CsaV3_3G014680 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G014680
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionPentatricopeptide repeat-containing protein
Locationchr3 : 10923416 .. 10927234 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATACTTCTAAGGAACAAAGGTAAGTCAGAATTTTTAGTTTTTGTTTGAATACAAATTGAAAGAACTAAACTAGTTGAAATCGTTTGTGGTAATAATCTATTTGAGAACCAACACTCTGGTTACCCCACCCAATTATGAACTTGCATCCATCATATGAACTTATCAGATTGTGGGCAAAGGAATAAGTTCTTTTGCTCCTGAAAGTTTGGGATTCATATTGACATCTGTTTTAGAAGTACTTCATGATTAGAGTAGGGATAGCCAGTGCCTTATGAGGTGTATATATGAGATACCATTTTAGCTATTGATTGACTGATAAAAAAATTGTGTTCCTTGCCTACAAGAATTGTTATTACAAACCATTGGACTCACTTGATGAGTCGTTAGGCTTTAATTAATATTTCCATCTTGGTCGTTGCTAGCTCAAATGGGAGCTTTAGGTTCTGGATTGAGTTCATGGGGCCATATGGGCCAAGTTTGGCTGTTAATTGATGAGCTCTGCTCCTTGCCTGAAAGATTCATAGGAATTGATGTTTACTTTTGGGTTGTAACCTTTAATTATTATCCCCTTAGGTGGTTGCTGTTGGATTACTCGGTTCATGGCTTTAATTCTGAGTATTTTTGTTAGAATGAAATAGTTATAGTTTTGAAAGACAGATGTGAGATTCTGTGAAATTGTAACAAAATTTTGGTCTTAGTTTCCTCAAAGAATTAGCAACATTTGATCATAGTGGTCAAGAACTCAGAAATGAACATTAAAAGTTGGCATTGAAAGAGTAAGCATCATCAGACCATAATTTGTTTAAGGTACATGTATTGGAGTAGCCTGTCAAAGGGAAGGTTGTAAGTCTTGAGGTCACAAGTTCATGTATTAGCAATTACCCACCTGATATGTTAATTTCTTTTAAGAAGCACTTGCTTGTTTCATGCCCCAGCAGTTGGCGTACTAGTGAAAGATTTGTGGTTCTGCTTCTCTTTTTCAGTTTTTAATTATCGTGTGTATACCTGCAAAGTTGTAGGTTCCTTGTCAGGTCCTTGTTTTTGTATTGACTTGGGTTGAATTTCCACGTCAATTATTCTTTATATCATCCATAATATTGATTTCAGGTTTTGTTTATTTCAGGTGCAGGACAAATCAATTGTCTTGATTTGAAGTGCGGAAACCCTATTAAATTTTCTGTTAGATTTTTTTCCTCGTGGATTGGGGATTCTTCTCAAACAACAAATGGAAATGGGGGCCCTGTTCCGGGTGGGGGTGATCTGTTGCCTTCAGCAAAGAATGAGAACAAGAGACAAGTTATTGATAGTGTGTGCCAAATTTTGGAGACTGGTCCTTGGGGATCTTCGGTTGAGAATAGGTTAGCAGAGCTTGACTTAAATCCAAATCCAGAATTGGTAATTGGAGTCTTAAGAAGGCTGAAGGACGTAAACAATGCAGTAAATTACTTTAGATGGGCTGAGAGATTAACAGACCGAGCACATTGCCGTGAAGCATACAATTCACTTCTCATGGTTATGGCAAGAACTAGAAAGTTTAATTGCTTGGAACAAATATTGGAAGAAATGAGTATTGCAGGTTTTGGCCCATCAAATAACACATGTATTGAAATTGTGCTAAGCTTTATCAAATCTCGCAAGCTTAGGGAAGCTTTTACATTTATCCAAACTATGAGAAAGTTAAAATTTCGCCCAGCCTTTTCGGCATACACAAATTTGATTGGTGCACTATCTACATCTCGTGATTCTGATTGCATGCTCACCTTATTTCAGCAAATGCAGGAGCTTGGCTATGCAGTTAATGTTCATTTATTCACAACTCTCATTCGTGTATTTGCTAGAGAGGGCCGAGTTGATGCTGCACTTTCTCTTTTGGATGAGATGAAGAGCAATTCTCTAGAACCAGATGTTGTTCTTTACAATGTCTGTATAGACTGTTTTGGAAAGGCTGGGAAGGTGGATATGGCTTGGAAATTTTTTCATGAAATGAAAGCTAATGGTTTAGTTCTTGATGATGTAACTTATACTAGCATGATAGGAGTTCTCTGTAAAGCCGACAGACTGAACGAAGCAGTTGAGCTATTTGAACATATGGATCAAAACAAGCAAGTGCCTTGTGCATATGCATACAATACTATGATCATGGGTTATGGTATGGCTGGAAAGTTTGAGGACGCGTACAGTCTGCTTGAGAGACAGAGAAGAAAGGGATGCATTCCAAGTGTTGTCTCATATAATTGCATTCTTTCATGTCTTGGGAGGAAGGGCCAAGTAGATGAGGCATTAAAAAAATTCGAAGAGATGAAGAAAGATGCAATTCCCAACCTTTCAACATATAATATTATGATTGACATGCTTTGTAAGGCTGGAAAACTCGAGACAGCGTTGGTTGTTCGGGATGCCATGAAAGATGCTGGGTTGTTCCCTAATGTTATTACAGTAAACATAATGGTTGACAGATTGTGTAAAGCCCAAAGACTTGATGACGCTTGTTCTATTTTTGAAGGATTGGATCATAAAACTTGCAGACCTGATGCAGTAACATACTGTTCTCTTATAGAAGGATTGGGTAGGCATGGGAGAGTGGATGAGGCCTACAAGCTATATGAACAGATGTTGGATGCTAACCAGATCCCAAATGCTGTTGTGTATACATCTCTCATAAGGAACTTTTTCAAATGTGGAAGGAAGGAGGATGGCCATAAGATATATAATGAAATGCTACGCCTCGGTTGTTCTCCTGACCTGCTACTTCTTAATACCTACATGGATTGCGTTTTTAAAGCTGGAGAAATTGAGAAGGGCAGGGCTTTGTTTCAGGAGATTAAGAACCTGGGATTTATTCCAGATGCGAGGAGTTATACAATCCTAATTCATGGCTTGGTGAAAGCAGGTTTTGCGCATGAAGCTTATGAGTTATTCTACACAATGAAGGAACAAGGTTGTGTTCTGGATACTCGAGCATATAACACTGTTATCGATGGATTCTGCAAGTCTGGTAAGGTAAATAAAGCTTACCAATTGCTTGAGGAGATGAAGACAAAGGGTCATGAACCCACTGTCGTTACTTATGGTTCTGTTATTGATGGACTTGCAAAGATTGACCGGCTTGATGAAGCATATATGCTCTTTGAAGAAGCAAAGTCGAAAGGTATAGAACTAAATGTTGTTATATACAGCAGTCTAATTGACGGATTTGGGAAGGTGGGCAGAATAGATGAAGCGTACTTGATCATGGAAGAGTTGATGCAAAAAGGTTTGACACCTAATGTATACACATGGAATTGTTTGCTTGATGCATTGGTGAAAGCAGAGGAAATTAGCGAAGCCCTTGTTTGCTTTCAGTCTATGAAAGACTTGAAATGTACTCCTAATTATATAACTTATAGCATTCTAATTCATGGTCTTTGTAAGATAAGAAAGTTCAATAAGGCATTTGTGTTCTGGCAAGAGATGCAGAAGCAAGGCTTTAAGCCTAACGTATTCACCTACACCACCATGATTTCAGGACTTGCTAAGGCTGGAAACATCGTGGAAGCAGACACTCTTTTCGAGAAGTTTAAGGAAAAGGGTGGTGTAGCTGATTCTGCTATTTACAATGCTATAATAGAAGGGCTAAGTAATGCAAATAGGGCATCGGATGCTTATAGACTTTTTGAAGAAGCTCGTTTGAAAGGTTGTAGTATTTACACCAAAACTTGTGTTGTTCTATTAGATTCACTGCATAAGGCTGAATGCATCGAGCAGGCTGCGATCGTGGGTGCTGTACTAAGAGAAACTGCAAAGGCTCAGCATGCTGCAAGATCTTGGACATAG

