CsaV3_3G001900 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G001900
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionPentatricopeptide repeat-containing protein
Locationchr3 : 1406317 .. 1408449 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGTTCCTCTTTCTTCCTCTCTCGACCTCAAGCTCAAACCAACACCCATCTTCTTCACTTCCCCTCTCCGCCGGAAGAATGTTACCAAACGATTAACACTCCTCTGTTCCTCTTCCAAATCCCCACGAAAGCCTTCTTCAGTTTCATCACAATCGGTTGACAACAAAAACCCTTCTCTATCCGAGCAGCTCAAGAATCTCTCCACAACCACACTTTCCAATGCACCCAACGACGAAACCCGTCTCTTATCTAAGCCTAAATCCACTTGGGTTAACCCCACCAAACCTAAACGCTCTGTTCTATCTCTCCAGAGACAAAAGCGTTCTTCTTACTCTTATAACCCCAAGATGCGAGACCTTAAATCCTTTGCCCATAAGCTCAATGCCTGTGATTCCTCTGATGACGCTTCTTTCATTGCGGCTCTTGAGGAAATTCCTCACCCACCCACTAAAGAAAATGCCCTTCTCATTCTCAATAGCTTGAGGCCGTGGCAGAAAACCCATTTGTTCTTCAATTGGATTAAGTCCCAGAATTTGTTTCCTATGGAGACTATCTTCTACAATGTGGCTATGAAGTCTTTGAGGTATGGTAGGCAGTTTCAACTTATTGAAGATCTTGCTAACGAGATGATTAGCGCTGGGATTGAGCTTGATAACATTACTTATTCTACTATTATTACTTGTGCTAAAAAGTGTAGTAGGTTTGATAAGGCAATGGAGTGGTTTGAGAGAATGTATAAAACTGGTTTGATGCCTGATGAGGTTACTTACTCTGCTATTTTAGATGTTTATGCTAATTTAGGGAAAGTTGAGGAGGTTCTTAGTTTGTATGAAAGAGGGAGAGCTAGTGGTTGGACGCCTGATCCTTATACATTTTCTGTGTTGGGAAAGATGTTTGGAGAGGCAGGGGATTATGATGGGATTATGTATGTTTTGCAAGAAATGAAATCTATTGAGATGCAGCCTAATCTTGTTGTGTATAACACTTTGTTGGATGCAATGGGGAAGGCTGGGAAACCTGGTTTCGCAAGAAGTTTGTTCGACGAAATGGTTGAATCGGGGATAACGCCAAATGAGAAGACATTGACTGCTCTGGTTAAGATTTATGGAAAGGCAAGGTGGGCAAGAGATGCTTTAGACTTGTGGGAGCGGATGAGATCGAATGGGTGGCCGATGGATTTCATTTTGTATAATACATTATTGAATATGTGTGCTGATCTTGGTTTGGAGGAGGAAGCTGAGACGCTCTTTGAAGAGATGAAGAAGTCAAAGCATTCTAGGCCAGATAGTTGGAGCTACACAGCAATGTTGAATATATATGGTAGTGGAGGTAATGTGAAAAGATCCATGGAGTTGTTCGAAGAAATGCTCGAGTTGGGTGTTGAGATTAACGTGATGTGTTGCACTTGTTTGATTCAATGCTTGGGGAAATCTGGGAGAATCGATGATCTAGTTCGAGTTTTCAATGTTTCAGTACAAAAAGGGATTAAGCCAGACGATAGGCTTTGTGGTTGCTTGTTGTCTGTTCTGTCCTTGTGTTACAATAGTGAAGATATTAACAAGGTATTCACTTGTCTACAACAAGCTAACCCTAAGTTAGTTTCCTTCATAAATCTTCTGCAACAAAACGACATTACCTTTGAAGTTGTCAAAAACGAATTCAGAAACATTCTCGGTGAGACAGCCCCTGAAGCTCGACGTCCTTTCTGCAATTGCTTGATTGATATATGTCGAAACCAAAATCTTCGCGAGAGAGCTCATGAATTGCTCTACTTGGGAAGTTTATATGGATTGTACCCAGGCCTACACAACAAAACTGAGACCGAATGGTGCCTGGATGTTCGATCTCTGTCAGTAGGTGCAGCTCAAACTGCACTTGAAGAATGGATGATAACTCTATCAAAAATCGTACAACGAGAAGAAGCATTACCTGAATTGTTATCAGCTCAAACCGGAGCAGGAACTCACAGGTTTTCTCAAGGACTAGCCAATTCATTTGCTTCTCATGTAGACAAACTTGCTGCTCCATTTCAACTGCGAGAAGATCGAGCTGGTTGGTTTGTAGCCACAAGGGAGGATTTAGTTACATGGGTGCATTCAAGAGTACCATCTGTGGCTGCCACAGCTTAA

mRNA sequence

ATGGCGGTTCCTCTTTCTTCCTCTCTCGACCTCAAGCTCAAACCAACACCCATCTTCTTCACTTCCCCTCTCCGCCGGAAGAATGTTACCAAACGATTAACACTCCTCTGTTCCTCTTCCAAATCCCCACGAAAGCCTTCTTCAGTTTCATCACAATCGGTTGACAACAAAAACCCTTCTCTATCCGAGCAGCTCAAGAATCTCTCCACAACCACACTTTCCAATGCACCCAACGACGAAACCCGTCTCTTATCTAAGCCTAAATCCACTTGGGTTAACCCCACCAAACCTAAACGCTCTGTTCTATCTCTCCAGAGACAAAAGCGTTCTTCTTACTCTTATAACCCCAAGATGCGAGACCTTAAATCCTTTGCCCATAAGCTCAATGCCTGTGATTCCTCTGATGACGCTTCTTTCATTGCGGCTCTTGAGGAAATTCCTCACCCACCCACTAAAGAAAATGCCCTTCTCATTCTCAATAGCTTGAGGCCGTGGCAGAAAACCCATTTGTTCTTCAATTGGATTAAGTCCCAGAATTTGTTTCCTATGGAGACTATCTTCTACAATGTGGCTATGAAGTCTTTGAGGTATGGTAGGCAGTTTCAACTTATTGAAGATCTTGCTAACGAGATGATTAGCGCTGGGATTGAGCTTGATAACATTACTTATTCTACTATTATTACTTGTGCTAAAAAGTGTAGTAGGTTTGATAAGGCAATGGAGTGGTTTGAGAGAATGTATAAAACTGGTTTGATGCCTGATGAGGTTACTTACTCTGCTATTTTAGATGTTTATGCTAATTTAGGGAAAGTTGAGGAGGTTCTTAGTTTGTATGAAAGAGGGAGAGCTAGTGGTTGGACGCCTGATCCTTATACATTTTCTGTGTTGGGAAAGATGTTTGGAGAGGCAGGGGATTATGATGGGATTATGTATGTTTTGCAAGAAATGAAATCTATTGAGATGCAGCCTAATCTTGTTGTGTATAACACTTTGTTGGATGCAATGGGGAAGGCTGGGAAACCTGGTTTCGCAAGAAGTTTGTTCGACGAAATGGTTGAATCGGGGATAACGCCAAATGAGAAGACATTGACTGCTCTGGTTAAGATTTATGGAAAGGCAAGGTGGGCAAGAGATGCTTTAGACTTGTGGGAGCGGATGAGATCGAATGGGTGGCCGATGGATTTCATTTTGTATAATACATTATTGAATATGTGTGCTGATCTTGGTTTGGAGGAGGAAGCTGAGACGCTCTTTGAAGAGATGAAGAAGTCAAAGCATTCTAGGCCAGATAGTTGGAGCTACACAGCAATGTTGAATATATATGGTAGTGGAGGTAATGTGAAAAGATCCATGGAGTTGTTCGAAGAAATGCTCGAGTTGGGTGTTGAGATTAACGTGATGTGTTGCACTTGTTTGATTCAATGCTTGGGGAAATCTGGGAGAATCGATGATCTAGTTCGAGTTTTCAATGTTTCAGTACAAAAAGGGATTAAGCCAGACGATAGGCTTTGTGGTTGCTTGTTGTCTGTTCTGTCCTTGTGTTACAATAGTGAAGATATTAACAAGGTATTCACTTGTCTACAACAAGCTAACCCTAAGTTAGTTTCCTTCATAAATCTTCTGCAACAAAACGACATTACCTTTGAAGTTGTCAAAAACGAATTCAGAAACATTCTCGGTGAGACAGCCCCTGAAGCTCGACGTCCTTTCTGCAATTGCTTGATTGATATATGTCGAAACCAAAATCTTCGCGAGAGAGCTCATGAATTGCTCTACTTGGGAAGTTTATATGGATTGTACCCAGGCCTACACAACAAAACTGAGACCGAATGGTGCCTGGATGTTCGATCTCTGTCAGTAGGTGCAGCTCAAACTGCACTTGAAGAATGGATGATAACTCTATCAAAAATCGTACAACGAGAAGAAGCATTACCTGAATTGTTATCAGCTCAAACCGGAGCAGGAACTCACAGGTTTTCTCAAGGACTAGCCAATTCATTTGCTTCTCATGTAGACAAACTTGCTGCTCCATTTCAACTGCGAGAAGATCGAGCTGGTTGGTTTGTAGCCACAAGGGAGGATTTAGTTACATGGGTGCATTCAAGAGTACCATCTGTGGCTGCCACAGCTTAA

