CsaV3_3G004810 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G004810
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	GrpE protein homolog
Location	chr3 : 4054879 .. 4059641 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTAGTTTTGATGTTATTTTGAGTTAGGTGACGTATATGTAAATCAACACAACCTCTTCCTCAAGCAACTACAACGACGTCGTTTACTCAAACAAAAGTAACGGGGTAGTTTCGTCAATTCCCCTTAAAGCCACCGCAAAACCCTCTTCTTCTTCTTCCTTCCTTCCTTCCTTCCTCCCTCGTCTTCTTCTTCTCCTCAACCACATTTCTCTTTGTTCCTTTCCCTTCCTTCGCCTGGACAAACCTTTATCCCATCTTCCTCTCCGCCTTTTCTTCACCTTTATCATTGTTAGCCATGTTCGTCACGAAGCTTTTCTCACGCTCCTCCCGCACCATTCTTCGCAGCTCGCTGCTCTCGTCGGCCCCTCAATCCGACAAACCCATTCACTTCCCAATTCTCACTAATCGATTGCACTCTCTTGCTAACCAATCAAAAGACAAGGTTCGATTTAAACACCTGCTACTTACTCCGTTTTGTTTTCTGCTACGAGGGTTTAGCTAGGGTTTTGGGACTTTCTCAAAATTTCTAACGTGACTGCAATTTAGTTATTCGAATTCCTTCCATTTTTATAAAGTTTATATGATTTTAGTTGCCTTTTAATTCTTTTCTGTTGTTGTAAGCATTTGGGACCTCCCCCATCTTAGTTCCTTTTCTGGGTGTCTTGGATTTAATATTGTTGATCAACTTTGGTGTATTTTTTAATATATTTTCTTAAATTGGAGAGCGTTTATAATTCTTTTTCTATTCAGGAATCAACGTTATATCGTTCATTTTTTCTTCAAAAACATGGATTATCAACATCTGCATCCCCTGAGACTTCTAATAAGGAAAATGGCAATACAGTTCCAAGGAATGGGGGCTCTAAAACTAATGCAGAGCCAACGGCTGAAACTAATGGTCGAACCGGAGAATCAGGTTTCATATCCGGATGTTGATATTTGATGCATGTATTTGATGGAGTACTAACAACTCTGATTTCTGTTTCAGATTCTGATAGCGATGACAATCTTTCCATGGATGATCTGGTGAAAGTTGTAGCTGAGAAGGAAGAGCTTTTGAAGGTAAAGCACAAAGAGATTGAACAAATGCAAGATAAGGTTATTCGCACTTACGCAGAGATGGAGAATGTGATGGCCAGGACAAAGCGTGAAGCTGAGAATTCGAAGAAGTTTGCTATACAGGTTTTGATTTAAGTTTGGCCCATCTATGGTCTCTGACATTTGTTATCATGCTGCAATGACATGGGGGAATGCATTAATATTCACTTACAAGACTCTCTCCTGACATCCATCATTTGTATGTATTTTAGAACTTTGCAAAGAGTTTGCTGGACATTTGCAATGACATGGGAATGCCTATCTATGGTCTTTAACATTTGTTATCATGTTGCAATGACATGGGGGAATGCATTAATATTCACTTACAAGACTCTCTCCTGACATCAATCATTTATATGTATTGTAGAACTTTGCAAAGAGTTTGCTGGACGTTGCAGACAATCTAGGACGAGCTTCATCCGTAGTCAAGGGAAGTTTCTCAAAGATTGATTCAACTAATGACTCTTCAGGGGCAGTACCCTTACTGAAAACACTTATTGACGGTGTTGAAATGACGGAGAAACAGCTGTCTGAGGTTAGTATCTCATGCACAAATTGTTCTTGAGGTTTGCTGTTCACTTGAATCTGTTTTTATTACATTAATAATTGGATGATTTAAGTGGTGAAGTTCCTCAAATTTTATGAAAGAAGAACCCATGTCAATTTGTTTAGGTTGTTGGCATCTCATGTATTTTATATTTCAATTTCTAAGTTGTATGATTGGGTAAAATGGTGAGAATTTTGATCCCGTCGAACTTGTAAGTTCTATGTGAAGAATTAGCCAATTGAAGCCATCTGCTGCATTACTATAAATTTAAAATATTAAATTCAACTTAACTAATTGGTCAATGGGTATCTCCGTCTGATTTTGACTCTCCATGGCATATATGTGGCAGTGAAGTTCAACTAAATTTTGTTGCTTGCAGGTGTTAAAGAAGTATGGAGTGGAAATGTTTGATCCTACAAATGAGCCATTTGATCCACATAGGCACAATGCAGTTTTTCAAGTACCAGATGGTTCTAAGGCACCTGGTACTGTTGCAGCTGTATTGAAGGTATTTCCTGTGGCCCTAATCATTGTTTTCTACATTTTACTATTATGGTATTTCAAATTCTTCATACACCTTTAGTTTGCATATGAAGTTCGTGTGTGGCAAATTTTAGGGTAGACAAAGTTTACGTTCTCATAAATAATTAAACAGTAATTTTGTGAGCTTTTTCTTTGATCAATTAATTTTTCTCAAGAGCCATCAGGCAAGGGTTAATTTGTAGCTCTAGCACAAGAGAATTGGTTGTATCTATAACTTGTAAGTTGTCTGAATATCTTTGTTTCCTATACATTTAGATGTGGGTACAAAATCTTAGGAGATATTCATAGCAAATATGGATGTCTTCGTTTGTTTCTACAATTTTGAAAATCTGGTGTAAATTATAAATGTTTGTTTTTATTTTTGGTGATCATTATGGCCTGACTTCGAGTAGAAGAAAAAGCTATGAACTCAAATGTTACAAGGGTGTTTTAGCTCACAATTGTATTAACCATGGATTTGTATAGCATAAAATGGGGACTATAAGCTTGGGTAGCCATTGTTTTGGTTGTATAGGGAGTATAAAATTGGGGAGCACTAGCTTCTATTTGGTTGCATAAAAGAATGAATCACCTAATCTTCAGATCAGGTAGCTTCTATTTGATTAATGGGGTTTGTTGGGGGGAAATAACTACGTAGCATGAGCATACTGTTTTAAAAGTTTTAGATTTAAGTGGTTTGTGTGTTATCAAGTATGTAGCCTTGTATTTTTTGAAGTGGTTAGCGCACTAAAGCATGAAGTGCAAAAATAGGTGAGGTTTCTTTAGTGAATAGCTGAAATGTATAAAGAATTTTTTATATAAGAGAAAATATAATATGTTGAATAGTAGGATAATGAAACATCTATGAAATTAATGTTTTATAGGAGATTGTTCTGAGAACTTATGGTGTCTGGACCACTCCTGGTTCTTTCGTAAGGGGAGATAGCCTTCATTTCAGCTTGTTTTCTGAGGGGTGAAATTAGATAACGAGACATTGCCATTTAATCTATTTTTCTGAAATTCGTTCTGAGCTTCTGGTCTCTACACTAGGAGTGCTGCTCAAGCTTAAGGGAACAAGAATGGATCTTACATTTAATGAGAATAAATTCTTAAAGAAATAGTTAAAAACATTCTTAGTGGTGCTCATCTACTATATTAGTACCAAATGAACAAATCGCCTATTGTATGACCTTTTTTAAATCCAATCGCTGTAGCAAGAATAAATTGCAAATGATATAAGAAAAATAGGCCAGGATAATAACTTGACATTCTTAATCTATTAGCATTATGAAAAAATGGCTTCAAAACCCAAAAAAGAATAACAGTTAGGAAAGGGAATTAAATCCTTGATGTTTCTTGAGATCTGCATTGGGGGGGGGGGGGGGGGGGGGTGATGCTATGGGCCAGAAATGTTTGGGAAAAGTTTCCGGAGGTAGAAGAAAAACTCAGTAAATGAAAAGCTTCTCTCAGAGTTTGCCATTGAGATGTGCGATGCTTTCTATAGCTCAATACCAGATTTATAAAGAACTTGTTGAGAAAAGAAAGTATTAATCACAGTATTGATTTTTTAGTTAATGGTTACTGAATTAGACCGGATGTAATGTAATGTATATTTTGAAATATCAAGTTAAAAGTAAAACTGTTCGCACACCTCTATAAGTGAGGTGATCATATATGTGCATGTACTAATATTTTATTAGAGTTATCTAGTCCTTAAACAGAAGAAGACCGGGTAACGGTATCTTTGCATTCCACAAGTTTTAATAGCGTGGGCTTGTTACCCTAGCGGGGGCAAAGTCAAACACAATAACTAAACATGTATGATATAACATTATACTTGCATCTGTTTGTCTTGTTGAAGCAGAGCTAATGTTAGAATTTGCATCAAAGCTATGATAACTGCAAACCCCTAACTGTTATTTTGTTGTTTATGTCAATAGAAAGGGTACATGCTTCATGAGCGAGTACTTCGACCTGCCGAAGTTGGTGTTACAAAAGCCGTGGAGAATGAGGATGGTGCAACGGGTGACGCAACCGAGAAGGGATCTCAAGGTTGAATTTGAAGGATTGGAAGGATGGATATTTTGGTATAAAAAGAGAAGTTTTGCTATACGGAATCTTCTATGGAAGAGGAGATGCCTAATCTAGACTTGTTAGATTGGACAGGGAAAGAAAAACAATTCATTGCTTGGATAAAATTTGATTTCGTTATGTATTTACAGAGAGATATGAGAGTATTTCCATGATTTCCTGTCAGCTCAAATTCAGAATATGCAAACACTTTCTTTGAGGCATTTTTTTTGTCAAAAAGTTAACAAAGGGCTTTCTGTCAAAGATGAACAGAAACAGAATGATGCCTACATTTTAACAGCAGGAGCAATTTATAATCTATACTAAATATAAATAGATGTTGCTGGGGATTTACTTTATTTTTGTTTACATTTTGTCTTCCATTTTTTTAGATCCCATTTAATCTTTTACTTATTCTTGGACCAAATGAGATTCTCATACTTAGATTTATGTATGTTTGAGGGTCTAATTTTTATACTGGTATAAACATGGTGTAATTGAAGGTATAATTACAGCTATTGTTATA