mRNA sequence

ATGAAGATACTTCTAAGGAACAAAGGTGCAGGACAAATCAATTGTCTTGATTTGAAGTGCGGAAACCCTATTAAATTTTCTGTTAGATTTTTTTCCTCGTGGATTGGGGATTCTTCTCAAACAACAAATGGAAATGGGGGCCCTGTTCCGGGTGGGGGTGATCTGTTGCCTTCAGCAAAGAATGAGAACAAGAGACAAGTTATTGATAGTGTGTGCCAAATTTTGGAGACTGGTCCTTGGGGATCTTCGGTTGAGAATAGGTTAGCAGAGCTTGACTTAAATCCAAATCCAGAATTGGTAATTGGAGTCTTAAGAAGGCTGAAGGACGTAAACAATGCAGTAAATTACTTTAGATGGGCTGAGAGATTAACAGACCGAGCACATTGCCGTGAAGCATACAATTCACTTCTCATGGTTATGGCAAGAACTAGAAAGTTTAATTGCTTGGAACAAATATTGGAAGAAATGAGTATTGCAGGTTTTGGCCCATCAAATAACACATGTATTGAAATTGTGCTAAGCTTTATCAAATCTCGCAAGCTTAGGGAAGCTTTTACATTTATCCAAACTATGAGAAAGTTAAAATTTCGCCCAGCCTTTTCGGCATACACAAATTTGATTGGTGCACTATCTACATCTCGTGATTCTGATTGCATGCTCACCTTATTTCAGCAAATGCAGGAGCTTGGCTATGCAGTTAATGTTCATTTATTCACAACTCTCATTCGTGTATTTGCTAGAGAGGGCCGAGTTGATGCTGCACTTTCTCTTTTGGATGAGATGAAGAGCAATTCTCTAGAACCAGATGTTGTTCTTTACAATGTCTGTATAGACTGTTTTGGAAAGGCTGGGAAGGTGGATATGGCTTGGAAATTTTTTCATGAAATGAAAGCTAATGGTTTAGTTCTTGATGATGTAACTTATACTAGCATGATAGGAGTTCTCTGTAAAGCCGACAGACTGAACGAAGCAGTTGAGCTATTTGAACATATGGATCAAAACAAGCAAGTGCCTTGTGCATATGCATACAATACTATGATCATGGGTTATGGTATGGCTGGAAAGTTTGAGGACGCGTACAGTCTGCTTGAGAGACAGAGAAGAAAGGGATGCATTCCAAGTGTTGTCTCATATAATTGCATTCTTTCATGTCTTGGGAGGAAGGGCCAAGTAGATGAGGCATTAAAAAAATTCGAAGAGATGAAGAAAGATGCAATTCCCAACCTTTCAACATATAATATTATGATTGACATGCTTTGTAAGGCTGGAAAACTCGAGACAGCGTTGGTTGTTCGGGATGCCATGAAAGATGCTGGGTTGTTCCCTAATGTTATTACAGTAAACATAATGGTTGACAGATTGTGTAAAGCCCAAAGACTTGATGACGCTTGTTCTATTTTTGAAGGATTGGATCATAAAACTTGCAGACCTGATGCAGTAACATACTGTTCTCTTATAGAAGGATTGGGTAGGCATGGGAGAGTGGATGAGGCCTACAAGCTATATGAACAGATGTTGGATGCTAACCAGATCCCAAATGCTGTTGTGTATACATCTCTCATAAGGAACTTTTTCAAATGTGGAAGGAAGGAGGATGGCCATAAGATATATAATGAAATGCTACGCCTCGGTTGTTCTCCTGACCTGCTACTTCTTAATACCTACATGGATTGCGTTTTTAAAGCTGGAGAAATTGAGAAGGGCAGGGCTTTGTTTCAGGAGATTAAGAACCTGGGATTTATTCCAGATGCGAGGAGTTATACAATCCTAATTCATGGCTTGGTGAAAGCAGGTTTTGCGCATGAAGCTTATGAGTTATTCTACACAATGAAGGAACAAGGTTGTGTTCTGGATACTCGAGCATATAACACTGTTATCGATGGATTCTGCAAGTCTGGTAAGGTAAATAAAGCTTACCAATTGCTTGAGGAGATGAAGACAAAGGGTCATGAACCCACTGTCGTTACTTATGGTTCTGTTATTGATGGACTTGCAAAGATTGACCGGCTTGATGAAGCATATATGCTCTTTGAAGAAGCAAAGTCGAAAGGTATAGAACTAAATGTTGTTATATACAGCAGTCTAATTGACGGATTTGGGAAGGTGGGCAGAATAGATGAAGCGTACTTGATCATGGAAGAGTTGATGCAAAAAGGTTTGACACCTAATGTATACACATGGAATTGTTTGCTTGATGCATTGGTGAAAGCAGAGGAAATTAGCGAAGCCCTTGTTTGCTTTCAGTCTATGAAAGACTTGAAATGTACTCCTAATTATATAACTTATAGCATTCTAATTCATGGTCTTTGTAAGATAAGAAAGTTCAATAAGGCATTTGTGTTCTGGCAAGAGATGCAGAAGCAAGGCTTTAAGCCTAACGTATTCACCTACACCACCATGATTTCAGGACTTGCTAAGGCTGGAAACATCGTGGAAGCAGACACTCTTTTCGAGAAGTTTAAGGAAAAGGGTGGTGTAGCTGATTCTGCTATTTACAATGCTATAATAGAAGGGCTAAGTAATGCAAATAGGGCATCGGATGCTTATAGACTTTTTGAAGAAGCTCGTTTGAAAGGTTGTAGTATTTACACCAAAACTTGTGTTGTTCTATTAGATTCACTGCATAAGGCTGAATGCATCGAGCAGGCTGCGATCGTGGGTGCTGTACTAAGAGAAACTGCAAAGGCTCAGCATGCTGCAAGATCTTGGACATAG