Coding sequence (CDS)

ATGGCGGTTCCTCTTTCTTCCTCTCTCGACCTCAAGCTCAAACCAACACCCATCTTCTTCACTTCCCCTCTCCGCCGGAAGAATGTTACCAAACGATTAACACTCCTCTGTTCCTCTTCCAAATCCCCACGAAAGCCTTCTTCAGTTTCATCACAATCGGTTGACAACAAAAACCCTTCTCTATCCGAGCAGCTCAAGAATCTCTCCACAACCACACTTTCCAATGCACCCAACGACGAAACCCGTCTCTTATCTAAGCCTAAATCCACTTGGGTTAACCCCACCAAACCTAAACGCTCTGTTCTATCTCTCCAGAGACAAAAGCGTTCTTCTTACTCTTATAACCCCAAGATGCGAGACCTTAAATCCTTTGCCCATAAGCTCAATGCCTGTGATTCCTCTGATGACGCTTCTTTCATTGCGGCTCTTGAGGAAATTCCTCACCCACCCACTAAAGAAAATGCCCTTCTCATTCTCAATAGCTTGAGGCCGTGGCAGAAAACCCATTTGTTCTTCAATTGGATTAAGTCCCAGAATTTGTTTCCTATGGAGACTATCTTCTACAATGTGGCTATGAAGTCTTTGAGGTATGGTAGGCAGTTTCAACTTATTGAAGATCTTGCTAACGAGATGATTAGCGCTGGGATTGAGCTTGATAACATTACTTATTCTACTATTATTACTTGTGCTAAAAAGTGTAGTAGGTTTGATAAGGCAATGGAGTGGTTTGAGAGAATGTATAAAACTGGTTTGATGCCTGATGAGGTTACTTACTCTGCTATTTTAGATGTTTATGCTAATTTAGGGAAAGTTGAGGAGGTTCTTAGTTTGTATGAAAGAGGGAGAGCTAGTGGTTGGACGCCTGATCCTTATACATTTTCTGTGTTGGGAAAGATGTTTGGAGAGGCAGGGGATTATGATGGGATTATGTATGTTTTGCAAGAAATGAAATCTATTGAGATGCAGCCTAATCTTGTTGTGTATAACACTTTGTTGGATGCAATGGGGAAGGCTGGGAAACCTGGTTTCGCAAGAAGTTTGTTCGACGAAATGGTTGAATCGGGGATAACGCCAAATGAGAAGACATTGACTGCTCTGGTTAAGATTTATGGAAAGGCAAGGTGGGCAAGAGATGCTTTAGACTTGTGGGAGCGGATGAGATCGAATGGGTGGCCGATGGATTTCATTTTGTATAATACATTATTGAATATGTGTGCTGATCTTGGTTTGGAGGAGGAAGCTGAGACGCTCTTTGAAGAGATGAAGAAGTCAAAGCATTCTAGGCCAGATAGTTGGAGCTACACAGCAATGTTGAATATATATGGTAGTGGAGGTAATGTGAAAAGATCCATGGAGTTGTTCGAAGAAATGCTCGAGTTGGGTGTTGAGATTAACGTGATGTGTTGCACTTGTTTGATTCAATGCTTGGGGAAATCTGGGAGAATCGATGATCTAGTTCGAGTTTTCAATGTTTCAGTACAAAAAGGGATTAAGCCAGACGATAGGCTTTGTGGTTGCTTGTTGTCTGTTCTGTCCTTGTGTTACAATAGTGAAGATATTAACAAGGTATTCACTTGTCTACAACAAGCTAACCCTAAGTTAGTTTCCTTCATAAATCTTCTGCAACAAAACGACATTACCTTTGAAGTTGTCAAAAACGAATTCAGAAACATTCTCGGTGAGACAGCCCCTGAAGCTCGACGTCCTTTCTGCAATTGCTTGATTGATATATGTCGAAACCAAAATCTTCGCGAGAGAGCTCATGAATTGCTCTACTTGGGAAGTTTATATGGATTGTACCCAGGCCTACACAACAAAACTGAGACCGAATGGTGCCTGGATGTTCGATCTCTGTCAGTAGGTGCAGCTCAAACTGCACTTGAAGAATGGATGATAACTCTATCAAAAATCGTACAACGAGAAGAAGCATTACCTGAATTGTTATCAGCTCAAACCGGAGCAGGAACTCACAGGTTTTCTCAAGGACTAGCCAATTCATTTGCTTCTCATGTAGACAAACTTGCTGCTCCATTTCAACTGCGAGAAGATCGAGCTGGTTGGTTTGTAGCCACAAGGGAGGATTTAGTTACATGGGTGCATTCAAGAGTACCATCTGTGGCTGCCACAGCTTAA

Protein sequence

MAVPLSSSLDLKLKPTPIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVDNKNPSLSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMRDLKSFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCAKKCSRFDKAMEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWTPDPYTFSVLGKMFGEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAETLFEEMKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVLSLCYNSEDINKVFTCLQQANPKLVSFINLLQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLYPGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRFSQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA
Homology
[Close]
BLAST of CsaV3_3G001900 vs. NCBI nr
Match: XP_004148730.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g46580, chloroplastic [Cucumis sativus] >KGN55781.1 hypothetical protein Csa_3G011820 [Cucumis sativus])

HSP 1 Score: 817.4 bits (2110), Expect = 3.8e-233
Identity = 710/710 (100.00%), Postives = 710/710 (100.00%), Query Frame = 0 

Query: 1   MAVPLSSSLDLKLKPTPIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVDNKNPS 60
           MAVPLSSSLDLKLKPTPIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVDNKNPS
Sbjct: 1   MAVPLSSSLDLKLKPTPIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVDNKNPS 60

Query: 61  LSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           LSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  LSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQNL 180
           XXXFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQNL
Sbjct: 121 XXXFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQNL 180

Query: 181 FPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCXXXXXXXXXXX 240
           FPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCXXXXXXXXXXX
Sbjct: 181 FPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDFILYNTLLNMCADLGLEEEAETLFEE 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDFILYNTLLNMCADLGLEEEAETLFEE
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDFILYNTLLNMCADLGLEEEAETLFEE 420

Query: 421 MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCXXXXXXXXXXX 480
           MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCXXXXXXXXXXX
Sbjct: 421 MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQANPKLVSFINL 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQANPKLVSFINL
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQANPKLVSFINL 540

Query: 541 LQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY 600
           LQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY
Sbjct: 541 LQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY 600

Query: 601 PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRFS 660
           PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRFS
Sbjct: 601 PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRFS 660

Query: 661 QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 711
           QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA
Sbjct: 661 QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 710

[Close]
BLAST of CsaV3_3G001900 vs. NCBI nr
Match: XP_008448710.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g46580, chloroplastic [Cucumis melo])

HSP 1 Score: 780.8 bits (2015), Expect = 4.0e-222
Identity = 686/710 (96.62%), Postives = 698/710 (98.31%), Query Frame = 0 

Query: 1   MAVPLSSSLDLKLKPTPIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVDNKNPS 60
           MA PLSSSLD KLKPTPIFFTS LRRK V KRLTLLCSSSKSPRKPSS+SS+S+DNKNPS
Sbjct: 1   MAAPLSSSLDFKLKPTPIFFTSLLRRKYVNKRLTLLCSSSKSPRKPSSISSESIDNKNPS 60

