CsaV3_3G017940 (gene) Cucumber (Chinese Long) v3

NameCsaV3_3G017940
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3 : 13646402 .. 13647795 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCAAACACTTCAACGTTCTTCTGCTTCTTCTTATGCTTCTGCTTCTTCTTCTTCTGCTGCTTCTGCTTCTGCTGCTTCTTCTTCTGCTTCTTCTTCTGCTCCTACTTCTGCTCCTTCTCCTTCTGCTTCTTCTCCTTCTGCTTCTCCTTCTGCTTCTCCTTCTGCCTCTGCCTTCTACTTCTGCCTCTGCCTTTTGCTTCTGCTTCTGCCTTCTGCTGCTTCTTCTGCTGCTACTTCTTCTGCTGCTTCTTCTTCTTCTTCTGCTTCCTCTTCTTCTTCTGCTTCCTCTTCTTCTTCTCCTTCCTCTTATTCTCCTTCTTCTTCTCCTCCTTCCTCTTCTGCTTCTTCTGCTTCTTCTGCTTCTTCTGCTTCTTCTGCTTCTTCTGCTTCTGCTGCTTCTGCTTCTGCTTCTGCTGCTTCTGCTTCTGCTTCTGCTTCTTCTTCTGCTCCTGCTTCTGCTCCTTCTCCTCCTGCTTCTTCTCCTTCTGCTTCTCCTTCTGCCTCTGCCTTCTACTTCTGCCTCTGCCTTTTTCTTCTGCTTCTGCCTTCTGCTGCTTCCTCTGCTTCTTCTGCTTCCTCTGCTGCTTCTGCTGCTGCTTCTGCTGCTTCTTCTGCTACTTCTTCTGCTTCTTCTTCTTCTTCTTCTGCTTCCTCTTCTTCTTCTGCTTCCTCTTCTTCTTCTCCTTCCTCTTCTTCTCCTTCTTCTTCTCCTCCTTCCTCTTCTTCTTCTGCTTCTTCTGCTTCTGCTTCTTCTCCTTCTTCTGCTTCTTCTCCTGCTTCTTTTCCTTCTTCTCCTTCTTCTTCTTCTTCTTCTCCTTCTTCTTCTGCTTCTTCTTCTTCTTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCTTCTTCTTCTTCTTCTTATGCTTCTTCTTCTGCTTCTGCTTCTTCTGCTTCTGCTTCTTCTCCTTCTCCTGCTTCTTCTCCTTCTTCTTCTCCTTCTTCTCCTTCTTCTCCTGCTTCTTCTGCTTCTTCTGCTTCTCCTCCTTCTTCTCCTCCTTCTTCTTCTCCTTCTTCTTCTCCTTCTTCTCCTTCTGCTCCTTCTTCTCCTTCTGCTTCTTCTCCTTCTGCTCCTTCTTCTTCTTCTGCTCCTTCTCCTCCTTCTTCTTCTGCTTCTTCTCCTCCTTCTTCTCCTCCTCCTTCTTCTGCTCCTTCTTCTTCTTCTGCTCCTTCTTCTTCTGCTTCTTTTTCTGCTCCTTCTTCTTCTTCTGCTTCTTCTTCTGCTCCTTCTTCTTCTCCTTCTCCTTCTTCTTCTCCTTCTTCTTCTTCTCCTTCTTCTTCTTCTCCTTCTTCTTCTCCTTCTTCTTCTCCTTCTTCTTCTAATCACCACATTTCTATCCTCTTTCAGATT

mRNA sequence

TTCAAACACTTCAACGTTCTTCTGCTTCTTCTTATGCTTCTGCTTCTTCTTCTTCTGCTGCTTCTGCTTCTGCTGCTTCTTCTTCTGCTTCTTCTTCTGCTCCTACTTCTGCTCCTTCTCCTTCTGCTTCTTCTCCTTCTGCTTCTCCTTCTGCTTCTCCTTCTGCCTCTGCCTTCTACTTCTGCCTCTGCCTTTTGCTTCTGCTTCTGCCTTCTGCTGCTTCTTCTGCTGCTACTTCTTCTGCTGCTTCTTCTTCTTCTTCTGCTTCCTCTTCTTCTTCTGCTTCCTCTTCTTCTTCTCCTTCCTCTTATTCTCCTTCTTCTTCTCCTCCTTCCTCTTCTGCTTCTTCTGCTTCTTCTGCTTCTTCTGCTTCTTCTGCTTCTTCTGCTTCTGCTGCTTCTGCTTCTGCTTCTGCTGCTTCTGCTTCTGCTTCTGCTTCTTCTTCTGCTCCTGCTTCTGCTCCTTCTCCTCCTGCTTCTTCTCCTTCTGCTTCTCCTTCTGCCTCTGCCTTCTACTTCTGCCTCTGCCTTTTTCTTCTGCTTCTGCCTTCTGCTGCTTCCTCTGCTTCTTCTGCTTCCTCTGCTGCTTCTGCTGCTGCTTCTGCTGCTTCTTCTGCTACTTCTTCTGCTTCTTCTTCTTCTTCTTCTGCTTCCTCTTCTTCTTCTGCTTCCTCTTCTTCTTCTCCTTCCTCTTCTTCTCCTTCTTCTTCTCCTCCTTCCTCTTCTTCTTCTGCTTCTTCTGCTTCTGCTTCTTCTCCTTCTTCTGCTTCTTCTCCTGCTTCTTTTCCTTCTTCTCCTTCTTCTTCTTCTTCTTCTCCTTCTTCTTCTGCTTCTTCTTCTTCTTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCTTCTTCTTCTTCTTCTTATGCTTCTTCTTCTGCTTCTGCTTCTTCTGCTTCTGCTTCTTCTCCTTCTCCTGCTTCTTCTCCTTCTTCTTCTCCTTCTTCTCCTTCTTCTCCTGCTTCTTCTGCTTCTTCTGCTTCTCCTCCTTCTTCTCCTCCTTCTTCTTCTCCTTCTTCTTCTCCTTCTTCTCCTTCTGCTCCTTCTTCTCCTTCTGCTTCTTCTCCTTCTGCTCCTTCTTCTTCTTCTGCTCCTTCTCCTCCTTCTTCTTCTGCTTCTTCTCCTCCTTCTTCTCCTCCTCCTTCTTCTGCTCCTTCTTCTTCTTCTGCTCCTTCTTCTTCTGCTTCTTTTTCTGCTCCTTCTTCTTCTTCTGCTTCTTCTTCTGCTCCTTCTTCTTCTCCTTCTCCTTCTTCTTCTCCTTCTTCTTCTTCTCCTTCTTCTTCTTCTCCTTCTTCTTCTCCTTCTTCTTCTCCTTCTTCTTCTAATCACCACATTTCTATCCTCTTTCAGATT

