CmaCh16G009110 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh16G009110
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Nucleotide exchange factor Mge1
Location	Cma_Chr16 : 6816861 .. 6820509 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCAAATTCTCTCTCCAATGCTTCTCTTAATCTTTCCTCTTTCCCTCTTCTTTGCTTTGTAATAAATAGCTTTCAATCTGTTTATCCTTTTTCCAGTTTTCTTCACCTTCATTGTTAGCTATGTTCGTCTCCAAGCTTCTCTCTCGCGCCGCCTCCCGCACCATTTTCCAGGGCTCGCTGCTCTCGTCGGCCTCGCAATCCCATCAAACCATACGCTTTCCACTTCTCCTCACAAATCGCTTACACTATCTTGCAAACGAATCATCCAACAAGGTCCGATTTCAGTGCCTGTCTGTTACTTGCTTTTGCTTTCTGCTTTCTGCTTTCTGCTACAGGGGTTTAGCTACGGGTTTCGGTTTTTCTCAAAATTTCCTACCTAACAGGAACGTAGTTGTCCGATTGTCTCCCCTTTTTATGTGAGTTTAGAATGATTTTGGTAGCATTTTTATTATATGCACTTGGTAATCCGATGATCTTCCCTCTTTTTATGAGTTTTAGAATGATTTTGGTAGCATTTTTATTATATGCATTTGGTAATCCGATTGTCTTCCCTTTTATTATGAGTTTTAGAATGATTTTGGTAGCATTTTTATTATATGCATTTGGTAATCCGATTGTCTTCCCTTTTATTATGAGTTTTAGAATGATTTTGGTAGCATTTTTATTATATGCATTTGGTAATCCGATTGTCTTCCCTTTTATTATGAGTTTTAGAATGATTTTGGTAGCATTTTTATTATATGCATTTGGTAATCCGATTGTCTTCCCTTTTTTTGAGTTTTAGAATGATTTTGGTAGCATTTTTATCATATTATTTTATTATATGCATTTGGACCTCCCCTCCATCTTAGTTCTATCGCTGTGTTTCTTGGATTTATTATTATTTATGATATTTGGTGTATTTTTAGTATATGTTCTTTACTTGGAGAGTGTTTAAAAGTCGTGCAGCTTGGAACTAGTTTACCTTTGTCGTTATTTGGAGATCATTGGAATTTATTGCTTAGTTTTTTGGTTAATTGTTGGATCTTCGTATATTACTCAAATTAGAGGACGTTCAGTTGCAGTTTTATTCTTTTTCCGTGCAGGAATCAGCATTACATCATTCATTTTTCCTTCAAAAATTTGGATTATCAACATCTGCATCTCATGAGACTTCTAATAAGGAAAATGGTAATACGGTACCAAGTAGTGGCGGCTCTGCAACTGCTGCAGAGCCGACGGCTGAAACTAATGGTCAAACCAGAGAATCAGGTTTAATATCCGGATGTTGGTTTTCAATGCTTGCCTTTAATGGAGAAGTAGTAACAAACTCTGTTTTCTGATTCAGATTCCGAGAGCGATGACAATCTTTCCATGGATGATCTGGTGAAAGTTGTAGCTGAGAAGGAAGAGCTTTTGAAGTTAAAGCACAAAGAGATTGAAGAAATGCAAGATAAAGTTATTCGCACTTATGCCGAGATGGAGAATGTAATGGCCAGGACGAGGCGTGAAGCTGAAAATTCAAAGAAGTTTGCTATACAGGTCTTAATTGGCCTGTTTCTTATCTTTGATATTTGGGGCAATACATTATTATTCACTTGCAAAATTCTCTCCTAACATCTTTTATTTGTATGTAATAGAATTTTGCAAAGAGTTTACTGGACGTTGCAGACAATCTAGGACGAGCTTCATCTGTAGTTAAGGAACGTTTTTCAAAGATTGATTCTAGTAATGGCTCTTCTGAGGCAGTACTCTTATTGAAAACCCTTCTTGAAGGCGTTGAAATGACTGAGAAACAGCTGTCTGAGGTAACGTATCTCGTGTATAAAATGTTCCTGAGGTTTGCAGTTCATTTGAATCTATTTCATCATAAAAATAATTGGTTGATTTTAGTGGTCAAGTTCCTTGAATTTAACAAAGGAAGAACTCACGTCACTTGAACTAAATTATGTCGTTTGCAGGCGTTAAAAAAGTTTGGAGTTGAAATTTTTGATCCTACAAATGAGCCATTTGATCCACATAAGCACAATGCAGTTTTTCAAGTTCCAGATGGCTCTAAGCCTCCTGGTACCGTTGCAGCTGTATTGAAGGTATGTCTCATGGTCATGATTATTGTTTTCTGTGTGCTTTTTACTTTTTTCTATCATTATATTTCAAATTCTTCATATGCATTTAAGTTGCCTATGAATATTATACGATGATGAATTGTAGGCAAGATAATCTTTTTATTCACAAAGGAAATTGATAAAAACGGGAACTCTGAACATTTTCTTTGACCAATTACTTACAAACAAGAGCCATTTGCTTCAAGGATTTTTTTGTAGCACTAGTACATGTGGATGGAAAATCTTCTGAGATACTCATGGTAGATATGGAAGTCTTTATTTGTTTCTAGAATTTTGAGAATTTGGTGTAATCATTAAGGGCAGACTTTGAGTAAAAAGAAAAGGCTATGAACTCAAATGTTTTAAGGGATATTTAGCTCACAATTATATAAGCATGGATTTGTATAGCATAATTTTGGGGAGTCTAAGCTCGTGTCTTCATAGTTTTGGTTGTATAGAAGAACGAATCGCCTAACCAAGAGTATATGTTGCTTCTATTTGGTTTATGAGTTTATGACGTGTGAAAATAATTGGGTAGCCTGAGAATACTGTTTACACATGAACAACTGAAATCGTATAAAGAATTTTTATATAAGAGAATATATATTATGAACAATATGATAATGGAGTATTTAAGAAATTAATGTTTTTAGGAGATTGTTCAGAAAAATGAGGGTGTTTGAAGAATTCTTAATTCTTTCATAAAGGGAGCATGGCCTTTATTTGAACAGCTTATTTCCAAGGAGTGCTGCTCAAATATGATAATTGCAAAAGCCTATCTGTTAATTGTGTTGTTTATGTCAATAGAAAGGATACATGCTTTACGAGCGAGTACTTCGACCTGCCGAAGTTGGTGTTACTAAAGCCATGGATAATGAATGAGGACGGTGCAGCCGATAATGCAACCGAGAAGGTAACTCAAGGTTGAATGAAGGGTTGGAAAGACTGGATAGTTTCCTCTGAAAAAAGGTTTTGCTATACGGACTGTTGTTTGGTAGAGAAGATATATCTAATCTGTAGATGCACAGGGAAAGAAAAACAATTCATTGCTTTTGGATGAACATTTGATTTTGTCATGTATTTAGAGAGAGAAATGAGGTATTTTCATGTGTAAACATGTTCGTGAGGCGTTTTTTGTTGTTGAAAAGTGTTACCAAATGGCTTTTTTCAAGGATGAACCAGAAACAGAATGATGCTATATTTTAACAGCCGGGGCAATGAATATAAAGAGAAGGCATGCTTTCAAATTAACCTTGTATGCCTGTTAAGTAACGAGTTCTCGATGTTTCTACGCACTACAACTCGATGACAACAGCAACAAAAATATTCGTTTTGGGCAATCTACTTCTGGTCGGAGTATCCATGTTCGTAGGAGGTTATACTTGTGGGTTGTTGTGTTCAGGTGGTCGTCCTTCATCATGCACTTTTGAGTTCTGGTTTGGCTTCGATGTCAAATGAAAGTGTTATCTCAAAGACACGATCAAAAGGAAAATTATTTATTTTCAAAATGTTGTCTCATAAAATCAAAAGAATTTAAAGTTTTGTGGTGAGACAGGAGGTTCAAG