Query: 61  LSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           LS+QLKNLSTTTLSNAPNDETRLLSKPKSTWVNPXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  LSDQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQNL 180
           XXXFAHKLNACDSSD+ASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIK+QNL
Sbjct: 121 XXXFAHKLNACDSSDEASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQNL 180

Query: 181 FPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCXXXXXXXXXXX 240
           FPMETIFYNVAMKSLRYGRQFQLIEDLAN+M+S GIELDNITYSTIITC XXXXXXXXXX
Sbjct: 181 FPMETIFYNVAMKSLRYGRQFQLIEDLANDMVSTGIELDNITYSTIITCAXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDFILYNTLLNMCADLGLEEEAETLFEE 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDFILYNTLLNMCADLGLEEEAE LFEE
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDFILYNTLLNMCADLGLEEEAEKLFEE 420

Query: 421 MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCXXXXXXXXXXX 480
           MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEML+LGVEINVMCCXXXXXXXXXXX
Sbjct: 421 MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLKLGVEINVMCCXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQANPKLVSFINL 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQANPKLVSF+NL
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQANPKLVSFVNL 540

Query: 541 LQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY 600
           LQQN ITFEV+KNEFRNIL ETA EARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY
Sbjct: 541 LQQNSITFEVIKNEFRNILSETASEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY 600

Query: 601 PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRFS 660
           PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQR+EALPELLSAQTGAGTHRFS
Sbjct: 601 PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQRKEALPELLSAQTGAGTHRFS 660

Query: 661 QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 711
           QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSV ATA
Sbjct: 661 QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVPATA 710

[Close]
BLAST of CsaV3_3G001900 vs. NCBI nr
Match: XP_023007724.1 (pentatricopeptide repeat-containing protein At5g46580, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 670.6 bits (1729), Expect = 5.8e-189
Identity = 556/715 (77.76%), Postives = 578/715 (80.84%), Query Frame = 0 

Query: 1   MAVPLSSSLD----LKLKPT-PIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVD 60
           MA PLSSSLD    LKLKPT P+FFTSPLRR N TKRLT+LC+SSKSPR        S D
Sbjct: 1   MAAPLSSSLDIKLRLKLKPTPPLFFTSPLRRNNFTKRLTVLCTSSKSPR--------STD 60

Query: 61  NKNPSLSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPXXXXXXXXXXXXXXXXXXXXX 120
            KN SLSEQLK+LST TLSNA NDE+ LLS PKS WVNP                     
Sbjct: 61  KKNSSLSEQLKDLSTCTLSNASNDESHLLSNPKSIWVNPTKPKRSVLSLQRQKRSSYSYN 120

Query: 121 XXXXXXXXFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWI 180
                   FAHKLNA D S +A+F+A L+EIPHPPTKENALLILNSL+PWQKTHLFFNWI
Sbjct: 121 PKMRELKTFAHKLNASDFS-EAAFMAVLKEIPHPPTKENALLILNSLKPWQKTHLFFNWI 180

Query: 181 KSQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCXXXXXX 240
           K+QNLFPMETIFYNVAMKSLRYGRQFQLIE+LANEMI+ GIELD          XXXXXX
Sbjct: 181 KTQNLFPMETIFYNVAMKSLRYGRQFQLIEELANEMINTGIELDXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDFILYNTLLNMCADLGLEEEAE 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDFILYNTLLNMCADLGLEEEAE
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDFILYNTLLNMCADLGLEEEAE 420

Query: 421 TLFEEMKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCXXXXXX 480
            LFEEMKKS+HSRPDSWSYTAMLNI+GSGGNVKRSMELFEEMLELGV INVMCC      
Sbjct: 421 KLFEEMKKSEHSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVGINVMCCTCLIQC 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQANPKLV 540
                                                               QQANPKLV
Sbjct: 481 LGKARRIDDLVRVFDVSVRKGVKPDDRLCGCLLSVVSLCDNNEDISKVFTCLQQANPKLV 540

Query: 541 SFINLLQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGS 600
            F+NLLQQNDITF+V+K+EFR ILGET  EARRPFCNCLIDICRNQNL +RAHELLYLGS
Sbjct: 541 EFVNLLQQNDITFDVIKDEFRTILGETTTEARRPFCNCLIDICRNQNLSKRAHELLYLGS 600

Query: 601 LYGLYPGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAG 660
           LYGLYPGLHNKTE EWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAG
Sbjct: 601 LYGLYPGLHNKTEGEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAG 660

Query: 661 THRFSQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 711
           THRFSQGLANSFASHV+KLAAPF+LREDRAGWFVATRED V WVHSRVPSVA TA
Sbjct: 661 THRFSQGLANSFASHVEKLAAPFRLREDRAGWFVATREDFVAWVHSRVPSVATTA 706

[Close]
BLAST of CsaV3_3G001900 vs. NCBI nr
Match: XP_022145326.1 (pentatricopeptide repeat-containing protein At5g46580, chloroplastic [Momordica charantia])

HSP 1 Score: 664.5 bits (1713), Expect = 4.1e-187
Identity = 615/697 (88.24%), Postives = 637/697 (91.39%), Query Frame = 0 

Query: 14  KPTPIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVDNKNPSLSEQLKNLSTTTL 73
           KP+P+FFTSPLRRKN TKRLT+LCSSSKSPRK S           PSLS+QLKNLSTTTL
Sbjct: 21  KPSPMFFTSPLRRKNFTKRLTVLCSSSKSPRK-SPQXXXXXXXXXPSLSDQLKNLSTTTL 80

Query: 74  SNAP-NDETRLLSKPKSTWVNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAHKLNACD 133
           S +P +DE+ LLSKPKSTWVNP XXXXXXXXXXXXXXXXXXXXXXXXXXXX A KLNACD
Sbjct: 81  STSPKDDESHLLSKPKSTWVNPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQKLNACD 140

Query: 134 SSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQNLFPMETIFYNVAM 193
           SS+ A F+AALEEIPHPPTKENALLILNSL+PWQKT +FFNWIKSQNLFPMETIFYNVAM
Sbjct: 141 SSESA-FVAALEEIPHPPTKENALLILNSLKPWQKTQMFFNWIKSQNLFPMETIFYNVAM 200

Query: 194 KSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCXXXXXXXXXXXXXXXXXXXXXXX 253
           KSLRYGRQFQ+IEDLANEMIS+GIELDNIT       XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 201 KSLRYGRQFQVIEDLANEMISSGIELDNITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 260

Query: 254 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 313
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 261 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 320

Query: 314 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 373
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 321 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 380

Query: 374 XXXXXXXXXXXXXXXXXXXXMDFILYNTLLNMCADLGLEEEAETLFEEMKKSKHSRPDSW 433
           XXXXXXXXXXXXXXXXXX  MDFILYNTLLNMCADLGLEEEAE LFEEMKKS++SRPDSW
Sbjct: 381 XXXXXXXXXXXXXXXXXXWPMDFILYNTLLNMCADLGLEEEAEKLFEEMKKSENSRPDSW 440

Query: 434 SYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCXXXXXXXXXXXXXXXXXXXXXXX 493
           SYTAMLNI+GSGGNVKRSMELFEEMLELGVEINVM C                 XXXXXX
Sbjct: 441 SYTAMLNIHGSGGNVKRSMELFEEMLELGVEINVMGCTCLIQCLGKARRIDDLVXXXXXX 500

Query: 494 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQANPKLVSFINLLQQNDITFEVVK 553
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    QQANP LV+FINLLQQN ITFEVVK
Sbjct: 501 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTCLQQANPNLVAFINLLQQNVITFEVVK 560

Query: 554 NEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLYPGLHNKTETEWC 613
            EFR ILGETA EARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLYPGLHNKTE+EWC
Sbjct: 561 EEFRKILGETATEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLYPGLHNKTESEWC 620

Query: 614 LDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRFSQGLANSFASHVD 673
           LDVRSLSVGAAQTALEEWM TLSKIVQREEALP+LLSAQTGAGTHRFSQGLANSFASHV+
Sbjct: 621 LDVRSLSVGAAQTALEEWMTTLSKIVQREEALPQLLSAQTGAGTHRFSQGLANSFASHVE 680

Query: 674 KLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAAT 710
           KLAAPF+LREDRAGWFVATREDLV+WVHSRVPSVAAT
Sbjct: 681 KLAAPFRLREDRAGWFVATREDLVSWVHSRVPSVAAT 715

