CsaV3_3G005180 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G005180
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	AT hook motif-containing protein, putative
Location	chr3 : 4320334 .. 4331155 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTTTGTAATGTCGCCTCCAAGAAAAACTATATTTTAACCCTCAAGATTTTGAAACTTCCATTTCCACCTCAATCTCAGTCCTCTCTTCCCCGTCTCAACGGAAAGTCTCCAGCTCTCTCTATTTTTCTCATCAACATTCTTTTTCTCTTTTTATTTTGCCCTAACTTACATTGCTTCCTCTCACCATTTACCTCTCTCCCACTTTCCTTATATAACTTCTTTCTCTTCTCAATTTGCTCCTCAATACTCCTCACCCAGGTATGTCGATTTTCTTTCACATGTTACTCTTCTTTATCTGGCTCTCTATTCCTCTACGTTTTTTTGTCTTTTTTTTTTTTTTTTTGCTTTTTACACAAATGTGTAATTTTTAGACGTCATTTCCATGATTCCTCTGGTGGGGTTTTCGATTTCTAGCTATTTTGATTTGTTTTTCTACATTTCTTTTTACGGTTGGCCAGAATATGGCCTTTGAAATGCTGTTACTTGCTTTTATTTGGGGATTTTCTTCAGCTCCAGTTCAAGGATTTTTTTTTTTTTCCTTCTTAATTCTGCTGGCTAAGTTTGTTCAGACAGGATTTTGATTGTGTTGCATGCATTGGGTTTTCTCATTGGGATTCAAATAAATAAATAAATTCTGAGGTATGTTTGAGGATGGCGATCTGTTACAATGACTTCTTGTGGGGTTCTTCATTGGTGGACAAGAGTTCTACAGGCTGCAATCTTTTTTTCCCCTTATTTATGATGTTCAGATTTAGCTAGTTTTTGTTGTGGCCTTTATGCAAAGTAGACTTATGTTTTTTTTTTTTTTTTCTATGAAAGGATTCAAAATTTCGTAGGAGTCCTAGGAACAGGGTATGGAAGAAGAATTACGCTTTTGACTATGTTCCAGGTTAATTGAGCTTTGTGCGACGGCTAAGACGATTAAGGAAAAACGTAGCCCAACTTAGTAGACATATTTATGAGAAATCCTGCTTGGGAAAATTGCTTGGACACAGTTCATTTTGATGGACTATTTTCTTTTAATAATTTAAATAAAAATTTAATGCTTAAGGAAATTGAATAAATGATCGGGGTTTATTTGATTGGGTTCCTCTTGTACCTTTGAATAAATGAACACATTCGTAAAGAAAAAACTATAGTTACATAATGAAACATTGACATGAAAGAGGGAAGGAGGTGGGGGGAGGGAGCAACATGGACATGGGAAGGGAGAGAAATTGTATACTGAACATAAATATACTTAATACTTACCTGAGCGTAGCTCGGTCATGACACTATACATATAATCTCAAGGTTAGATAATGAAAGAGAATTAAAAAAATAGATAGAGAGAGAGAGAGAGAGAGCTTAACCACAGTTAAACTAAAGTATTAAATGGACACTAATAATTAAATAGTAACTATAGATGGAATATTAACATTAAAATGAAGAGAGAGAGAGAGAGAGAGAGAAGGATGAAGAAATGAACTATGTTTATTGAAATCTGAGGCACCCTCTAAAGTTCATTAGCACCCTAGGTTTAAGTATGAGGCACACAAAGGAAAAGGAAATACAAAAAAAAAAAAAAAAAGAAGAAACTTGTGAAGTGCATAATAGACATATCACATATGTAAACAGAAAATGCATACAAATGATGTCAACCTGAAAGAAATCCAAAACAGAAAAGATAATAATGAAAACAAAACACCTCCAGTGCTGGTGCAAATGTGAAAATCCCAAAAGTTACTGACACTCTTCAAACCCAGTTTGATTGGGAGATGAGAAAATGTTTGACTTTCTTATTGTGAAATTATTTAGCCAAATTACAAGGGAGAAATTGATTTCCATTCCACCAAGGAAGGTAAAATCATGTCACTTATTTGTCAAGGACCCAAGGTTCAATCTTGAACTTACTAAAATCTGTGGGACTGTGTTTTTAGAGCTCCAATTTAAAAGGAAGTAAACTTTGAAGGCCAATCACGATATTCTAACCAAAAACAATAGCAAAAGTGAAAACTACAGTTAAACCATTAAATTAATTTTACCAGCAGTATTTCCTATCTAACTTCAGCCATCATGACTAAGGGAGTTTGTAATTTTGGATCATTACTCTCACTTCAATAAAAGGAGTTTTGTTCTTGTTGATAAAGTACTTGCATGTGGGAATGTGGAATTACATTTATGTGGCAGTGTCATAAAGGTCCTACACAGCCATGTCATTGTCCTCACCTACCTTCAGAACCCAACCCACCAAAACTGTCTCACTCAGCTTCATGTCTGAGGGTAAAAAGAGAGACGTTCCCAAGTCATGTCTAATGTCTTTTTCATTTGGTCAAATCAAACTGATGATTCCTAGTGAGTTCAACAGAATGGGGTTTCGAAACTGATCTCTTGGTCAAGGATATAACGCCTTAACCAGTTGAGATATGTTGTTGTAGGTGACTCCAAGTATATATTTTATTCATTTAATTTTCGCCACTGCTAAAAAGATAGGCTTTCCTTTCTCTCTCTTCCCCTAGCTCTTCCTTTCTTTTTGATGTTATCTTGTTTATTTTGTGGTTTTCTGTTGATTAACCATGTCATCAGAAGTTTTAGGATTCTTGGATTGGATAGTTTCATATTTTGTTTTTATTCTTTTTTGAAGACAGTATGGTTTTATATTGTTGATTTCTGTGAAGGTTGGGTAGCGCTTCTGTTTTGCTTAGTGGAATAGAACACTCAAAGATAGTTTGGAGAAATTTCTCCCTTTGCCTAATAATTTCATGATGAATAATTCAAACATGTTCTTTTTTCAAAATCAATATAGGGTTTTGAAGAGCGACAGTAACTTTTGGGCTTTTTACAACTTTACTGACATTGGAGCTGTTTTAGGGTTTTTTTTAATATTTTTTTAACTATCTTTTGACTTTCTTTTCCATTTGGACTTGTGTTTTAGGTTGACGATAGCTTGTGACCTGTGGTTTCTATGAATGGAACAGGAGGTGAACTATATATCCTGTTCTCTTGTACATGTTCTAATATAATTTTTTATTTGGAAATTGCTACTCTTAACTTTTTGTTGAACTTCTATAACAATTGAATTGTGTCATGAATTTGTAGATGAAAGACTTAAATCCTGTTAAATAGCATCCCGTAGAATCCTAAAAATGATGTTGAATGGCTTGCAAAGATATGTAGACCGTGAACAAGTTTGGCCGGCTTGTTCTAGGAAAGTTCTTCCTTTGTTTTTATGCAGGTTTTTCTATCAACTTTTTTTATTAGTATGGCTTGCTTTTGAGCCCGTACTTTTCACATAATAAATCCGATGAAATATGCTTTAAAAGTGAAGTATGAACTGAAAGGAATTGCACATATCAGTCAAGTTATAATCAAATATTTGTGATTTATTCCAGTGAGAAAGCATATGACTGAATGTGCAATTCCTTTCAATTCATACTTATTTTTTCATATTTAATTCATTTTAGTTTAGTTTTTTTTTTGTCAGGACTAAAATATATTCATCATGTGTTGTACATTATACTTTTTTCTAAACTATTGCACTTTTTAGTTACAGTTCATTGTTAATTTATATGGGAAGTATCTAATTCATTTTAAAACAATTAAATTAAAGCTTCAAAGATCAGAATGTGAATTTAATATATTCTTTTACTGTAAGAGTACTTTTTTAATTAAGAAACAAATGTGTATATTCTCGTAGAGGACAAAAGAAAACAACCCTAGAAGACTCCCCCCACCCATCCCCCAACAAAAAGAAAGTGAAGAAGAGTCTTTCAATTTTTAAAAACTATCAAAAGACTACAATCACAAAAGAATTTGGTGTGATTTGTGCACCACCAAGAAGCTGTATGTTGGACAACATGCGAAACAGATTCAAAAGAGTTTATCTTAAAAAATTCTGTTGTTCCTTTCTTTCTAGAGGCACCACAAAAGTGATCGTGTAGCACATCTTCATATAACTTTCCCATTACCAGCAAAGGCAAAACCATCAAGCATCCAGTGATCAACTATGTTTGGAAGATAGCACTTCAAACCAAAGGTGTTAAACAAGAGAACCACCCCTTAGTGGAAAACTCACAGTGCAGGAATAAGTGATCGAATGATTCCTCATCTTTCAAGCAAAGACAGTAAAAAGAGGGGATAGAAGTACTGTAAGAGTACTTCTGTTAAACACAATTTTTAAAACTAAACAATTGAAAACCATAAACATACAAATATATATTTACAAAAGCTTCCTTTTTCATTTAATTGAAAAGTGTTGGAGTTTCATTCTTAAAGTATACTGCTAGACCCCGGGGTTTTGGAAATGCATGCTTCCCAGAATAGCAAAGTGATATGGGCCTCACTTTAAGCAAGGTGCCACCCTTACTAGAGGGTATGCCTAAGTGTAAATGTGCGTACTTGAGTGCACTTTAGGGCTTTTTTTTTTTTCCGTCTTTCATCTTTTGATGAAGAATCTTTTAGAAATTATTAGGAAATTTCTTTTTCATCCCCAATTTCTGGACAAAATAAAATAAAATAAACTATATTTGTAAAATGTATACAATTTTACTATTCATTATATGTTGTTTTTGTTGTTTTTATTATTATTAAAGCTGTGTTTTTCTATTATGTACCTCAAGTAAAAAAAGCCCTCAATTGTCTTTGCACCTTCTGCTTAAGCTCTAGAGCAGTAGTTTGCTTTGATAAAACAATGAATTTTGGGGTGTAAAATTAATGAACTTTTCCATCTTTAGTCAAGAATTTTTAGAGTGGTAGCTCTATAGAAATAGAGAAGGTGCGGGAGGTTGTGAAATTTAATGGGTCTCTTTATGTGTCGATCTTTTGTAATTATCATATTGGTATGATTCTTTTAGATTGGAGTCTTTTCTTGTAGGAAGTTGAAGACTCCTCTTGTGGGCTTGTTTTTTATATGTAAGGATATTATTTCATTTCTCTTAACGAAGCAAATAGGCCTGAAAACTCCTTCCCTAATTAAGTTAGCCTTAGAGGCATAAAATGGAGAACTGTAAAGGTACGACAAAATCCTTGTAATAAGACATATACCATAGTTTGAAGTTTGGTTTTGACAGGTGTTGAATCTTTCCTTCCATCTCCAAGACATTAACAAAAGAATTCATTTCGCAGCGCCTCTCATTTCCTTCATGTCCTCTATTTCTACTGTCTTTGAGGTTTTATTGACCACTTCCATCCTATAATAGTTCCTCCTGGGGAAGCAAGAGTATCTTGGTTGGATTTGCATCTAGAACCTGAGATTTTCGGCACATGGAGTTTATTTGAAGTCCCTTGATTTATTTCATGTAGATGTAGCTACCCTTCTCATCCTTGATTTTTAGCTCTAATGGTTTCCCAATTTCCTGATCGTTAGGTTGCATCTTTGATTTGATTGTTGTTTCTGTCTTAGATTTTGATAGGCCTTGTATTACGAAAGTGTATGTCAGGAAGCGTGCGAAGAGAGGGGGTGTGCGTGTGTGAGGAAATTGTAGTTGTGAGGTGGGCCCAAGAGAATATTGTTAGTTAGAAGGGCCAGGGGTGGGCAGTATGCAATGGGTGAGGAGGGAAGGAGTGATATCTTTTTGGCCGATTTTGTAAGCATTCTCTTATCTAAGAAGTTTTGGAGAGGTAGGGAGCTCTGAACTCTCCCTTGGTTGTTAAAAAATAAATGGCTGAGACCTATTAATTTTGGGACCAGAGTGGTAAATCTGAGGCATGGTGGGAAAGATGGAAAGCAAAGTCATGACATTGGAGGAGAATATGTTGGAAGTTGGTGAGAAGCAGATGGTGTTGCAAACCACAATGGATTCAGGATTCAATGAGTCGACTAGAAAGATTGATGAATTAGCAAGGGAAATGCAGCCAGTCATGGTGCAGATCAATCTGATCTTGTCGTGATTGAATGTCATGATGACAGAAAAAGGATCGACATTGATAGAACGAACGGTGATGGATAAAGGGCAGGAGGTTGCTGAGACGTCAATGAAAGAATGGACGAAAGAGGAAGAACAGAGAGAAGGAATTCACTCCTTGGGAGTAAGGTGGTTCCTTTGTTCGACATGAGATTGCGCAGGTTCGAAGTTCCAATATTCAAGGGAGTGGATAACAAAAACCCAGTCGGATGGTTACATCAGGTTGAGAGATAGTTCATAGTTAATCGTTTGTCTGAGAAGGATAAATTGGATGCGGTCGTGTTATGTTTAGAAGGGGAGGCATTAGATTGGTATCAGTGGGAAGAAGATGGGAAATCTGATGTAGCCTAAGTAACCTCAAGGAGAAATCCTCCAAGAACCAAGGTTGTGGATCTTTTATTAGAATGGATAATATGTTTTATACAAGAGAAGTTTCTATTTATAGAGTTCTATTGCAATTGGGGGGTAAAAAGGGAATTAGCCTAGAATATTACCTAATTACCCAATTAATCCTTAGTCTTCTTACATCATTCTACCCCTCCAAAAAGAAAACTTGTCCCGAGTTTTTGAAAGAAGAAACTTATGAAGCAAAATAAAAGGAAAAAAGAATGAAATAAACTTTTCAATGGAGTATGACCAAACCAACCTCCTACGTTTTAAAAAAAAAAAATTATAATCTAAGGGATAAAATCGAGACAAAAAATCAAATATGGCCACTAAAAGATGAATCTCTCCATCGGCCATGAACTCAAAAAAGATGTTTCCTTCATTCTCACTCATAACCGTAGTCAAAGAATCAATTTCAAAAGAATTAGCTTTCGAAGAAAATCCTTCAAGAATCACATTTTCTTTATCATTTGCTTCAAGCTCTTGGACGGTTTGAAGATTCATTTCCACTGCAACCAATGTGTCGTTCTTGTTCATTGGATTTTTCTTTACTTGTGACCATTTCCAAATCAACATTTTCAAATTCTTGTTCTTTTAACTTTATCTTCAAGATTTTCTATTTGAAAATTTTCCAACCGTGATTCCTTTGTTTTTTCTTTTGTATATGAAACCAGTCCGTTCTTAGACTCTTGCAGATGAATTGATAGTTGATTGATATGTTAGTCATTTCTCCCAATGAACATTGAACTTCTTTTGTTGCTTTCTTTATTTCCTCCAATGCTATGGGATCTAAGTTGTCATTTTGTTGGATTCTTGAACGTGTTTCAATCTCATAGCGGGTATAAGACCCATCCATTGATTTTCTTGAATCAATCTTTCTTGAGCGTGTTTCATAACCAAAAGAGTAATTTTGAGTCTTGAACGCTCTTCTTGGATGGTAAAAATCCATTCTTGACGATTCTTTAATTCATCCAGCTTCCAATTTTTACGTTGATTTTTTAAAAAATGGGTTTGATTGGATCGTTAAGCCATTTTTCGATATTGTCGCCTTCTTATTCCGTCCCAAACTGCCTTAGAAATATCATTGGAGTCACTAAAATCGCTAGAATCAATTTTCCAATTTGGATAATGATAGGTTCTTTGAGGAAATTGAGCATGGCCAAAATTGGAATGTATTCTTCTTCCGAATCACGTGAATCAAAACTCCAGCATTGTTTATGGGAGTAAAATTGATTTTCTTGTCTATACCTACTGCTGGTTATTTTTCTTGGTCATCTTTGATCGATAGAAGTCCATTCTTGAAAAATCTTTGGTGTCTTCTTTCTTTCTTGGAATTTTAAGGGTTCCCCCTAATTAGATGTGTTGTTTGGGAACAAGCACAACACTCAAAGCTCCCTCTTGTGATCAGCGTCAACAAGAGTTTACCGGTTTTCCACCGGCAGCGGTCAATGTTAGCTCAGACGGTTGCTCTAATACCAAATTGATGTAGCCTAAGTAACCTCAAAGAGAAATCCTCCAAGAACCAACGTTGTGATTTTTTATTAGAATGAATAATATGTTTTATACAAGAGGAGAAATCTCCTATTTATAGAGTTCTTTACAATTGGGGTAAAAAGGGAATTGACCTAGAATATTATCTAATTACCCAATTAACCCCTGGTCTTACATCAAAATCAATAGGTAACTAGAGCCAGTTTCGGGAGCTTTACTTGAAGAGATTTCAGCCGGCAAATGAGGCAGATTCTTATGCGAGATTGATGCGACTGAAACAAAAGAAAACGGTGAGGGGGTTCTGCTGCCAGTTTGAACAATAGTCTCTTGGGCCCACCTCACAACTACATTTTCCCCATACACGCTCACCTCTCTTCGTATGCTTCCTTACATACACTTTAGTAATACAGAGCCTATCATTAGTCAATAGCCTATTATCATCAGTCAATCAGATTGTTAGAACAATCTTTTGATTACTGAGAAAATTCAGATTAAGTCAAGCATAAAAGAACTAAGCAAGAGATATGCATCTTCTAATCTATTATTTTGTCTGTTAAATAATAGCCAAGCAATAGATGAAGATTAGTATTCACTATTTTATATTTAAACATGTATGTCTTCGTGCATCTTCATAAATCATAGTCAGATATAGTGTCAGAAAGTTCATAAATCCAAAGTTGAATATTATGGGGAGATGGGTAACTGATGGTAAAATTAGGCGCACCAGTGTTAAATTCTGAAAAGGTAATACTGTTTTCTGTGCATTTTGGGCCACTTTTCTGATTCAGCTGCATAAACGTTTCCATTACTTGTTATTATTAAAATTTCACATGAATTTTTGTGATATTTATATTAAAACCTAACCCTTTGTAAGTATAGAGACTCTTAGTTATGGCTCTCACTTAACAAGAATTTTTGTAATTATGGTTTTGTTCAAGTTTATGCGGATTGGGAGTTCATTTTGTAATCCTCTAGGATTTGTGAGGATTGTTCATCTCCATTTTGGTCTTATTTTGATTTGAATATAAATATATAATATTCTCTTTTTCTTATATATATATATATAAAATAAAGGTATTAGAGATCTGCCTCCTCTGTAGGCTTGAAATATTCTGTTCCTTTGGCTGCAGGCGGAAGGAATTAATCAGTACTTTTGAACAAGCAACGATTTGCTGAGACTGAAGAGGATGAGTCAGGCTGACCAAGGAATCAGCGCTGATAATTTAGTTGATGTTCCCTTGAAGCGAAAACGTGGTCGGCCCAGAAAATATCCGAAGTTAAATTACGATGAGAACATTCTTATTGCAAAGAATAGAGGTAAAAAACATTTGGAGGCTATTCCTATTTCTCCTGGTTCTGGAGTAAATGGAAACCAATCACTTCCAACAATTCAAATTCAAAATGTAGCTGATGGGATGCTGGGACAAGTTGTGTCTGGTGTTATTGAAGCAGTATTTGAAGCTGGATATCTTCTGTGTGTTAGGGTTGGCAACTCTGGAATCACTTTGAGGGGTGTTGTCTTTAAACCCGGCCATTATGTCCCTGTTTCAGCAGAGAATGATGTGGCTCCAGATGTTCAAATGATCAGAAGAAACGCAATTCCTCTTGCTACGGGAAATCAAGCGCCTGAAGATACCCCTCAATCCAAAAATGGAGAAATCCCATTGCACGAATCATCAGGTCTCAAACTGGGGTTTAAATATACAACTCCGCATTCCAGCCAGGATGCTTTGAAAGACAATTCTATATCATCTATCTTCGCCCAAATTACCCCTTCGGGAAGCTTAAGAGGTAATGTGGTCCCTGTTGTGCTAGAACCTGCTAAGTTAACTAATGGACCCTCAGTTCCCACTGAAACGTTGACAATTCAAACTGTTGATATTGAATCCGCAAAAGGCAAAGAGGTCCTTGTAGGTACTTCTACCTTGAGCGAATCAGCTCCCACCAGTGTGACAGTTGGGATTGAAAACTTCCAACCCCAAACTACTCAGCAGGTCTTAATAGATGATGTTCAAGTAGAAAATAGTTCTCATAACCAATCCTTGGTAGTGGAAGTGCATGATTCCGAAGGTAAATCAATGGCATTGCCTAGCACGCCTTTCGAGAGTCTTGTGACTGAAGTGATCAAGAGAATTCAAACCCCCTCTCTGACCGCTGAGACGCAGACTGAGGATAACAAACCATCTGTTACAATATCAGCTAAAGAATGCCAAGATGGCTCAGAGGTTGAAGCTAACATAATAGCAGATGGAGCTTTGATGATTGAACCCCTAAAAGCAGTACAACCCCTTCATGAAAGTTCAGAGCCTATTCCCAAAGCTCTGGATGATGAGTCTAAAACTGGCAAAATAACTGAGCTGCTACAGGTACACGAGACACTTCAACTAGAACATATTCTGTATTAATCTTCATGTATTTTGTTACATTACTAAATAATTTTTTTCTGGGAAGAGCTATCTTGCTTGATGCTACTGGCTGCACTAATGAAGTAATGTATACTTTGATAAGGTTTTGCAGGAAAACATGATCCAAACTCCGGAGCCATGGGCCGAAGCACAGAACCCAGGTTTCATGCTGAAGTCAGATGAACCTGAATCAAAAAAAGAGATTGGAGATGAAAATTCTGGTAGCCAAAAGCAAATCTGAGTAGCTTGTATCGCAGTAATATTTTCGCCATCATTGGTAGAGAAGGTATCATATGGTGTATCTGTTTTCTGGGTGCTACCTCACTTCTAATCCTAACTTAGTGTAGTAGGATCATTATCTAGAAAGTTATTAAATTTTTCTAGTTGGATATTTGGATATGGACAATTTCACCTTTGTGAGAGTAAAATAGCTAAGAGCCTTAAGTCTTATATAAAGTTTCCATAGGCAGTTG

