Cla005306 (gene) Watermelon (97103) v1

Overview
NameCla005306
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionAT hook motif-containing protein (AHRD V1 *-*- D7MUX9_ARALL); contains Interpro domain(s) IPR017956 AT hook, DNA-binding, conserved site
LocationChr10 : 6017843 .. 6019292 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTCAGGCTGACCAAGGAATCAGCGCTGATAATTTAGTTGATGTTCCCTTGAAGCGAAAACGTGGGCGTCCCAGAAAATATCCGAAGTTAAATTATGATGAGAATATTCTTATTGCAAAGAATAGAGGTAAAAAACATTTGGAGGCTTTTCCTATTTCTCCTGGTTCTGGAGTAAATGGAAACCAATCACATCCAACAATTCAAATTCAAAGTGTAGCTGATGGGATGCTGGGACAAGTTGTGTCTGGTGTCATTGAGGCAGTATTTGAAGCTGGATATCTTCTGTGTGTTAGGGTTGGAAACTCTGGAATCACTCTAAGGGGTGTTGTCTTTAAACCTGGGCATTATGTTCCTGTTTCAGCAGAGAATGATGTGGCCCCAGATGTTCAAATGATCAGAAGAAACACAGTTCCTCTTGCTACAGAAAATCAAGCTCCTGGAAATAACCCTAGATCCAAAAATGGAGAAGTCCCATCCCATGAATCATCAGGTGTCAAACTGGGGTTTAAATATACACCTCCACATTCTAACCGGGATGCTTTGAAAGACAATTCTATATCTTCTATACTCGCCCAAATTACCCCTTCGGGAATCTCAAGAGGTAATGTGGTCCCTGTTGTTCTACAACCTGCTAAGCTAACTAATGGACCCTCAGTTCCCACTGAAACATTTACAATTCAAACTGCTGATATTGAATCCTCAAAAGGCAAAGAGGTTCTTGTAGGTACTTTTACATCAAATGAATCAGCTCCCACCAGTGTGACGGTTGGGATTGAAAGCTTTCCTTTCCAACCCCAAACTAGCCAGCAGGTCTTACTAGATGATGTTCCGGTAGAAAATAGTTCTTATAACCAATCCTTGGTTGTGGAAGTGCATGATTCAGAAGGTAAATCAATGGCATTGCCTAGCACGCCTTTCGAGAGTCTTGTGACTGAAGTGATCAAGAGAATTCAAGCCCCCTCTTTGACAGCTGAGACGCAGACTGAGGATAACAAACCAACTGTCGCTAACGAATGCGAAGATAGCTCAGAGGTTGAAGCTAACATAGCAGCAGATGGAGCTTTGATGATTGAACCCCTAAAAGCATTGCAGCCCCTTCATGACAGTTCAGAGCCTATTCCCAAAGCTCTTGATGATGAGTCTAGAACTGGCAAAATGACTGAGCTGTTACAGGTACACAGACTTCAACTGTATTCCATATCGATCTTCAAGTATTTGGTTAGGTTACTAAATACTTTTTTCTGTATGGGAAGAACTATCTTGCTTGATGCCACTCTTGCACTAATGAAGTAACATATACTTGTGCAAGGTTTTGCAGGAAAACATGATGCAAACTCCAGAGCCATGGGCTGAAGTTCCGAACCCGGGTTTGATGCTGAAGTCAGATGAACCTGAATCGAAAACAGAGACTGGGGATGAAGAAGCTGGTAACCAAAAGCAAATCTGA

mRNA sequence

ATGAGTCAGGCTGACCAAGGAATCAGCGCTGATAATTTAGTTGATGTTCCCTTGAAGCGAAAACGTGGGCGTCCCAGAAAATATCCGAAGTTAAATTATGATGAGAATATTCTTATTGCAAAGAATAGAGGTAAAAAACATTTGGAGGCTTTTCCTATTTCTCCTGGTTCTGGAGTAAATGGAAACCAATCACATCCAACAATTCAAATTCAAAGTGTAGCTGATGGGATGCTGGGACAAGTTGTGTCTGGTGTCATTGAGGCAGTATTTGAAGCTGGATATCTTCTGTGTGTTAGGGTTGGAAACTCTGGAATCACTCTAAGGGGTGTTGTCTTTAAACCTGGGCATTATGTTCCTGTTTCAGCAGAGAATGATGTGGCCCCAGATGTTCAAATGATCAGAAGAAACACAGTTCCTCTTGCTACAGAAAATCAAGCTCCTGGAAATAACCCTAGATCCAAAAATGGAGAAGTCCCATCCCATGAATCATCAGGTGTCAAACTGGGGTTTAAATATACACCTCCACATTCTAACCGGGATGCTTTGAAAGACAATTCTATATCTTCTATACTCGCCCAAATTACCCCTTCGGGAATCTCAAGAGGTAATGTGGTCCCTGTTGTTCTACAACCTGCTAAGCTAACTAATGGACCCTCAGTTCCCACTGAAACATTTACAATTCAAACTGCTGATATTGAATCCTCAAAAGGCAAAGAGGTTCTTGTAGGTACTTTTACATCAAATGAATCAGCTCCCACCAGTGTGACGGTTGGGATTGAAAGCTTTCCTTTCCAACCCCAAACTAGCCAGCAGGTCTTACTAGATGATGTTCCGGTAGAAAATAGTTCTTATAACCAATCCTTGGTTGTGGAAGTGCATGATTCAGAAGGTAAATCAATGGCATTGCCTAGCACGCCTTTCGAGAGTCTTGTGACTGAAGTGATCAAGAGAATTCAAGCCCCCTCTTTGACAGCTGAGACGCAGACTGAGGATAACAAACCAACTGTCGCTAACGAATGCGAAGATAGCTCAGAGGTTGAAGCTAACATAGCAGCAGATGGAGCTTTGATGATTGAACCCCTAAAAGCATTGCAGCCCCTTCATGACAGTTCAGAGCCTATTCCCAAAGCTCTTGATGATGAGTCTAGAACTGGCAAAATGACTGAGCTGTTACAGGAAAACATGATGCAAACTCCAGAGCCATGGGCTGAAGTTCCGAACCCGGGTTTGATGCTGAAGTCAGATGAACCTGAATCGAAAACAGAGACTGGGGATGAAGAAGCTGGTAACCAAAAGCAAATCTGA