Coding sequence (CDS)

ATGAAGATACTTCTAAGGAACAAAGGTGCAGGACAAATCAATTGTCTTGATTTGAAGTGCGGAAACCCTATTAAATTTTCTGTTAGATTTTTTTCCTCGTGGATTGGGGATTCTTCTCAAACAACAAATGGAAATGGGGGCCCTGTTCCGGGTGGGGGTGATCTGTTGCCTTCAGCAAAGAATGAGAACAAGAGACAAGTTATTGATAGTGTGTGCCAAATTTTGGAGACTGGTCCTTGGGGATCTTCGGTTGAGAATAGGTTAGCAGAGCTTGACTTAAATCCAAATCCAGAATTGGTAATTGGAGTCTTAAGAAGGCTGAAGGACGTAAACAATGCAGTAAATTACTTTAGATGGGCTGAGAGATTAACAGACCGAGCACATTGCCGTGAAGCATACAATTCACTTCTCATGGTTATGGCAAGAACTAGAAAGTTTAATTGCTTGGAACAAATATTGGAAGAAATGAGTATTGCAGGTTTTGGCCCATCAAATAACACATGTATTGAAATTGTGCTAAGCTTTATCAAATCTCGCAAGCTTAGGGAAGCTTTTACATTTATCCAAACTATGAGAAAGTTAAAATTTCGCCCAGCCTTTTCGGCATACACAAATTTGATTGGTGCACTATCTACATCTCGTGATTCTGATTGCATGCTCACCTTATTTCAGCAAATGCAGGAGCTTGGCTATGCAGTTAATGTTCATTTATTCACAACTCTCATTCGTGTATTTGCTAGAGAGGGCCGAGTTGATGCTGCACTTTCTCTTTTGGATGAGATGAAGAGCAATTCTCTAGAACCAGATGTTGTTCTTTACAATGTCTGTATAGACTGTTTTGGAAAGGCTGGGAAGGTGGATATGGCTTGGAAATTTTTTCATGAAATGAAAGCTAATGGTTTAGTTCTTGATGATGTAACTTATACTAGCATGATAGGAGTTCTCTGTAAAGCCGACAGACTGAACGAAGCAGTTGAGCTATTTGAACATATGGATCAAAACAAGCAAGTGCCTTGTGCATATGCATACAATACTATGATCATGGGTTATGGTATGGCTGGAAAGTTTGAGGACGCGTACAGTCTGCTTGAGAGACAGAGAAGAAAGGGATGCATTCCAAGTGTTGTCTCATATAATTGCATTCTTTCATGTCTTGGGAGGAAGGGCCAAGTAGATGAGGCATTAAAAAAATTCGAAGAGATGAAGAAAGATGCAATTCCCAACCTTTCAACATATAATATTATGATTGACATGCTTTGTAAGGCTGGAAAACTCGAGACAGCGTTGGTTGTTCGGGATGCCATGAAAGATGCTGGGTTGTTCCCTAATGTTATTACAGTAAACATAATGGTTGACAGATTGTGTAAAGCCCAAAGACTTGATGACGCTTGTTCTATTTTTGAAGGATTGGATCATAAAACTTGCAGACCTGATGCAGTAACATACTGTTCTCTTATAGAAGGATTGGGTAGGCATGGGAGAGTGGATGAGGCCTACAAGCTATATGAACAGATGTTGGATGCTAACCAGATCCCAAATGCTGTTGTGTATACATCTCTCATAAGGAACTTTTTCAAATGTGGAAGGAAGGAGGATGGCCATAAGATATATAATGAAATGCTACGCCTCGGTTGTTCTCCTGACCTGCTACTTCTTAATACCTACATGGATTGCGTTTTTAAAGCTGGAGAAATTGAGAAGGGCAGGGCTTTGTTTCAGGAGATTAAGAACCTGGGATTTATTCCAGATGCGAGGAGTTATACAATCCTAATTCATGGCTTGGTGAAAGCAGGTTTTGCGCATGAAGCTTATGAGTTATTCTACACAATGAAGGAACAAGGTTGTGTTCTGGATACTCGAGCATATAACACTGTTATCGATGGATTCTGCAAGTCTGGTAAGGTAAATAAAGCTTACCAATTGCTTGAGGAGATGAAGACAAAGGGTCATGAACCCACTGTCGTTACTTATGGTTCTGTTATTGATGGACTTGCAAAGATTGACCGGCTTGATGAAGCATATATGCTCTTTGAAGAAGCAAAGTCGAAAGGTATAGAACTAAATGTTGTTATATACAGCAGTCTAATTGACGGATTTGGGAAGGTGGGCAGAATAGATGAAGCGTACTTGATCATGGAAGAGTTGATGCAAAAAGGTTTGACACCTAATGTATACACATGGAATTGTTTGCTTGATGCATTGGTGAAAGCAGAGGAAATTAGCGAAGCCCTTGTTTGCTTTCAGTCTATGAAAGACTTGAAATGTACTCCTAATTATATAACTTATAGCATTCTAATTCATGGTCTTTGTAAGATAAGAAAGTTCAATAAGGCATTTGTGTTCTGGCAAGAGATGCAGAAGCAAGGCTTTAAGCCTAACGTATTCACCTACACCACCATGATTTCAGGACTTGCTAAGGCTGGAAACATCGTGGAAGCAGACACTCTTTTCGAGAAGTTTAAGGAAAAGGGTGGTGTAGCTGATTCTGCTATTTACAATGCTATAATAGAAGGGCTAAGTAATGCAAATAGGGCATCGGATGCTTATAGACTTTTTGAAGAAGCTCGTTTGAAAGGTTGTAGTATTTACACCAAAACTTGTGTTGTTCTATTAGATTCACTGCATAAGGCTGAATGCATCGAGCAGGCTGCGATCGTGGGTGCTGTACTAAGAGAAACTGCAAAGGCTCAGCATGCTGCAAGATCTTGGACATAG