mRNA sequence

ATGAGTCAGGCTGACCAAGGAATCAGCGCTGATAATTTAGTTGATGTTCCCTTGAAGCGAAAACGTGGTCGGCCCAGAAAATATCCGAAGTTAAATTACGATGAGAACATTCTTATTGCAAAGAATAGAGGTAAAAAACATTTGGAGGCTATTCCTATTTCTCCTGGTTCTGGAGTAAATGGAAACCAATCACTTCCAACAATTCAAATTCAAAATGTAGCTGATGGGATGCTGGGACAAGTTGTGTCTGGTGTTATTGAAGCAGTATTTGAAGCTGGATATCTTCTGTGTGTTAGGGTTGGCAACTCTGGAATCACTTTGAGGGGTGTTGTCTTTAAACCCGGCCATTATGTCCCTGTTTCAGCAGAGAATGATGTGGCTCCAGATGTTCAAATGATCAGAAGAAACGCAATTCCTCTTGCTACGGGAAATCAAGCGCCTGAAGATACCCCTCAATCCAAAAATGGAGAAATCCCATTGCACGAATCATCAGGTCTCAAACTGGGGTTTAAATATACAACTCCGCATTCCAGCCAGGATGCTTTGAAAGACAATTCTATATCATCTATCTTCGCCCAAATTACCCCTTCGGGAAGCTTAAGAGGTAATGTGGTCCCTGTTGTGCTAGAACCTGCTAAGTTAACTAATGGACCCTCAGTTCCCACTGAAACGTTGACAATTCAAACTGTTGATATTGAATCCGCAAAAGGCAAAGAGGTCCTTGTAGGTACTTCTACCTTGAGCGAATCAGCTCCCACCAGTGTGACAGTTGGGATTGAAAACTTCCAACCCCAAACTACTCAGCAGGTCTTAATAGATGATGTTCAAGTAGAAAATAGTTCTCATAACCAATCCTTGGTAGTGGAAGTGCATGATTCCGAAGGTAAATCAATGGCATTGCCTAGCACGCCTTTCGAGAGTCTTGTGACTGAAGTGATCAAGAGAATTCAAACCCCCTCTCTGACCGCTGAGACGCAGACTGAGGATAACAAACCATCTGTTACAATATCAGCTAAAGAATGCCAAGATGGCTCAGAGGTTGAAGCTAACATAATAGCAGATGGAGCTTTGATGATTGAACCCCTAAAAGCAGTACAACCCCTTCATGAAAGTTCAGAGCCTATTCCCAAAGCTCTGGATGATGAGTCTAAAACTGGCAAAATAACTGAGCTGCTACAGGTTTTGCAGGAAAACATGATCCAAACTCCGGAGCCATGGGCCGAAGCACAGAACCCAGGTTTCATGCTGAAGTCAGATGAACCTGAATCAAAAAAAGAGATTGGAGATGAAAATTCTGGTAGCCAAAAGCAAATCTGA

Coding sequence (CDS)