Coding sequence (CDS)

ATGAGTCAGGCTGACCAAGGAATCAGCGCTGATAATTTAGTTGATGTTCCCTTGAAGCGAAAACGTGGGCGTCCCAGAAAATATCCGAAGTTAAATTATGATGAGAATATTCTTATTGCAAAGAATAGAGGTAAAAAACATTTGGAGGCTTTTCCTATTTCTCCTGGTTCTGGAGTAAATGGAAACCAATCACATCCAACAATTCAAATTCAAAGTGTAGCTGATGGGATGCTGGGACAAGTTGTGTCTGGTGTCATTGAGGCAGTATTTGAAGCTGGATATCTTCTGTGTGTTAGGGTTGGAAACTCTGGAATCACTCTAAGGGGTGTTGTCTTTAAACCTGGGCATTATGTTCCTGTTTCAGCAGAGAATGATGTGGCCCCAGATGTTCAAATGATCAGAAGAAACACAGTTCCTCTTGCTACAGAAAATCAAGCTCCTGGAAATAACCCTAGATCCAAAAATGGAGAAGTCCCATCCCATGAATCATCAGGTGTCAAACTGGGGTTTAAATATACACCTCCACATTCTAACCGGGATGCTTTGAAAGACAATTCTATATCTTCTATACTCGCCCAAATTACCCCTTCGGGAATCTCAAGAGGTAATGTGGTCCCTGTTGTTCTACAACCTGCTAAGCTAACTAATGGACCCTCAGTTCCCACTGAAACATTTACAATTCAAACTGCTGATATTGAATCCTCAAAAGGCAAAGAGGTTCTTGTAGGTACTTTTACATCAAATGAATCAGCTCCCACCAGTGTGACGGTTGGGATTGAAAGCTTTCCTTTCCAACCCCAAACTAGCCAGCAGGTCTTACTAGATGATGTTCCGGTAGAAAATAGTTCTTATAACCAATCCTTGGTTGTGGAAGTGCATGATTCAGAAGGTAAATCAATGGCATTGCCTAGCACGCCTTTCGAGAGTCTTGTGACTGAAGTGATCAAGAGAATTCAAGCCCCCTCTTTGACAGCTGAGACGCAGACTGAGGATAACAAACCAACTGTCGCTAACGAATGCGAAGATAGCTCAGAGGTTGAAGCTAACATAGCAGCAGATGGAGCTTTGATGATTGAACCCCTAAAAGCATTGCAGCCCCTTCATGACAGTTCAGAGCCTATTCCCAAAGCTCTTGATGATGAGTCTAGAACTGGCAAAATGACTGAGCTGTTACAGGAAAACATGATGCAAACTCCAGAGCCATGGGCTGAAGTTCCGAACCCGGGTTTGATGCTGAAGTCAGATGAACCTGAATCGAAAACAGAGACTGGGGATGAAGAAGCTGGTAACCAAAAGCAAATCTGA

Protein sequence

MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAFPISPGSGVNGNQSHPTIQIQSVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPVSAENDVAPDVQMIRRNTVPLATENQAPGNNPRSKNGEVPSHESSGVKLGFKYTPPHSNRDALKDNSISSILAQITPSGISRGNVVPVVLQPAKLTNGPSVPTETFTIQTADIESSKGKEVLVGTFTSNESAPTSVTVGIESFPFQPQTSQQVLLDDVPVENSSYNQSLVVEVHDSEGKSMALPSTPFESLVTEVIKRIQAPSLTAETQTEDNKPTVANECEDSSEVEANIAADGALMIEPLKALQPLHDSSEPIPKALDDESRTGKMTELLQENMMQTPEPWAEVPNPGLMLKSDEPESKTETGDEEAGNQKQI
Homology
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BLAST of Cla005306 vs. TrEMBL
Match: A0A0A0L303_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077670 PE=4 SV=1)

HSP 1 Score: 750.0 bits (1935), Expect = 1.6e-213
Identity = 382/437 (87.41%), Postives = 406/437 (92.91%), Query Frame = 1 