Protein sequence

MKILLRNKGAGQINCLDLKCGNPIKFSVRFFSSWIGDSSQTTNGNGGPVPGGGDLLPSAKNENKRQVIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFRWAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRETAKAQHAARSWT
Homology
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BLAST of CsaV3_3G014680 vs. NCBI nr
Match: XP_004134213.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g06920 [Cucumis sativus] >KGN57112.1 hypothetical protein Csa_3G154350 [Cucumis sativus])

HSP 1 Score: 367.1 bits (941), Expect = 1.7e-97
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0 

Query: 1   MKILLRNKGAGQINCLDLKCGNPIKFSVRFFSSWIGDSSQTTNGNGGPVPGGGDLLPSAK 60
           MKILLRNKGAGQINCLDLKCGNPIKFSVRFFSSWIGDSSQTTNGNGGPVPGGGDLLPSAK
Sbjct: 1   MKILLRNKGAGQINCLDLKCGNPIKFSVRFFSSWIGDSSQTTNGNGGPVPGGGDLLPSAK 60

Query: 61  NENKRQVIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFRWA 120
           NENKRQVIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFRWA
Sbjct: 61  NENKRQVIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFRWA 120

Query: 121 ERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKS 179
           ERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKS
Sbjct: 121 ERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKS 178

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BLAST of CsaV3_3G014680 vs. NCBI nr
Match: XP_016898965.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g06920 isoform X2 [Cucumis melo])

HSP 1 Score: 340.9 bits (873), Expect = 1.3e-89
Identity = 165/176 (93.75%), Postives = 170/176 (96.59%), Query Frame = 0 

Query: 1   MKILLRNKGAGQINCLDLKCGNPIKFSVRFFSSWIGDSSQTTNGNGGPVPGGGDLLPSAK 60
           MK+LLRNKGAGQINCLDLK GNPIKFSVRFFSSWIGDSSQTTNGNGGPV GGGDLLPSAK
Sbjct: 1   MKMLLRNKGAGQINCLDLKYGNPIKFSVRFFSSWIGDSSQTTNGNGGPVSGGGDLLPSAK 60

Query: 61  NENKRQVIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFRWA 120
           NENKRQV+D VCQILETGPWGSSVENRLAEL +NPNPELVIGVLRRLKDVNNAVNYFRWA
Sbjct: 61  NENKRQVVDGVCQILETGPWGSSVENRLAELHINPNPELVIGVLRRLKDVNNAVNYFRWA 120

Query: 121 ERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFI 177
           ER+TD+AH  EAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFI
Sbjct: 121 ERVTDQAHSHEAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFI 176

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BLAST of CsaV3_3G014680 vs. NCBI nr
Match: XP_016898964.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g06920 isoform X1 [Cucumis melo])

HSP 1 Score: 334.7 bits (857), Expect = 9.6e-88
Identity = 165/181 (91.16%), Postives = 170/181 (93.92%), Query Frame = 0 

Query: 1   MKILLRNK-----GAGQINCLDLKCGNPIKFSVRFFSSWIGDSSQTTNGNGGPVPGGGDL 60
           MK+LLRNK     GAGQINCLDLK GNPIKFSVRFFSSWIGDSSQTTNGNGGPV GGGDL
Sbjct: 1   MKMLLRNKGYLISGAGQINCLDLKYGNPIKFSVRFFSSWIGDSSQTTNGNGGPVSGGGDL 60

Query: 61  LPSAKNENKRQVIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAVN 120
           LPSAKNENKRQV+D VCQILETGPWGSSVENRLAEL +NPNPELVIGVLRRLKDVNNAVN
Sbjct: 61  LPSAKNENKRQVVDGVCQILETGPWGSSVENRLAELHINPNPELVIGVLRRLKDVNNAVN 120

Query: 121 YFRWAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSF 177
           YFRWAER+TD+AH  EAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSF
Sbjct: 121 YFRWAERVTDQAHSHEAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSF 180

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BLAST of CsaV3_3G014680 vs. NCBI nr
Match: XP_022973661.1 (pentatricopeptide repeat-containing protein At3g06920-like [Cucurbita maxima] >XP_022975162.1 pentatricopeptide repeat-containing protein At3g06920-like isoform X1 [Cucurbita maxima] >XP_022975163.1 pentatricopeptide repeat-containing protein At3g06920-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 272.3 bits (695), Expect = 5.8e-69
Identity = 138/178 (77.53%), Postives = 152/178 (85.39%), Query Frame = 0 

Query: 1   MKILLRNKGAGQINCLDLKCGNPIKFSVRFFSSWIGDSSQTTNGNGGPVPGGGDLLPSAK 60
           MK+LLR+KGAGQI CL LK  NP  FSV+  SS I +SS+ TNGNG PV  G +L+ SAK
Sbjct: 1   MKMLLRSKGAGQIYCLALKFKNPFSFSVKLLSSCIENSSR-TNGNGAPVSDGCNLVSSAK 60

Query: 61  NENKRQVIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFRWA 120
           NE+KR ++DSVCQILE GPW  SVEN LAELD+ PNPELVIGVLRRLKDVN AVNYFRWA
Sbjct: 61  NEDKRLIVDSVCQILEAGPWRPSVENALAELDVKPNPELVIGVLRRLKDVNVAVNYFRWA 120

Query: 121 ERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKS 179
           ER+TD+A C EAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEI+LS IKS
Sbjct: 121 ERVTDQASCPEAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIILSLIKS 177