Coding sequence (CDS)

TTCAAACACTTCAACGTTCTTCTGCTTCTTCTTATGCTTCTGCTTCTTCTTCTTCTGCTGCTTCTGCTTCTGCTGCTTCTTCTTCTGCTTCTTCTTCTGCTCCTACTTCTGCTCCTTCTCCTTCTGCTTCTTCTCCTTCTGCTTCTCCTTCTGCTTCTCCTTCTGCCTCTGCCTTCTACTTCTGCCTCTGCCTTTTGCTTCTGCTTCTGCCTTCTGCTGCTTCTTCTGCTGCTACTTCTTCTGCTGCTTCTTCTTCTTCTTCTGCTTCCTCTTCTTCTTCTGCTTCCTCTTCTTCTTCTCCTTCCTCTTATTCTCCTTCTTCTTCTCCTCCTTCCTCTTCTGCTTCTTCTGCTTCTTCTGCTTCTTCTGCTTCTTCTGCTTCTTCTGCTTCTGCTGCTTCTGCTTCTGCTTCTGCTGCTTCTGCTTCTGCTTCTGCTTCTTCTTCTGCTCCTGCTTCTGCTCCTTCTCCTCCTGCTTCTTCTCCTTCTGCTTCTCCTTCTGCCTCTGCCTTCTACTTCTGCCTCTGCCTTTTTCTTCTGCTTCTGCCTTCTGCTGCTTCCTCTGCTTCTTCTGCTTCCTCTGCTGCTTCTGCTGCTGCTTCTGCTGCTTCTTCTGCTACTTCTTCTGCTTCTTCTTCTTCTTCTTCTGCTTCCTCTTCTTCTTCTGCTTCCTCTTCTTCTTCTCCTTCCTCTTCTTCTCCTTCTTCTTCTCCTCCTTCCTCTTCTTCTTCTGCTTCTTCTGCTTCTGCTTCTTCTCCTTCTTCTGCTTCTTCTCCTGCTTCTTTTCCTTCTTCTCCTTCTTCTTCTTCTTCTTCTCCTTCTTCTTCTGCTTCTTCTTCTTCTTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCTTCTTCTTCTTCTTCTTATGCTTCTTCTTCTGCTTCTGCTTCTTCTGCTTCTGCTTCTTCTCCTTCTCCTGCTTCTTCTCCTTCTTCTTCTCCTTCTTCTCCTTCTTCTCCTGCTTCTTCTGCTTCTTCTGCTTCTCCTCCTTCTTCTCCTCCTTCTTCTTCTCCTTCTTCTTCTCCTTCTTCTCCTTCTGCTCCTTCTTCTCCTTCTGCTTCTTCTCCTTCTGCTCCTTCTTCTTCTTCTGCTCCTTCTCCTCCTTCTTCTTCTGCTTCTTCTCCTCCTTCTTCTCCTCCTCCTTCTTCTGCTCCTTCTTCTTCTTCTGCTCCTTCTTCTTCTGCTTCTTTTTCTGCTCCTTCTTCTTCTTCTGCTTCTTCTTCTGCTCCTTCTTCTTCTCCTTCTCCTTCTTCTTCTCCTTCTTCTTCTTCTCCTTCTTCTTCTTCTCCTTCTTCTTCTCCTTCTTCTTCTCCTTCTTCTTCTAATCACCACATTTCTATCCTCTTTCAGATT

Protein sequence

FKHFNVLLLLLMLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLPLPSTSASAFCFCFCLLLLLLLLLLLLLLLLLLLPLLLLLPLLLLLPLILLLLLLLPLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLPLPSTSASAFFFCFCLLLLPLLLLLPLLLLLLLLLLLLLLLLLLLLLLLLPLLLLLPLLLLLPLLLLLLLLLPLLLLLLLLLLLLLLLLLLLLLFLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLMLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLFLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLITTFLSSFRX
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: INTERPRO
TermDefinition
IPR017452GPCR_Rhodpsn_7TM
IPR000515MetI-like
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G017940.1CsaV3_3G017940.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000515ABC transporter type 1, transmembrane domain MetI-likePROSITEPS50928ABC_TM1coord: 70..260
score: 10.104
IPR017452GPCR, rhodopsin-like, 7TMPROSITEPS50262G_PROTEIN_RECEP_F1_2coord: 4..306
score: 9.378

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None