mRNA sequence

TCCAAATTCTCTCTCCAATGCTTCTCTTAATCTTTCCTCTTTCCCTCTTCTTTGCTTTGTAATAAATAGCTTTCAATCTGTTTATCCTTTTTCCAGTTTTCTTCACCTTCATTGTTAGCTATGTTCGTCTCCAAGCTTCTCTCTCGCGCCGCCTCCCGCACCATTTTCCAGGGCTCGCTGCTCTCGTCGGCCTCGCAATCCCATCAAACCATACGCTTTCCACTTCTCCTCACAAATCGCTTACACTATCTTGCAAACGAATCATCCAACAAGGAATCAGCATTACATCATTCATTTTTCCTTCAAAAATTTGGATTATCAACATCTGCATCTCATGAGACTTCTAATAAGGAAAATGGTAATACGGTACCAAGTAGTGGCGGCTCTGCAACTGCTGCAGAGCCGACGGCTGAAACTAATGGTCAAACCAGAGAATCAGATTCCGAGAGCGATGACAATCTTTCCATGGATGATCTGGTGAAAGTTGTAGCTGAGAAGGAAGAGCTTTTGAAGTTAAAGCACAAAGAGATTGAAGAAATGCAAGATAAAGTTATTCGCACTTATGCCGAGATGGAGAATGTAATGGCCAGGACGAGGCGTGAAGCTGAAAATTCAAAGAAGTTTGCTATACAGAATTTTGCAAAGAGTTTACTGGACGTTGCAGACAATCTAGGACGAGCTTCATCTGTAGTTAAGGAACGTTTTTCAAAGATTGATTCTAGTAATGGCTCTTCTGAGGCAGTACTCTTATTGAAAACCCTTCTTGAAGGCGTTGAAATGACTGAGAAACAGCTGTCTGAGGCGTTAAAAAAGTTTGGAGTTGAAATTTTTGATCCTACAAATGAGCCATTTGATCCACATAAGCACAATGCAGTTTTTCAAGTTCCAGATGGCTCTAAGCCTCCTGGTACCGTTGCAGCTGTATTGAAGAAAGGATACATGCTTTACGAGCGAGTACTTCGACCTGCCGAAGTTGGTGTTACTAAAGCCATGGATAATGAATGAGGACGGTGCAGCCGATAATGCAACCGAGAAGGTAACTCAAGGTTGAATGAAGGGTTGGAAAGACTGGATAGTTTCCTCTGAAAAAAGGTTTTGCTATACGGACTGTTGTTTGGTAGAGAAGATATATCTAATCTGTAGATGCACAGGGAAAGAAAAACAATTCATTGCTTTTGGATGAACATTTGATTTTGTCATGTATTTAGAGAGAGAAATGAGGTATTTTCATGTGTAAACATGTTCGTGAGGCGTTTTTTGTTGTTGAAAAGTGTTACCAAATGGCTTTTTTCAAGGATGAACCAGAAACAGAATGATGCTATATTTTAACAGCCGGGGCAATGAATATAAAGAGAAGGCATGCTTTCAAATTAACCTTGTATGCCTGTTAAGTAACGAGTTCTCGATGTTTCTACGCACTACAACTCGATGACAACAGCAACAAAAATATTCGTTTTGGGCAATCTACTTCTGGTCGGAGTATCCATGTTCGTAGGAGGTTATACTTGTGGGTTGTTGTGTTCAGGTGGTCGTCCTTCATCATGCACTTTTGAGTTCTGGTTTGGCTTCGATGTCAAATGAAAGTGTTATCTCAAAGACACGATCAAAAGGAAAATTATTTATTTTCAAAATGTTGTCTCATAAAATCAAAAGAATTTAAAGTTTTGTGGTGAGACAGGAGGTTCAAG

Coding sequence (CDS)

ATGTTCGTCTCCAAGCTTCTCTCTCGCGCCGCCTCCCGCACCATTTTCCAGGGCTCGCTGCTCTCGTCGGCCTCGCAATCCCATCAAACCATACGCTTTCCACTTCTCCTCACAAATCGCTTACACTATCTTGCAAACGAATCATCCAACAAGGAATCAGCATTACATCATTCATTTTTCCTTCAAAAATTTGGATTATCAACATCTGCATCTCATGAGACTTCTAATAAGGAAAATGGTAATACGGTACCAAGTAGTGGCGGCTCTGCAACTGCTGCAGAGCCGACGGCTGAAACTAATGGTCAAACCAGAGAATCAGATTCCGAGAGCGATGACAATCTTTCCATGGATGATCTGGTGAAAGTTGTAGCTGAGAAGGAAGAGCTTTTGAAGTTAAAGCACAAAGAGATTGAAGAAATGCAAGATAAAGTTATTCGCACTTATGCCGAGATGGAGAATGTAATGGCCAGGACGAGGCGTGAAGCTGAAAATTCAAAGAAGTTTGCTATACAGAATTTTGCAAAGAGTTTACTGGACGTTGCAGACAATCTAGGACGAGCTTCATCTGTAGTTAAGGAACGTTTTTCAAAGATTGATTCTAGTAATGGCTCTTCTGAGGCAGTACTCTTATTGAAAACCCTTCTTGAAGGCGTTGAAATGACTGAGAAACAGCTGTCTGAGGCGTTAAAAAAGTTTGGAGTTGAAATTTTTGATCCTACAAATGAGCCATTTGATCCACATAAGCACAATGCAGTTTTTCAAGTTCCAGATGGCTCTAAGCCTCCTGGTACCGTTGCAGCTGTATTGAAGAAAGGATACATGCTTTACGAGCGAGTACTTCGACCTGCCGAAGTTGGTGTTACTAAAGCCATGGATAATGAATGA

Protein sequence

MFVSKLLSRAASRTIFQGSLLSSASQSHQTIRFPLLLTNRLHYLANESSNKESALHHSFFLQKFGLSTSASHETSNKENGNTVPSSGGSATAAEPTAETNGQTRESDSESDDNLSMDDLVKVVAEKEELLKLKHKEIEEMQDKVIRTYAEMENVMARTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKERFSKIDSSNGSSEAVLLLKTLLEGVEMTEKQLSEALKKFGVEIFDPTNEPFDPHKHNAVFQVPDGSKPPGTVAAVLKKGYMLYERVLRPAEVGVTKAMDNE