ATGAGTCAGGCTGACCAAGGAATCAGCGCTGATAATTTAGTTGATGTTCCCTTGAAGCGAAAACGTGGTCGGCCCAGAAAATATCCGAAGTTAAATTACGATGAGAACATTCTTATTGCAAAGAATAGAGGTAAAAAACATTTGGAGGCTATTCCTATTTCTCCTGGTTCTGGAGTAAATGGAAACCAATCACTTCCAACAATTCAAATTCAAAATGTAGCTGATGGGATGCTGGGACAAGTTGTGTCTGGTGTTATTGAAGCAGTATTTGAAGCTGGATATCTTCTGTGTGTTAGGGTTGGCAACTCTGGAATCACTTTGAGGGGTGTTGTCTTTAAACCCGGCCATTATGTCCCTGTTTCAGCAGAGAATGATGTGGCTCCAGATGTTCAAATGATCAGAAGAAACGCAATTCCTCTTGCTACGGGAAATCAAGCGCCTGAAGATACCCCTCAATCCAAAAATGGAGAAATCCCATTGCACGAATCATCAGGTCTCAAACTGGGGTTTAAATATACAACTCCGCATTCCAGCCAGGATGCTTTGAAAGACAATTCTATATCATCTATCTTCGCCCAAATTACCCCTTCGGGAAGCTTAAGAGGTAATGTGGTCCCTGTTGTGCTAGAACCTGCTAAGTTAACTAATGGACCCTCAGTTCCCACTGAAACGTTGACAATTCAAACTGTTGATATTGAATCCGCAAAAGGCAAAGAGGTCCTTGTAGGTACTTCTACCTTGAGCGAATCAGCTCCCACCAGTGTGACAGTTGGGATTGAAAACTTCCAACCCCAAACTACTCAGCAGGTCTTAATAGATGATGTTCAAGTAGAAAATAGTTCTCATAACCAATCCTTGGTAGTGGAAGTGCATGATTCCGAAGGTAAATCAATGGCATTGCCTAGCACGCCTTTCGAGAGTCTTGTGACTGAAGTGATCAAGAGAATTCAAACCCCCTCTCTGACCGCTGAGACGCAGACTGAGGATAACAAACCATCTGTTACAATATCAGCTAAAGAATGCCAAGATGGCTCAGAGGTTGAAGCTAACATAATAGCAGATGGAGCTTTGATGATTGAACCCCTAAAAGCAGTACAACCCCTTCATGAAAGTTCAGAGCCTATTCCCAAAGCTCTGGATGATGAGTCTAAAACTGGCAAAATAACTGAGCTGCTACAGGTTTTGCAGGAAAACATGATCCAAACTCCGGAGCCATGGGCCGAAGCACAGAACCCAGGTTTCATGCTGAAGTCAGATGAACCTGAATCAAAAAAAGAGATTGGAGATGAAAATTCTGGTAGCCAAAAGCAAATCTGA

Protein sequence

MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVNGNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPVSAENDVAPDVQMIRRNAIPLATGNQAPEDTPQSKNGEIPLHESSGLKLGFKYTTPHSSQDALKDNSISSIFAQITPSGSLRGNVVPVVLEPAKLTNGPSVPTETLTIQTVDIESAKGKEVLVGTSTLSESAPTSVTVGIENFQPQTTQQVLIDDVQVENSSHNQSLVVEVHDSEGKSMALPSTPFESLVTEVIKRIQTPSLTAETQTEDNKPSVTISAKECQDGSEVEANIIADGALMIEPLKAVQPLHESSEPIPKALDDESKTGKITELLQVLQENMIQTPEPWAEAQNPGFMLKSDEPESKKEIGDENSGSQKQI

Homology

[Close]

BLAST of CsaV3_3G005180 vs. NCBI nr
Match: XP_011650529.1 (PREDICTED: uncharacterized protein LOC101213958 isoform X1 [Cucumis sativus] >XP_011650530.1 PREDICTED: uncharacterized protein LOC101213958 isoform X1 [Cucumis sativus] >XP_004152926.2 PREDICTED: uncharacterized protein LOC101213958 isoform X1 [Cucumis sativus])

HSP 1 Score: 839.7 bits (2168), Expect = 4.4e-240
Identity = 438/438 (100.00%), Postives = 438/438 (100.00%), Query Frame = 0


Query: 1   MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVN 60
           MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVN
Sbjct: 1   MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVN 60

Query: 61  GNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120
           GNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV
Sbjct: 61  GNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120

Query: 121 SAENDVAPDVQMIRRNAIPLATGNQAPEDTPQSKNGEIPLHESSGLKLGFKYTTPHSSQD 180
           SAENDVAPDVQMIRRNAIPLATGNQAPEDTPQSKNGEIPLHESSGLKLGFKYTTPHSSQD
Sbjct: 121 SAENDVAPDVQMIRRNAIPLATGNQAPEDTPQSKNGEIPLHESSGLKLGFKYTTPHSSQD 180

Query: 181 ALKDNSISSIFAQITPSGSLRGNVVPVVLEPAKLTNGPSVPTETLTIQTVDIESAKGKEV 240
           ALKDNSISSIFAQITPSGSLRGNVVPVVLEPAKLTNGPSVPTETLTIQTVDIESAKGKEV
Sbjct: 181 ALKDNSISSIFAQITPSGSLRGNVVPVVLEPAKLTNGPSVPTETLTIQTVDIESAKGKEV 240

Query: 241 LVGTSTLSESAPTSVTVGIENFQPQTTQQVLIDDVQVENSSHNQSLVVEVHDSEGKSMAL 300
           LVGTSTLSESAPTSVTVGIENFQPQTTQQVLIDDVQVENSSHNQSLVVEVHDSEGKSMAL
Sbjct: 241 LVGTSTLSESAPTSVTVGIENFQPQTTQQVLIDDVQVENSSHNQSLVVEVHDSEGKSMAL 300

Query: 301 PSTPFESLVTEVIKRIQTPSLTAETQTEDNKPSVTISAKECQDGSEVEANIIADGALMIE 360
           PSTPFESLVTEVIKRIQTPSLTAETQTEDNKPSVTISAKECQDGSEVEANIIADGALMIE
Sbjct: 301 PSTPFESLVTEVIKRIQTPSLTAETQTEDNKPSVTISAKECQDGSEVEANIIADGALMIE 360

Query: 361 PLKAVQPLHESSEPIPKALDDESKTGKITELLQVLQENMIQTPEPWAEAQNPGFMLKSDE 420
           PLKAVQPLHESSEPIPKALDDESKTGKITELLQVLQENMIQTPEPWAEAQNPGFMLKSDE
Sbjct: 361 PLKAVQPLHESSEPIPKALDDESKTGKITELLQVLQENMIQTPEPWAEAQNPGFMLKSDE 420

Query: 421 PESKKEIGDENSGSQKQI 439
           PESKKEIGDENSGSQKQI
Sbjct: 421 PESKKEIGDENSGSQKQI 438

[Close]

BLAST of CsaV3_3G005180 vs. NCBI nr
Match: XP_011650531.1 (PREDICTED: uncharacterized protein LOC101213958 isoform X2 [Cucumis sativus] >KGN56133.1 hypothetical protein Csa_3G077670 [Cucumis sativus])

HSP 1 Score: 829.3 bits (2141), Expect = 6.0e-237
Identity = 435/438 (99.32%), Postives = 435/438 (99.32%), Query Frame = 0


Query: 1   MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVN 60
           MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVN
Sbjct: 1   MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVN 60

Query: 61  GNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120
           GNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV
Sbjct: 61  GNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120

Query: 121 SAENDVAPDVQMIRRNAIPLATGNQAPEDTPQSKNGEIPLHESSGLKLGFKYTTPHSSQD 180
           SAENDVAPDVQMIRRNAIPLATGNQAPEDTPQSKNGEIPLHESSGLKLGFKYTTPHSSQD
Sbjct: 121 SAENDVAPDVQMIRRNAIPLATGNQAPEDTPQSKNGEIPLHESSGLKLGFKYTTPHSSQD 180

Query: 181 ALKDNSISSIFAQITPSGSLRGNVVPVVLEPAKLTNGPSVPTETLTIQTVDIESAKGKEV 240
           ALKDNSISSIFAQITPSGSLRGNVVPVVLEPAKLTNGPSVPTETLTIQTVDIESAKGKEV
Sbjct: 181 ALKDNSISSIFAQITPSGSLRGNVVPVVLEPAKLTNGPSVPTETLTIQTVDIESAKGKEV 240

Query: 241 LVGTSTLSESAPTSVTVGIENFQPQTTQQVLIDDVQVENSSHNQSLVVEVHDSEGKSMAL 300
           LVGTSTLSESAPTSVTVGIENFQPQTTQQVLIDDVQVENSSHNQSLVVEVHDSEGKSMAL
Sbjct: 241 LVGTSTLSESAPTSVTVGIENFQPQTTQQVLIDDVQVENSSHNQSLVVEVHDSEGKSMAL 300