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BLAST of CsaV3_3G014680 vs. NCBI nr
Match: XP_023540644.1 (pentatricopeptide repeat-containing protein At3g06920 [Cucurbita pepo subsp. pepo] >XP_023540645.1 pentatricopeptide repeat-containing protein At3g06920 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 268.5 bits (685), Expect = 8.4e-68
Identity = 136/178 (76.40%), Postives = 152/178 (85.39%), Query Frame = 0 

Query: 1   MKILLRNKGAGQINCLDLKCGNPIKFSVRFFSSWIGDSSQTTNGNGGPVPGGGDLLPSAK 60
           MK+LLR+KGAGQI CL LK   P  FSV+  SS I +SS+ TNGNG PV  G +L+PSAK
Sbjct: 1   MKMLLRSKGAGQIYCLALKFKTPFSFSVKLLSSCIENSSR-TNGNGAPVLDGCNLVPSAK 60

Query: 61  NENKRQVIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFRWA 120
           NE+KR ++DSVCQILE GPW  SVEN LAELD+ PNPELVIGVLRRLKDVN AVNYFRW+
Sbjct: 61  NEDKRLIVDSVCQILEAGPWRPSVENALAELDVKPNPELVIGVLRRLKDVNVAVNYFRWS 120

Query: 121 ERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKS 179
           ER+TD+A C EAYNSLLMV+ARTRKF+CLEQILEEMSIAGFGPSNNTCIEIVLS IKS
Sbjct: 121 ERVTDQASCPEAYNSLLMVLARTRKFDCLEQILEEMSIAGFGPSNNTCIEIVLSLIKS 177

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BLAST of CsaV3_3G014680 vs. TAIR10
Match: AT3G06920.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 163.3 bits (412), Expect = 6.9e-40
Identity = 74/117 (63.25%), Postives = 89/117 (76.07%), Query Frame = 0 

Query: 62  ENKRQVIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFRWAE 121
           E  RQ ++ +C +LETGPWG S EN L+ L   P PE VIGVLRRLKDVN A+ YFRW E
Sbjct: 30  EGNRQTVNDICNVLETGPWGPSAENTLSALSFKPQPEFVIGVLRRLKDVNRAIEYFRWYE 89

Query: 122 RLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKS 179
           R T+  HC E+YNSLL+VMAR R F+ L+QIL EMS+AGFGPS NTCIE+VL  +K+
Sbjct: 90  RRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKA 146

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BLAST of CsaV3_3G014680 vs. TAIR10
Match: AT5G15980.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 56.6 bits (135), Expect = 9.1e-08
Identity = 30/119 (25.21%), Postives = 59/119 (49.58%), Query Frame = 0 

Query: 61  NENKRQVIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLK-DVNNAVNYFRW 120
           + +   V D VC+I+    WG  VE R+ +L++    +LV  ++ RL  +   A+ +FRW
Sbjct: 217 DNSAENVCDRVCKIVMKEEWGDDVEKRVRDLNVEFKSDLVKMIVERLDVEPRKALLFFRW 276

Query: 121 AERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKS 179
            +      H  + YN++  V+ + +  +  + I+ EM  AG+     T + +   F ++
Sbjct: 277 IDESDLFKHDEKTYNAMARVLGKEKFLDRFQNIVVEMRSAGYEVEIETYVRVSTRFCQT 335

[Close]
BLAST of CsaV3_3G014680 vs. TAIR10
Match: AT3G62540.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 55.8 bits (133), Expect = 1.6e-07
Identity = 29/95 (30.53%), Postives = 52/95 (54.74%), Query Frame = 0 

Query: 68  IDSVCQIL-ETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNN-AVNYFRWAERLTD 127
           ++ VC+++ E      ++E  L E+ L+ + +L++ VL R +     A  +F WA     
Sbjct: 131 VERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQG 190

Query: 128 RAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAG 161
            AH    YNS++ ++A+TR+F  +  +LEEM   G
Sbjct: 191 FAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKG 225

[Close]
BLAST of CsaV3_3G014680 vs. TAIR10
Match: AT2G37230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 54.7 bits (130), Expect = 3.5e-07
Identity = 26/101 (25.74%), Postives = 52/101 (51.49%), Query Frame = 0 

Query: 60  KNENKRQVIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFRW 119
           K +N  ++ D++C++++   W + ++N + +L    +  LV  VL   K + +A+ +FRW
Sbjct: 80  KRQNHEKLEDTICRMMDNRAWTTRLQNSIRDLVPEWDHSLVYNVLHGAKKLEHALQFFRW 139

Query: 120 AERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAG 161
            ER     H R+ +  ++ ++    K N    IL +M   G
Sbjct: 140 TERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKG 180

[Close]
BLAST of CsaV3_3G014680 vs. TAIR10
Match: AT3G62470.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 54.7 bits (130), Expect = 3.5e-07
Identity = 29/95 (30.53%), Postives = 52/95 (54.74%), Query Frame = 0 

Query: 68  IDSVCQIL-ETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNN-AVNYFRWAERLTD 127
           ++ VC+++ E      ++E  L E+ L+ + +L++ VL R +     A  +F WA     
Sbjct: 131 VERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQG 190

Query: 128 RAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAG 161
            AH    YNS++ ++A+TR+F  +  +LEEM   G
Sbjct: 191 FAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKG 225

[Close]
BLAST of CsaV3_3G014680 vs. Swiss-Prot
Match: sp|Q9M907|PP217_ARATH (Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana OX=3702 GN=At3g06920 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.3e-38
Identity = 74/117 (63.25%), Postives = 89/117 (76.07%), Query Frame = 0 

Query: 62  ENKRQVIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFRWAE 121
           E  RQ ++ +C +LETGPWG S EN L+ L   P PE VIGVLRRLKDVN A+ YFRW E
Sbjct: 30  EGNRQTVNDICNVLETGPWGPSAENTLSALSFKPQPEFVIGVLRRLKDVNRAIEYFRWYE 89

Query: 122 RLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKS 179
           R T+  HC E+YNSLL+VMAR R F+ L+QIL EMS+AGFGPS NTCIE+VL  +K+
Sbjct: 90  RRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKA 146

[Close]
BLAST of CsaV3_3G014680 vs. Swiss-Prot
Match: sp|Q8LPF1|PP387_ARATH (Pentatricopeptide repeat-containing protein At5g15980, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15980 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.6e-06
Identity = 30/119 (25.21%), Postives = 59/119 (49.58%), Query Frame = 0 