Homology

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BLAST of CmaCh16G009110 vs. Swiss-Prot
Match: GRPE_OLICO (Protein GrpE OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=grpE PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.7e-29
Identity = 73/156 (46.79%), Postives = 102/156 (65.38%), Query Frame = 1


Query: 135 KEIEEMQDKVIRTYAEMENVMARTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKER 194
           KE  E +D+++RT AEMEN+  RT+RE  +++ + I  FA+ +L++ADNL RA   V   
Sbjct: 47  KEAAEAKDRMLRTLAEMENLRKRTQREVADARAYGIAGFARDVLEIADNLQRALDAVP-- 106

Query: 195 FSKIDSSNGSSEAVLLLKTLLEGVEMTEKQLSEALKKFGVEIFDPTNEPFDPHKHNAVFQ 254
                 +   + A   L  L+EGVE+TE+ L  AL+K GV+  D   E FDP+ H A+F+
Sbjct: 107 ------AEARAAADPGLTALIEGVELTERSLHRALEKNGVKKLDAAGEKFDPNIHQAMFE 166

Query: 255 VPDGSKPPGTVAAVLKKGYMLYERVLRPAEVGVTKA 291
           VPD S PPGTV  V++ GYM+ +RVLRPA VGV+KA
Sbjct: 167 VPDNSVPPGTVVQVIQTGYMIGDRVLRPALVGVSKA 194

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BLAST of CmaCh16G009110 vs. Swiss-Prot
Match: GRPE_BRASO (Protein GrpE OS=Bradyrhizobium sp. (strain ORS278) GN=grpE PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.2e-29
Identity = 73/155 (47.10%), Postives = 104/155 (67.10%), Query Frame = 1


Query: 135 KEIEEMQDKVIRTYAEMENVMARTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKER 194
           KE  E +DK++RT AEMEN+  RT RE  +++ + I  FA+ +LD+ADNL RA   V   
Sbjct: 42  KEAAEARDKMLRTLAEMENLRKRTAREVADARMYGITGFARDVLDIADNLQRALDAVPAE 101

Query: 195 FSKIDSSNGSSEAVLLLKTLLEGVEMTEKQLSEALKKFGVEIFDPTNEPFDPHKHNAVFQ 254
            ++ ++  G       LK+L+EGVE+TE+ L   L+K GV+ FDPT + FDP+   A+++
Sbjct: 102 -TRANADAG-------LKSLIEGVELTERSLLNTLEKNGVKKFDPTGQKFDPNFQQAMYE 161

Query: 255 VPDGSKPPGTVAAVLKKGYMLYERVLRPAEVGVTK 290
           VPD S P GTV  V++ G+M+ ERVLRPA VGV+K
Sbjct: 162 VPDPSVPSGTVVQVVQAGFMIGERVLRPALVGVSK 188

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BLAST of CmaCh16G009110 vs. Swiss-Prot
Match: GRPE_RHOP5 (Protein GrpE OS=Rhodopseudomonas palustris (strain BisA53) GN=grpE PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.9e-28
Identity = 72/162 (44.44%), Postives = 108/162 (66.67%), Query Frame = 1


Query: 128 ELLKLKHKEIEEMQDKVIRTYAEMENVMARTRREAENSKKFAIQNFAKSLLDVADNLGRA 187
           + ++L  KE  E +DK++RT AEMEN+  RT RE  +++ + +  FA+ +L++ADNL RA
Sbjct: 35  DAVELLAKEAAEARDKMLRTLAEMENLRKRTTREVADARIYGVTAFARDVLEIADNLQRA 94

Query: 188 SSVVKERFSKIDSSNGSSEAVLLLKTLLEGVEMTEKQLSEALKKFGVEIFDPTNEPFDPH 247
              V    ++ ++  G       LK L++GVE+TE+ L  AL+K GV+ FDP+ + FDP+
Sbjct: 95  LDAVPAE-ARANAEPG-------LKALIDGVELTERSLINALEKNGVKKFDPSGQKFDPN 154

Query: 248 KHNAVFQVPDGSKPPGTVAAVLKKGYMLYERVLRPAEVGVTK 290
              A+++VPD S P GTV  V++ G+ML ERVLRPA VGV+K
Sbjct: 155 FQQAMYEVPDASVPAGTVVQVVQAGFMLGERVLRPALVGVSK 188

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BLAST of CmaCh16G009110 vs. Swiss-Prot
Match: GRPE_NITWN (Protein GrpE OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=grpE PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.9e-28
Identity = 82/205 (40.00%), Postives = 115/205 (56.10%), Query Frame = 1


Query: 85  SSGGSATAAEPTAETNGQTRESDSESDDNLSMDDLVKVVAEKEELLKLKHKEIEEMQDKV 144
           S G +  + EP AE      +     DD             +++ L   +K++ E +D+ 
Sbjct: 4   SDGKTDKSGEPAAEVEPVVSKPYVMPDD------------PEDDALDALNKQLAEAKDRT 63

Query: 145 IRTYAEMENVMARTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKERFSKIDSSNGS 204
           +RT AEMEN+  RT RE  +++ + I  FA+ +L++ADNL RA   V             
Sbjct: 64  LRTLAEMENLRKRTAREVSDARTYGISGFARDVLEIADNLQRALDAVPADARAAPDPG-- 123

Query: 205 SEAVLLLKTLLEGVEMTEKQLSEALKKFGVEIFDPTNEPFDPHKHNAVFQVPDGSKPPGT 264
                 LK L+EGVE+TE+ L  AL+K GV+ FDP  E FDP+ H A+++VPD S P GT
Sbjct: 124 ------LKALIEGVELTERSLHNALEKHGVKKFDPAGEKFDPNVHQAMYEVPDPSIPVGT 183

Query: 265 VAAVLKKGYMLYERVLRPAEVGVTK 290
           VA V++ GYM+ ERVLRPA VGV K
Sbjct: 184 VAQVIQAGYMIGERVLRPALVGVAK 188

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BLAST of CmaCh16G009110 vs. Swiss-Prot
Match: GRPE_RHOP2 (Protein GrpE OS=Rhodopseudomonas palustris (strain HaA2) GN=grpE PE=3 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.4e-28
Identity = 71/155 (45.81%), Postives = 101/155 (65.16%), Query Frame = 1


Query: 135 KEIEEMQDKVIRTYAEMENVMARTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKER 194
           KE  E +DK++RT AEMEN+  RT++E  +++ + +  FA+ +L++ADNL RA   V   
Sbjct: 43  KEAAEARDKMLRTLAEMENLRRRTQKEVADARTYGVSAFARDVLEIADNLQRALDAVP-- 102

Query: 195 FSKIDSSNGSSEAVLLLKTLLEGVEMTEKQLSEALKKFGVEIFDPTNEPFDPHKHNAVFQ 254
                 +   + A   LK L+EGVE+TE+ L  AL+K GV  FDP+ E FDP+   A+++
Sbjct: 103 ------AEARANADAGLKGLIEGVELTERSLINALEKNGVRKFDPSGEKFDPNFQQAMYE 162

Query: 255 VPDGSKPPGTVAAVLKKGYMLYERVLRPAEVGVTK 290
           VPD S P GTV  V++ G+M+ ERVLRPA VGV K
Sbjct: 163 VPDPSVPAGTVVQVVQAGFMIGERVLRPALVGVAK 189