Query: 301 PSTPFESLVTEVIKRIQTPSLTAETQTEDNKPSVTISAKECQDGSEVEANIIADGALMIE 360
           PSTPFESLVTEVIKRIQTPSLTAETQTEDNKPSVTISAKECQDGSEVEANIIADGALMIE
Sbjct: 301 PSTPFESLVTEVIKRIQTPSLTAETQTEDNKPSVTISAKECQDGSEVEANIIADGALMIE 360

Query: 361 PLKAVQPLHESSEPIPKALDDESKTGKITELLQVLQENMIQTPEPWAEAQNPGFMLKSDE 420
           PLKAVQPLHESSEPIPKALDDESKTGKITEL   LQENMIQTPEPWAEAQNPGFMLKSDE
Sbjct: 361 PLKAVQPLHESSEPIPKALDDESKTGKITEL---LQENMIQTPEPWAEAQNPGFMLKSDE 420

Query: 421 PESKKEIGDENSGSQKQI 439
           PESKKEIGDENSGSQKQI
Sbjct: 421 PESKKEIGDENSGSQKQI 435

[Close]

BLAST of CsaV3_3G005180 vs. NCBI nr
Match: XP_008463423.1 (PREDICTED: uncharacterized protein LOC103501592 isoform X1 [Cucumis melo] >XP_008463424.1 PREDICTED: uncharacterized protein LOC103501592 isoform X1 [Cucumis melo] >XP_008463425.1 PREDICTED: uncharacterized protein LOC103501592 isoform X1 [Cucumis melo] >XP_008463426.1 PREDICTED: uncharacterized protein LOC103501592 isoform X1 [Cucumis melo] >XP_008463427.1 PREDICTED: uncharacterized protein LOC103501592 isoform X1 [Cucumis melo])

HSP 1 Score: 799.7 bits (2064), Expect = 5.1e-228
Identity = 418/438 (95.43%), Postives = 426/438 (97.26%), Query Frame = 0


Query: 1   MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVN 60
           MSQADQGIS+DNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVN
Sbjct: 1   MSQADQGISSDNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVN 60

Query: 61  GNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120
           GNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV
Sbjct: 61  GNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120

Query: 121 SAENDVAPDVQMIRRNAIPLATGNQAPEDTPQSKNGEIPLHESSGLKLGFKYTTPHSSQD 180
           SAENDVAP+VQMIRRNAIPLATGNQAPED PQSKNGEIP HESSGLKLGFKY+ PHSS+D
Sbjct: 121 SAENDVAPNVQMIRRNAIPLATGNQAPEDNPQSKNGEIPSHESSGLKLGFKYSPPHSSRD 180

Query: 181 ALKDNSISSIFAQITPSGSLRGNVVPVVLEPAKLTNGPSVPTETLTIQTVDIESAKGKEV 240
           ALKDNSISSIFAQITPSGS RGNVVPVVL+ AKLTNGPSVPTETLTIQTVDIESAKGKEV
Sbjct: 181 ALKDNSISSIFAQITPSGSSRGNVVPVVLQAAKLTNGPSVPTETLTIQTVDIESAKGKEV 240

Query: 241 LVGTSTLSESAPTSVTVGIENFQPQTTQQVLIDDVQVENSSHNQSLVVEVHDSEGKSMAL 300
           LVGTS LSESAPTSVTVGIENFQPQTTQQVLI+DVQVENSSHNQSLVVEVHDSEGK MAL
Sbjct: 241 LVGTSALSESAPTSVTVGIENFQPQTTQQVLINDVQVENSSHNQSLVVEVHDSEGKLMAL 300

Query: 301 PSTPFESLVTEVIKRIQTPSLTAETQTEDNKPSVTISAKECQDGSEVEANIIADGALMIE 360
           PSTPFESLVTEVIKRIQTPSLTAETQ+EDNKPSVTISAKECQDG EVEANI ADGALMIE
Sbjct: 301 PSTPFESLVTEVIKRIQTPSLTAETQSEDNKPSVTISAKECQDGLEVEANIAADGALMIE 360

Query: 361 PLKAVQPLHESSEPIPKALDDESKTGKITELLQVLQENMIQTPEPWAEAQNPGFMLKSDE 420
           PLKAVQPL+ESSEPIPKALDDESKTGKITELLQVLQENMIQTPEPW EAQNPG MLKSDE
Sbjct: 361 PLKAVQPLNESSEPIPKALDDESKTGKITELLQVLQENMIQTPEPWGEAQNPGLMLKSDE 420

Query: 421 PESKKEIGDENSGSQKQI 439
           PESKKEIGDE SGSQKQI
Sbjct: 421 PESKKEIGDEKSGSQKQI 438

[Close]

BLAST of CsaV3_3G005180 vs. NCBI nr
Match: XP_008463428.1 (PREDICTED: uncharacterized protein LOC103501592 isoform X2 [Cucumis melo])

HSP 1 Score: 789.3 bits (2037), Expect = 6.9e-225
Identity = 415/438 (94.75%), Postives = 423/438 (96.58%), Query Frame = 0


Query: 1   MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVN 60
           MSQADQGIS+DNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVN
Sbjct: 1   MSQADQGISSDNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVN 60

Query: 61  GNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120
           GNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV
Sbjct: 61  GNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120

Query: 121 SAENDVAPDVQMIRRNAIPLATGNQAPEDTPQSKNGEIPLHESSGLKLGFKYTTPHSSQD 180
           SAENDVAP+VQMIRRNAIPLATGNQAPED PQSKNGEIP HESSGLKLGFKY+ PHSS+D
Sbjct: 121 SAENDVAPNVQMIRRNAIPLATGNQAPEDNPQSKNGEIPSHESSGLKLGFKYSPPHSSRD 180

Query: 181 ALKDNSISSIFAQITPSGSLRGNVVPVVLEPAKLTNGPSVPTETLTIQTVDIESAKGKEV 240
           ALKDNSISSIFAQITPSGS RGNVVPVVL+ AKLTNGPSVPTETLTIQTVDIESAKGKEV
Sbjct: 181 ALKDNSISSIFAQITPSGSSRGNVVPVVLQAAKLTNGPSVPTETLTIQTVDIESAKGKEV 240

Query: 241 LVGTSTLSESAPTSVTVGIENFQPQTTQQVLIDDVQVENSSHNQSLVVEVHDSEGKSMAL 300
           LVGTS LSESAPTSVTVGIENFQPQTTQQVLI+DVQVENSSHNQSLVVEVHDSEGK MAL
Sbjct: 241 LVGTSALSESAPTSVTVGIENFQPQTTQQVLINDVQVENSSHNQSLVVEVHDSEGKLMAL 300

Query: 301 PSTPFESLVTEVIKRIQTPSLTAETQTEDNKPSVTISAKECQDGSEVEANIIADGALMIE 360
           PSTPFESLVTEVIKRIQTPSLTAETQ+EDNKPSVTISAKECQDG EVEANI ADGALMIE
Sbjct: 301 PSTPFESLVTEVIKRIQTPSLTAETQSEDNKPSVTISAKECQDGLEVEANIAADGALMIE 360

Query: 361 PLKAVQPLHESSEPIPKALDDESKTGKITELLQVLQENMIQTPEPWAEAQNPGFMLKSDE 420
           PLKAVQPL+ESSEPIPKALDDESKTGKITEL   LQENMIQTPEPW EAQNPG MLKSDE
Sbjct: 361 PLKAVQPLNESSEPIPKALDDESKTGKITEL---LQENMIQTPEPWGEAQNPGLMLKSDE 420

Query: 421 PESKKEIGDENSGSQKQI 439
           PESKKEIGDE SGSQKQI
Sbjct: 421 PESKKEIGDEKSGSQKQI 435

[Close]

BLAST of CsaV3_3G005180 vs. NCBI nr
Match: XP_023520437.1 (uncharacterized protein LOC111783826 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023520438.1 uncharacterized protein LOC111783826 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023520439.1 uncharacterized protein LOC111783826 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023520440.1 uncharacterized protein LOC111783826 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 678.7 bits (1750), Expect = 1.3e-191
Identity = 351/442 (79.41%), Postives = 396/442 (89.59%), Query Frame = 0


Query: 1   MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVN 60
           MSQADQGISADNL D PLKRKRGRPRKYPKL+YDENILI+KNRGKKHLEA+PISPGSGVN
Sbjct: 1   MSQADQGISADNLADAPLKRKRGRPRKYPKLSYDENILISKNRGKKHLEAMPISPGSGVN 60