mRNA sequence

ATGTTCGTCACGAAGCTTTTCTCACGCTCCTCCCGCACCATTCTTCGCAGCTCGCTGCTCTCGTCGGCCCCTCAATCCGACAAACCCATTCACTTCCCAATTCTCACTAATCGATTGCACTCTCTTGCTAACCAATCAAAAGACAAGGAATCAACGTTATATCGTTCATTTTTTCTTCAAAAACATGGATTATCAACATCTGCATCCCCTGAGACTTCTAATAAGGAAAATGGCAATACAGTTCCAAGGAATGGGGGCTCTAAAACTAATGCAGAGCCAACGGCTGAAACTAATGGTCGAACCGGAGAATCAGATTCTGATAGCGATGACAATCTTTCCATGGATGATCTGGTGAAAGTTGTAGCTGAGAAGGAAGAGCTTTTGAAGGTAAAGCACAAAGAGATTGAACAAATGCAAGATAAGGTTATTCGCACTTACGCAGAGATGGAGAATGTGATGGCCAGGACAAAGCGTGAAGCTGAGAATTCGAAGAAGTTTGCTATACAGAACTTTGCAAAGAGTTTGCTGGACGTTGCAGACAATCTAGGACGAGCTTCATCCGTAGTCAAGGGAAGTTTCTCAAAGATTGATTCAACTAATGACTCTTCAGGGGCAGTACCCTTACTGAAAACACTTATTGACGGTGTTGAAATGACGGAGAAACAGCTGTCTGAGGTGTTAAAGAAGTATGGAGTGGAAATGTTTGATCCTACAAATGAGCCATTTGATCCACATAGGCACAATGCAGTTTTTCAAGTACCAGATGGTTCTAAGGCACCTGGTACTGTTGCAGCTGTATTGAAGAAAGGGTACATGCTTCATGAGCGAGTACTTCGACCTGCCGAAGTTGGTGTTACAAAAGCCGTGGAGAATGAGGATGGTGCAACGGGTGACGCAACCGAGAAGGGATCTCAAGGTTGA

Coding sequence (CDS)

ATGTTCGTCACGAAGCTTTTCTCACGCTCCTCCCGCACCATTCTTCGCAGCTCGCTGCTCTCGTCGGCCCCTCAATCCGACAAACCCATTCACTTCCCAATTCTCACTAATCGATTGCACTCTCTTGCTAACCAATCAAAAGACAAGGAATCAACGTTATATCGTTCATTTTTTCTTCAAAAACATGGATTATCAACATCTGCATCCCCTGAGACTTCTAATAAGGAAAATGGCAATACAGTTCCAAGGAATGGGGGCTCTAAAACTAATGCAGAGCCAACGGCTGAAACTAATGGTCGAACCGGAGAATCAGATTCTGATAGCGATGACAATCTTTCCATGGATGATCTGGTGAAAGTTGTAGCTGAGAAGGAAGAGCTTTTGAAGGTAAAGCACAAAGAGATTGAACAAATGCAAGATAAGGTTATTCGCACTTACGCAGAGATGGAGAATGTGATGGCCAGGACAAAGCGTGAAGCTGAGAATTCGAAGAAGTTTGCTATACAGAACTTTGCAAAGAGTTTGCTGGACGTTGCAGACAATCTAGGACGAGCTTCATCCGTAGTCAAGGGAAGTTTCTCAAAGATTGATTCAACTAATGACTCTTCAGGGGCAGTACCCTTACTGAAAACACTTATTGACGGTGTTGAAATGACGGAGAAACAGCTGTCTGAGGTGTTAAAGAAGTATGGAGTGGAAATGTTTGATCCTACAAATGAGCCATTTGATCCACATAGGCACAATGCAGTTTTTCAAGTACCAGATGGTTCTAAGGCACCTGGTACTGTTGCAGCTGTATTGAAGAAAGGGTACATGCTTCATGAGCGAGTACTTCGACCTGCCGAAGTTGGTGTTACAAAAGCCGTGGAGAATGAGGATGGTGCAACGGGTGACGCAACCGAGAAGGGATCTCAAGGTTGA