Query: 61  NENKRQVIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLK-DVNNAVNYFRW 120
           + +   V D VC+I+    WG  VE R+ +L++    +LV  ++ RL  +   A+ +FRW
Sbjct: 217 DNSAENVCDRVCKIVMKEEWGDDVEKRVRDLNVEFKSDLVKMIVERLDVEPRKALLFFRW 276

Query: 121 AERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKS 179
            +      H  + YN++  V+ + +  +  + I+ EM  AG+     T + +   F ++
Sbjct: 277 IDESDLFKHDEKTYNAMARVLGKEKFLDRFQNIVVEMRSAGYEVEIETYVRVSTRFCQT 335

[Close]
BLAST of CsaV3_3G014680 vs. Swiss-Prot
Match: sp|Q3EAF8|PP294_ARATH (Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62540 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 2.8e-06
Identity = 29/95 (30.53%), Postives = 52/95 (54.74%), Query Frame = 0 

Query: 68  IDSVCQIL-ETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNN-AVNYFRWAERLTD 127
           ++ VC+++ E      ++E  L E+ L+ + +L++ VL R +     A  +F WA     
Sbjct: 131 VERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQG 190

Query: 128 RAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAG 161
            AH    YNS++ ++A+TR+F  +  +LEEM   G
Sbjct: 191 FAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKG 225

[Close]
BLAST of CsaV3_3G014680 vs. Swiss-Prot
Match: sp|Q9ZUU3|PP190_ARATH (Pentatricopeptide repeat-containing protein At2g37230 OS=Arabidopsis thaliana OX=3702 GN=At2g37230 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 6.3e-06
Identity = 26/101 (25.74%), Postives = 52/101 (51.49%), Query Frame = 0 

Query: 60  KNENKRQVIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFRW 119
           K +N  ++ D++C++++   W + ++N + +L    +  LV  VL   K + +A+ +FRW
Sbjct: 80  KRQNHEKLEDTICRMMDNRAWTTRLQNSIRDLVPEWDHSLVYNVLHGAKKLEHALQFFRW 139

Query: 120 AERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAG 161
            ER     H R+ +  ++ ++    K N    IL +M   G
Sbjct: 140 TERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKG 180

[Close]
BLAST of CsaV3_3G014680 vs. Swiss-Prot
Match: sp|Q9LZP3|PP293_ARATH (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62470 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 6.3e-06
Identity = 29/95 (30.53%), Postives = 52/95 (54.74%), Query Frame = 0 

Query: 68  IDSVCQIL-ETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNN-AVNYFRWAERLTD 127
           ++ VC+++ E      ++E  L E+ L+ + +L++ VL R +     A  +F WA     
Sbjct: 131 VERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQG 190

Query: 128 RAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAG 161
            AH    YNS++ ++A+TR+F  +  +LEEM   G
Sbjct: 191 FAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKG 225

[Close]
BLAST of CsaV3_3G014680 vs. TrEMBL
Match: tr|A0A0A0L914|A0A0A0L914_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G154350 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 1.2e-97
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0 

Query: 1   MKILLRNKGAGQINCLDLKCGNPIKFSVRFFSSWIGDSSQTTNGNGGPVPGGGDLLPSAK 60
           MKILLRNKGAGQINCLDLKCGNPIKFSVRFFSSWIGDSSQTTNGNGGPVPGGGDLLPSAK
Sbjct: 1   MKILLRNKGAGQINCLDLKCGNPIKFSVRFFSSWIGDSSQTTNGNGGPVPGGGDLLPSAK 60

Query: 61  NENKRQVIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFRWA 120
           NENKRQVIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFRWA
Sbjct: 61  NENKRQVIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFRWA 120

Query: 121 ERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKS 179
           ERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKS
Sbjct: 121 ERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKS 178

[Close]
BLAST of CsaV3_3G014680 vs. TrEMBL
Match: tr|A0A1S4DTD7|A0A1S4DTD7_CUCME (pentatricopeptide repeat-containing protein At3g06920 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483846 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 8.8e-90
Identity = 165/176 (93.75%), Postives = 170/176 (96.59%), Query Frame = 0 

Query: 1   MKILLRNKGAGQINCLDLKCGNPIKFSVRFFSSWIGDSSQTTNGNGGPVPGGGDLLPSAK 60
           MK+LLRNKGAGQINCLDLK GNPIKFSVRFFSSWIGDSSQTTNGNGGPV GGGDLLPSAK
Sbjct: 1   MKMLLRNKGAGQINCLDLKYGNPIKFSVRFFSSWIGDSSQTTNGNGGPVSGGGDLLPSAK 60

Query: 61  NENKRQVIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFRWA 120
           NENKRQV+D VCQILETGPWGSSVENRLAEL +NPNPELVIGVLRRLKDVNNAVNYFRWA
Sbjct: 61  NENKRQVVDGVCQILETGPWGSSVENRLAELHINPNPELVIGVLRRLKDVNNAVNYFRWA 120

Query: 121 ERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFI 177
           ER+TD+AH  EAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFI
Sbjct: 121 ERVTDQAHSHEAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFI 176

[Close]
BLAST of CsaV3_3G014680 vs. TrEMBL
Match: tr|A0A1S4DSK3|A0A1S4DSK3_CUCME (pentatricopeptide repeat-containing protein At3g06920 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483846 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 6.3e-88
Identity = 165/181 (91.16%), Postives = 170/181 (93.92%), Query Frame = 0 

Query: 1   MKILLRNK-----GAGQINCLDLKCGNPIKFSVRFFSSWIGDSSQTTNGNGGPVPGGGDL 60
           MK+LLRNK     GAGQINCLDLK GNPIKFSVRFFSSWIGDSSQTTNGNGGPV GGGDL
Sbjct: 1   MKMLLRNKGYLISGAGQINCLDLKYGNPIKFSVRFFSSWIGDSSQTTNGNGGPVSGGGDL 60

Query: 61  LPSAKNENKRQVIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAVN 120
           LPSAKNENKRQV+D VCQILETGPWGSSVENRLAEL +NPNPELVIGVLRRLKDVNNAVN
Sbjct: 61  LPSAKNENKRQVVDGVCQILETGPWGSSVENRLAELHINPNPELVIGVLRRLKDVNNAVN 120