Query: 1   MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAFPISPGSGVN 60
           MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEA PISPGSGVN
Sbjct: 1   MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVN 60

Query: 61  GNQSHPTIQIQSVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120
           GNQS PTIQIQ+VADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV
Sbjct: 61  GNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120

Query: 121 SAENDVAPDVQMIRRNTVPLATENQAPGNNPRSKNGEVPSHESSGVKLGFKYTPPHSNRD 180
           SAENDVAPDVQMIRRN +PLAT NQAP + P+SKNGE+P HESSG+KLGFKYT PHS++D
Sbjct: 121 SAENDVAPDVQMIRRNAIPLATGNQAPEDTPQSKNGEIPLHESSGLKLGFKYTTPHSSQD 180

Query: 181 ALKDNSISSILAQITPSGISRGNVVPVVLQPAKLTNGPSVPTETFTIQTADIESSKGKEV 240
           ALKDNSISSI AQITPSG  RGNVVPVVL+PAKLTNGPSVPTET TIQT DIES+KGKEV
Sbjct: 181 ALKDNSISSIFAQITPSGSLRGNVVPVVLEPAKLTNGPSVPTETLTIQTVDIESAKGKEV 240

Query: 241 LVGTFTSNESAPTSVTVGIESFPFQPQTSQQVLLDDVPVENSSYNQSLVVEVHDSEGKSM 300
           LVGT T +ESAPTSVTVGIE+  FQPQT+QQVL+DDV VENSS+NQSLVVEVHDSEGKSM
Sbjct: 241 LVGTSTLSESAPTSVTVGIEN--FQPQTTQQVLIDDVQVENSSHNQSLVVEVHDSEGKSM 300

Query: 301 ALPSTPFESLVTEVIKRIQAPSLTAETQTEDNKPTV---ANECEDSSEVEANIAADGALM 360
           ALPSTPFESLVTEVIKRIQ PSLTAETQTEDNKP+V   A EC+D SEVEANI ADGALM
Sbjct: 301 ALPSTPFESLVTEVIKRIQTPSLTAETQTEDNKPSVTISAKECQDGSEVEANIIADGALM 360

Query: 361 IEPLKALQPLHDSSEPIPKALDDESRTGKMTELLQENMMQTPEPWAEVPNPGLMLKSDEP 420
           IEPLKA+QPLH+SSEPIPKALDDES+TGK+TELLQENM+QTPEPWAE  NPG MLKSDEP
Sbjct: 361 IEPLKAVQPLHESSEPIPKALDDESKTGKITELLQENMIQTPEPWAEAQNPGFMLKSDEP 420

Query: 421 ESKTETGDEEAGNQKQI 435
           ESK E GDE +G+QKQI
Sbjct: 421 ESKKEIGDENSGSQKQI 435

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BLAST of Cla005306 vs. TrEMBL
Match: G9BBD9_ELYEL (Putative uncharacterized protein ATH-1 OS=Elymus elongatus GN=ATH-1 PE=2 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 1.7e-130
Identity = 240/252 (95.24%), Postives = 242/252 (96.03%), Query Frame = 1 

Query: 1   MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAFPISPGSGVN 60
           MSQADQGISADNLVDVPLKRKRGRP KYPKL+ DENILIAKNRGKKHLEAFPISPGSGVN
Sbjct: 1   MSQADQGISADNLVDVPLKRKRGRPGKYPKLSCDENILIAKNRGKKHLEAFPISPGSGVN 60

Query: 61  GNQSHPTIQIQSVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120
           G+QSHPTIQIQSVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV
Sbjct: 61  GDQSHPTIQIQSVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120

Query: 121 SAENDVAPDVQMIRRNTVPLATENQAPGNNPRSKNGEVPSHESSGVKLGFKYTPPHSNRD 180
           SAENDVAPDVQMI RNTVPLATENQAPGNNPRSKNGEVPSHESSGVKLGFKYTPPHSNRD
Sbjct: 121 SAENDVAPDVQMIGRNTVPLATENQAPGNNPRSKNGEVPSHESSGVKLGFKYTPPHSNRD 180

Query: 181 ALKDNSISSILAQITPSGISRGNVVPVVLQPAKLTNGPSVPTETFTIQTADIESSKGKEV 240
           ALKDNSISSILAQITPSGISRGNVVPVVLQPAKLTNGPSVPTETFTIQTADIESSKGKEV
Sbjct: 181 ALKDNSISSILAQITPSGISRGNVVPVVLQPAKLTNGPSVPTETFTIQTADIESSKGKEV 240

Query: 241 LVGTFTSNESAP 253
           LVGT       P
Sbjct: 241 LVGTLHQMNQLP 252

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BLAST of Cla005306 vs. TrEMBL
Match: B9SAC9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0584960 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 3.5e-70
Identity = 187/442 (42.31%), Postives = 247/442 (55.88%), Query Frame = 1 

Query: 1   MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYD--ENILIAKNRGKKHLEAFPISPGS- 60
           MS+A+QG + D    VP+KRKRGRPRKYPK   D   +    +     H E + + P S 
Sbjct: 1   MSEANQGNNPDASAIVPVKRKRGRPRKYPKSGLDPARDSHAPRGHNPNHGERYRVPPESV 60