Protein sequence

MFVTKLFSRSSRTILRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDKESTLYRSFFLQKHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDDLVKVVAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVADNLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNEPFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDATEKGSQG

Homology

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BLAST of CsaV3_3G004810 vs. NCBI nr
Match: XP_004149344.1 (PREDICTED: grpE protein homolog, mitochondrial [Cucumis sativus] >KGN56097.1 hypothetical protein Csa_3G073880 [Cucumis sativus])

HSP 1 Score: 575.1 bits (1481), Expect = 1.4e-160
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 1   MFVTKLFSRSSRTILRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDKESTLYRSFFLQ 60
           MFVTKLFSRSSRTILRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDKESTLYRSFFLQ
Sbjct: 1   MFVTKLFSRSSRTILRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDKESTLYRSFFLQ 60

Query: 61  KHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDDLVKV 120
           KHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDDLVKV
Sbjct: 61  KHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDDLVKV 120

Query: 121 VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVAD 180
           VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVAD
Sbjct: 121 VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVAD 180

Query: 181 NLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNE 240
           NLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNE
Sbjct: 181 NLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNE 240

Query: 241 PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT 300
           PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT
Sbjct: 241 PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT 300

Query: 301 EKGSQG 307
           EKGSQG
Sbjct: 301 EKGSQG 306

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BLAST of CsaV3_3G004810 vs. NCBI nr
Match: XP_008449136.1 (PREDICTED: protein GrpE-like isoform X1 [Cucumis melo])

HSP 1 Score: 533.5 bits (1373), Expect = 4.8e-148
Identity = 285/306 (93.14%), Postives = 294/306 (96.08%), Query Frame = 0


Query: 1   MFVTKLFSRSSRTILRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDKESTLYRSFFLQ 60
           MFVTKLFSRSSRTILRSSLLSSA QSDKPIH PIL NR HSLANQS  KESTL+RSFFLQ
Sbjct: 1   MFVTKLFSRSSRTILRSSLLSSAAQSDKPIHLPILANRFHSLANQSNHKESTLHRSFFLQ 60

Query: 61  KHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDDLVKV 120
           K GLSTSASPETSNKENGN+ P NG SKT+AEPTAETNGRT ESDS+SDDNLS+DDLVKV
Sbjct: 61  KFGLSTSASPETSNKENGNSAPSNGSSKTDAEPTAETNGRTRESDSESDDNLSIDDLVKV 120

Query: 121 VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVAD 180
           VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFA+QNFAKSLLDVAD
Sbjct: 121 VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAVQNFAKSLLDVAD 180

Query: 181 NLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNE 240
           NLGRASSVVK SFSKIDSTNDS+GAVPLLKTL++GVEMTEKQLSEVLKKYGVEMFDPTNE
Sbjct: 181 NLGRASSVVKESFSKIDSTNDSAGAVPLLKTLLEGVEMTEKQLSEVLKKYGVEMFDPTNE 240

Query: 241 PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT 300
           PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT
Sbjct: 241 PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT 300

Query: 301 EKGSQG 307
           EKGSQG
Sbjct: 301 EKGSQG 306

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BLAST of CsaV3_3G004810 vs. NCBI nr
Match: XP_008449137.1 (PREDICTED: protein GrpE-like isoform X2 [Cucumis melo])

HSP 1 Score: 439.9 bits (1130), Expect = 7.2e-120
Identity = 249/306 (81.37%), Postives = 254/306 (83.01%), Query Frame = 0


Query: 1   MFVTKLFSRSSRTILRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDKESTLYRSFFLQ 60
           MFVTKLFSRSSRTILRSSLLSSA QSDKPIH PIL NR HSLANQS  KESTL+RSFFLQ
Sbjct: 1   MFVTKLFSRSSRTILRSSLLSSAAQSDKPIHLPILANRFHSLANQSNHKESTLHRSFFLQ 60

Query: 61  KHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDDLVKV 120
           K GLSTSASPET                                            LVKV
Sbjct: 61  KFGLSTSASPET------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVKV 120

Query: 121 VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVAD 180
           VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFA+QNFAKSLLDVAD
Sbjct: 121 VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAVQNFAKSLLDVAD 180

Query: 181 NLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNE 240
           NLGRASSVVK SFSKIDSTNDS+GAVPLLKTL++GVEMTEKQLSEVLKKYGVEMFDPTNE
Sbjct: 181 NLGRASSVVKESFSKIDSTNDSAGAVPLLKTLLEGVEMTEKQLSEVLKKYGVEMFDPTNE 240

Query: 241 PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT 300
           PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT
Sbjct: 241 PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT 300

Query: 301 EKGSQG 307
           EKGSQG
Sbjct: 301 EKGSQG 300

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BLAST of CsaV3_3G004810 vs. NCBI nr
Match: XP_022151304.1 (uncharacterized protein LOC111019268 [Momordica charantia])

HSP 1 Score: 420.6 bits (1080), Expect = 4.5e-114
Identity = 231/293 (78.84%), Postives = 246/293 (83.96%), Query Frame = 0


Query: 1   MFVTKLFSRSSRTILRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDKESTLYRSFFLQ 60
           MFVTK+FS + R I RSSLLSSA QSDK  H PIL N LH   NQ  DKES L+ SFFLQ
Sbjct: 1   MFVTKIFSGACRNICRSSLLSSASQSDKTTHLPILANHLHYRVNQPIDKESALHHSFFLQ 60

Query: 61  KHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDDLVKV 120
           K  LSTSASPETS+KENGNTVP NGGS                      DNLSMDDLVK+
Sbjct: 61  KFRLSTSASPETSDKENGNTVPSNGGSTPXXXXXXXXXXXXXXXXXXXXDNLSMDDLVKL 120

Query: 121 VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVAD 180
           V EKEELLK+KHKEIEQMQDKV+RTYAEMENVMART+REAENSKKFAIQNFAKSLLDVAD
Sbjct: 121 VTEKEELLKLKHKEIEQMQDKVVRTYAEMENVMARTRREAENSKKFAIQNFAKSLLDVAD 180

Query: 181 NLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNE 240
           NLGRASSVVK SFSKIDST+DSSGAVPLLKTL++GVEMTEKQLSEVLKK+GVE FDPTNE
Sbjct: 181 NLGRASSVVKESFSKIDSTDDSSGAVPLLKTLLEGVEMTEKQLSEVLKKFGVEKFDPTNE 240