Query: 61  GNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120
           GNQS P IQIQN++DGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV
Sbjct: 61  GNQSQPAIQIQNISDGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120

Query: 121 SAENDVAPDVQMIRRNAIPLATGNQAPEDTPQSKNGEIPLHESSGLKLGFKYTTPHSSQD 180
           SAENDVAPD+QMIRRN +P ATGNQ+P + P S NGE+P HESSG  LGFKY+ PHS+ D
Sbjct: 121 SAENDVAPDIQMIRRNMVPFATGNQSPGNNPLSNNGEVPSHESSGATLGFKYSPPHSNWD 180

Query: 181 ALKDNSISSIFAQITPSGSLRGNVVPVVLEPAKLTNGPSVPTETLTIQTVDIESAKGKEV 240
           A K+ S+SSI AQITPSGS RGNVVPVV  PAKLTNGP  P+ET T+QT DIES+KGKEV
Sbjct: 181 APKEKSVSSILAQITPSGSSRGNVVPVVQLPAKLTNGPLGPSETFTLQTADIESSKGKEV 240

Query: 241 LVGTSTLSESAPTSVTVGIE--NFQPQTTQQVLIDDVQVENSSHNQSLVVEVHDSEGKSM 300
           L+G+ T +ESAP  VTVGIE  +FQPQT+QQV++ DV VEN+SHN+SLV+EVHDSEGKSM
Sbjct: 241 LIGSFTSNESAPNDVTVGIESFSFQPQTSQQVVLQDVSVENTSHNESLVMEVHDSEGKSM 300

Query: 301 ALPSTPFESLVTEVIKRIQTPSLTAETQTEDNKPSVTISAKECQDGSEVEANIIADGALM 360
           ALPSTPFESLVTEVIKRIQ P+L+AE QTE+NKP+VTISAKE +  SEVEAN++ADGALM
Sbjct: 301 ALPSTPFESLVTEVIKRIQAPTLSAEMQTENNKPTVTISAKEFEVSSEVEANLLADGALM 360

Query: 361 IEPLKAVQPLHESSEPIPKALDDESKTGKITELLQVLQENMIQTPEPWAEAQNPGFMLKS 420
           IEPLKAVQPLHESSE IPKALDDES+TGK+TELLQVLQENM+QTP+PW +  +PG MLKS
Sbjct: 361 IEPLKAVQPLHESSEHIPKALDDESRTGKMTELLQVLQENMMQTPDPWGDVHDPGLMLKS 420

Query: 421 DEP-ESKKEIGD-ENSGSQKQI 439
           +EP ES++EIGD E +GSQKQ+
Sbjct: 421 EEPGESRREIGDEEEAGSQKQM 442

[Close]

BLAST of CsaV3_3G005180 vs. TAIR10
Match: AT5G54930.1 (AT hook motif-containing protein)

HSP 1 Score: 106.7 bits (265), Expect = 3.7e-23
Identity = 62/123 (50.41%), Postives = 77/123 (62.60%), Query Frame = 0


Query: 15  DVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVNGNQSLPTIQIQNVA 74
           D+  KRKRGRPRK  KL  +E+ L                 G   + ++S    + +N  
Sbjct: 16  DLTAKRKRGRPRKQLKLESNEHSL-----------------GHSPSFSRSQQQSRQRNDD 75

Query: 75  DGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPVSAENDVAPDVQMIR 134
           + M+GQ +SGVIEA FEAG+LL V+VGNS   LRGVVFKPGH  PVS +NDVAPDV MIR
Sbjct: 76  EAMVGQPISGVIEATFEAGFLLSVKVGNSDSMLRGVVFKPGHCDPVSVDNDVAPDVPMIR 121

Query: 135 RNA 138
           RN+
Sbjct: 136 RNS 121

[Close]

BLAST of CsaV3_3G005180 vs. TAIR10
Match: AT4G21895.1 (DNA binding)

HSP 1 Score: 67.8 bits (164), Expect = 1.9e-11
Identity = 44/113 (38.94%), Postives = 63/113 (55.75%), Query Frame = 0


Query: 77  MLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPVSAENDVAPDVQMIRRN 136
           ++G+VV+GVIE  F+AGYLL V+V +S   LRG+VF  G   P++ ENDVAP V+M  R 
Sbjct: 34  LVGKVVTGVIEGSFDAGYLLNVKVKDSDTQLRGLVFIRGRVTPITPENDVAPLVKMYGRE 93

Query: 137 AIP-LATGNQAPEDTPQS----KNGEIPLHESSGLKLGFKYTTPHSSQDALKD 185
            I    T +  P D P         ++ + ESS   +     T   +++A KD
Sbjct: 94  DIKNNQTDHSFPTDQPMQDAAVTTTDMDISESSRALVVVPQATNGQAKEATKD 146

[Close]

BLAST of CsaV3_3G005180 vs. TAIR10
Match: AT5G52890.2 (AT hook motif-containing protein)

HSP 1 Score: 58.2 bits (139), Expect = 1.5e-08
Identity = 93/390 (23.85%), Postives = 152/390 (38.97%), Query Frame = 0


Query: 1   MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVN 60
           M Q +QG S+     +  KRKRGRPR+      DE+               P++P     
Sbjct: 9   MDQLNQGSSS----SLTNKRKRGRPRR------DES-----------QTQQPVNP----- 68

Query: 61  GNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120
                       V + ++G+VVSGV+E  FEAGY L V+V ++   L+GVVF P    P+
Sbjct: 69  -----------PVDENLIGRVVSGVVEGSFEAGYFLNVKVADTEKQLKGVVFLPQKVTPL 128

Query: 121 SAENDVAPDVQMIRRNAIPLAT-------------GNQAPEDTPQSKNGEIPLHESSGLK 180
           +   D+ P  +M  RN IP+ +             GNQ  +   + +   +   ++    
Sbjct: 129 TPATDLFPQAKMYARNDIPIPSSYQQTPLQEKKNAGNQTDDIGSEPQTDALIADKNQSAT 188

Query: 181 LGFKYTTPHSSQDA--------LKDNSISSIFAQITPSGSLRGNVVPVVLEPAKLT---- 240
                   H  +DA         +++ I ++   +  S S  G V+    EPA  T    
Sbjct: 189 CTTSLPDDHPMRDAGVGSVAMGERNDPIDTLMKDVAGS-SAEGKVI----EPAGQTLSLM 248

Query: 241 ---NGPSVPTE-----------------TLTIQTVDIESAKGKEVLVGTSTLSESAPT-- 300
                  VP E                 T+TI +     AKG   LV   +  E++ T  
Sbjct: 249 PQFGSDGVPKEDHTVLRSEACAASKTAVTVTITSPKDSIAKGSTTLVDFFSAPETSRTQA 308

Query: 301 ---SVTVGIENFQPQTTQQVLIDDVQVENSSHNQSLVVEVHDSEGKSM-ALPSTPFESLV 340
              S T+ +E FQ QT +    D+                 D+E + M   P++  E + 
Sbjct: 309 TGSSSTLNLELFQNQTKRSGTEDEKTPA-------------DAEPRGMEEKPASTVEDVP 343

[Close]

BLAST of CsaV3_3G005180 vs. TrEMBL
Match: tr|A0A0A0L303|A0A0A0L303_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077670 PE=4 SV=1)

HSP 1 Score: 829.3 bits (2141), Expect = 4.0e-237
Identity = 435/438 (99.32%), Postives = 435/438 (99.32%), Query Frame = 0


Query: 1   MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVN 60
           MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVN
Sbjct: 1   MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVN 60

Query: 61  GNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120
           GNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV
Sbjct: 61  GNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120

Query: 121 SAENDVAPDVQMIRRNAIPLATGNQAPEDTPQSKNGEIPLHESSGLKLGFKYTTPHSSQD 180
           SAENDVAPDVQMIRRNAIPLATGNQAPEDTPQSKNGEIPLHESSGLKLGFKYTTPHSSQD
Sbjct: 121 SAENDVAPDVQMIRRNAIPLATGNQAPEDTPQSKNGEIPLHESSGLKLGFKYTTPHSSQD 180

Query: 181 ALKDNSISSIFAQITPSGSLRGNVVPVVLEPAKLTNGPSVPTETLTIQTVDIESAKGKEV 240
           ALKDNSISSIFAQITPSGSLRGNVVPVVLEPAKLTNGPSVPTETLTIQTVDIESAKGKEV
Sbjct: 181 ALKDNSISSIFAQITPSGSLRGNVVPVVLEPAKLTNGPSVPTETLTIQTVDIESAKGKEV 240