[Close]
BLAST of CsaV3_3G001900 vs. NCBI nr
Match: XP_023552442.1 (pentatricopeptide repeat-containing protein At5g46580, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 653.3 bits (1684), Expect = 9.6e-184
Identity = 551/714 (77.17%), Postives = 574/714 (80.39%), Query Frame = 0 

Query: 1   MAVPLSSSLD--LKLKPT-PIFFTSPLRRKNVTKRLTLLC-SSSKSPRKPSSVSSQSVDN 60
           MA PLSSSLD  LKLKPT P+FFTSPLRR N TKRLT+LC SSSKSPR        S D 
Sbjct: 1   MAAPLSSSLDIKLKLKPTPPLFFTSPLRRNNFTKRLTVLCTSSSKSPR--------STDK 60

Query: 61  KNPSLSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPXXXXXXXXXXXXXXXXXXXXXX 120
           KNPSLSEQLK+LST+TLSNA NDE+ LLS  KS WVNP                      
Sbjct: 61  KNPSLSEQLKDLSTSTLSNASNDESHLLSNSKSIWVNPTKPKRSVLSLQRQKRSSYSYNP 120

Query: 121 XXXXXXXFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIK 180
                  FAHKLNA DSS +A+F+A L+EIPHPPTKENALLILNSL+PWQKTHLFFNWIK
Sbjct: 121 KMRELKTFAHKLNASDSS-EAAFMAVLKEIPHPPTKENALLILNSLKPWQKTHLFFNWIK 180

Query: 181 SQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCXXXXXXX 240
           +QNLFPMETIFYNVAMKSLRYGRQFQLIE+LANEMI+ GIELD          XXXXXXX
Sbjct: 181 TQNLFPMETIFYNVAMKSLRYGRQFQLIEELANEMINTGIELDXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDFILYNTLLNMCADLGLEEEAET 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        LLNMCADLGLEEEAE 
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNMCADLGLEEEAEK 420

Query: 421 LFEEMKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCXXXXXXX 480
           LFEEMKKS+HSRPDSWSYTAMLNI+GSGGNVKRSMELFEEMLELGV INVMCC       
Sbjct: 421 LFEEMKKSEHSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVGINVMCCTCLIQCL 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQANPKLVS 540
                                                              QQANPKLV+
Sbjct: 481 GKARRIDDLVRVFDVSIRKGVKPDDRFCGCLLSVVSLCDNNEDISKVFTCLQQANPKLVA 540

Query: 541 FINLLQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSL 600
           F+NLLQQNDITF+V+K+EFR ILGETA EARRPFCNCLIDICRNQNL +RAHELLYLGSL
Sbjct: 541 FVNLLQQNDITFDVIKDEFRTILGETASEARRPFCNCLIDICRNQNLSKRAHELLYLGSL 600

Query: 601 YGLYPGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGT 660
           YGLYPGLHNKTE EWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGT
Sbjct: 601 YGLYPGLHNKTEGEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGT 660

Query: 661 HRFSQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 711
           HRFSQGLANSFASHV+KLAAPF+LREDRAGWFVATRED V WVHSRVPSVA TA
Sbjct: 661 HRFSQGLANSFASHVEKLAAPFRLREDRAGWFVATREDFVAWVHSRVPSVATTA 705

[Close]
BLAST of CsaV3_3G001900 vs. TAIR10
Match: AT5G46580.1 (pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 480.3 bits (1235), Expect = 2.0e-135
Identity = 477/716 (66.62%), Postives = 554/716 (77.37%), Query Frame = 0 

Query: 1   MAVPLSSSLDLKLKPT-------PIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQS 60
           MA  L++++D+   P         +F    L R++ +++L + CSS K P+   ++  + 
Sbjct: 1   MATVLTTAIDVCFNPQNSDTKKHSLFLKPSLFRQSRSRKLNISCSSLKQPK---TLEEEP 60

Query: 61  VDNKNPSLSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPXXXXXXXXXXXXXXXXXXX 120
           +  K PSLSEQLK LS TTL     ++T++LSKPKS WVNP                   
Sbjct: 61  ITTKTPSLSEQLKPLSATTLR---QEQTQILSKPKSVWVNPTRPKRSVLSLQRQKRSAYS 120

Query: 121 XXXXXXXXXXFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFN 180
                     FA KLN+   ++ + F++ L+EIPHPP ++NALL+LNSLR WQKTH FFN
Sbjct: 121 YNPQIKDLRAFALKLNSSIFTEKSEFLSLLDEIPHPPNRDNALLVLNSLREWQKTHTFFN 180

Query: 181 WIKSQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCXXXX 240
           W+KS++LFPMETIFYNV MKSLR+GRQFQLIE++A EM+  G+ELDNITYSTIITC    
Sbjct: 181 WVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRC 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 NLYNKAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDFILYNTLLNMCADLGLEEE 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      MDFILYNTLLNMCAD+GLEEE
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAKKWPMDFILYNTLLNMCADIGLEEE 420

Query: 421 AETLFEEMKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCXXXX 480
           AE LF +MK+S   RPD++SYTAMLNIYGSGG  +++MELFEEML+ GV++NVM C  XX
Sbjct: 421 AERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQANPK 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            ++AN K
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSEDAEKVMACLERANKK 540

Query: 541 LVSFINLLQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYL 600
           LV+F+NL+      +E VK EF+ ++  T  EARRPFCNCLIDICR  N  ERAHELLYL
Sbjct: 541 LVTFVNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELLYL 600

Query: 601 GSLYGLYPGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTG 660
           G+L+GLYPGLHNKT  EW LDVRSLSVGAA+TALEEWM TL+ I++R+E LPEL  AQTG
Sbjct: 601 GTLFGLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFLAQTG 660

Query: 661 AGTHRFSQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAAT 710
            GTHRFSQGLANSFA H+ +L+APF+ + DR G FVAT+EDLV+W+ S+ P +  +
Sbjct: 661 TGTHRFSQGLANSFALHLQQLSAPFR-QSDRPGIFVATKEDLVSWLESKFPPLVTS 709

[Close]
BLAST of CsaV3_3G001900 vs. TAIR10
Match: AT4G16390.1 (pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 134.0 bits (336), Expect = 3.5e-31
Identity = 71/178 (39.89%), Postives = 104/178 (58.43%), Query Frame = 0 

Query: 528 QQANPKLVSFINLL-QQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRER 587
           ++A PKL   + +L ++ +    V K E   ++     + ++ + NCLID+C N N  ER
Sbjct: 517 EKAKPKLGQVVKMLVEEQNCEEGVFKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLER 576

Query: 588 AHELLYLGSLYGLYPGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSK-IVQREEALP 647
           A E+L LG  Y +Y GL +K+ T+W L ++SLS+GAA TAL  WM  LS+  ++  E  P
Sbjct: 577 ACEILQLGLEYDIYTGLQSKSATQWSLHLKSLSLGAALTALHVWMNDLSEAALESGEEFP 636

Query: 648 ELLSAQTGAGTHRFS-QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSR 703
            LL   TG G H++S +GLA  F SH+ +L APF    D+ GWF+ T      W+ SR
Sbjct: 637 PLLGINTGHGKHKYSDKGLAAVFESHLKELNAPFHEAPDKVGWFLTTSVAAKAWLESR 694

[Close]
BLAST of CsaV3_3G001900 vs. TAIR10
Match: AT2G31400.1 (genomes uncoupled 1)

HSP 1 Score: 48.9 bits (115), Expect = 1.5e-05
Identity = 28/91 (30.77%), Postives = 45/91 (49.45%), Query Frame = 0 

Query: 612 CLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRFSQG---LANSFA 671
           CLD+  +S GAA+  +  W++ +  IV     LP++LS  TG G H    G   L  +  
Sbjct: 783 CLDLHLMSSGAARAMVHAWLLNIRSIVYEGHELPKVLSILTGWGKHSKVVGDGALRRAVE 842

Query: 672 SHVDKLAAPFQLREDRAGWFVATREDLVTWV 700
             +  + APF L +   G F ++   + TW+
Sbjct: 843 VLLRGMDAPFHLSKCNMGRFTSSGSVVATWL 873

[Close]
BLAST of CsaV3_3G001900 vs. TAIR10
Match: AT1G74630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 47.4 bits (111), Expect = 4.4e-05
Identity = 22/64 (34.38%), Postives = 37/64 (57.81%), Query Frame = 0 