Query: 241 PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENED 294
           PFDPH HNAVFQVPDGSK PGTVAAVLKKGYML++RVLRPAEVGVT+AVENED
Sbjct: 241 PFDPHMHNAVFQVPDGSKPPGTVAAVLKKGYMLYDRVLRPAEVGVTRAVENED 293

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BLAST of CsaV3_3G004810 vs. NCBI nr
Match: XP_022949288.1 (grpE protein homolog 2, mitochondrial-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 415.2 bits (1066), Expect = 1.9e-112
Identity = 229/296 (77.36%), Postives = 251/296 (84.80%), Query Frame = 0


Query: 1   MFVTKLFSRSSRTILRSSLLSSAPQSDKPIHF-PILTNRLHSLANQSKDKESTLYRSFFL 60
           M VTKLFSR+SR+I RSSLLSSA QS++  HF PIL+NR H LAN+S +KES LY SFFL
Sbjct: 1   MIVTKLFSRASRSICRSSLLSSASQSNQTAHFSPILSNRFHCLANESINKESALYNSFFL 60

Query: 61  QKHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDDLVK 120
            K GLST ASPET +KENG++V  NG S   AEPTAE+NG+T ESDS+SDDNL+MDDLVK
Sbjct: 61  HKFGLSTFASPETPDKENGDSVRSNGSSSAAAEPTAESNGQTKESDSESDDNLTMDDLVK 120

Query: 121 VVAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVA 180
           VVAEKEELLK+KHKEIEQMQDKV                    SKKFAIQNFAK LLDVA
Sbjct: 121 VVAEKEELLKLKHKEIEQMQDKVXXXXXXXXXXXXXXXXXXXXSKKFAIQNFAKGLLDVA 180

Query: 181 DNLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTN 240
           DNLGRASSVVK SFSKIDSTND++GAVPLLKTL++GVEMTEKQLSEVLKK+GVE+FDPTN
Sbjct: 181 DNLGRASSVVKESFSKIDSTNDTAGAVPLLKTLLEGVEMTEKQLSEVLKKFGVEIFDPTN 240

Query: 241 EPFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGA 296
           EPFDPHRHNAVFQVPDGSK PGTVAAVLKKGYMLHERVLRPAEVGVT+AVENEDGA
Sbjct: 241 EPFDPHRHNAVFQVPDGSKPPGTVAAVLKKGYMLHERVLRPAEVGVTRAVENEDGA 296

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BLAST of CsaV3_3G004810 vs. TAIR10
Match: AT5G55200.1 (Co-chaperone GrpE family protein)

HSP 1 Score: 266.9 bits (681), Expect = 1.5e-71
Identity = 163/309 (52.75%), Postives = 214/309 (69.26%), Query Frame = 0


Query: 1   MFVTKLFSRSSRTI-LRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDKESTLYRSF-- 60
           M V+++ SR SR+  LRSS   S+  + K    PI+ +R HSL + + +K   +  S   
Sbjct: 1   MLVSRVLSRVSRSAGLRSSF--SSVVTPKRNQIPIVASRFHSLVHGTPNKLVAVPVSLRN 60

Query: 61  -------FLQKHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDD 120
                   LQ+ G  +S+S E    E+   VP+ G +  N E      G+  +++ D DD
Sbjct: 61  HGTLDLNVLQRFGFFSSSSAEPKGNESNTEVPKTGETSENVEV-----GKATDAEIDFDD 120

Query: 121 NLSMDDLVKVVAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQN 180
            LS DDLVK+V+EKE+LLKV+ K+I +M+DK +RTYAE +N+M RT R AE++KKFA+QN
Sbjct: 121 -LSRDDLVKLVSEKEDLLKVQQKDIMEMKDKFLRTYAEQQNLMDRTNRNAESAKKFAVQN 180

Query: 181 FAKSLLDVADNLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKY 240
           FA SLLDVADNL RASSVVK SFSKID++ D +GA PLLK L++GVEMTEKQL+EV +K 
Sbjct: 181 FATSLLDVADNLERASSVVKESFSKIDTSKDLAGATPLLKNLLEGVEMTEKQLAEVFRKA 240

Query: 241 GVEMFDPTNEPFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVE 300
           G+   DP NEPF+P+RHNAVFQVPD SK  GT+A VLK GY L++RV+RPAEVGVT AVE
Sbjct: 241 GLVKEDPLNEPFNPNRHNAVFQVPDASKPKGTIAHVLKSGYSLYDRVIRPAEVGVTCAVE 300

[Close]

BLAST of CsaV3_3G004810 vs. TAIR10
Match: AT4G26780.1 (Co-chaperone GrpE family protein)

HSP 1 Score: 238.0 bits (606), Expect = 7.5e-63
Identity = 158/329 (48.02%), Postives = 201/329 (61.09%), Query Frame = 0


Query: 1   MFVTKLFSRSSRTI-LRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDK----ESTLYR 60
           M V ++ SR +R   +RSSL  SA         P+ ++R HSLA+    K    + ++  
Sbjct: 1   MLVLRILSRVTRNAGIRSSL--SAVTLPARNQTPVFSSRFHSLAHDFSHKLVPAQMSMMD 60

Query: 61  SFFLQKHGLSTSASPETSNKENGNTVPRNGGSKTNAE-PTAETNGRTGESDSDSDDNL-- 120
           SF LQ+   S+S SPE+  K+          SKT+ E PTAE N      DS+S D++  
Sbjct: 61  SFALQRFNFSSSTSPESDEKKT-----HTEASKTSEEKPTAEAN--QPGLDSESKDSVXX 120

Query: 121 ----------------------------SMDDLVKVVAEKEELLKVKHKEIEQMQDKVIR 180
                                           LVK+V                     +R
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVKLVXXXXXXXXXXXXXXXXXXXXXLR 180

Query: 181 TYAEMENVMARTKREAENSKKFAIQNFAKSLLDVADNLGRASSVVKGSFSKIDSTNDSSG 240
           TYAEMENVM RT+R+AEN+KK+A+QNFAKSLLDVADNLGRASSVVK SFSK+D++ DS+G
Sbjct: 181 TYAEMENVMDRTRRDAENTKKYAVQNFAKSLLDVADNLGRASSVVKESFSKLDTSEDSAG 240

Query: 241 AVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNEPFDPHRHNAVFQVPDGSKAPGTVA 294
           A PLLKTL++GVEMTEKQL+EV KK+G+E +DP NEPFDP+RHNAVFQVPD SK  GTVA
Sbjct: 241 AAPLLKTLLEGVEMTEKQLAEVFKKFGMEKYDPINEPFDPNRHNAVFQVPDASKPEGTVA 300

[Close]

BLAST of CsaV3_3G004810 vs. TAIR10
Match: AT5G17710.2 (Co-chaperone GrpE family protein)

