTSVLLQNSNQIHDSLNAIDTQIHNVEQTTH 185

Query: 78  KLEDHMGAVLHHSEKVYEQSRRMETSQLELQEGQLKLRRSLEEGMEMLHNSYKNLGQEMD 137
            L   MG+++ HS  VY Q++ +  SQ+ELQ+GQ  +   L+EG+EML  +YKNLG E+D
Sbjct: 186 SLHGQMGSLVEHSRIVYVQAKDIAASQVELQKGQAMMNNQLKEGIEMLDGAYKNLGHEVD 245

Query: 138 GLRDEAIDIEKEISKVGDAMSLKMTYLQTTAEDIGNMAGVSLNKQ 183
            LR+EAI IE EI+KVG AMS  M  LQ  A+DIGN+AGVSL+KQ
Sbjct: 246 NLRNEAIFIENEITKVGTAMSSSMNNLQKKADDIGNLAGVSLDKQ 290

The following BLAST results are available for this feature:

BLAST of CsaV3_3G017990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652779.1	1.6e-79	97.60	PREDICTED: protein GAMETE EXPRESSED 1-like [Cucumis sativus]	[more]
KGN57473.1	3.7e-79	97.01	hypothetical protein Csa_3G194400 [Cucumis sativus]	[more]
XP_022143320.1	1.6e-66	82.14	protein GAMETE EXPRESSED 1-like [Momordica charantia]	[more]
XP_022143299.1	8.2e-63	77.38	protein GAMETE EXPRESSED 1 [Momordica charantia] >XP_022143300.1 protein GAMETE ...	[more]
XP_022983403.1	3.1e-46	63.69	protein GAMETE EXPRESSED 1 [Cucurbita maxima]	[more]

BLAST of CsaV3_3G017990 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G55490.1	9.5e-13	31.29	gamete expressed protein 1	[more]

BLAST of CsaV3_3G017990 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q681K7\|GEX1_ARATH	1.7e-11	31.29	Protein GAMETE EXPRESSED 1 OS=Arabidopsis thaliana OX=3702 GN=GEX1 PE=1 SV=1	[more]

BLAST of CsaV3_3G017990 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L6W7\|A0A0A0L6W7_CUCSA	2.4e-79	97.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G194400 PE=4 SV=1	[more]
tr\|A0A2N9IKC0\|A0A2N9IKC0_FAGSY	4.8e-43	59.06	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52365 PE=4 SV=1	[more]
tr\|A0A2N9GWG7\|A0A2N9GWG7_FAGSY	1.1e-42	60.12	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31740 PE=4 SV=1	[more]
tr\|A0A0A0KT36\|A0A0A0KT36_CUCSA	1.1e-39	58.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001620 PE=4 SV=1	[more]
tr\|A0A1R3KLL9\|A0A1R3KLL9_9ROSI	6.0e-38	56.36	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_06958 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0048856	anatomical structure development
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0048229	gametophyte development
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G017990.1	CsaV3_3G017990.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 122..149
None	No IPR available	COILS	Coil	Coil	coord: 20..54
None	No IPR available	PANTHER	PTHR33538	FAMILY NOT NAMED	coord: 15..165

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_3G017990	CSPI03G17900	Wild cucumber (PI 183967)	cpicucB144
CsaV3_3G017990	Cucsa.108690	Cucumber (Gy14) v1	cgycucB137
CsaV3_3G017990	CmoCh14G008950	Cucurbita moschata (Rifu)	cmocucB0276
CsaV3_3G017990	CsGy3G017850	Cucumber (Gy14) v2	cgybcucB117
CsaV3_3G017990	Cla013122	Watermelon (97103) v1	cucwmB252
CsaV3_3G017990	MELO3C019571	Melon (DHL92) v3.5.1	cucmeB247
CsaV3_3G017990	ClCG05G010520	Watermelon (Charleston Gray)	cucwcgB238
CsaV3_3G017990	Lsi05G002630	Bottle gourd (USVL1VR-Ls)	cuclsiB230
CsaV3_3G017990	MELO3C019571.2	Melon (DHL92) v3.6.1	cucmedB246
CsaV3_3G017990	Cla97C05G092890	Watermelon (97103) v2	cucwmbB217

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_3G017990	Silver-seed gourd	carcucB0203
CsaV3_3G017990	Silver-seed gourd	carcucB0802
CsaV3_3G017990	Cucurbita maxima (Rimu)	cmacucB0285
CsaV3_3G017990	Cucurbita maxima (Rimu)	cmacucB0550
CsaV3_3G017990	Cucurbita moschata (Rifu)	cmocucB0535
CsaV3_3G017990	Cucurbita pepo (Zucchini)	cpecucB0689
CsaV3_3G017990	Cucurbita pepo (Zucchini)	cpecucB0753
CsaV3_3G017990	Wax gourd	cucwgoB287