Query: 394 DFILYNTLLNMCADLGLEEEAETLFEEMKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMEL 453
           D I + +LL+ C+  GL EE E  F EMK+  H  P+   Y  M+++YG  G ++++ + 
Sbjct: 370 DGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDF 429

Query: 454 FEEM 458
             +M
Sbjct: 430 ICQM 433

[Close]
BLAST of CsaV3_3G001900 vs. TAIR10
Match: AT1G74850.1 (plastid transcriptionally active 2)

HSP 1 Score: 47.0 bits (110), Expect = 5.7e-05
Identity = 35/142 (24.65%), Postives = 61/142 (42.96%), Query Frame = 0 

Query: 570 FCNCLIDICRNQNLRERAHELLYLGSLYGLYPGLHNKTETEWCLDVRSLSVGAAQTALEE 629
           F N L+D       +ERA  +L   +  GL+P L  K +  W +DV  +S G   TAL  
Sbjct: 670 FYNALLDALWWLGQKERAARVLNEATKRGLFPELFRKNKLVWSVDVHRMSEGGMYTALSV 729

Query: 630 WMITLSKIVQREEALPELLSAQTGAGTHRFSQGLANS------FASHVDKLAAPFQLRED 689
           W+  ++ ++ + + LP+L    +  G    S     S      F+   D +++ F     
Sbjct: 730 WLNDINDMLLKGD-LPQLAVVVSVRGQLEKSSAARESPIAKAAFSFLQDHVSSSFSFTGW 789

Query: 690 RAGWFVATREDLVTWVHSRVPS 706
             G  +  R  L   + ++ P+
Sbjct: 790 NGGRIMCQRSQLKQLLSTKEPT 810

[Close]
BLAST of CsaV3_3G001900 vs. Swiss-Prot
Match: sp|Q9LS25|PP420_ARATH (Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g46580 PE=2 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 3.6e-134
Identity = 477/716 (66.62%), Postives = 554/716 (77.37%), Query Frame = 0 

Query: 1   MAVPLSSSLDLKLKPT-------PIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQS 60
           MA  L++++D+   P         +F    L R++ +++L + CSS K P+   ++  + 
Sbjct: 1   MATVLTTAIDVCFNPQNSDTKKHSLFLKPSLFRQSRSRKLNISCSSLKQPK---TLEEEP 60

Query: 61  VDNKNPSLSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPXXXXXXXXXXXXXXXXXXX 120
           +  K PSLSEQLK LS TTL     ++T++LSKPKS WVNP                   
Sbjct: 61  ITTKTPSLSEQLKPLSATTLR---QEQTQILSKPKSVWVNPTRPKRSVLSLQRQKRSAYS 120

Query: 121 XXXXXXXXXXFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFN 180
                     FA KLN+   ++ + F++ L+EIPHPP ++NALL+LNSLR WQKTH FFN
Sbjct: 121 YNPQIKDLRAFALKLNSSIFTEKSEFLSLLDEIPHPPNRDNALLVLNSLREWQKTHTFFN 180

Query: 181 WIKSQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCXXXX 240
           W+KS++LFPMETIFYNV MKSLR+GRQFQLIE++A EM+  G+ELDNITYSTIITC    
Sbjct: 181 WVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRC 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 NLYNKAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDFILYNTLLNMCADLGLEEE 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      MDFILYNTLLNMCAD+GLEEE
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAKKWPMDFILYNTLLNMCADIGLEEE 420

Query: 421 AETLFEEMKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCXXXX 480
           AE LF +MK+S   RPD++SYTAMLNIYGSGG  +++MELFEEML+ GV++NVM C  XX
Sbjct: 421 AERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQANPK 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            ++AN K
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSEDAEKVMACLERANKK 540

Query: 541 LVSFINLLQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYL 600
           LV+F+NL+      +E VK EF+ ++  T  EARRPFCNCLIDICR  N  ERAHELLYL
Sbjct: 541 LVTFVNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELLYL 600

Query: 601 GSLYGLYPGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTG 660
           G+L+GLYPGLHNKT  EW LDVRSLSVGAA+TALEEWM TL+ I++R+E LPEL  AQTG
Sbjct: 601 GTLFGLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFLAQTG 660

Query: 661 AGTHRFSQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAAT 710
            GTHRFSQGLANSFA H+ +L+APF+ + DR G FVAT+EDLV+W+ S+ P +  +
Sbjct: 661 TGTHRFSQGLANSFALHLQQLSAPFR-QSDRPGIFVATKEDLVSWLESKFPPLVTS 709

[Close]
BLAST of CsaV3_3G001900 vs. Swiss-Prot
Match: sp|B4F8Z1|ATP4_MAIZE (Pentatricopeptide repeat-containing protein ATP4, chloroplastic OS=Zea mays OX=4577 GN=ATP4 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 2.9e-30
Identity = 85/286 (29.72%), Postives = 127/286 (44.41%), Query Frame = 0 

Query: 426 HSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCXXXXXXXXXXXXXXXX 485
           HS+PDSWSY++M+ +Y S  NV  +  +  EM+E G + N+                   
Sbjct: 407 HSKPDSWSYSSMVTLYSSTANVLSAEGILNEMVEAGFKPNIF-VLTSLIRCYGKVGRTDD 466

Query: 486 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQANPKLVSFINLLQQND 545
                                                     +++N +L + + LL    
Sbjct: 467 VVRSFGMLQDLGIIPDDRFCGCLLSVAANTPAEELGKVISCIERSNVQLGAVVKLLVDRS 526

Query: 546 ITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLYPGLHN 605
            + E  +   R +L  +    + P+CNCL+D+C N N  E+A  LL      G+Y  +  
Sbjct: 527 -SSESFREAARELLRSSRGVVKMPYCNCLMDLCVNLNQMEKACALLDAAQQLGIYANIQT 586

Query: 606 KTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQR-EEALPELLSAQTGAGTHRFS-QGL 665
           +T+T+W L +R LSVGAA T L  WM  L   +Q   E LP LL   TG G + +S +GL
Sbjct: 587 RTQTQWSLHLRGLSVGAALTTLHVWMNDLYTSLQTGNEGLPPLLGIHTGQGKNTYSDRGL 646

Query: 666 ANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAAT 710
           A  F +H+ +L APF    D+AGWF+ T      W+ S+  S   T
Sbjct: 647 AAMFEAHLKELDAPFHEAPDKAGWFLTTNVAAKQWLESKAASELVT 690

[Close]
BLAST of CsaV3_3G001900 vs. Swiss-Prot
Match: sp|Q8GWE0|PP314_ARATH (Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=P67 PE=1 SV=3)

HSP 1 Score: 134.0 bits (336), Expect = 6.4e-30
Identity = 71/178 (39.89%), Postives = 104/178 (58.43%), Query Frame = 0 

Query: 528 QQANPKLVSFINLL-QQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRER 587
           ++A PKL   + +L ++ +    V K E   ++     + ++ + NCLID+C N N  ER
Sbjct: 517 EKAKPKLGQVVKMLVEEQNCEEGVFKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLER 576

Query: 588 AHELLYLGSLYGLYPGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSK-IVQREEALP 647
           A E+L LG  Y +Y GL +K+ T+W L ++SLS+GAA TAL  WM  LS+  ++  E  P
Sbjct: 577 ACEILQLGLEYDIYTGLQSKSATQWSLHLKSLSLGAALTALHVWMNDLSEAALESGEEFP 636

Query: 648 ELLSAQTGAGTHRFS-QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSR 703
            LL   TG G H++S +GLA  F SH+ +L APF    D+ GWF+ T      W+ SR
Sbjct: 637 PLLGINTGHGKHKYSDKGLAAVFESHLKELNAPFHEAPDKVGWFLTTSVAAKAWLESR 694

[Close]
BLAST of CsaV3_3G001900 vs. Swiss-Prot
Match: sp|Q10PZ4|ATP4_ORYSJ (Pentatricopeptide repeat-containing protein ATP4 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0215900 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 4.6e-28
Identity = 79/277 (28.52%), Postives = 122/277 (44.04%), Query Frame = 0 

Query: 427 SRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCXXXXXXXXXXXXXXXXX 486
           S+PDSWSY++M+ +Y   GNV  +  +  EM+E G + N+                    
Sbjct: 393 SKPDSWSYSSMVTLYSCTGNVAGAEGILNEMVEAGFKPNIF-ILTSLIRCYGKAGRTDDV 452