HSP 1 Score: 55.8 bits (133), Expect = 5.3e-08
Identity = 60/220 (27.27%), Postives = 97/220 (44.09%), Query Frame = 0


Query: 88  KTNAEPTAETN-GRTGESDSDSDDNLSMDDLVKVVAEKEELLKVKHKEIEQMQDKVIRTY 147
           K+  E  A+ N G+  E ++      S++D   ++A+K   L     E+   +D++IR  
Sbjct: 117 KSYKEALADNNEGKIAEIEASLK---SIEDEKFLLADKVASLS---NELSVERDRLIRIS 176

Query: 148 AEMENVMARTKREAENSKKFAIQNFAKSLLDVADNLGRASSVVKGSFSKIDSTNDSSGAV 207
           A+ +N   RT+RE  N    A     ++LL V DN  RA S +K      +   +S  ++
Sbjct: 177 ADFDNFRKRTERERLNLVSNAQGEVVENLLAVLDNFERAKSQIKVETEGEEKVTNSYQSI 236

Query: 208 PLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNEPFDPHRHNAVFQVPDGSKAPGTVAAV 267
                         KQ  E+L   GV   +   + FDP  H A+ +        G V   
Sbjct: 237 -------------YKQFVEILGSLGVIHVETVGKQFDPMLHEAIMREDSAEYEEGIVLEE 296

Query: 268 LKKGYMLHERVLRPAEVGVTKAVENEDGATGDATEKGSQG 307
            +KG++L ER+LRP+ V V+     E     +  E  +QG
Sbjct: 297 YRKGFLLGERLLRPSMVKVSAGPGPEKPLEAEGEEATAQG 317

[Close]

BLAST of CsaV3_3G004810 vs. TAIR10
Match: AT1G36390.1 (Co-chaperone GrpE family protein)

HSP 1 Score: 51.6 bits (122), Expect = 1.0e-06
Identity = 41/159 (25.79%), Postives = 75/159 (47.17%), Query Frame = 0


Query: 134 EIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVADNLGRASSVVKGSF 193
           +I   ++  IR  A+ +N   +  ++  +++  A     KSLL + D+  +A   V    
Sbjct: 121 KIASEKEMKIRLQADFDNTRKKLDKDRLSTESNAKVQILKSLLPIIDSFEKAKLQV---- 180

Query: 194 SKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNEPFDPHRHNAVFQV 253
            ++D+  +       + T   G+    +Q  EVL+   V +     +PFDP  H A+ + 
Sbjct: 181 -RVDTDKEKK-----IDTSYQGI---YRQFVEVLRYLRVSVIATVGKPFDPLLHEAISRE 240

Query: 254 PDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENE 293
              +   G +   L KG++L +RVLRPA+V V+    N+
Sbjct: 241 ESEAVKAGIITEELNKGFVLGDRVLRPAKVKVSLGPVNK 266

[Close]

BLAST of CsaV3_3G004810 vs. Swiss-Prot
Match: sp|Q9FLP3|MGE1_ARATH (GrpE protein homolog 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=Mge1 PE=2 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 2.7e-70
Identity = 163/309 (52.75%), Postives = 214/309 (69.26%), Query Frame = 0


Query: 1   MFVTKLFSRSSRTI-LRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDKESTLYRSF-- 60
           M V+++ SR SR+  LRSS   S+  + K    PI+ +R HSL + + +K   +  S   
Sbjct: 1   MLVSRVLSRVSRSAGLRSSF--SSVVTPKRNQIPIVASRFHSLVHGTPNKLVAVPVSLRN 60

Query: 61  -------FLQKHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDD 120
                   LQ+ G  +S+S E    E+   VP+ G +  N E      G+  +++ D DD
Sbjct: 61  HGTLDLNVLQRFGFFSSSSAEPKGNESNTEVPKTGETSENVEV-----GKATDAEIDFDD 120

Query: 121 NLSMDDLVKVVAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQN 180
            LS DDLVK+V+EKE+LLKV+ K+I +M+DK +RTYAE +N+M RT R AE++KKFA+QN
Sbjct: 121 -LSRDDLVKLVSEKEDLLKVQQKDIMEMKDKFLRTYAEQQNLMDRTNRNAESAKKFAVQN 180

Query: 181 FAKSLLDVADNLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKY 240
           FA SLLDVADNL RASSVVK SFSKID++ D +GA PLLK L++GVEMTEKQL+EV +K 
Sbjct: 181 FATSLLDVADNLERASSVVKESFSKIDTSKDLAGATPLLKNLLEGVEMTEKQLAEVFRKA 240

Query: 241 GVEMFDPTNEPFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVE 300
           G+   DP NEPF+P+RHNAVFQVPD SK  GT+A VLK GY L++RV+RPAEVGVT AVE
Sbjct: 241 GLVKEDPLNEPFNPNRHNAVFQVPDASKPKGTIAHVLKSGYSLYDRVIRPAEVGVTCAVE 300

[Close]

BLAST of CsaV3_3G004810 vs. Swiss-Prot
Match: sp|Q8LB47|MGE2_ARATH (GrpE protein homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=Mge2 PE=1 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.4e-61
Identity = 158/329 (48.02%), Postives = 201/329 (61.09%), Query Frame = 0


Query: 1   MFVTKLFSRSSRTI-LRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDK----ESTLYR 60
           M V ++ SR +R   +RSSL  SA         P+ ++R HSLA+    K    + ++  
Sbjct: 1   MLVLRILSRVTRNAGIRSSL--SAVTLPARNQTPVFSSRFHSLAHDFSHKLVPAQMSMMD 60

Query: 61  SFFLQKHGLSTSASPETSNKENGNTVPRNGGSKTNAE-PTAETNGRTGESDSDSDDNL-- 120
           SF LQ+   S+S SPE+  K+          SKT+ E PTAE N      DS+S D++  
Sbjct: 61  SFALQRFNFSSSTSPESDEKKT-----HTEASKTSEEKPTAEAN--QPGLDSESKDSVXX 120

Query: 121 ----------------------------SMDDLVKVVAEKEELLKVKHKEIEQMQDKVIR 180
                                           LVK+V                     +R
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVKLVXXXXXXXXXXXXXXXXXXXXXLR 180

Query: 181 TYAEMENVMARTKREAENSKKFAIQNFAKSLLDVADNLGRASSVVKGSFSKIDSTNDSSG 240
           TYAEMENVM RT+R+AEN+KK+A+QNFAKSLLDVADNLGRASSVVK SFSK+D++ DS+G
Sbjct: 181 TYAEMENVMDRTRRDAENTKKYAVQNFAKSLLDVADNLGRASSVVKESFSKLDTSEDSAG 240

Query: 241 AVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNEPFDPHRHNAVFQVPDGSKAPGTVA 294
           A PLLKTL++GVEMTEKQL+EV KK+G+E +DP NEPFDP+RHNAVFQVPD SK  GTVA
Sbjct: 241 AAPLLKTLLEGVEMTEKQLAEVFKKFGMEKYDPINEPFDPNRHNAVFQVPDASKPEGTVA 300