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BLAST of CmaCh16G009110 vs. TrEMBL
Match: A0A0A0L683_CUCSA (GrpE protein homolog OS=Cucumis sativus GN=Csa_3G073880 PE=3 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 1.3e-121
Identity = 245/294 (83.33%), Postives = 268/294 (91.16%), Query Frame = 1


Query: 1   MFVSKLLSRAASRTIFQGSLLSSASQSHQTIRFPLLLTNRLHYLANESSNKESALHHSFF 60
           MFV+KL SR+ SRTI + SLLSSA QS + I FP+L TNRLH LAN+S +KES L+ SFF
Sbjct: 1   MFVTKLFSRS-SRTILRSSLLSSAPQSDKPIHFPIL-TNRLHSLANQSKDKESTLYRSFF 60

Query: 61  LQKFGLSTSASHETSNKENGNTVPSSGGSATAAEPTAETNGQTRESDSESDDNLSMDDLV 120
           LQK GLSTSAS ETSNKENGNTVP +GGS T AEPTAETNG+T ESDS+SDDNLSMDDLV
Sbjct: 61  LQKHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDDLV 120

Query: 121 KVVAEKEELLKLKHKEIEEMQDKVIRTYAEMENVMARTRREAENSKKFAIQNFAKSLLDV 180
           KVVAEKEELLK+KHKEIE+MQDKVIRTYAEMENVMART+REAENSKKFAIQNFAKSLLDV
Sbjct: 121 KVVAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDV 180

Query: 181 ADNLGRASSVVKERFSKIDSSNGSSEAVLLLKTLLEGVEMTEKQLSEALKKFGVEIFDPT 240
           ADNLGRASSVVK  FSKIDS+N SS AV LLKTL++GVEMTEKQLSE LKK+GVE+FDPT
Sbjct: 181 ADNLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPT 240

Query: 241 NEPFDPHKHNAVFQVPDGSKPPGTVAAVLKKGYMLYERVLRPAEVGVTKAMDNE 295
           NEPFDPH+HNAVFQVPDGSK PGTVAAVLKKGYML+ERVLRPAEVGVTKA++NE
Sbjct: 241 NEPFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENE 292

[Close]

BLAST of CmaCh16G009110 vs. TrEMBL
Match: A0A151U2B4_CAJCA (GrpE protein homolog OS=Cajanus cajan GN=KK1_006072 PE=3 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 4.4e-85
Identity = 194/314 (61.78%), Postives = 236/314 (75.16%), Query Frame = 1


Query: 1   MFVSKLLSRAASRTIFQGSLLSSASQSHQTIRFPLLLTNRLHYLANESSNKESALH---- 60
           MFV K+LSR  S+TI   SLLS ASQ  Q +      +N LH L  +S NK   +     
Sbjct: 1   MFVHKVLSRV-SKTIVGTSLLS-ASQRPQHL---FTRSNHLHSLLPQSPNKLIPVQVNVL 60

Query: 61  ----HSFFLQKFGLSTSASHETSNKENGNTVPSSGGSATAAEPTA------------ETN 120
               +S    +FG  +SAS ET++KE GN V +  G +T  +P              +T 
Sbjct: 61  LPPINSLSTPRFGFCSSASTETNDKEKGNNVRN--GDSTNDDPARANEEAKNIDQAKQTK 120

Query: 121 GQTRESDSESDDNLSMDDLVKVVAEKEELLKLKHKEIEEMQDKVIRTYAEMENVMARTRR 180
              +  +SES+ +LS DDL+K++AEKEEL+K KHKEIE+MQDKV+RTYAEMENVM RTRR
Sbjct: 121 PADKTEESESECDLSRDDLIKLLAEKEELVKSKHKEIEKMQDKVLRTYAEMENVMERTRR 180

Query: 181 EAENSKKFAIQNFAKSLLDVADNLGRASSVVKERFSKIDSSNGSSEAVLLLKTLLEGVEM 240
           EA+NSKKFAIQNFAKSLLDVADNLGRASSVVKE FSKID++N S+EAV LL+TLL+GVEM
Sbjct: 181 EADNSKKFAIQNFAKSLLDVADNLGRASSVVKESFSKIDTANDSAEAVKLLQTLLQGVEM 240

Query: 241 TEKQLSEALKKFGVEIFDPTNEPFDPHKHNAVFQVPDGSKPPGTVAAVLKKGYMLYERVL 295
           TEKQLSE LKK+GVE FDPTNEPFDPH+HNAVFQ+PDGSKPPGT+AAVLK GYMLY+RV+
Sbjct: 241 TEKQLSEVLKKYGVEKFDPTNEPFDPHRHNAVFQIPDGSKPPGTIAAVLKAGYMLYDRVI 300

[Close]

BLAST of CmaCh16G009110 vs. TrEMBL
Match: A0A059BVE6_EUCGR (GrpE protein homolog OS=Eucalyptus grandis GN=EUGRSUZ_F03503 PE=3 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 2.4e-83
Identity = 192/314 (61.15%), Postives = 229/314 (72.93%), Query Frame = 1


Query: 1   MFVSKLLSRAASRTIFQGSLLSSASQSHQTIRFPL-LLTNRLHYLANESSNKESALHHSF 60
           M VS++ SRA  R+  + +LL S S     +  PL +L+N+   L +E+S K   L+HS 
Sbjct: 73  MLVSRVFSRAW-RSAGRSALLVSPS-----LNKPLPVLSNQFDALLHETSCKALVLNHST 132

Query: 61  F----LQKFGLSTSASHETSNKENGNTVPSSGGSATAAEPTAETNG-------------- 120
           F    L++FG+S+SAS E + K  G+TV  +G S  A E      G              
Sbjct: 133 FSSSLLRRFGISSSASPEPNEKGQGSTVEKNGASTDAPEAGEHAKGSNQGEGTASGETKV 192

Query: 121 --QTRESDSESDDNLSMDDLVKVVAEKEELLKLKHKEIEEMQDKVIRTYAEMENVMARTR 180
             Q   S SE D+ LSMDDLVK+V+EKEELLKLKHK+IEEMQDKV+RTYAEMENVM RTR
Sbjct: 193 ADQAESSGSEGDEELSMDDLVKLVSEKEELLKLKHKQIEEMQDKVLRTYAEMENVMDRTR 252

Query: 181 REAENSKKFAIQNFAKSLLDVADNLGRASSVVKERFSKIDSSNGSSEAVLLLKTLLEGVE 240
           REAEN+KKFAIQ+FAKSLLDV DNL RASSVVKE F+KID+S  ++ AV LLKTLLEGVE
Sbjct: 253 REAENAKKFAIQSFAKSLLDVGDNLARASSVVKESFAKIDASKDTTGAVPLLKTLLEGVE 312

Query: 241 MTEKQLSEALKKFGVEIFDPTNEPFDPHKHNAVFQVPDGSKPPGTVAAVLKKGYMLYERV 294
           MTEKQL E  KKFG+E +DP NEPFDPH+HNAVFQ+ DGSKPPGTVA VLK GYMLYERV
Sbjct: 313 MTEKQLLEVFKKFGIEKYDPVNEPFDPHRHNAVFQMQDGSKPPGTVAVVLKSGYMLYERV 372