Query: 61  GVNGNQSHPTIQIQSVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHY 120
           GV+GNQ      + +  D M+GQ V G+IEA F+AGYLL VRV NS  TLRGVVFK GHY
Sbjct: 61  GVHGNQPRQVDPVNNPTDLMVGQTVHGIIEAAFDAGYLLTVRVSNSETTLRGVVFKAGHY 120

Query: 121 VPVSAENDVAPDVQMIRRNTVPLATENQAPGNNPRSKNGEVPSHES-SGVKLGFKYTPPH 180
           VPVSA+NDVAP VQMIRRN +PL  EN A          +V SH S S  + G  +    
Sbjct: 121 VPVSADNDVAPGVQMIRRNEMPLPRENYA----------QVHSHNSRSRERNGNVHAARV 180

Query: 181 SNRDALKDNSISSILAQITPSGISRGNVVPVVLQPAKLTNGPSVPTETFTIQTADIESSK 240
           +N    K   +SS+  + TPSG+S GN+VP VLQP   +NGP+    +   Q     +SK
Sbjct: 181 ANPVVSKGKQVSSVATE-TPSGVSGGNLVPAVLQPINSSNGPAGEPSSIAAQPDHAMASK 240

Query: 241 GKEVLVGTFTSNESAPTSVTVGIES-FPFQPQTSQQVLLDDVPVENSSYNQSLVVEVHDS 300
           GK+VLV    SN S PT     +++   FQ Q ++QV    +  E       L   + ++
Sbjct: 241 GKQVLVDAHPSNGSTPTEQVQAVQTHLQFQFQNNRQVTPSGIQQE-----AGLPKLLQEA 300

Query: 301 EGKSMALPSTPFESLVTEVIKRIQAPSLTAETQTEDNKPTVANECEDSSEVEANIAADGA 360
           E KSM LP+ PFE L+TEVIKR Q P+ + ET T         +   ++E + N  +D A
Sbjct: 301 EAKSMELPAMPFERLLTEVIKRNQVPTQSTETDTSSAGKLSTKDSSIATEDDVN-DSDQA 360

Query: 361 LMIEPLKALQP-LHDSSEPIPKALDDESRTGKMTEL---LQENMMQTPEPWAEVPNPGLM 420
           L +EPL+A+QP LH+    +   L++  RTGKMTEL   LQE M +     A+       
Sbjct: 361 LSVEPLQAVQPDLHNHPTVVLTPLEN-YRTGKMTELLQVLQERMTENKTTHAQDLTADHK 420

Query: 421 LKSDEPES-KTETGDEEAGNQK 433
            K DE  S + E GDE +G+ K
Sbjct: 421 PKLDEWRSQEPEDGDEGSGHSK 424

[Close]
BLAST of Cla005306 vs. TrEMBL
Match: A0A067KSC5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00878 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 5.5e-68
Identity = 185/436 (42.43%), Postives = 238/436 (54.59%), Query Frame = 1 

Query: 1   MSQADQGISADNLVDVPLKRKRGRPRKYPKL--NYDENILIAKNRGKKHLEAFPISPGS- 60
           MS+A+QG + D    VP+KRKRGRPRKYP+   N+  N   ++N+   H  +  + PG  
Sbjct: 1   MSEANQGNNPDASAIVPVKRKRGRPRKYPRPDPNHGGNAHASRNQNPNHGGSSRVPPGFV 60

Query: 61  GVNGNQSHPTIQIQSVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHY 120
            VNGNQ      +    D M+GQVV GVIEA F+AGYLL VRVGNS  TLRGVVFKPGHY
Sbjct: 61  RVNGNQPRQEDPVIDANDVMVGQVVHGVIEAAFDAGYLLSVRVGNSETTLRGVVFKPGHY 120

Query: 121 VPVSAENDVAPDVQMIRRNTVPLATENQAPGNNPRSKNGEVPSHESSGVKLGFKYTPPHS 180
           VPVSA+NDVAP VQMIRRN +            PR  N +V SH  S  + G  + P  +
Sbjct: 121 VPVSADNDVAPGVQMIRRNEIQF----------PRENNPQVHSHNRSRERNGTVHAPRAT 180

Query: 181 NRDALK-DNSISSILAQITPSGISRGNVVPVVLQPAKLTNGPSVPTETFTIQTADIESSK 240
           N    K    + S+ +Q +  GISRGNVVPVVLQP  L+NG +    +   Q A    SK
Sbjct: 181 NPVVPKIRQQVPSVGSQSSSPGISRGNVVPVVLQPIDLSNGVAGELSSVATQPAHAVGSK 240

Query: 241 GKEVLVGTFTSNESAPTSVTVGIES--FPFQPQTSQQVLLDDVPVENSSYNQSLVVEVHD 300
           GK+ L     SN S P +    IE+    FQ Q + QV+   +  E +  NQ+       
Sbjct: 241 GKQALDAAQPSNGSPPANQLQAIETQLLHFQSQNNHQVMSTGIQKE-AGLNQN------- 300