[Close]

BLAST of CsaV3_3G004810 vs. Swiss-Prot
Match: sp|Q3SW78|GRPE_NITWN (Protein GrpE OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 / NCIMB 11846 / Nb-255) OX=323098 GN=grpE PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.6e-30
Identity = 72/164 (43.90%), Postives = 106/164 (64.63%), Query Frame = 0


Query: 124 KEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVADNLG 183
           +++ L   +K++ + +D+ +RT AEMEN+  RT RE  +++ + I  FA+ +L++ADNL 
Sbjct: 33  EDDALDALNKQLAEAKDRTLRTLAEMENLRKRTAREVSDARTYGISGFARDVLEIADNLQ 92

Query: 184 RASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNEPFD 243
           RA   V          +  +   P LK LI+GVE+TE+ L   L+K+GV+ FDP  E FD
Sbjct: 93  RALDAV--------PADARAAPDPGLKALIEGVELTERSLHNALEKHGVKKFDPAGEKFD 152

Query: 244 PHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTK 288
           P+ H A+++VPD S   GTVA V++ GYM+ ERVLRPA VGV K
Sbjct: 153 PNVHQAMYEVPDPSIPVGTVAQVIQAGYMIGERVLRPALVGVAK 188

[Close]

BLAST of CsaV3_3G004810 vs. Swiss-Prot
Match: sp|A4YJR1|GRPE_BRASO (Protein GrpE OS=Bradyrhizobium sp. (strain ORS 278) OX=114615 GN=grpE PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.2e-28
Identity = 72/155 (46.45%), Postives = 101/155 (65.16%), Query Frame = 0


Query: 133 KEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVADNLGRASSVVKGS 192
           KE  + +DK++RT AEMEN+  RT RE  +++ + I  FA+ +LD+ADNL RA   V   
Sbjct: 42  KEAAEARDKMLRTLAEMENLRKRTAREVADARMYGITGFARDVLDIADNLQRALDAVPAE 101

Query: 193 FSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNEPFDPHRHNAVFQ 252
                  N  +G    LK+LI+GVE+TE+ L   L+K GV+ FDPT + FDP+   A+++
Sbjct: 102 ----TRANADAG----LKSLIEGVELTERSLLNTLEKNGVKKFDPTGQKFDPNFQQAMYE 161

Query: 253 VPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTK 288
           VPD S   GTV  V++ G+M+ ERVLRPA VGV+K
Sbjct: 162 VPDPSVPSGTVVQVVQAGFMIGERVLRPALVGVSK 188

[Close]

BLAST of CsaV3_3G004810 vs. Swiss-Prot
Match: sp|Q07US4|GRPE_RHOP5 (Protein GrpE OS=Rhodopseudomonas palustris (strain BisA53) OX=316055 GN=grpE PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.2e-28
Identity = 71/155 (45.81%), Postives = 100/155 (64.52%), Query Frame = 0


Query: 133 KEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVADNLGRASSVVKGS 192
           KE  + +DK++RT AEMEN+  RT RE  +++ + +  FA+ +L++ADNL RA   V   
Sbjct: 42  KEAAEARDKMLRTLAEMENLRKRTTREVADARIYGVTAFARDVLEIADNLQRALDAV--- 101

Query: 193 FSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNEPFDPHRHNAVFQ 252
                     + A P LK LIDGVE+TE+ L   L+K GV+ FDP+ + FDP+   A+++
Sbjct: 102 -----PAEARANAEPGLKALIDGVELTERSLINALEKNGVKKFDPSGQKFDPNFQQAMYE 161

Query: 253 VPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTK 288
           VPD S   GTV  V++ G+ML ERVLRPA VGV+K
Sbjct: 162 VPDASVPAGTVVQVVQAGFMLGERVLRPALVGVSK 188

[Close]

BLAST of CsaV3_3G004810 vs. TrEMBL
Match: tr|A0A0A0L683|A0A0A0L683_CUCSA (GrpE protein homolog OS=Cucumis sativus OX=3659 GN=Csa_3G073880 PE=3 SV=1)

HSP 1 Score: 575.1 bits (1481), Expect = 9.5e-161
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 1   MFVTKLFSRSSRTILRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDKESTLYRSFFLQ 60
           MFVTKLFSRSSRTILRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDKESTLYRSFFLQ
Sbjct: 1   MFVTKLFSRSSRTILRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDKESTLYRSFFLQ 60

Query: 61  KHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDDLVKV 120
           KHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDDLVKV
Sbjct: 61  KHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDDLVKV 120

Query: 121 VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVAD 180
           VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVAD
Sbjct: 121 VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVAD 180

Query: 181 NLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNE 240
           NLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNE
Sbjct: 181 NLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNE 240

Query: 241 PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT 300
           PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT
Sbjct: 241 PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT 300

Query: 301 EKGSQG 307
           EKGSQG
Sbjct: 301 EKGSQG 306

[Close]

BLAST of CsaV3_3G004810 vs. TrEMBL
Match: tr|A0A1S3BKR7|A0A1S3BKR7_CUCME (GrpE protein homolog OS=Cucumis melo OX=3656 GN=LOC103491087 PE=3 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 3.2e-148
Identity = 285/306 (93.14%), Postives = 294/306 (96.08%), Query Frame = 0


Query: 1   MFVTKLFSRSSRTILRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDKESTLYRSFFLQ 60
           MFVTKLFSRSSRTILRSSLLSSA QSDKPIH PIL NR HSLANQS  KESTL+RSFFLQ
Sbjct: 1   MFVTKLFSRSSRTILRSSLLSSAAQSDKPIHLPILANRFHSLANQSNHKESTLHRSFFLQ 60

Query: 61  KHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDDLVKV 120
           K GLSTSASPETSNKENGN+ P NG SKT+AEPTAETNGRT ESDS+SDDNLS+DDLVKV
Sbjct: 61  KFGLSTSASPETSNKENGNSAPSNGSSKTDAEPTAETNGRTRESDSESDDNLSIDDLVKV 120

Query: 121 VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVAD 180
           VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFA+QNFAKSLLDVAD
Sbjct: 121 VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAVQNFAKSLLDVAD 180

Query: 181 NLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNE 240
           NLGRASSVVK SFSKIDSTNDS+GAVPLLKTL++GVEMTEKQLSEVLKKYGVEMFDPTNE
Sbjct: 181 NLGRASSVVKESFSKIDSTNDSAGAVPLLKTLLEGVEMTEKQLSEVLKKYGVEMFDPTNE 240

Query: 241 PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT 300
           PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT
Sbjct: 241 PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT 300

Query: 301 EKGSQG 307
           EKGSQG
Sbjct: 301 EKGSQG 306

[Close]