[Close]

BLAST of CmaCh16G009110 vs. TrEMBL
Match: A0A067L547_JATCU (GrpE protein homolog OS=Jatropha curcas GN=JCGZ_00951 PE=3 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 4.1e-83
Identity = 193/336 (57.44%), Postives = 238/336 (70.83%), Query Frame = 1


Query: 1   MFVSKLLSRAASRTIFQGSLLS-SASQSHQTIRFPLLLTNRLHYLANESSNK-----ESA 60
           M +S+++   ASR++ + SLL  S SQ  Q +    + +N++  L +E S +      S 
Sbjct: 1   MLMSRMVLSGASRSVGRRSLLLLSPSQKQQLLP---IFSNQIDSLISEHSKQFVPGQVSL 60

Query: 61  LHHSFF----LQKFGLSTSASHETSNKENGNTVPSSGGSATA-AEPTAETNGQTRE---- 120
            HHS       Q+FG ++SAS ET+ KE G+T  ++G S  A A+P+ +T     E    
Sbjct: 61  FHHSALSSSPFQRFGFTSSASPETNEKEEGSTAENNGASRNADAKPSNKTEDSASEESEK 120

Query: 121 ---------------------------SDSESDDNLSMDDLVKVVAEKEELLKLKHKEIE 180
                                      SDS+S+D+LSMDDLVK+VAEKEELLKLKHKEIE
Sbjct: 121 SGCNSESQPTMSQSVKRRRSGTKRTAFSDSDSEDDLSMDDLVKLVAEKEELLKLKHKEIE 180

Query: 181 EMQDKVIRTYAEMENVMARTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKERFSKI 240
           +MQDKV+RTYAEMENVM RT+REAENSKKFA+QNFAKSLLDVADNLGRAS+VVK+ FSKI
Sbjct: 181 KMQDKVLRTYAEMENVMERTKREAENSKKFAVQNFAKSLLDVADNLGRASAVVKDSFSKI 240

Query: 241 DSSNGSSEAVLLLKTLLEGVEMTEKQLSEALKKFGVEIFDPTNEPFDPHKHNAVFQVPDG 295
           D+S  ++ AV LLKTLLEGVEMTEKQL++  KKFGVE FDP NEPFDPHKH AVFQ+PD 
Sbjct: 241 DASTDATGAVPLLKTLLEGVEMTEKQLADVFKKFGVEKFDPINEPFDPHKHYAVFQLPDA 300

[Close]

BLAST of CmaCh16G009110 vs. TrEMBL
Match: A0A061F4J4_THECC (GrpE protein homolog (Fragment) OS=Theobroma cacao GN=TCM_030793 PE=3 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 3.5e-82
Identity = 182/274 (66.42%), Postives = 210/274 (76.64%), Query Frame = 1


Query: 37  LTNRLHYLANESSNK-----ESALHHSFF----LQKFGLSTSASHETSNKENGNTVPSSG 96
           L+N+ H L  ES NK      S LHHS       Q+FG+S+SAS E S+KE+G+ V ++G
Sbjct: 15  LSNQFHSLVYESPNKLVTSDVSLLHHSSLNFSAFQRFGISSSASPEPSDKEHGSAVENNG 74

Query: 97  GSATAAEPTAETN-------GQTRESDSESDDNLSMDDLVKVVAEKEELLKLKHKEIEEM 156
                A+P+ + N        Q +ESDSESD +LSM D+VK+V EKEELLK K KEIE+M
Sbjct: 75  QEP--AKPSGDMNPGEAEVADQAKESDSESDGDLSMADMVKIVEEKEELLKAKQKEIEQM 134

Query: 157 QDKVIRTYAEMENVMARTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKERFSKIDS 216
           QDKV+RT AEMENVMARTRREAENSKKFAIQNFAK LLDVADNLGRAS+ VK  FSKID 
Sbjct: 135 QDKVVRTLAEMENVMARTRREAENSKKFAIQNFAKGLLDVADNLGRASTHVKGSFSKIDE 194

Query: 217 SNGSSEAVLLLKTLLEGVEMTEKQLSEALKKFGVEIFDPTNEPFDPHKHNAVFQVPDGSK 276
           S  +  AV LLKTLLEGVEMTEKQL E  +KFGVE FDPTNEPFDPH+HNAVFQVPD SK
Sbjct: 195 SKETVGAVPLLKTLLEGVEMTEKQLGEVFRKFGVEKFDPTNEPFDPHRHNAVFQVPDNSK 254

Query: 277 PPGTVAAVLKKGYMLYERVLRPAEVGVTKAMDNE 295
           PPGTVA VLK GYMLY+RV+RPAEVGVT+ + N+
Sbjct: 255 PPGTVAHVLKAGYMLYDRVIRPAEVGVTQELGND 286

[Close]

BLAST of CmaCh16G009110 vs. TAIR10
Match: AT4G26780.1 (AT4G26780.1 Co-chaperone GrpE family protein)

HSP 1 Score: 278.5 bits (711), Expect = 4.8e-75
Identity = 174/327 (53.21%), Postives = 221/327 (67.58%), Query Frame = 1


Query: 1   MFVSKLLSRAASRTIFQGSLLS-SASQSHQTIRFPLLLTNRLHYLANESSNK----ESAL 60
           M V ++LSR       + SL + +    +QT  F    ++R H LA++ S+K    + ++
Sbjct: 1   MLVLRILSRVTRNAGIRSSLSAVTLPARNQTPVF----SSRFHSLAHDFSHKLVPAQMSM 60

Query: 61  HHSFFLQKFGLSTSASHETSNKENGNTVPSSGGSATAAEPTAETN--------------- 120
             SF LQ+F  S+S S E+  K+      +     +  +PTAE N               
Sbjct: 61  MDSFALQRFNFSSSTSPESDEKK----THTEASKTSEEKPTAEANQPGLDSESKDSVTDS 120

Query: 121 ------------GQTRESDSESDDN-LSMDDLVKVVAEKEELLKLKHKEIEEMQDKVIRT 180
                         + ESDSESDD+ LS DDLVK+VAEKEELL  K +EI++++DKV+RT
Sbjct: 121 AKRKRKGAKGAASSSSESDSESDDDELSADDLVKLVAEKEELLSEKEEEIKQLKDKVLRT 180

Query: 181 YAEMENVMARTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKERFSKIDSSNGSSEA 240
           YAEMENVM RTRR+AEN+KK+A+QNFAKSLLDVADNLGRASSVVKE FSK+D+S  S+ A
Sbjct: 181 YAEMENVMDRTRRDAENTKKYAVQNFAKSLLDVADNLGRASSVVKESFSKLDTSEDSAGA 240

Query: 241 VLLLKTLLEGVEMTEKQLSEALKKFGVEIFDPTNEPFDPHKHNAVFQVPDGSKPPGTVAA 295
             LLKTLLEGVEMTEKQL+E  KKFG+E +DP NEPFDP++HNAVFQVPD SKP GTVA 
Sbjct: 241 APLLKTLLEGVEMTEKQLAEVFKKFGMEKYDPINEPFDPNRHNAVFQVPDASKPEGTVAH 300

[Close]