Query: 301 SEGKSMALPSTPFESLVTEVIKRIQAPSLTAETQTEDNKPTVANECEDSSEVEANIAADG 360
               S      PFE L+TEVIKR Q PS + E  T     + A E +DSS       AD 
Sbjct: 301 ----SAEAAGMPFEKLLTEVIKRTQVPSPSKENNTSSTVKSCA-EDDDSS-------ADL 360

Query: 361 ALMIEPLKALQPLHDSSEPIPKALDDESRTGKMTELLQENMMQTPEPWAEVPNPGLMLKS 420
            L +EPL+++QP+ ++   +     +  RTGKMTELLQ      P+    V +P   +K 
Sbjct: 361 PLSVEPLQSVQPVLNNHPAVLSRPLENYRTGKMTELLQVLQENMPQNQVTV-DP--RMKE 403

Query: 421 DEPESKTETGDEEAGN 431
           DE   +TE GDE+ GN
Sbjct: 421 DELGPETEHGDEDGGN 403

[Close]
BLAST of Cla005306 vs. TrEMBL
Match: B9I0E4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s14190g PE=4 SV=2)

HSP 1 Score: 261.2 bits (666), Expect = 2.3e-66
Identity = 173/419 (41.29%), Postives = 233/419 (55.61%), Query Frame = 1 

Query: 1   MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDEN--ILIAKNRGKKHLEAFPISPG-S 60
           MS+ +QG + D    +PLKRKRGRPRKYPKL  D N    + +++   H E    +PG  
Sbjct: 1   MSEVNQGNNPDASAIIPLKRKRGRPRKYPKLEVDHNGNAYVPRDQNPNHGENARTTPGFG 60

Query: 61  GVNGNQSHPTIQIQSVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHY 120
           GVNGN+ H    +    D M+GQ V G+IEA F+AGYLL VRVG++  TLRGVVFKPGHY
Sbjct: 61  GVNGNRPHQVDPVNDAIDSMIGQSVHGIIEATFDAGYLLNVRVGDTETTLRGVVFKPGHY 120

Query: 121 VPVSAENDVAPDVQMIRRNTVPLATENQAPGNNPRSKNGEVPSHESSGVKL-GFKYTPPH 180
           VPV  END+AP V MIRRN +PL          PR  N +V S       + G  +    
Sbjct: 121 VPVMPENDIAPGVPMIRRNEIPL----------PRESNTKVHSRNPGPRDINGTAHAARA 180

Query: 181 SNRDALKDNSISSILAQITPSGISRGNVVPVVLQPAKLTNGPSVPTETFTIQTADIESSK 240
           +N    K   + S++ Q TP+ ISRGN+VPVVLQP  L+NG   P+ + T QT    +SK
Sbjct: 181 ANPAGSKGKQVLSVVPQ-TPA-ISRGNLVPVVLQPVNLSNG--APSASATSQTPHPVTSK 240

Query: 241 GKEVLVGTFTSNESAPTSVTVGIESFPFQPQTSQQVLLDDVPVENSSYNQSLVVEVHDSE 300
           GK++     +SN S PT+     E   FQ Q + QV+   +    S +NQ+    +H+SE
Sbjct: 241 GKQIRDAAHSSNGSTPTN-----EVMQFQSQNNHQVMHSGLQ-NPSPFNQTQAGGLHESE 300

Query: 301 GKSMALPSTPFESLVTEVIKRIQAPSLTAETQTEDNKPTVANECEDSSEV-EANIA-ADG 360
                    PFE L+T+VIKR+ AP  + +T   ++   V    +DS  V E +++  D 
Sbjct: 301 ANPTKTTGVPFEKLLTDVIKRVPAPLQSTDT---NSSSAVNLPVKDSGIVAEKDVSDTDQ 360

Query: 361 ALMIEPLKALQPLHDSSEPIPKALDDESRTGKMTEL---LQENMMQTPEPWAEVPNPGL 411
           AL +EPL+ LQP       +     +E +TGKMT+L   LQE+M   P    E P  GL
Sbjct: 361 ALSVEPLQVLQPNVGCHPAVASRPSEEYKTGKMTQLLQVLQESMADNPGACTEGPAAGL 396

[Close]
BLAST of Cla005306 vs. NCBI nr
Match: gi|778676113|ref|XP_011650531.1| (PREDICTED: uncharacterized protein LOC101213958 isoform X2 [Cucumis sativus])

HSP 1 Score: 750.0 bits (1935), Expect = 2.4e-213
Identity = 382/437 (87.41%), Postives = 406/437 (92.91%), Query Frame = 1 

Query: 1   MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAFPISPGSGVN 60
           MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEA PISPGSGVN
Sbjct: 1   MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVN 60

Query: 61  GNQSHPTIQIQSVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120
           GNQS PTIQIQ+VADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV
Sbjct: 61  GNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120

Query: 121 SAENDVAPDVQMIRRNTVPLATENQAPGNNPRSKNGEVPSHESSGVKLGFKYTPPHSNRD 180
           SAENDVAPDVQMIRRN +PLAT NQAP + P+SKNGE+P HESSG+KLGFKYT PHS++D
Sbjct: 121 SAENDVAPDVQMIRRNAIPLATGNQAPEDTPQSKNGEIPLHESSGLKLGFKYTTPHSSQD 180