BLAST of CsaV3_3G004810 vs. TrEMBL
Match: tr|A0A1S3BLD9|A0A1S3BLD9_CUCME (GrpE protein homolog OS=Cucumis melo OX=3656 GN=LOC103491087 PE=3 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 4.7e-120
Identity = 249/306 (81.37%), Postives = 254/306 (83.01%), Query Frame = 0


Query: 1   MFVTKLFSRSSRTILRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDKESTLYRSFFLQ 60
           MFVTKLFSRSSRTILRSSLLSSA QSDKPIH PIL NR HSLANQS  KESTL+RSFFLQ
Sbjct: 1   MFVTKLFSRSSRTILRSSLLSSAAQSDKPIHLPILANRFHSLANQSNHKESTLHRSFFLQ 60

Query: 61  KHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDDLVKV 120
           K GLSTSASPET                                            LVKV
Sbjct: 61  KFGLSTSASPET------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVKV 120

Query: 121 VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVAD 180
           VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFA+QNFAKSLLDVAD
Sbjct: 121 VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAVQNFAKSLLDVAD 180

Query: 181 NLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNE 240
           NLGRASSVVK SFSKIDSTNDS+GAVPLLKTL++GVEMTEKQLSEVLKKYGVEMFDPTNE
Sbjct: 181 NLGRASSVVKESFSKIDSTNDSAGAVPLLKTLLEGVEMTEKQLSEVLKKYGVEMFDPTNE 240

Query: 241 PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT 300
           PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT
Sbjct: 241 PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT 300

Query: 301 EKGSQG 307
           EKGSQG
Sbjct: 301 EKGSQG 300

[Close]

BLAST of CsaV3_3G004810 vs. TrEMBL
Match: tr|A0A218X9G1|A0A218X9G1_PUNGR (GrpE protein homolog OS=Punica granatum OX=22663 GN=CDL15_Pgr007354 PE=3 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 8.2e-88
Identity = 185/297 (62.29%), Postives = 230/297 (77.44%), Query Frame = 0


Query: 1   MFVTKLFSRSSRTILRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDKESTL----YRS 60
           M  +++ +R SR + RS+LL S  Q  +   F +L+ + HS ++ S  +   L    + S
Sbjct: 1   MSASRVLTRVSRGLSRSALLVSPAQKQR---FSVLSGQFHSSSHDSPVQAHVLNQFPHSS 60

Query: 61  FFLQKHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDD 120
             LQ+ G+S+SA+PE   KE GNT  +     T      +   + G+SDS+S+D LSM+D
Sbjct: 61  SLLQRFGISSSATPE-PEKEQGNTAEKESAEATKGGEETKAPDQVGKSDSESEDELSMED 120

Query: 121 LVKVVAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLL 180
           LVK+VAEKEELLK KHK+IE+MQDKV+R+YAEMENVM RT+REAEN+KK+A+Q+FAKSLL
Sbjct: 121 LVKLVAEKEELLKAKHKQIEEMQDKVLRSYAEMENVMDRTRREAENAKKYAVQSFAKSLL 180

Query: 181 DVADNLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFD 240
           DVADNLGRASSVVK  FSKID++ D+SGAVPLLKTL++GVEMTEKQL EV KK G+E +D
Sbjct: 181 DVADNLGRASSVVKEGFSKIDTSKDASGAVPLLKTLLEGVEMTEKQLLEVFKKSGIEKYD 240

Query: 241 PTNEPFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENED 294
           PTNEPFDPHRHNAVFQVPDGSK PGTVAAVLK GYML++RVLRPAEVGVTK VEN +
Sbjct: 241 PTNEPFDPHRHNAVFQVPDGSKPPGTVAAVLKPGYMLYDRVLRPAEVGVTKEVENNN 293

[Close]

BLAST of CsaV3_3G004810 vs. TrEMBL
Match: tr|A0A2I4EZ52|A0A2I4EZ52_9ROSI (GrpE protein homolog OS=Juglans regia OX=51240 GN=LOC108994051 PE=3 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 9.0e-87
Identity = 198/314 (63.06%), Postives = 243/314 (77.39%), Query Frame = 0


Query: 1   MFVTKLFSRSSRTIL-RSS-LLSSAPQSDKPIHFPILTNRLHSLANQSKD-----KESTL 60
           M V+++ SR  R I+ RSS LL S PQ+ +     IL   LHSL  +S +     + S L
Sbjct: 1   MVVSRVLSRVPRRIVPRSSLLLLSVPQNQQS---AILCGHLHSLVRESPNALVPSQVSFL 60

Query: 61  YRS----FFLQKHGLSTSASPETSNKENGNTVPRNGGSKTNAEPT-----AETNGRTGES 120
           + S       Q+ G+S+SASPE ++KENG+    NG S+ NAEP+     A+ + +  +S
Sbjct: 61  HHSAPHLSIFQRFGVSSSASPEPTDKENGSNGENNGASR-NAEPSNTSGDAKLSNQAEDS 120

Query: 121 DSDSDDNLSMDDLVKVVAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSK 180
           DS+S + LSMDDLVK+VAEKEELLK+KHKEIE+MQDKV+R+YAEMENVM RT+REAENSK
Sbjct: 121 DSESGEELSMDDLVKLVAEKEELLKLKHKEIEKMQDKVLRSYAEMENVMGRTRREAENSK 180

Query: 181 KFAIQNFAKSLLDVADNLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLS 240
           KFAIQ+FAKSLLDVADNL RAS  VK SF+K+D++ DS+GA+PLLKTL++GVEMTEKQL 
Sbjct: 181 KFAIQSFAKSLLDVADNLERASLEVKKSFAKLDTSTDSAGALPLLKTLLEGVEMTEKQLL 240

Query: 241 EVLKKYGVEMFDPTNEPFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVG 297
           EV KKYGVE FDP +EPFDPHRHNAVFQ+PDGSK PGTVAAVLK GY+LH+RV+RPAEVG
Sbjct: 241 EVFKKYGVERFDPMDEPFDPHRHNAVFQLPDGSKPPGTVAAVLKSGYLLHDRVIRPAEVG 300

The following BLAST results are available for this feature:

BLAST of CsaV3_3G004810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149344.1	1.4e-160	100.00	PREDICTED: grpE protein homolog, mitochondrial [Cucumis sativus] >KGN56097.1 hyp...	[more]
XP_008449136.1	4.8e-148	93.14	PREDICTED: protein GrpE-like isoform X1 [Cucumis melo]	[more]
XP_008449137.1	7.2e-120	81.37	PREDICTED: protein GrpE-like isoform X2 [Cucumis melo]	[more]
XP_022151304.1	4.5e-114	78.84	uncharacterized protein LOC111019268 [Momordica charantia]	[more]
XP_022949288.1	1.9e-112	77.36	grpE protein homolog 2, mitochondrial-like isoform X3 [Cucurbita moschata]	[more]