Query: 241 LVGTSTLSESAPTSVTVGIENFQPQTTQQVLIDDVQVENSSHNQSLVVEVHDSEGKSMAL 300
           LVGTSTLSESAPTSVTVGIENFQPQTTQQVLIDDVQVENSSHNQSLVVEVHDSEGKSMAL
Sbjct: 241 LVGTSTLSESAPTSVTVGIENFQPQTTQQVLIDDVQVENSSHNQSLVVEVHDSEGKSMAL 300

Query: 301 PSTPFESLVTEVIKRIQTPSLTAETQTEDNKPSVTISAKECQDGSEVEANIIADGALMIE 360
           PSTPFESLVTEVIKRIQTPSLTAETQTEDNKPSVTISAKECQDGSEVEANIIADGALMIE
Sbjct: 301 PSTPFESLVTEVIKRIQTPSLTAETQTEDNKPSVTISAKECQDGSEVEANIIADGALMIE 360

Query: 361 PLKAVQPLHESSEPIPKALDDESKTGKITELLQVLQENMIQTPEPWAEAQNPGFMLKSDE 420
           PLKAVQPLHESSEPIPKALDDESKTGKITEL   LQENMIQTPEPWAEAQNPGFMLKSDE
Sbjct: 361 PLKAVQPLHESSEPIPKALDDESKTGKITEL---LQENMIQTPEPWAEAQNPGFMLKSDE 420

Query: 421 PESKKEIGDENSGSQKQI 439
           PESKKEIGDENSGSQKQI
Sbjct: 421 PESKKEIGDENSGSQKQI 435

[Close]

BLAST of CsaV3_3G005180 vs. TrEMBL
Match: tr|A0A1S3CJ92|A0A1S3CJ92_CUCME (uncharacterized protein LOC103501592 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501592 PE=4 SV=1)

HSP 1 Score: 799.7 bits (2064), Expect = 3.4e-228
Identity = 418/438 (95.43%), Postives = 426/438 (97.26%), Query Frame = 0


Query: 1   MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVN 60
           MSQADQGIS+DNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVN
Sbjct: 1   MSQADQGISSDNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVN 60

Query: 61  GNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120
           GNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV
Sbjct: 61  GNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120

Query: 121 SAENDVAPDVQMIRRNAIPLATGNQAPEDTPQSKNGEIPLHESSGLKLGFKYTTPHSSQD 180
           SAENDVAP+VQMIRRNAIPLATGNQAPED PQSKNGEIP HESSGLKLGFKY+ PHSS+D
Sbjct: 121 SAENDVAPNVQMIRRNAIPLATGNQAPEDNPQSKNGEIPSHESSGLKLGFKYSPPHSSRD 180

Query: 181 ALKDNSISSIFAQITPSGSLRGNVVPVVLEPAKLTNGPSVPTETLTIQTVDIESAKGKEV 240
           ALKDNSISSIFAQITPSGS RGNVVPVVL+ AKLTNGPSVPTETLTIQTVDIESAKGKEV
Sbjct: 181 ALKDNSISSIFAQITPSGSSRGNVVPVVLQAAKLTNGPSVPTETLTIQTVDIESAKGKEV 240

Query: 241 LVGTSTLSESAPTSVTVGIENFQPQTTQQVLIDDVQVENSSHNQSLVVEVHDSEGKSMAL 300
           LVGTS LSESAPTSVTVGIENFQPQTTQQVLI+DVQVENSSHNQSLVVEVHDSEGK MAL
Sbjct: 241 LVGTSALSESAPTSVTVGIENFQPQTTQQVLINDVQVENSSHNQSLVVEVHDSEGKLMAL 300

Query: 301 PSTPFESLVTEVIKRIQTPSLTAETQTEDNKPSVTISAKECQDGSEVEANIIADGALMIE 360
           PSTPFESLVTEVIKRIQTPSLTAETQ+EDNKPSVTISAKECQDG EVEANI ADGALMIE
Sbjct: 301 PSTPFESLVTEVIKRIQTPSLTAETQSEDNKPSVTISAKECQDGLEVEANIAADGALMIE 360

Query: 361 PLKAVQPLHESSEPIPKALDDESKTGKITELLQVLQENMIQTPEPWAEAQNPGFMLKSDE 420
           PLKAVQPL+ESSEPIPKALDDESKTGKITELLQVLQENMIQTPEPW EAQNPG MLKSDE
Sbjct: 361 PLKAVQPLNESSEPIPKALDDESKTGKITELLQVLQENMIQTPEPWGEAQNPGLMLKSDE 420

Query: 421 PESKKEIGDENSGSQKQI 439
           PESKKEIGDE SGSQKQI
Sbjct: 421 PESKKEIGDEKSGSQKQI 438

[Close]

BLAST of CsaV3_3G005180 vs. TrEMBL
Match: tr|A0A1S3CJ96|A0A1S3CJ96_CUCME (uncharacterized protein LOC103501592 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501592 PE=4 SV=1)

HSP 1 Score: 789.3 bits (2037), Expect = 4.6e-225
Identity = 415/438 (94.75%), Postives = 423/438 (96.58%), Query Frame = 0


Query: 1   MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVN 60
           MSQADQGIS+DNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVN
Sbjct: 1   MSQADQGISSDNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVN 60

Query: 61  GNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120
           GNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV
Sbjct: 61  GNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120

Query: 121 SAENDVAPDVQMIRRNAIPLATGNQAPEDTPQSKNGEIPLHESSGLKLGFKYTTPHSSQD 180
           SAENDVAP+VQMIRRNAIPLATGNQAPED PQSKNGEIP HESSGLKLGFKY+ PHSS+D
Sbjct: 121 SAENDVAPNVQMIRRNAIPLATGNQAPEDNPQSKNGEIPSHESSGLKLGFKYSPPHSSRD 180

Query: 181 ALKDNSISSIFAQITPSGSLRGNVVPVVLEPAKLTNGPSVPTETLTIQTVDIESAKGKEV 240
           ALKDNSISSIFAQITPSGS RGNVVPVVL+ AKLTNGPSVPTETLTIQTVDIESAKGKEV
Sbjct: 181 ALKDNSISSIFAQITPSGSSRGNVVPVVLQAAKLTNGPSVPTETLTIQTVDIESAKGKEV 240

Query: 241 LVGTSTLSESAPTSVTVGIENFQPQTTQQVLIDDVQVENSSHNQSLVVEVHDSEGKSMAL 300
           LVGTS LSESAPTSVTVGIENFQPQTTQQVLI+DVQVENSSHNQSLVVEVHDSEGK MAL
Sbjct: 241 LVGTSALSESAPTSVTVGIENFQPQTTQQVLINDVQVENSSHNQSLVVEVHDSEGKLMAL 300

Query: 301 PSTPFESLVTEVIKRIQTPSLTAETQTEDNKPSVTISAKECQDGSEVEANIIADGALMIE 360
           PSTPFESLVTEVIKRIQTPSLTAETQ+EDNKPSVTISAKECQDG EVEANI ADGALMIE
Sbjct: 301 PSTPFESLVTEVIKRIQTPSLTAETQSEDNKPSVTISAKECQDGLEVEANIAADGALMIE 360

Query: 361 PLKAVQPLHESSEPIPKALDDESKTGKITELLQVLQENMIQTPEPWAEAQNPGFMLKSDE 420
           PLKAVQPL+ESSEPIPKALDDESKTGKITEL   LQENMIQTPEPW EAQNPG MLKSDE
Sbjct: 361 PLKAVQPLNESSEPIPKALDDESKTGKITEL---LQENMIQTPEPWGEAQNPGLMLKSDE 420

Query: 421 PESKKEIGDENSGSQKQI 439
           PESKKEIGDE SGSQKQI
Sbjct: 421 PESKKEIGDEKSGSQKQI 435

[Close]

BLAST of CsaV3_3G005180 vs. TrEMBL
Match: tr|G9BBD9|G9BBD9_ELYEL (Uncharacterized protein ATH-1 OS=Elymus elongatus OX=4588 GN=ATH-1 PE=2 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.3e-115
Identity = 216/244 (88.52%), Postives = 228/244 (93.44%), Query Frame = 0


Query: 1   MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVN 60
           MSQADQGISADNLVDVPLKRKRGRP KYPKL+ DENILIAKNRGKKHLEA PISPGSGVN
Sbjct: 1   MSQADQGISADNLVDVPLKRKRGRPGKYPKLSCDENILIAKNRGKKHLEAFPISPGSGVN 60

Query: 61  GNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120
           G+QS PTIQIQ+VADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV
Sbjct: 61  GDQSHPTIQIQSVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120

Query: 121 SAENDVAPDVQMIRRNAIPLATGNQAPEDTPQSKNGEIPLHESSGLKLGFKYTTPHSSQD 180
           SAENDVAPDVQMI RN +PLAT NQAP + P+SKNGE+P HESSG+KLGFKYT PHS++D
Sbjct: 121 SAENDVAPDVQMIGRNTVPLATENQAPGNNPRSKNGEVPSHESSGVKLGFKYTPPHSNRD 180