Query: 181 ALKDNSISSILAQITPSGISRGNVVPVVLQPAKLTNGPSVPTETFTIQTADIESSKGKEV 240
           ALKDNSISSI AQITPSG  RGNVVPVVL+PAKLTNGPSVPTET TIQT DIES+KGKEV
Sbjct: 181 ALKDNSISSIFAQITPSGSLRGNVVPVVLEPAKLTNGPSVPTETLTIQTVDIESAKGKEV 240

Query: 241 LVGTFTSNESAPTSVTVGIESFPFQPQTSQQVLLDDVPVENSSYNQSLVVEVHDSEGKSM 300
           LVGT T +ESAPTSVTVGIE+  FQPQT+QQVL+DDV VENSS+NQSLVVEVHDSEGKSM
Sbjct: 241 LVGTSTLSESAPTSVTVGIEN--FQPQTTQQVLIDDVQVENSSHNQSLVVEVHDSEGKSM 300

Query: 301 ALPSTPFESLVTEVIKRIQAPSLTAETQTEDNKPTV---ANECEDSSEVEANIAADGALM 360
           ALPSTPFESLVTEVIKRIQ PSLTAETQTEDNKP+V   A EC+D SEVEANI ADGALM
Sbjct: 301 ALPSTPFESLVTEVIKRIQTPSLTAETQTEDNKPSVTISAKECQDGSEVEANIIADGALM 360

Query: 361 IEPLKALQPLHDSSEPIPKALDDESRTGKMTELLQENMMQTPEPWAEVPNPGLMLKSDEP 420
           IEPLKA+QPLH+SSEPIPKALDDES+TGK+TELLQENM+QTPEPWAE  NPG MLKSDEP
Sbjct: 361 IEPLKAVQPLHESSEPIPKALDDESKTGKITELLQENMIQTPEPWAEAQNPGFMLKSDEP 420

Query: 421 ESKTETGDEEAGNQKQI 435
           ESK E GDE +G+QKQI
Sbjct: 421 ESKKEIGDENSGSQKQI 435

[Close]
BLAST of Cla005306 vs. NCBI nr
Match: gi|778676104|ref|XP_011650529.1| (PREDICTED: uncharacterized protein LOC101213958 isoform X1 [Cucumis sativus])

HSP 1 Score: 744.6 bits (1921), Expect = 9.9e-212
Identity = 382/440 (86.82%), Postives = 406/440 (92.27%), Query Frame = 1 

Query: 1   MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAFPISPGSGVN 60
           MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEA PISPGSGVN
Sbjct: 1   MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVN 60

Query: 61  GNQSHPTIQIQSVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120
           GNQS PTIQIQ+VADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV
Sbjct: 61  GNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120

Query: 121 SAENDVAPDVQMIRRNTVPLATENQAPGNNPRSKNGEVPSHESSGVKLGFKYTPPHSNRD 180
           SAENDVAPDVQMIRRN +PLAT NQAP + P+SKNGE+P HESSG+KLGFKYT PHS++D
Sbjct: 121 SAENDVAPDVQMIRRNAIPLATGNQAPEDTPQSKNGEIPLHESSGLKLGFKYTTPHSSQD 180

Query: 181 ALKDNSISSILAQITPSGISRGNVVPVVLQPAKLTNGPSVPTETFTIQTADIESSKGKEV 240
           ALKDNSISSI AQITPSG  RGNVVPVVL+PAKLTNGPSVPTET TIQT DIES+KGKEV
Sbjct: 181 ALKDNSISSIFAQITPSGSLRGNVVPVVLEPAKLTNGPSVPTETLTIQTVDIESAKGKEV 240

Query: 241 LVGTFTSNESAPTSVTVGIESFPFQPQTSQQVLLDDVPVENSSYNQSLVVEVHDSEGKSM 300
           LVGT T +ESAPTSVTVGIE+  FQPQT+QQVL+DDV VENSS+NQSLVVEVHDSEGKSM
Sbjct: 241 LVGTSTLSESAPTSVTVGIEN--FQPQTTQQVLIDDVQVENSSHNQSLVVEVHDSEGKSM 300

Query: 301 ALPSTPFESLVTEVIKRIQAPSLTAETQTEDNKPTV---ANECEDSSEVEANIAADGALM 360
           ALPSTPFESLVTEVIKRIQ PSLTAETQTEDNKP+V   A EC+D SEVEANI ADGALM
Sbjct: 301 ALPSTPFESLVTEVIKRIQTPSLTAETQTEDNKPSVTISAKECQDGSEVEANIIADGALM 360

Query: 361 IEPLKALQPLHDSSEPIPKALDDESRTGKMTEL---LQENMMQTPEPWAEVPNPGLMLKS 420
           IEPLKA+QPLH+SSEPIPKALDDES+TGK+TEL   LQENM+QTPEPWAE  NPG MLKS
Sbjct: 361 IEPLKAVQPLHESSEPIPKALDDESKTGKITELLQVLQENMIQTPEPWAEAQNPGFMLKS 420