Query: 487 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQANPKLVSFINLLQQNDI 546
                                                     +++ +L + + LL     
Sbjct: 453 VRSFAMLEDLGITPDDRFCGCLLTVAAGTPADELGKVIGCIDRSSAQLGAVVRLLVDAAA 512

Query: 547 TFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLYPGLHNK 606
             E ++     +LG      R P+CNCL+D+  N +  E+A  LL +    G+Y  +  +
Sbjct: 513 PSEPLREAAGELLGGARGVVRMPYCNCLMDLAVNLSQMEKACALLDVALRLGIYSNVQTR 572

Query: 607 TETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRFS-QGLAN 666
           T+T+W L +R LSVGAA T L  WM  L   +Q  + LP LL   TG G + +S +GLA 
Sbjct: 573 TQTQWSLHLRGLSVGAALTTLHVWMSDLYAALQAGDELPPLLGIHTGQGKNTYSYKGLAT 632

Query: 667 SFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSR 703
            F SH+ +L APF    D+AGWF+ T      W+ ++
Sbjct: 633 VFESHLKELDAPFHEAPDKAGWFLTTSVAARHWLETK 668

[Close]
BLAST of CsaV3_3G001900 vs. Swiss-Prot
Match: sp|Q9SIC9|PP178_ARATH (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g31400 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 2.7e-04
Identity = 28/91 (30.77%), Postives = 45/91 (49.45%), Query Frame = 0 

Query: 612 CLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRFSQG---LANSFA 671
           CLD+  +S GAA+  +  W++ +  IV     LP++LS  TG G H    G   L  +  
Sbjct: 783 CLDLHLMSSGAARAMVHAWLLNIRSIVYEGHELPKVLSILTGWGKHSKVVGDGALRRAVE 842

Query: 672 SHVDKLAAPFQLREDRAGWFVATREDLVTWV 700
             +  + APF L +   G F ++   + TW+
Sbjct: 843 VLLRGMDAPFHLSKCNMGRFTSSGSVVATWL 873

[Close]
BLAST of CsaV3_3G001900 vs. TrEMBL
Match: tr|A0A0A0L6K8|A0A0A0L6K8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011820 PE=4 SV=1)

HSP 1 Score: 817.4 bits (2110), Expect = 2.5e-233
Identity = 710/710 (100.00%), Postives = 710/710 (100.00%), Query Frame = 0 

Query: 1   MAVPLSSSLDLKLKPTPIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVDNKNPS 60
           MAVPLSSSLDLKLKPTPIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVDNKNPS
Sbjct: 1   MAVPLSSSLDLKLKPTPIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVDNKNPS 60

Query: 61  LSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           LSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  LSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQNL 180
           XXXFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQNL
Sbjct: 121 XXXFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQNL 180

Query: 181 FPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCXXXXXXXXXXX 240
           FPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCXXXXXXXXXXX
Sbjct: 181 FPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDFILYNTLLNMCADLGLEEEAETLFEE 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDFILYNTLLNMCADLGLEEEAETLFEE
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDFILYNTLLNMCADLGLEEEAETLFEE 420

Query: 421 MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCXXXXXXXXXXX 480
           MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCXXXXXXXXXXX
Sbjct: 421 MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQANPKLVSFINL 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQANPKLVSFINL
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQANPKLVSFINL 540

Query: 541 LQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY 600
           LQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY
Sbjct: 541 LQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY 600

Query: 601 PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRFS 660
           PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRFS
Sbjct: 601 PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRFS 660

Query: 661 QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 711
           QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA
Sbjct: 661 QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 710

[Close]
BLAST of CsaV3_3G001900 vs. TrEMBL
Match: tr|A0A1S3BKZ1|A0A1S3BKZ1_CUCME (pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490799 PE=4 SV=1)

HSP 1 Score: 780.8 bits (2015), Expect = 2.6e-222
Identity = 686/710 (96.62%), Postives = 698/710 (98.31%), Query Frame = 0 

Query: 1   MAVPLSSSLDLKLKPTPIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVDNKNPS 60
           MA PLSSSLD KLKPTPIFFTS LRRK V KRLTLLCSSSKSPRKPSS+SS+S+DNKNPS
Sbjct: 1   MAAPLSSSLDFKLKPTPIFFTSLLRRKYVNKRLTLLCSSSKSPRKPSSISSESIDNKNPS 60

Query: 61  LSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           LS+QLKNLSTTTLSNAPNDETRLLSKPKSTWVNPXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  LSDQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQNL 180
           XXXFAHKLNACDSSD+ASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIK+QNL
Sbjct: 121 XXXFAHKLNACDSSDEASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQNL 180

Query: 181 FPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCXXXXXXXXXXX 240
           FPMETIFYNVAMKSLRYGRQFQLIEDLAN+M+S GIELDNITYSTIITC XXXXXXXXXX
Sbjct: 181 FPMETIFYNVAMKSLRYGRQFQLIEDLANDMVSTGIELDNITYSTIITCAXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDFILYNTLLNMCADLGLEEEAETLFEE 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDFILYNTLLNMCADLGLEEEAE LFEE
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDFILYNTLLNMCADLGLEEEAEKLFEE 420

Query: 421 MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCXXXXXXXXXXX 480
           MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEML+LGVEINVMCCXXXXXXXXXXX
Sbjct: 421 MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLKLGVEINVMCCXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQANPKLVSFINL 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQANPKLVSF+NL
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQANPKLVSFVNL 540

Query: 541 LQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY 600
           LQQN ITFEV+KNEFRNIL ETA EARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY
Sbjct: 541 LQQNSITFEVIKNEFRNILSETASEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY 600

Query: 601 PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRFS 660
           PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQR+EALPELLSAQTGAGTHRFS
Sbjct: 601 PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQRKEALPELLSAQTGAGTHRFS 660

Query: 661 QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 711
           QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSV ATA
Sbjct: 661 QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVPATA 710

[Close]
BLAST of CsaV3_3G001900 vs. TrEMBL
Match: tr|A0A2N9HET5|A0A2N9HET5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40728 PE=4 SV=1)

HSP 1 Score: 541.2 bits (1393), Expect = 3.5e-150
Identity = 549/716 (76.68%), Postives = 594/716 (82.96%), Query Frame = 0 

Query: 1   MAVPLSSSLD------LKLKPTPIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSV 60
           MA  LS++LD      L     PI F SP  R++ TKR T+ C+SSKSP K S   S+  
Sbjct: 1   MATALSTALDVHFTGHLSDTKRPIIFNSPF-RQHTTKRSTIFCNSSKSPPKASPKLSEPT 60

Query: 61  DNKNPSLSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPXXXXXXXXXXXXXXXXXXXX 120
             K      QLK LSTTTLS    D+T LLSKPKSTWVNPXXXXXXXXXXXXXXXX    
Sbjct: 61  -QKXXXXXXQLKPLSTTTLSKPTKDQTHLLSKPKSTWVNPXXXXXXXXXXXXXXXXSYSY 120

Query: 121 XXXXXXXXXFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNW 180
                    FA +LN CD+S +A+F++ L+E PHPPT+ENALLILNSL+PWQKTHLFFNW
Sbjct: 121 NPQLTELKRFAQRLNDCDNS-EAAFLSLLQENPHPPTRENALLILNSLKPWQKTHLFFNW 180

Query: 181 IKSQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCXXXXX 240
           IK+QN FP+ETIFYNV MKSLR+GRQF+LIE LANEMI+  IELDNITY TIITC     
Sbjct: 181 IKTQNFFPLETIFYNVTMKSLRFGRQFELIEGLANEMINNQIELDNITYCTIITCAKKCN 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 HFDKAVEWFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDFILYNTLLNMCADLGLEEEA 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   ILYNTLLNMCADL LEEEA
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLILYNTLLNMCADLALEEEA 420

Query: 421 ETLFEEMKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCXXXXX 480
           E LFE+MK+ +H RPDSWSYTAML IYGSGGNV ++MELFEEM ELGV++NVM CXXXXX
Sbjct: 421 EQLFEDMKRLEHCRPDSWSYTAMLKIYGSGGNVDKAMELFEEMSELGVKLNVMGCXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQANPKL 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    QQANPKL
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLACLQQANPKL 540