BLAST of CmaCh16G009110 vs. TAIR10
Match: AT5G55200.1 (AT5G55200.1 Co-chaperone GrpE family protein)

HSP 1 Score: 251.1 bits (640), Expect = 8.2e-67
Identity = 156/304 (51.32%), Postives = 204/304 (67.11%), Query Frame = 1


Query: 1   MFVSKLLSRAASRTIFQGSLLSSASQSHQTIRFPLLLTNRLHYLANESSNKESALHHSF- 60
           M VS++LSR +     + S  S  +     I    ++ +R H L + + NK  A+  S  
Sbjct: 1   MLVSRVLSRVSRSAGLRSSFSSVVTPKRNQIP---IVASRFHSLVHGTPNKLVAVPVSLR 60

Query: 61  --------FLQKFGLSTSASHETSNKENGNTVPSSGGSATAAEPTAETNGQTRESDSESD 120
                    LQ+FG  +S+S E    E+   VP +G        T+E     + +D+E D
Sbjct: 61  NHGTLDLNVLQRFGFFSSSSAEPKGNESNTEVPKTG-------ETSENVEVGKATDAEID 120

Query: 121 -DNLSMDDLVKVVAEKEELLKLKHKEIEEMQDKVIRTYAEMENVMARTRREAENSKKFAI 180
            D+LS DDLVK+V+EKE+LLK++ K+I EM+DK +RTYAE +N+M RT R AE++KKFA+
Sbjct: 121 FDDLSRDDLVKLVSEKEDLLKVQQKDIMEMKDKFLRTYAEQQNLMDRTNRNAESAKKFAV 180

Query: 181 QNFAKSLLDVADNLGRASSVVKERFSKIDSSNGSSEAVLLLKTLLEGVEMTEKQLSEALK 240
           QNFA SLLDVADNL RASSVVKE FSKID+S   + A  LLK LLEGVEMTEKQL+E  +
Sbjct: 181 QNFATSLLDVADNLERASSVVKESFSKIDTSKDLAGATPLLKNLLEGVEMTEKQLAEVFR 240

Query: 241 KFGVEIFDPTNEPFDPHKHNAVFQVPDGSKPPGTVAAVLKKGYMLYERVLRPAEVGVTKA 295
           K G+   DP NEPF+P++HNAVFQVPD SKP GT+A VLK GY LY+RV+RPAEVGVT A
Sbjct: 241 KAGLVKEDPLNEPFNPNRHNAVFQVPDASKPKGTIAHVLKSGYSLYDRVIRPAEVGVTCA 294

[Close]

BLAST of CmaCh16G009110 vs. NCBI nr
Match: gi|659096511|ref|XP_008449136.1| (PREDICTED: grpE protein homolog, mitochondrial-like isoform X1 [Cucumis melo])

HSP 1 Score: 446.4 bits (1147), Expect = 3.8e-122
Identity = 244/294 (82.99%), Postives = 269/294 (91.50%), Query Frame = 1


Query: 1   MFVSKLLSRAASRTIFQGSLLSSASQSHQTIRFPLLLTNRLHYLANESSNKESALHHSFF 60
           MFV+KL SR+ SRTI + SLLSSA+QS + I  P+L  NR H LAN+S++KES LH SFF
Sbjct: 1   MFVTKLFSRS-SRTILRSSLLSSAAQSDKPIHLPIL-ANRFHSLANQSNHKESTLHRSFF 60

Query: 61  LQKFGLSTSASHETSNKENGNTVPSSGGSATAAEPTAETNGQTRESDSESDDNLSMDDLV 120
           LQKFGLSTSAS ETSNKENGN+ PS+G S T AEPTAETNG+TRESDSESDDNLS+DDLV
Sbjct: 61  LQKFGLSTSASPETSNKENGNSAPSNGSSKTDAEPTAETNGRTRESDSESDDNLSIDDLV 120

Query: 121 KVVAEKEELLKLKHKEIEEMQDKVIRTYAEMENVMARTRREAENSKKFAIQNFAKSLLDV 180
           KVVAEKEELLK+KHKEIE+MQDKVIRTYAEMENVMART+REAENSKKFA+QNFAKSLLDV
Sbjct: 121 KVVAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAVQNFAKSLLDV 180

Query: 181 ADNLGRASSVVKERFSKIDSSNGSSEAVLLLKTLLEGVEMTEKQLSEALKKFGVEIFDPT 240
           ADNLGRASSVVKE FSKIDS+N S+ AV LLKTLLEGVEMTEKQLSE LKK+GVE+FDPT
Sbjct: 181 ADNLGRASSVVKESFSKIDSTNDSAGAVPLLKTLLEGVEMTEKQLSEVLKKYGVEMFDPT 240

Query: 241 NEPFDPHKHNAVFQVPDGSKPPGTVAAVLKKGYMLYERVLRPAEVGVTKAMDNE 295
           NEPFDPH+HNAVFQVPDGSK PGTVAAVLKKGYML+ERVLRPAEVGVTKA++NE
Sbjct: 241 NEPFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENE 292

[Close]

BLAST of CmaCh16G009110 vs. NCBI nr
Match: gi|449463244|ref|XP_004149344.1| (PREDICTED: grpE protein homolog, mitochondrial [Cucumis sativus])

HSP 1 Score: 444.1 bits (1141), Expect = 1.9e-121
Identity = 245/294 (83.33%), Postives = 268/294 (91.16%), Query Frame = 1


Query: 1   MFVSKLLSRAASRTIFQGSLLSSASQSHQTIRFPLLLTNRLHYLANESSNKESALHHSFF 60
           MFV+KL SR+ SRTI + SLLSSA QS + I FP+L TNRLH LAN+S +KES L+ SFF
Sbjct: 1   MFVTKLFSRS-SRTILRSSLLSSAPQSDKPIHFPIL-TNRLHSLANQSKDKESTLYRSFF 60

Query: 61  LQKFGLSTSASHETSNKENGNTVPSSGGSATAAEPTAETNGQTRESDSESDDNLSMDDLV 120
           LQK GLSTSAS ETSNKENGNTVP +GGS T AEPTAETNG+T ESDS+SDDNLSMDDLV
Sbjct: 61  LQKHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDDLV 120

Query: 121 KVVAEKEELLKLKHKEIEEMQDKVIRTYAEMENVMARTRREAENSKKFAIQNFAKSLLDV 180
           KVVAEKEELLK+KHKEIE+MQDKVIRTYAEMENVMART+REAENSKKFAIQNFAKSLLDV
Sbjct: 121 KVVAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDV 180

Query: 181 ADNLGRASSVVKERFSKIDSSNGSSEAVLLLKTLLEGVEMTEKQLSEALKKFGVEIFDPT 240
           ADNLGRASSVVK  FSKIDS+N SS AV LLKTL++GVEMTEKQLSE LKK+GVE+FDPT
Sbjct: 181 ADNLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPT 240

Query: 241 NEPFDPHKHNAVFQVPDGSKPPGTVAAVLKKGYMLYERVLRPAEVGVTKAMDNE 295
           NEPFDPH+HNAVFQVPDGSK PGTVAAVLKKGYML+ERVLRPAEVGVTKA++NE
Sbjct: 241 NEPFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENE 292

[Close]