Query: 421 DEPESKTETGDEEAGNQKQI 435
           DEPESK E GDE +G+QKQI
Sbjct: 421 DEPESKKEIGDENSGSQKQI 438

[Close]
BLAST of Cla005306 vs. NCBI nr
Match: gi|659126916|ref|XP_008463428.1| (PREDICTED: uncharacterized protein LOC103501592 isoform X2 [Cucumis melo])

HSP 1 Score: 744.6 bits (1921), Expect = 9.9e-212
Identity = 379/437 (86.73%), Postives = 408/437 (93.36%), Query Frame = 1 

Query: 1   MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAFPISPGSGVN 60
           MSQADQGIS+DNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEA PISPGSGVN
Sbjct: 1   MSQADQGISSDNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVN 60

Query: 61  GNQSHPTIQIQSVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120
           GNQS PTIQIQ+VADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV
Sbjct: 61  GNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120

Query: 121 SAENDVAPDVQMIRRNTVPLATENQAPGNNPRSKNGEVPSHESSGVKLGFKYTPPHSNRD 180
           SAENDVAP+VQMIRRN +PLAT NQAP +NP+SKNGE+PSHESSG+KLGFKY+PPHS+RD
Sbjct: 121 SAENDVAPNVQMIRRNAIPLATGNQAPEDNPQSKNGEIPSHESSGLKLGFKYSPPHSSRD 180

Query: 181 ALKDNSISSILAQITPSGISRGNVVPVVLQPAKLTNGPSVPTETFTIQTADIESSKGKEV 240
           ALKDNSISSI AQITPSG SRGNVVPVVLQ AKLTNGPSVPTET TIQT DIES+KGKEV
Sbjct: 181 ALKDNSISSIFAQITPSGSSRGNVVPVVLQAAKLTNGPSVPTETLTIQTVDIESAKGKEV 240

Query: 241 LVGTFTSNESAPTSVTVGIESFPFQPQTSQQVLLDDVPVENSSYNQSLVVEVHDSEGKSM 300
           LVGT   +ESAPTSVTVGIE+  FQPQT+QQVL++DV VENSS+NQSLVVEVHDSEGK M
Sbjct: 241 LVGTSALSESAPTSVTVGIEN--FQPQTTQQVLINDVQVENSSHNQSLVVEVHDSEGKLM 300

Query: 301 ALPSTPFESLVTEVIKRIQAPSLTAETQTEDNKPTV---ANECEDSSEVEANIAADGALM 360
           ALPSTPFESLVTEVIKRIQ PSLTAETQ+EDNKP+V   A EC+D  EVEANIAADGALM
Sbjct: 301 ALPSTPFESLVTEVIKRIQTPSLTAETQSEDNKPSVTISAKECQDGLEVEANIAADGALM 360

Query: 361 IEPLKALQPLHDSSEPIPKALDDESRTGKMTELLQENMMQTPEPWAEVPNPGLMLKSDEP 420
           IEPLKA+QPL++SSEPIPKALDDES+TGK+TELLQENM+QTPEPW E  NPGLMLKSDEP
Sbjct: 361 IEPLKAVQPLNESSEPIPKALDDESKTGKITELLQENMIQTPEPWGEAQNPGLMLKSDEP 420

Query: 421 ESKTETGDEEAGNQKQI 435
           ESK E GDE++G+QKQI
Sbjct: 421 ESKKEIGDEKSGSQKQI 435

[Close]
BLAST of Cla005306 vs. NCBI nr
Match: gi|659126906|ref|XP_008463423.1| (PREDICTED: uncharacterized protein LOC103501592 isoform X1 [Cucumis melo])

HSP 1 Score: 739.2 bits (1907), Expect = 4.2e-210
Identity = 379/440 (86.14%), Postives = 408/440 (92.73%), Query Frame = 1 

Query: 1   MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAFPISPGSGVN 60
           MSQADQGIS+DNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEA PISPGSGVN
Sbjct: 1   MSQADQGISSDNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAIPISPGSGVN 60

Query: 61  GNQSHPTIQIQSVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120
           GNQS PTIQIQ+VADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV
Sbjct: 61  GNQSLPTIQIQNVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120

Query: 121 SAENDVAPDVQMIRRNTVPLATENQAPGNNPRSKNGEVPSHESSGVKLGFKYTPPHSNRD 180
           SAENDVAP+VQMIRRN +PLAT NQAP +NP+SKNGE+PSHESSG+KLGFKY+PPHS+RD
Sbjct: 121 SAENDVAPNVQMIRRNAIPLATGNQAPEDNPQSKNGEIPSHESSGLKLGFKYSPPHSSRD 180

Query: 181 ALKDNSISSILAQITPSGISRGNVVPVVLQPAKLTNGPSVPTETFTIQTADIESSKGKEV 240
           ALKDNSISSI AQITPSG SRGNVVPVVLQ AKLTNGPSVPTET TIQT DIES+KGKEV
Sbjct: 181 ALKDNSISSIFAQITPSGSSRGNVVPVVLQAAKLTNGPSVPTETLTIQTVDIESAKGKEV 240

Query: 241 LVGTFTSNESAPTSVTVGIESFPFQPQTSQQVLLDDVPVENSSYNQSLVVEVHDSEGKSM 300
           LVGT   +ESAPTSVTVGIE+  FQPQT+QQVL++DV VENSS+NQSLVVEVHDSEGK M
Sbjct: 241 LVGTSALSESAPTSVTVGIEN--FQPQTTQQVLINDVQVENSSHNQSLVVEVHDSEGKLM 300