Query: 181 ALKDNSISSIFAQITPSGSLRGNVVPVVLEPAKLTNGPSVPTETLTIQTVDIESAKGKEV 240
           ALKDNSISSI AQITPSG  RGNVVPVVL+PAKLTNGPSVPTET TIQT DIES+KGKEV
Sbjct: 181 ALKDNSISSILAQITPSGISRGNVVPVVLQPAKLTNGPSVPTETFTIQTADIESSKGKEV 240

Query: 241 LVGT 245
           LVGT
Sbjct: 241 LVGT 244

[Close]

BLAST of CsaV3_3G005180 vs. TrEMBL
Match: tr|A0A2C9UDY4|A0A2C9UDY4_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G072500 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 1.4e-64
Identity = 187/446 (41.93%), Postives = 253/446 (56.73%), Query Frame = 0


Query: 1   MSQADQGISADNLVDVPLKRKRGRPRKYPK--LNYDENILIAKNRGKKHLEAIPISPG-S 60
           MS+A+QG   D    +P+KRKRGRPRKYP+  L +  ++  + +    H  +  + PG  
Sbjct: 1   MSEANQGNHPDISAIIPMKRKRGRPRKYPRPILGHGRDVHASVDLNPNHGSSSHVPPGFV 60

Query: 61  GVNGNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHY 120
           GVNGNQ     +    +D M+GQ+V GVIEA F+AGYLL VRV NS  TLRGVVFKPG +
Sbjct: 61  GVNGNQPCQVDRANFASDAMVGQIVHGVIEAAFDAGYLLSVRVSNSETTLRGVVFKPGRF 120

Query: 121 VPVSAENDVAPDVQMIRRNAIPLATGNQAPEDTPQSKNGEIPLHESSGLKLGFKYTTPHS 180
           VPVS +NDVAP VQMIRRN IPL   N A   TP+S+       E +G        T H+
Sbjct: 121 VPVSTDNDVAPGVQMIRRNEIPLPQENYAQVHTPRSR-------ERNG--------TVHT 180

Query: 181 SQDAL-KDNSISSIFAQITPSGSLRGNVVPVVLEPAKLTNGPSVPTETLTIQTVDIESAK 240
           +Q    K   + SI +Q TP  S RGNVVPVVL+P  L+NG +    ++  Q  D  ++K
Sbjct: 181 AQPVTSKGKQVPSIASQ-TPVIS-RGNVVPVVLQPVDLSNGNASEPSSIATQPADAVASK 240

Query: 241 GKEVLVGTSTLSESAPTSVTVGIEN----FQPQTTQQVLIDDVQVENSSHNQSLVVEVHD 300
           GK+VL     L+ S PT+    +EN    FQ Q   Q +    Q E    NQ+L     +
Sbjct: 241 GKQVLDAAHPLNGSTPTNQVQAVENQLLHFQSQDKYQSMPSGTQKE-PGVNQNLAQAQQE 300

Query: 301 SEGKSMALPSTPFESLVTEVIKRIQTPSLTAETQTEDNKPSVTISAKECQDGSEVEANII 360
           +E +SM LP  PF  L+TEVIKR Q PS   ++   DN  +V  SAK     +E + +  
Sbjct: 301 AEAQSMKLPGMPFGKLLTEVIKRTQVPS---QSTKSDNGSAVNFSAKVSSLAAEDDVD-D 360

Query: 361 ADGALMIEPLKAVQP-LHESSEPIPKALDDESKTGKITELLQVLQENMIQTPEPWAEAQN 420
            +  L +EPL++VQP LH     + + LD+  +TGK+TELLQVLQENM +      + + 
Sbjct: 361 TNQPLSVEPLQSVQPVLHNHPAVVSRTLDN-YRTGKMTELLQVLQENMTENQTTSMQDET 419

Query: 421 PGFMLKSDEPESKKEIGDENSGSQKQ 438
               L S E     E+GDE++ + K+
Sbjct: 421 NDARLGSLE----TELGDEDTDNSKK 419

The following BLAST results are available for this feature:

BLAST of CsaV3_3G005180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650529.1	4.4e-240	100.00	PREDICTED: uncharacterized protein LOC101213958 isoform X1 [Cucumis sativus] >XP...	[more]
XP_011650531.1	6.0e-237	99.32	PREDICTED: uncharacterized protein LOC101213958 isoform X2 [Cucumis sativus] >KG...	[more]
XP_008463423.1	5.1e-228	95.43	PREDICTED: uncharacterized protein LOC103501592 isoform X1 [Cucumis melo] >XP_00...	[more]
XP_008463428.1	6.9e-225	94.75	PREDICTED: uncharacterized protein LOC103501592 isoform X2 [Cucumis melo]	[more]
XP_023520437.1	1.3e-191	79.41	uncharacterized protein LOC111783826 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]

BLAST of CsaV3_3G005180 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G54930.1	3.7e-23	50.41	AT hook motif-containing protein	[more]
AT4G21895.1	1.9e-11	38.94	DNA binding	[more]
AT5G52890.2	1.5e-08	23.85	AT hook motif-containing protein	[more]

BLAST of CsaV3_3G005180 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G005180 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L303\|A0A0A0L303_CUCSA	4.0e-237	99.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077670 PE=4 SV=1	[more]
tr\|A0A1S3CJ92\|A0A1S3CJ92_CUCME	3.4e-228	95.43	uncharacterized protein LOC103501592 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3CJ96\|A0A1S3CJ96_CUCME	4.6e-225	94.75	uncharacterized protein LOC103501592 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|G9BBD9\|G9BBD9_ELYEL	2.3e-115	88.52	Uncharacterized protein ATH-1 OS=Elymus elongatus OX=4588 GN=ATH-1 PE=2 SV=1	[more]
tr\|A0A2C9UDY4\|A0A2C9UDY4_MANES	1.4e-64	41.93	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G072500 PE=4 SV=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G005180.1	CsaV3_3G005180.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 403..438
None	No IPR available	PANTHER	PTHR34682	FAMILY NOT NAMED	coord: 1..402
None	No IPR available	PANTHER	PTHR34682:SF1	AT HOOK MOTIF-CONTAINING PROTEIN	coord: 1..402

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_3G005180	CSPI03G05170	Wild cucumber (PI 183967)	cpicucB144
CsaV3_3G005180	Cucsa.059900	Cucumber (Gy14) v1	cgycucB046
CsaV3_3G005180	CmaCh16G008630	Cucurbita maxima (Rimu)	cmacucB0382
CsaV3_3G005180	CmaCh04G009460	Cucurbita maxima (Rimu)	cmacucB0834
CsaV3_3G005180	CmoCh04G010170	Cucurbita moschata (Rifu)	cmocucB0819
CsaV3_3G005180	Cp4.1LG01g08230	Cucurbita pepo (Zucchini)	cpecucB0488
CsaV3_3G005180	CsGy3G005240	Cucumber (Gy14) v2	cgybcucB117
CsaV3_3G005180	Carg00059	Silver-seed gourd	carcucB0696
CsaV3_3G005180	Cla005306	Watermelon (97103) v1	cucwmB204
CsaV3_3G005180	MELO3C025384	Melon (DHL92) v3.5.1	cucmeB237
CsaV3_3G005180	ClCG10G005440	Watermelon (Charleston Gray)	cucwcgB194
CsaV3_3G005180	Lsi05G006030	Bottle gourd (USVL1VR-Ls)	cuclsiB217
CsaV3_3G005180	MELO3C025384.2	Melon (DHL92) v3.6.1	cucmedB234
CsaV3_3G005180	Cla97C10G189680	Watermelon (97103) v2	cucwmbB182
CsaV3_3G005180	Bhi11G000487	Wax gourd	cucwgoB223

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_3G005180	Silver-seed gourd	carcucB0698
CsaV3_3G005180	Silver-seed gourd	carcucB0943
CsaV3_3G005180	Cucurbita maxima (Rimu)	cmacucB0026
CsaV3_3G005180	Cucurbita maxima (Rimu)	cmacucB0837
CsaV3_3G005180	Cucurbita moschata (Rifu)	cmocucB0014
CsaV3_3G005180	Cucurbita moschata (Rifu)	cmocucB0372
CsaV3_3G005180	Cucurbita moschata (Rifu)	cmocucB0822
CsaV3_3G005180	Cucurbita pepo (Zucchini)	cpecucB0011
CsaV3_3G005180	Cucurbita pepo (Zucchini)	cpecucB0491
CsaV3_3G005180	Cucurbita pepo (Zucchini)	cpecucB0968