Query: 541 VSFINLLQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLG 600
           ++ + L+ +   +FE VK EFR IL ETA EARRPFCNCLIDICRN+ L ERAHELLYLG
Sbjct: 541 IALVKLVTEEKTSFETVKEEFRGILSETAVEARRPFCNCLIDICRNRKLHERAHELLYLG 600

Query: 601 SLYGLYPGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGA 660
           +LYGLYPGLHNKT  EWCLDVRSLSVGAA TALEEWM TLSKIVQR+E LPE+LSAQTGA
Sbjct: 601 TLYGLYPGLHNKTVHEWCLDVRSLSVGAALTALEEWMGTLSKIVQRKEELPEILSAQTGA 660

Query: 661 GTHRFSQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 711
           GTH+FSQGLANSFASHV KLAAPF+  E++ G FVATREDLV+WV SR+ S A  A
Sbjct: 661 GTHKFSQGLANSFASHVKKLAAPFRQSEEKIGCFVATREDLVSWVQSRLASSAVRA 713

[Close]
BLAST of CsaV3_3G001900 vs. TrEMBL
Match: tr|A0A068UX37|A0A068UX37_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00037715001 PE=4 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 6.8e-146
Identity = 464/695 (66.76%), Postives = 521/695 (74.96%), Query Frame = 0 

Query: 17  PIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVDNKNPSLSEQLKNLSTTTLSNA 76
           P F  SPLR    TKR T+ C+SSKSP K +   ++S   K PSLSEQLK LS T LS+ 
Sbjct: 26  PHFTASPLRIS--TKRFTIFCTSSKSPPKTAPGKAESKKRKTPSLSEQLKPLSNTILSDQ 85

Query: 77  PNDETRLLSKPKSTWVNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAHKLNACDSSDD 136
           PN+  +LLSKPKS WVNP                             FA KLN C  +DD
Sbjct: 86  PNESHQLLSKPKSIWVNPTKPKPSVLSLQRQKRSSYSYNPQIRDLKHFAKKLNDCHPADD 145

Query: 137 ASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQNLFPMETIFYNVAMKSLR 196
           A+F A LEEIPHPP ++NALL+LNSLR WQKT LFFNWIK+ NLFP+ETIFYNV MKSLR
Sbjct: 146 AAFQAILEEIPHPPNRDNALLVLNSLRSWQKTLLFFNWIKTLNLFPLETIFYNVTMKSLR 205

Query: 197 YGRQFQLIEDLANEMISAGIELDNITYSTIITCXXXXXXXXXXXXXXXXXXXXXXXXXXX 256
           +GRQFQ +E+LANEMI  G+ELDNITYSTIITC      XXXXXXXXXXXXXXXXXXXXX
Sbjct: 206 FGRQFQHMENLANEMIENGVELDNITYSTIITCAKRCNLXXXXXXXXXXXXXXXXXXXXX 265

Query: 257 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 316
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 266 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 325

Query: 317 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 376
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 326 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 385

Query: 377 XXXXXXXXXXXXXXXXMDFILYNTLLNMCADLGLEEEAETLFEEMKKSKHSRPDSWSYTA 436
           XXXXXXXXXXX     +DFILYN+LL+MCADLGLEEEAE+LFE+MK S+  +PDSWSYTA
Sbjct: 386 XXXXXXXXXXXLNGWPVDFILYNSLLSMCADLGLEEEAESLFEDMKGSESRKPDSWSYTA 445

Query: 437 MLNIYGSGGNVKRSMELFEEMLELGVEINVMCCXXXXXXXXXXXXXXXXXXXXXXXXXXX 496
           MLNIYGSGGN  ++M +FEEM + GVE+NVM C                           
Sbjct: 446 MLNIYGSGGNADKAMRMFEEMSDKGVELNVMGCTCLIQCLGRAKRIDDLVQVFESSVDGG 505

Query: 497 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQANPKLVSFINLLQQNDITFEVVKNEFR 556
                                           +AN  LV+FI  L++ D  FE VK EF+
Sbjct: 506 GIKPDDRLCGCLLSVVSYCEGEDVNKVLACLHKANQNLVAFIKSLEEEDTKFENVKQEFK 565

Query: 557 NILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLYPGLHNKTETEWCLDVR 616
            IL  TA +ARRPFCNCLIDICRN+NLRERAHELLYLG++YGLYPGLH +TE EW L+VR
Sbjct: 566 GILSNTAVDARRPFCNCLIDICRNRNLRERAHELLYLGTMYGLYPGLHTRTEEEWRLNVR 625

Query: 617 SLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRFSQGLANSFASHVDKLAA 676
           SLSVGAA TALEEWM TL+K+VQR EALPE+LSA TGAG+H++SQGLAN+FASH +KLAA
Sbjct: 626 SLSVGAAHTALEEWMQTLTKLVQRREALPEVLSASTGAGSHKYSQGLANAFASHAEKLAA 685

Query: 677 PFQLREDRA-GWFVATREDLVTWVHSRVPSVAATA 711
           PF+LRED+A G FVATRED+++WV SR  S+A+ A
Sbjct: 686 PFKLREDKAGGLFVATREDVISWVQSRAASLASIA 718

[Close]
BLAST of CsaV3_3G001900 vs. TrEMBL
Match: tr|A0A2C9U4Z5|A0A2C9U4Z5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G013500 PE=4 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.7e-144
Identity = 427/719 (59.39%), Postives = 493/719 (68.57%), Query Frame = 0 

Query: 1   MAVPLSSSLDLKL------KPTPIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSV 60
           MA  LS++ D  L      K  PIFFT+P+R+    KRLT+ C+SS+S  K S    +S+
Sbjct: 1   MASNLSAAPDFHLTIPQSDKRRPIFFTAPIRQNLTKKRLTISCNSSRSSPKSSRNLKESL 60

Query: 61  DNKNPSLSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPXXXXXXXXXXXXXXXXXXXX 120
           + KNPSLS+QLK LS TTLS   ++ T LLSKPKSTWVNP                    
Sbjct: 61  NPKNPSLSDQLKPLSATTLSTTEDNRTHLLSKPKSTWVNPTKPRKSVLSLQRQKRSPYSL 120

Query: 121 XXXXXXXXXFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNW 180
                    FA KLN CDSS++ +F++ LE+IP+P T+ENALLILNSL+PWQK HLFFNW
Sbjct: 121 NPIVKELRLFAQKLNDCDSSNETTFLSLLEQIPYPLTRENALLILNSLKPWQKAHLFFNW 180

Query: 181 IKSQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANE--------MISAGIELDNITYSTI 240
           IK+QN FPMETIFYNV MKSLR+GRQF+LI++LANE        M   G+  D +TYS +
Sbjct: 181 IKTQNSFPMETIFYNVVMKSLRFGRQFELIDNLANEMALEWFERMYKTGLMPDEVTYSAV 240

Query: 241 ITCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           +                                             XXXXXXXXXXXXXX
Sbjct: 241 L-----------------------------------DVYAKLGKVEXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDFILYNTLLNMCA 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     MDFIL+NTLL+MCA
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNDWPMDFILFNTLLSMCA 420

Query: 421 DLGLEEEAETLFEEMKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINV 480
           DLG+EEEAE LFE+MK+S+H RPDSWSYTAMLNIYGSGGN  ++M+LFEEM +LGV+INV
Sbjct: 421 DLGMEEEAERLFEDMKRSEHCRPDSWSYTAMLNIYGSGGNASKAMDLFEEMSKLGVDINV 480

Query: 481 MCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           M C                                                         
Sbjct: 481 MGCTCLIQCLGKSRRIDDLVRVFNVSIERGVNPDDRLCGCLLSVVSLCEESEDANRVLAC 540

Query: 541 XQQANPKLVSFINLLQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRER 600
            QQANP+LV+ + L+++   ++E VK EFR I+G+TA EARRPFCNCLIDICR++NL  R
Sbjct: 541 LQQANPRLVALVRLIEEEKTSYETVKEEFRVIVGDTAVEARRPFCNCLIDICRSRNLHGR 600

Query: 601 AHELLYLGSLYGLYPGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPE 660
           AHELLYLG+LYGLYP LH+KT  EW LDVRSLSVGAA TALEEWM TL+K VQR EALPE
Sbjct: 601 AHELLYLGTLYGLYPDLHHKTADEWSLDVRSLSVGAAHTALEEWMGTLTKFVQRNEALPE 660

Query: 661 LLSAQTGAGTHRFSQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPS 706
           + SA TG GTHRFSQGLAN+FA+HV+KL+APF+  E+RAG FVATR+DLVTWV SR PS
Sbjct: 661 MFSAHTGTGTHRFSQGLANAFAAHVEKLSAPFRQCEERAGCFVATRDDLVTWVRSRSPS 684

The following BLAST results are available for this feature:
BLAST of CsaV3_3G001900 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004148730.13.8e-233100.00PREDICTED: pentatricopeptide repeat-containing protein At5g46580, chloroplastic ... [more]
XP_008448710.14.0e-22296.62PREDICTED: pentatricopeptide repeat-containing protein At5g46580, chloroplastic ... [more]
XP_023007724.15.8e-18977.76pentatricopeptide repeat-containing protein At5g46580, chloroplastic-like [Cucur... [more]
XP_022145326.14.1e-18788.24pentatricopeptide repeat-containing protein At5g46580, chloroplastic [Momordica ... [more]
XP_023552442.19.6e-18477.17pentatricopeptide repeat-containing protein At5g46580, chloroplastic-like [Cucur... [more]
BLAST of CsaV3_3G001900 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G46580.12.0e-13566.62pentatricopeptide (PPR) repeat-containing protein[more]
AT4G16390.13.5e-3139.89pentatricopeptide (PPR) repeat-containing protein[more]
AT2G31400.11.5e-0530.77genomes uncoupled 1[more]
AT1G74630.14.4e-0534.38Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G74850.15.7e-0524.65plastid transcriptionally active 2[more]
BLAST of CsaV3_3G001900 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LS25|PP420_ARATH3.6e-13466.62Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidop... [more]
sp|B4F8Z1|ATP4_MAIZE2.9e-3029.72Pentatricopeptide repeat-containing protein ATP4, chloroplastic OS=Zea mays OX=4... [more]
sp|Q8GWE0|PP314_ARATH6.4e-3039.89Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidop... [more]
sp|Q10PZ4|ATP4_ORYSJ4.6e-2828.52Pentatricopeptide repeat-containing protein ATP4 homolog, chloroplastic OS=Oryza... [more]
sp|Q9SIC9|PP178_ARATH2.7e-0430.77Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidop... [more]
BLAST of CsaV3_3G001900 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L6K8|A0A0A0L6K8_CUCSA2.5e-233100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011820 PE=4 SV=1[more]
tr|A0A1S3BKZ1|A0A1S3BKZ1_CUCME2.6e-22296.62pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Cucumis ... [more]
tr|A0A2N9HET5|A0A2N9HET5_FAGSY3.5e-15076.68Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40728 PE=4 SV=1[more]
tr|A0A068UX37|A0A068UX37_COFCA6.8e-14666.76Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00037715001 PE=4 ... [more]
tr|A0A2C9U4Z5|A0A2C9U4Z5_MANES1.7e-14459.39Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G013500 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR002625Smr_dom
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0045036 protein targeting to chloroplast
biological_process GO:0010103 stomatal complex morphogenesis
cellular_component GO:0005575 cellular_component
cellular_component GO:0009507 chloroplast
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G001900.1CsaV3_3G001900.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 362..394
e-value: 3.3E-5
score: 21.8
coord: 256..289
e-value: 1.2E-4
score: 20.0
coord: 433..466
e-value: 3.2E-6
score: 24.9
coord: 326..360
e-value: 1.7E-9
score: 35.2
coord: 468..500
e-value: 1.5E-5
score: 22.8
coord: 397..430
e-value: 1.7E-6
score: 25.8
coord: 221..255
e-value: 6.1E-6
score: 24.1
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 453..499
e-value: 0.005
score: 16.8
coord: 208..266
e-value: 1.4E-8
score: 34.6
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 396..439
e-value: 5.3E-8
score: 32.8
coord: 323..368
e-value: 1.9E-11
score: 43.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 430..464
score: 11.192
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 219..253
score: 11.17
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 184..218
score: 6.555
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 465..499
score: 9.931
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 359..393
score: 9.799
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 289..323
score: 9.032
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 394..428
score: 10.468
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 324..358
score: 12.759
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 254..288
score: 11.148
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 410..544
e-value: 2.0E-25
score: 91.2
coord: 298..409
e-value: 7.9E-27
score: 95.7
coord: 153..273
e-value: 2.0E-21
score: 78.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..107
NoneNo IPR availablePANTHERPTHR24015:SF357SUBFAMILY NOT NAMEDcoord: 17..691
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 17..691
NoneNo IPR availableSUPERFAMILYSSF81901HCP-likecoord: 358..463
coord: 234..321
IPR002625Smr domainPROSITEPS50828SMRcoord: 613..696
score: 9.87

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G001900Cucsa.321700Cucumber (Gy14) v1cgycucB499
CsaV3_3G001900Cp4.1LG14g08800Cucurbita pepo (Zucchini)cpecucB0246
CsaV3_3G001900Carg12081Silver-seed gourdcarcucB0599
CsaV3_3G001900Cla008788Watermelon (97103) v1cucwmB209
CsaV3_3G001900MELO3C013863Melon (DHL92) v3.5.1cucmeB246
CsaV3_3G001900ClCG10G001810Watermelon (Charleston Gray)cucwcgB194
CsaV3_3G001900Lsi07G012170Bottle gourd (USVL1VR-Ls)cuclsiB250
CsaV3_3G001900MELO3C013863.2Melon (DHL92) v3.6.1cucmedB231
CsaV3_3G001900Cla97C10G186420Watermelon (97103) v2cucwmbB182
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G001900Cucumber (Chinese Long) v3cuccucB109
CsaV3_3G001900Cucumber (Chinese Long) v3cuccucB113
CsaV3_3G001900Silver-seed gourdcarcucB0745
CsaV3_3G001900Silver-seed gourdcarcucB0821
CsaV3_3G001900Cucumber (Gy14) v2cgybcucB117
CsaV3_3G001900Cucumber (Gy14) v2cgybcucB119
CsaV3_3G001900Cucumber (Gy14) v2cgybcucB123
CsaV3_3G001900Cucumber (Gy14) v1cgycucB390
CsaV3_3G001900Cucumber (Gy14) v1cgycucB488
CsaV3_3G001900Cucurbita maxima (Rimu)cmacucB0297
CsaV3_3G001900Cucurbita maxima (Rimu)cmacucB0372
CsaV3_3G001900Cucurbita maxima (Rimu)cmacucB0626
CsaV3_3G001900Cucurbita maxima (Rimu)cmacucB0718
CsaV3_3G001900Cucurbita maxima (Rimu)cmacucB0975
CsaV3_3G001900Cucurbita moschata (Rifu)cmocucB0288
CsaV3_3G001900Cucurbita moschata (Rifu)cmocucB0371
CsaV3_3G001900Cucurbita moschata (Rifu)cmocucB0609
CsaV3_3G001900Cucurbita moschata (Rifu)cmocucB0705
CsaV3_3G001900Cucurbita moschata (Rifu)cmocucB0961
CsaV3_3G001900Cucurbita pepo (Zucchini)cpecucB0309
CsaV3_3G001900Cucurbita pepo (Zucchini)cpecucB0764
CsaV3_3G001900Cucurbita pepo (Zucchini)cpecucB0895
CsaV3_3G001900Wild cucumber (PI 183967)cpicucB147
CsaV3_3G001900Wild cucumber (PI 183967)cpicucB144
CsaV3_3G001900Wild cucumber (PI 183967)cpicucB151
CsaV3_3G001900Bottle gourd (USVL1VR-Ls)cuclsiB244
CsaV3_3G001900Melon (DHL92) v3.5.1cucmeB222
CsaV3_3G001900Melon (DHL92) v3.5.1cucmeB244
CsaV3_3G001900Melon (DHL92) v3.6.1cucmedB215
CsaV3_3G001900Melon (DHL92) v3.6.1cucmedB243
CsaV3_3G001900Watermelon (Charleston Gray)cucwcgB184
CsaV3_3G001900Watermelon (Charleston Gray)cucwcgB232
CsaV3_3G001900Watermelon (97103) v1cucwmB193
CsaV3_3G001900Watermelon (97103) v1cucwmB249
CsaV3_3G001900Watermelon (97103) v2cucwmbB255
CsaV3_3G001900Wax gourdcucwgoB242
CsaV3_3G001900Wax gourdcucwgoB315