Query: 301 ALPSTPFESLVTEVIKRIQAPSLTAETQTEDNKPTV---ANECEDSSEVEANIAADGALM 360
           ALPSTPFESLVTEVIKRIQ PSLTAETQ+EDNKP+V   A EC+D  EVEANIAADGALM
Sbjct: 301 ALPSTPFESLVTEVIKRIQTPSLTAETQSEDNKPSVTISAKECQDGLEVEANIAADGALM 360

Query: 361 IEPLKALQPLHDSSEPIPKALDDESRTGKMTEL---LQENMMQTPEPWAEVPNPGLMLKS 420
           IEPLKA+QPL++SSEPIPKALDDES+TGK+TEL   LQENM+QTPEPW E  NPGLMLKS
Sbjct: 361 IEPLKAVQPLNESSEPIPKALDDESKTGKITELLQVLQENMIQTPEPWGEAQNPGLMLKS 420

Query: 421 DEPESKTETGDEEAGNQKQI 435
           DEPESK E GDE++G+QKQI
Sbjct: 421 DEPESKKEIGDEKSGSQKQI 438

[Close]
BLAST of Cla005306 vs. NCBI nr
Match: gi|338784270|gb|AEI98840.1| (hypothetical protein [Thinopyrum elongatum])

HSP 1 Score: 474.2 bits (1219), Expect = 2.5e-130
Identity = 240/252 (95.24%), Postives = 242/252 (96.03%), Query Frame = 1 

Query: 1   MSQADQGISADNLVDVPLKRKRGRPRKYPKLNYDENILIAKNRGKKHLEAFPISPGSGVN 60
           MSQADQGISADNLVDVPLKRKRGRP KYPKL+ DENILIAKNRGKKHLEAFPISPGSGVN
Sbjct: 1   MSQADQGISADNLVDVPLKRKRGRPGKYPKLSCDENILIAKNRGKKHLEAFPISPGSGVN 60

Query: 61  GNQSHPTIQIQSVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120
           G+QSHPTIQIQSVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV
Sbjct: 61  GDQSHPTIQIQSVADGMLGQVVSGVIEAVFEAGYLLCVRVGNSGITLRGVVFKPGHYVPV 120

Query: 121 SAENDVAPDVQMIRRNTVPLATENQAPGNNPRSKNGEVPSHESSGVKLGFKYTPPHSNRD 180
           SAENDVAPDVQMI RNTVPLATENQAPGNNPRSKNGEVPSHESSGVKLGFKYTPPHSNRD
Sbjct: 121 SAENDVAPDVQMIGRNTVPLATENQAPGNNPRSKNGEVPSHESSGVKLGFKYTPPHSNRD 180

Query: 181 ALKDNSISSILAQITPSGISRGNVVPVVLQPAKLTNGPSVPTETFTIQTADIESSKGKEV 240
           ALKDNSISSILAQITPSGISRGNVVPVVLQPAKLTNGPSVPTETFTIQTADIESSKGKEV
Sbjct: 181 ALKDNSISSILAQITPSGISRGNVVPVVLQPAKLTNGPSVPTETFTIQTADIESSKGKEV 240

Query: 241 LVGTFTSNESAP 253
           LVGT       P
Sbjct: 241 LVGTLHQMNQLP 252

The following BLAST results are available for this feature:
BLAST of Cla005306 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L303_CUCSA1.6e-21387.41Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077670 PE=4 SV=1[more]
G9BBD9_ELYEL1.7e-13095.24Putative uncharacterized protein ATH-1 OS=Elymus elongatus GN=ATH-1 PE=2 SV=1[more]
B9SAC9_RICCO3.5e-7042.31Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0584960 PE=4 SV=1[more]
A0A067KSC5_JATCU5.5e-6842.43Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00878 PE=4 SV=1[more]
B9I0E4_POPTR2.3e-6641.29Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s14190g PE=4 SV=2[more]
BLAST of Cla005306 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778676113|ref|XP_011650531.1|2.4e-21387.41PREDICTED: uncharacterized protein LOC101213958 isoform X2 [Cucumis sativus][more]
gi|778676104|ref|XP_011650529.1|9.9e-21286.82PREDICTED: uncharacterized protein LOC101213958 isoform X1 [Cucumis sativus][more]
gi|659126916|ref|XP_008463428.1|9.9e-21286.73PREDICTED: uncharacterized protein LOC103501592 isoform X2 [Cucumis melo][more]
gi|659126906|ref|XP_008463423.1|4.2e-21086.14PREDICTED: uncharacterized protein LOC103501592 isoform X1 [Cucumis melo][more]
gi|338784270|gb|AEI98840.1|2.5e-13095.24hypothetical protein [Thinopyrum elongatum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0043565 sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla005306Cla005306.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34682FAMILY NOT NAMEDcoord: 2..431
score: 2.9
NoneNo IPR availablePANTHERPTHR34682:SF1AT HOOK MOTIF-CONTAINING PROTEINcoord: 2..431
score: 2.9