BLAST of CsaV3_3G004810 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G55200.1	1.5e-71	52.75	Co-chaperone GrpE family protein	[more]
AT4G26780.1	7.5e-63	48.02	Co-chaperone GrpE family protein	[more]
AT5G17710.2	5.3e-08	27.27	Co-chaperone GrpE family protein	[more]
AT1G36390.1	1.0e-06	25.79	Co-chaperone GrpE family protein	[more]

BLAST of CsaV3_3G004810 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FLP3\|MGE1_ARATH	2.7e-70	52.75	GrpE protein homolog 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=Mge1 PE...	[more]
sp\|Q8LB47\|MGE2_ARATH	1.4e-61	48.02	GrpE protein homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=Mge2 PE...	[more]
sp\|Q3SW78\|GRPE_NITWN	3.6e-30	43.90	Protein GrpE OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 10...	[more]
sp\|A4YJR1\|GRPE_BRASO	1.2e-28	46.45	Protein GrpE OS=Bradyrhizobium sp. (strain ORS 278) OX=114615 GN=grpE PE=3 SV=1	[more]
sp\|Q07US4\|GRPE_RHOP5	1.2e-28	45.81	Protein GrpE OS=Rhodopseudomonas palustris (strain BisA53) OX=316055 GN=grpE PE=...	[more]

BLAST of CsaV3_3G004810 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L683\|A0A0A0L683_CUCSA	9.5e-161	100.00	GrpE protein homolog OS=Cucumis sativus OX=3659 GN=Csa_3G073880 PE=3 SV=1	[more]
tr\|A0A1S3BKR7\|A0A1S3BKR7_CUCME	3.2e-148	93.14	GrpE protein homolog OS=Cucumis melo OX=3656 GN=LOC103491087 PE=3 SV=1	[more]
tr\|A0A1S3BLD9\|A0A1S3BLD9_CUCME	4.7e-120	81.37	GrpE protein homolog OS=Cucumis melo OX=3656 GN=LOC103491087 PE=3 SV=1	[more]
tr\|A0A218X9G1\|A0A218X9G1_PUNGR	8.2e-88	62.29	GrpE protein homolog OS=Punica granatum OX=22663 GN=CDL15_Pgr007354 PE=3 SV=1	[more]
tr\|A0A2I4EZ52\|A0A2I4EZ52_9ROSI	9.0e-87	63.06	GrpE protein homolog OS=Juglans regia OX=51240 GN=LOC108994051 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0051087	chaperone binding
GO:0000774	adenyl-nucleotide exchange factor activity
GO:0042803	protein homodimerization activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding

Vocabulary: **INTERPRO**
Term	Definition
IPR013805	GrpE_coiled_coil
IPR009012	GrpE_head
IPR000740	GrpE

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0050790	regulation of catalytic activity
biological_process	GO:0016573	histone acetylation
biological_process	GO:0006357	regulation of transcription from RNA polymerase II promoter
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005759	mitochondrial matrix
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0044429	mitochondrial part
molecular_function	GO:0000774	adenyl-nucleotide exchange factor activity
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0042803	protein homodimerization activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G004810.1	CsaV3_3G004810.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 121..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..112
None	No IPR available	PANTHER	PTHR21237:SF28	SUBFAMILY NOT NAMED	coord: 48..291
IPR000740	GrpE nucleotide exchange factor	PRINTS	PR00773	GRPEPROTEIN	coord: 239..254 score: 47.07 coord: 143..159 score: 38.05 coord: 266..285 score: 53.12
IPR000740	GrpE nucleotide exchange factor	PFAM	PF01025	GrpE	coord: 121..287 e-value: 1.6E-49 score: 167.7
IPR000740	GrpE nucleotide exchange factor	PANTHER	PTHR21237	GRPE PROTEIN	coord: 48..291
IPR000740	GrpE nucleotide exchange factor	PROSITE	PS01071	GRPE	coord: 242..285
IPR000740	GrpE nucleotide exchange factor	HAMAP	MF_01151	GrpE	coord: 73..287 score: 18.738
IPR000740	GrpE nucleotide exchange factor	CDD	cd00446	GrpE	coord: 136..285 e-value: 1.83754E-59 score: 188.099
IPR009012	GrpE nucleotide exchange factor, head	GENE3D	G3DSA:2.30.22.10		coord: 231..287 e-value: 3.9E-21 score: 76.6
IPR009012	GrpE nucleotide exchange factor, head	SUPERFAMILY	SSF51064	Head domain of nucleotide exchange factor GrpE	coord: 232..287
IPR013805	GrpE nucleotide exchange factor, coiled-coil	GENE3D	G3DSA:3.90.20.20		coord: 114..230 e-value: 7.1E-24 score: 85.5
IPR013805	GrpE nucleotide exchange factor, coiled-coil	SUPERFAMILY	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE	coord: 122..231

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_3G004810	CSPI03G04820	Wild cucumber (PI 183967)	cpicucB144
CsaV3_3G004810	Cucsa.042750	Cucumber (Gy14) v1	cgycucB017
CsaV3_3G004810	CmaCh16G009110	Cucurbita maxima (Rimu)	cmacucB0381
CsaV3_3G004810	CmaCh06G008680	Cucurbita maxima (Rimu)	cmacucB0969
CsaV3_3G004810	CmaCh09G009680	Cucurbita maxima (Rimu)	cmacucB0026
CsaV3_3G004810	CmoCh09G009690	Cucurbita moschata (Rifu)	cmocucB0014
CsaV3_3G004810	CmoCh06G008930	Cucurbita moschata (Rifu)	cmocucB0957
CsaV3_3G004810	CmoCh16G009460	Cucurbita moschata (Rifu)	cmocucB0378
CsaV3_3G004810	Cp4.1LG14g07350	Cucurbita pepo (Zucchini)	cpecucB0256
CsaV3_3G004810	Cp4.1LG06g08790	Cucurbita pepo (Zucchini)	cpecucB0968
CsaV3_3G004810	Cp4.1LG00g02060	Cucurbita pepo (Zucchini)	cpecucB0012
CsaV3_3G004810	CsGy3G004880	Cucumber (Gy14) v2	cgybcucB117
CsaV3_3G004810	Carg25348	Silver-seed gourd	carcucB0523
CsaV3_3G004810	Carg12837	Silver-seed gourd	carcucB0943
CsaV3_3G004810	Cla005340	Watermelon (97103) v1	cucwmB204
CsaV3_3G004810	MELO3C014179	Melon (DHL92) v3.5.1	cucmeB246
CsaV3_3G004810	ClCG10G005130	Watermelon (Charleston Gray)	cucwcgB194
CsaV3_3G004810	Lsi05G005680	Bottle gourd (USVL1VR-Ls)	cuclsiB217
CsaV3_3G004810	MELO3C014179.2	Melon (DHL92) v3.6.1	cucmedB231
CsaV3_3G004810	Cla97C10G189370	Watermelon (97103) v2	cucwmbB182
CsaV3_3G004810	Bhi11G000443	Wax gourd	cucwgoB223

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_3G004810	Watermelon (Charleston Gray)	cucwcgB219