Query: 121 YFRWAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSF 177
           YFRWAER+TD+AH  EAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSF
Sbjct: 121 YFRWAERVTDQAHSHEAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSF 180

[Close]
BLAST of CsaV3_3G014680 vs. TrEMBL
Match: tr|A0A2I4DG04|A0A2I4DG04_9ROSI (pentatricopeptide repeat-containing protein At3g06920 OS=Juglans regia OX=51240 GN=LOC108979781 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.2e-48
Identity = 107/177 (60.45%), Postives = 130/177 (73.45%), Query Frame = 0 

Query: 1   MKILLRNKGAGQINCLDLKCGNPIKFSVRFFSSWIGDSSQTTNGNGGPVPGGGDLLPSAK 60
           MK +LRN   G +  +DL+C +   FS +F SS+ G SS+  NG   P   G +   S  
Sbjct: 1   MKTILRN--LGLVYQIDLECCHIYTFSKKFSSSFNGFSSE-LNGKAIPFMDGANRENSRI 60

Query: 61  NENKRQVIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFRWA 120
            +  RQV+D VC ILE GPWG ++EN L  LD  P PELVIGVLRRLKD+N AVNYFRWA
Sbjct: 61  VQGVRQVVDDVCHILEGGPWGPALENALCVLDEKPKPELVIGVLRRLKDINIAVNYFRWA 120

Query: 121 ERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIK 178
           ER TD+AHC EAYNSLLM+MAR+RKF+ L +ILEEMSIAGFGPSNNTC+E+V+S+IK
Sbjct: 121 ERKTDQAHCPEAYNSLLMIMARSRKFDGLVEILEEMSIAGFGPSNNTCVELVVSYIK 174

[Close]
BLAST of CsaV3_3G014680 vs. TrEMBL
Match: tr|A0A2P4JLQ1|A0A2P4JLQ1_QUESU (Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_28135 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 6.0e-46
Identity = 108/176 (61.36%), Postives = 128/176 (72.73%), Query Frame = 0 

Query: 3   ILLRNKGAGQINCLDLKCGNPIKFSVRFFSSWIGDSSQTTNGNGGPVPGGGDLLPSAKNE 62
           +LLRN+G   I  +DLKC + I  S + FSS     S+  +G   P     +   S K E
Sbjct: 1   MLLRNQGL--IYQIDLKCSH-IYTSFKKFSSLYNGPSE-VDGKVVPFLDEANRESSRKVE 60

Query: 63  NKRQVIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFRWAER 122
             RQ +D+VC ILE+GPWG ++E+ L+ LD  P PELVIGVLRRLKDVN AVNYFRWAER
Sbjct: 61  GVRQALDNVCHILESGPWGPALEDALSLLDEKPKPELVIGVLRRLKDVNVAVNYFRWAER 120

Query: 123 LTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKS 179
            TD+AH  EAYNSLLMVMAR RKFNCLE+ILEEMSIAGFGPSNN CIE+V+S +KS
Sbjct: 121 KTDQAHSPEAYNSLLMVMARGRKFNCLEEILEEMSIAGFGPSNNVCIELVVSCVKS 172

The following BLAST results are available for this feature:
BLAST of CsaV3_3G014680 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004134213.11.7e-97100.00PREDICTED: pentatricopeptide repeat-containing protein At3g06920 [Cucumis sativu... [more]
XP_016898965.11.3e-8993.75PREDICTED: pentatricopeptide repeat-containing protein At3g06920 isoform X2 [Cuc... [more]
XP_016898964.19.6e-8891.16PREDICTED: pentatricopeptide repeat-containing protein At3g06920 isoform X1 [Cuc... [more]
XP_022973661.15.8e-6977.53pentatricopeptide repeat-containing protein At3g06920-like [Cucurbita maxima] >X... [more]
XP_023540644.18.4e-6876.40pentatricopeptide repeat-containing protein At3g06920 [Cucurbita pepo subsp. pep... [more]
BLAST of CsaV3_3G014680 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G06920.16.9e-4063.25Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G15980.19.1e-0825.21Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G62540.11.6e-0730.53Pentatricopeptide repeat (PPR) superfamily protein[more]
AT2G37230.13.5e-0725.74Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G62470.13.5e-0730.53Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of CsaV3_3G014680 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9M907|PP217_ARATH1.3e-3863.25Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana OX... [more]
sp|Q8LPF1|PP387_ARATH1.6e-0625.21Pentatricopeptide repeat-containing protein At5g15980, mitochondrial OS=Arabidop... [more]
sp|Q3EAF8|PP294_ARATH2.8e-0630.53Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidop... [more]
sp|Q9ZUU3|PP190_ARATH6.3e-0625.74Pentatricopeptide repeat-containing protein At2g37230 OS=Arabidopsis thaliana OX... [more]
sp|Q9LZP3|PP293_ARATH6.3e-0630.53Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidop... [more]
BLAST of CsaV3_3G014680 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L914|A0A0A0L914_CUCSA1.2e-97100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G154350 PE=4 SV=1[more]
tr|A0A1S4DTD7|A0A1S4DTD7_CUCME8.8e-9093.75pentatricopeptide repeat-containing protein At3g06920 isoform X2 OS=Cucumis melo... [more]
tr|A0A1S4DSK3|A0A1S4DSK3_CUCME6.3e-8891.16pentatricopeptide repeat-containing protein At3g06920 isoform X1 OS=Cucumis melo... [more]
tr|A0A2I4DG04|A0A2I4DG04_9ROSI2.2e-4860.45pentatricopeptide repeat-containing protein At3g06920 OS=Juglans regia OX=51240 ... [more]
tr|A0A2P4JLQ1|A0A2P4JLQ1_QUESU6.0e-4661.36Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_2... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G014680.1CsaV3_3G014680.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 80..214
e-value: 1.9E-14
score: 55.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 215..365
e-value: 3.5E-44
score: 153.4
coord: 512..647
e-value: 9.3E-38
score: 132.3
coord: 718..904
e-value: 3.9E-42
score: 146.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 366..435
e-value: 5.6E-20
score: 73.6
coord: 436..511
e-value: 6.7E-21
score: 76.6
coord: 648..717
e-value: 1.1E-18
score: 69.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILYSSF48452TPR-likecoord: 385..432
coord: 493..572
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 831..860
e-value: 0.0099
score: 16.0
coord: 515..545
e-value: 1.0E-4
score: 22.2
coord: 342..371
e-value: 1.4E-5
score: 24.9
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 152..210
e-value: 3.1E-4
score: 20.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 655..689
e-value: 1.8E-6
score: 25.8
coord: 621..654
e-value: 1.0E-10
score: 39.1
coord: 306..337
e-value: 9.9E-7
score: 26.6
coord: 515..548
e-value: 8.5E-8
score: 29.9
coord: 445..479
e-value: 8.7E-5
score: 20.4
coord: 760..794
e-value: 1.1E-10
score: 39.0
coord: 480..513
e-value: 2.0E-8
score: 31.9
coord: 690..724
e-value: 4.7E-7
score: 27.6
coord: 553..584
e-value: 2.6E-4
score: 18.9
coord: 271..304
e-value: 1.2E-9
score: 35.7
coord: 586..619
e-value: 2.9E-8
score: 31.4
coord: 411..444
e-value: 2.4E-8
score: 31.6
coord: 725..758
e-value: 6.3E-8
score: 30.3
coord: 237..270
e-value: 9.0E-9
score: 33.0
coord: 376..403
e-value: 3.6E-7
score: 27.9
coord: 795..828
e-value: 1.3E-7
score: 29.3
coord: 831..861
e-value: 2.4E-4
score: 19.1
coord: 341..374
e-value: 1.4E-7
score: 29.3
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 722..771
e-value: 1.6E-16
score: 60.1
coord: 268..317
e-value: 9.2E-17
score: 60.9
coord: 618..666
e-value: 2.3E-17
score: 62.8
coord: 373..421
e-value: 1.9E-16
score: 59.9
coord: 553..596
e-value: 9.0E-8
score: 32.1
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 230..262
e-value: 1.0E-6
score: 28.3
coord: 789..819
e-value: 6.7E-9
score: 35.2
coord: 474..505
e-value: 2.9E-11
score: 42.8
coord: 683..714
e-value: 2.1E-8
score: 33.6
coord: 439..468
e-value: 2.3E-7
score: 30.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 408..442
score: 12.353
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 164..198
score: 7.563
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 688..722
score: 12.408
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 199..233
score: 7.52
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 793..827
score: 11.049
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 234..268
score: 12.101
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 723..757
score: 11.093
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 618..652
score: 14.261
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 513..547
score: 12.014
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 478..512
score: 12.836
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 269..303
score: 11.992
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 758..792
score: 12.638
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 339..373
score: 11.509
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 129..163
score: 8.035
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 304..338
score: 11.838
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 583..617
score: 11.498
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 548..582
score: 9.273
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 828..862
score: 10.304
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 653..687
score: 11.093
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 374..404
score: 10.709
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 443..477
score: 9.997
NoneNo IPR availablePANTHERPTHR24015:SF555SUBFAMILY NOT NAMEDcoord: 796..883
coord: 54..802
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 796..883
coord: 54..802
NoneNo IPR availableSUPERFAMILYSSF81901HCP-likecoord: 630..856
NoneNo IPR availableSUPERFAMILYSSF81901HCP-likecoord: 280..403