BLAST of CmaCh16G009110 vs. NCBI nr
Match: gi|659096513|ref|XP_008449137.1| (PREDICTED: grpE protein homolog, mitochondrial-like isoform X2 [Cucumis melo])

HSP 1 Score: 431.0 bits (1107), Expect = 1.6e-117
Identity = 239/294 (81.29%), Postives = 263/294 (89.46%), Query Frame = 1


Query: 1   MFVSKLLSRAASRTIFQGSLLSSASQSHQTIRFPLLLTNRLHYLANESSNKESALHHSFF 60
           MFV+KL SR+ SRTI + SLLSSA+QS + I  P+L  NR H LAN+S++KES LH SFF
Sbjct: 1   MFVTKLFSRS-SRTILRSSLLSSAAQSDKPIHLPIL-ANRFHSLANQSNHKESTLHRSFF 60

Query: 61  LQKFGLSTSASHETSNKENGNTVPSSGGSATAAEPTAETNGQTRESDSESDDNLSMDDLV 120
           LQKFGLSTSAS ETSNKENGN+ PS+G S T AEPTAETN      DSESDDNLS+DDLV
Sbjct: 61  LQKFGLSTSASPETSNKENGNSAPSNGSSKTDAEPTAETN------DSESDDNLSIDDLV 120

Query: 121 KVVAEKEELLKLKHKEIEEMQDKVIRTYAEMENVMARTRREAENSKKFAIQNFAKSLLDV 180
           KVVAEKEELLK+KHKEIE+MQDKVIRTYAEMENVMART+REAENSKKFA+QNFAKSLLDV
Sbjct: 121 KVVAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAVQNFAKSLLDV 180

Query: 181 ADNLGRASSVVKERFSKIDSSNGSSEAVLLLKTLLEGVEMTEKQLSEALKKFGVEIFDPT 240
           ADNLGRASSVVKE FSKIDS+N S+ AV LLKTLLEGVEMTEKQLSE LKK+GVE+FDPT
Sbjct: 181 ADNLGRASSVVKESFSKIDSTNDSAGAVPLLKTLLEGVEMTEKQLSEVLKKYGVEMFDPT 240

Query: 241 NEPFDPHKHNAVFQVPDGSKPPGTVAAVLKKGYMLYERVLRPAEVGVTKAMDNE 295
           NEPFDPH+HNAVFQVPDGSK PGTVAAVLKKGYML+ERVLRPAEVGVTKA++NE
Sbjct: 241 NEPFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENE 286

[Close]

BLAST of CmaCh16G009110 vs. NCBI nr
Match: gi|802588479|ref|XP_012070908.1| (PREDICTED: grpE protein homolog, mitochondrial isoform X2 [Jatropha curcas])

HSP 1 Score: 323.6 bits (828), Expect = 3.7e-85
Identity = 191/307 (62.21%), Postives = 236/307 (76.87%), Query Frame = 1


Query: 1   MFVSKLLSRAASRTIFQGSLLS-SASQSHQTIRFPLLLTNRLHYLANESSNK-----ESA 60
           M +S+++   ASR++ + SLL  S SQ  Q +    + +N++  L +E S +      S 
Sbjct: 1   MLMSRMVLSGASRSVGRRSLLLLSPSQKQQLLP---IFSNQIDSLISEHSKQFVPGQVSL 60

Query: 61  LHHSFF----LQKFGLSTSASHETSNKENGNTVPSSGGSATA-AEPTAETNGQTRESD-- 120
            HHS       Q+FG ++SAS ET+ KE G+T  ++G S  A A+P+ +T     E    
Sbjct: 61  FHHSALSSSPFQRFGFTSSASPETNEKEEGSTAENNGASRNADAKPSNKTEDSASEESEK 120

Query: 121 SESDDNLSMDDLVKVVAEKEELLKLKHKEIEEMQDKVIRTYAEMENVMARTRREAENSKK 180
           S+S+D+LSMDDLVK+VAEKEELLKLKHKEIE+MQDKV+RTYAEMENVM RT+REAENSKK
Sbjct: 121 SDSEDDLSMDDLVKLVAEKEELLKLKHKEIEKMQDKVLRTYAEMENVMERTKREAENSKK 180

Query: 181 FAIQNFAKSLLDVADNLGRASSVVKERFSKIDSSNGSSEAVLLLKTLLEGVEMTEKQLSE 240
           FA+QNFAKSLLDVADNLGRAS+VVK+ FSKID+S  ++ AV LLKTLLEGVEMTEKQL++
Sbjct: 181 FAVQNFAKSLLDVADNLGRASAVVKDSFSKIDASTDATGAVPLLKTLLEGVEMTEKQLAD 240

Query: 241 ALKKFGVEIFDPTNEPFDPHKHNAVFQVPDGSKPPGTVAAVLKKGYMLYERVLRPAEVGV 295
             KKFGVE FDP NEPFDPHKH AVFQ+PD SKPPGTVAAVLK GY+LY+RV+RPAEVGV
Sbjct: 241 VFKKFGVEKFDPINEPFDPHKHYAVFQLPDASKPPGTVAAVLKAGYVLYDRVIRPAEVGV 300

[Close]

BLAST of CmaCh16G009110 vs. NCBI nr
Match: gi|1012362264|gb|KYP73447.1| (Protein grpE [Cajanus cajan])

HSP 1 Score: 322.8 bits (826), Expect = 6.3e-85
Identity = 194/314 (61.78%), Postives = 236/314 (75.16%), Query Frame = 1


Query: 1   MFVSKLLSRAASRTIFQGSLLSSASQSHQTIRFPLLLTNRLHYLANESSNKESALH---- 60
           MFV K+LSR  S+TI   SLLS ASQ  Q +      +N LH L  +S NK   +     
Sbjct: 1   MFVHKVLSRV-SKTIVGTSLLS-ASQRPQHL---FTRSNHLHSLLPQSPNKLIPVQVNVL 60

Query: 61  ----HSFFLQKFGLSTSASHETSNKENGNTVPSSGGSATAAEPTA------------ETN 120
               +S    +FG  +SAS ET++KE GN V +  G +T  +P              +T 
Sbjct: 61  LPPINSLSTPRFGFCSSASTETNDKEKGNNVRN--GDSTNDDPARANEEAKNIDQAKQTK 120

Query: 121 GQTRESDSESDDNLSMDDLVKVVAEKEELLKLKHKEIEEMQDKVIRTYAEMENVMARTRR 180
              +  +SES+ +LS DDL+K++AEKEEL+K KHKEIE+MQDKV+RTYAEMENVM RTRR
Sbjct: 121 PADKTEESESECDLSRDDLIKLLAEKEELVKSKHKEIEKMQDKVLRTYAEMENVMERTRR 180

Query: 181 EAENSKKFAIQNFAKSLLDVADNLGRASSVVKERFSKIDSSNGSSEAVLLLKTLLEGVEM 240
           EA+NSKKFAIQNFAKSLLDVADNLGRASSVVKE FSKID++N S+EAV LL+TLL+GVEM
Sbjct: 181 EADNSKKFAIQNFAKSLLDVADNLGRASSVVKESFSKIDTANDSAEAVKLLQTLLQGVEM 240