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G014680CSPI03G14460Wild cucumber (PI 183967)cpicucB144
CsaV3_3G014680Cucsa.253050Cucumber (Gy14) v1cgycucB387
CsaV3_3G014680CmaCh00G004040Cucurbita maxima (Rimu)cmacucB0008
CsaV3_3G014680CmoCh06G014980Cucurbita moschata (Rifu)cmocucB0953
CsaV3_3G014680Cp4.1LG08g05010Cucurbita pepo (Zucchini)cpecucB1056
CsaV3_3G014680CsGy3G014600Cucumber (Gy14) v2cgybcucB117
CsaV3_3G014680Carg17341Silver-seed gourdcarcucB0640
CsaV3_3G014680Cla021744Watermelon (97103) v1cucwmB239
CsaV3_3G014680MELO3C006667Melon (DHL92) v3.5.1cucmeB236
CsaV3_3G014680ClCG05G006130Watermelon (Charleston Gray)cucwcgB225
CsaV3_3G014680Lsi05G015430Bottle gourd (USVL1VR-Ls)cuclsiB218
CsaV3_3G014680Cla97C05G087650Watermelon (97103) v2cucwmbB206
CsaV3_3G014680Bhi01G000722Wax gourdcucwgoB272
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G014680Silver-seed gourdcarcucB0079
CsaV3_3G014680Silver-seed gourdcarcucB0741
CsaV3_3G014680Silver-seed gourdcarcucB0878
CsaV3_3G014680Cucumber (Gy14) v2cgybcucB030
CsaV3_3G014680Cucurbita maxima (Rimu)cmacucB0291
CsaV3_3G014680Cucurbita maxima (Rimu)cmacucB0425
CsaV3_3G014680Cucurbita maxima (Rimu)cmacucB0433
CsaV3_3G014680Cucurbita maxima (Rimu)cmacucB0965
CsaV3_3G014680Cucurbita maxima (Rimu)cmacucB1049
CsaV3_3G014680Cucurbita moschata (Rifu)cmocucB0283
CsaV3_3G014680Cucurbita moschata (Rifu)cmocucB0420
CsaV3_3G014680Cucurbita moschata (Rifu)cmocucB0428
CsaV3_3G014680Cucurbita moschata (Rifu)cmocucB1032
CsaV3_3G014680Cucurbita pepo (Zucchini)cpecucB0154
CsaV3_3G014680Cucurbita pepo (Zucchini)cpecucB0379
CsaV3_3G014680Cucurbita pepo (Zucchini)cpecucB0759
CsaV3_3G014680Wild cucumber (PI 183967)cpicucB033
CsaV3_3G014680Bottle gourd (USVL1VR-Ls)cuclsiB163
CsaV3_3G014680Melon (DHL92) v3.5.1cucmeB176
CsaV3_3G014680Melon (DHL92) v3.5.1cucmeB198
CsaV3_3G014680Melon (DHL92) v3.6.1cucmedB167
CsaV3_3G014680Melon (DHL92) v3.6.1cucmedB189
CsaV3_3G014680Melon (DHL92) v3.6.1cucmedB230
CsaV3_3G014680Watermelon (Charleston Gray)cucwcgB254
CsaV3_3G014680Watermelon (97103) v1cucwmB288
CsaV3_3G014680Watermelon (97103) v2cucwmbB233
CsaV3_3G014680Wax gourdcucwgoB262
CsaV3_3G014680Cucumber (Chinese Long) v3cuccucB026