Query: 241 TEKQLSEALKKFGVEIFDPTNEPFDPHKHNAVFQVPDGSKPPGTVAAVLKKGYMLYERVL 295
           TEKQLSE LKK+GVE FDPTNEPFDPH+HNAVFQ+PDGSKPPGT+AAVLK GYMLY+RV+
Sbjct: 241 TEKQLSEVLKKYGVEKFDPTNEPFDPHRHNAVFQIPDGSKPPGTIAAVLKAGYMLYDRVI 300

The following BLAST results are available for this feature:

BLAST of CmaCh16G009110 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GRPE_OLICO	1.7e-29	46.79	Protein GrpE OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5)...	[more]
GRPE_BRASO	2.2e-29	47.10	Protein GrpE OS=Bradyrhizobium sp. (strain ORS278) GN=grpE PE=3 SV=1	[more]
GRPE_RHOP5	1.9e-28	44.44	Protein GrpE OS=Rhodopseudomonas palustris (strain BisA53) GN=grpE PE=3 SV=1	[more]
GRPE_NITWN	1.9e-28	40.00	Protein GrpE OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=grpE PE...	[more]
GRPE_RHOP2	2.4e-28	45.81	Protein GrpE OS=Rhodopseudomonas palustris (strain HaA2) GN=grpE PE=3 SV=1	[more]

BLAST of CmaCh16G009110 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L683_CUCSA	1.3e-121	83.33	GrpE protein homolog OS=Cucumis sativus GN=Csa_3G073880 PE=3 SV=1	[more]
A0A151U2B4_CAJCA	4.4e-85	61.78	GrpE protein homolog OS=Cajanus cajan GN=KK1_006072 PE=3 SV=1	[more]
A0A059BVE6_EUCGR	2.4e-83	61.15	GrpE protein homolog OS=Eucalyptus grandis GN=EUGRSUZ_F03503 PE=3 SV=1	[more]
A0A067L547_JATCU	4.1e-83	57.44	GrpE protein homolog OS=Jatropha curcas GN=JCGZ_00951 PE=3 SV=1	[more]
A0A061F4J4_THECC	3.5e-82	66.42	GrpE protein homolog (Fragment) OS=Theobroma cacao GN=TCM_030793 PE=3 SV=1	[more]

BLAST of CmaCh16G009110 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G26780.1	4.8e-75	53.21	Co-chaperone GrpE family protein	[more]
AT5G55200.1	8.2e-67	51.32	Co-chaperone GrpE family protein	[more]

BLAST of CmaCh16G009110 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659096511\|ref\|XP_008449136.1\|	3.8e-122	82.99	PREDICTED: grpE protein homolog, mitochondrial-like isoform X1 [Cucumis melo]	[more]
gi\|449463244\|ref\|XP_004149344.1\|	1.9e-121	83.33	PREDICTED: grpE protein homolog, mitochondrial [Cucumis sativus]	[more]
gi\|659096513\|ref\|XP_008449137.1\|	1.6e-117	81.29	PREDICTED: grpE protein homolog, mitochondrial-like isoform X2 [Cucumis melo]	[more]
gi\|802588479\|ref\|XP_012070908.1\|	3.7e-85	62.21	PREDICTED: grpE protein homolog, mitochondrial isoform X2 [Jatropha curcas]	[more]
gi\|1012362264\|gb\|KYP73447.1\|	6.3e-85	61.78	Protein grpE [Cajanus cajan]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000740	GrpE
IPR009012	GrpE_head
IPR013805	GrpE_coiled_coil

Vocabulary: **Molecular Function**
Term	Definition
GO:0000774	adenyl-nucleotide exchange factor activity
GO:0042803	protein homodimerization activity
GO:0051087	chaperone binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0005759	mitochondrial matrix
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0000774	adenyl-nucleotide exchange factor activity
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0042803	protein homodimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G009110.1	CmaCh16G009110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000740	GrpE nucleotide exchange factor	PRINTS	PR00773	GRPEPROTEIN	coord: 145..161 score: 3.9E-16coord: 241..256 score: 3.9E-16coord: 268..287 score: 3.9
IPR000740	GrpE nucleotide exchange factor	HAMAP	MF_01151	GrpE	coord: 75..289 score: 18
IPR000740	GrpE nucleotide exchange factor	PANTHER	PTHR21237	GRPE PROTEIN	coord: 7..292 score: 1.9E
IPR000740	GrpE nucleotide exchange factor	PFAM	PF01025	GrpE	coord: 123..289 score: 1.4
IPR000740	GrpE nucleotide exchange factor	PROSITE	PS01071	GRPE	coord: 244..287 scor
IPR009012	GrpE nucleotide exchange factor, head	GENE3D	G3DSA:2.30.22.10		coord: 233..289 score: 1.0
IPR009012	GrpE nucleotide exchange factor, head	unknown	SSF51064	Head domain of nucleotide exchange factor GrpE	coord: 234..289 score: 9.29
IPR013805	GrpE nucleotide exchange factor, coiled-coil	GENE3D	G3DSA:3.90.20.20		coord: 123..232 score: 3.2
None	No IPR available	unknown	Coil	Coil	coord: 123..143 scor
None	No IPR available	PANTHER	PTHR21237:SF23	GRPE PROTEIN HOMOLOG, MITOCHONDRIAL	coord: 7..292 score: 1.9E
None	No IPR available	unknown	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE	coord: 124..233 score: 7.72

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh16G009110	Cucsa.042750	Cucumber (Gy14) v1	cgycmaB0029
CmaCh16G009110	Cla005340	Watermelon (97103) v1	cmawmB300
CmaCh16G009110	Csa3G073880	Cucumber (Chinese Long) v2	cmacuB327
CmaCh16G009110	MELO3C014179	Melon (DHL92) v3.5.1	cmameB290
CmaCh16G009110	ClCG10G005130	Watermelon (Charleston Gray)	cmawcgB285
CmaCh16G009110	CSPI03G04820	Wild cucumber (PI 183967)	cmacpiB333
CmaCh16G009110	CmoCh06G008930	Cucurbita moschata (Rifu)	cmacmoB345
CmaCh16G009110	CmoCh16G009460	Cucurbita moschata (Rifu)	cmacmoB323
CmaCh16G009110	Lsi05G005680	Bottle gourd (USVL1VR-Ls)	cmalsiB317
CmaCh16G009110	Cp4.1LG14g07350	Cucurbita pepo (Zucchini)	cmacpeB345
CmaCh16G009110	MELO3C014179.2	Melon (DHL92) v3.6.1	cmamedB343
CmaCh16G009110	CsaV3_3G004810	Cucumber (Chinese Long) v3	cmacucB0381
CmaCh16G009110	Cla97C10G189370	Watermelon (97103) v2	cmawmbB338
CmaCh16G009110	Bhi11G000443	Wax gourd	cmawgoB0419
CmaCh16G009110	CsGy3G004880	Cucumber (Gy14) v2	cgybcmaB340
CmaCh16G009110	Carg26942	Silver-seed gourd	carcmaB0979
CmaCh16G009110	Carg25348	Silver-seed gourd	carcmaB0676

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh16G009110	CmaCh06G008680	Cucurbita maxima (Rimu)	cmacmaB358

The following block(s) are covering this gene:

None