CsaV3_3G001530 (gene) Cucumber (Chinese Long) v3

NameCsaV3_3G001530
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3 : 1173478 .. 1173720 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCGGTTATTCAGATCTGAGTACACAACCTGAGGTCGCTCAAAGTGTGAATTCGCCAAACTAAAGCAGAATGACTCGTTTGCGAGTGGTTGTCAACTAACACAAGGTGGTGTTCGCGCCGACGACAATCTGTCCGTTCGAGGATCCAGGTTGTAGCGTCGAGAGAATTGCACGCTGCTGCTTGGCTAGAACCGCCGGAGAATTCGACGTCGATCGTAAATGCACGCCGGAATCTCGTTGA

mRNA sequence

ATGTTCGGTTATTCAGATCTGAGTACACAACCTGAGGTGGTGTTCGCGCCGACGACAATCTGTCCGTTCGAGGATCCAGGTTGTAGCGTCGAGAGAATTGCACGCTGCTGCTTGGCTAGAACCGCCGGAGAATTCGACGTCGATCGTAAATGCACGCCGGAATCTCGTTGA

Coding sequence (CDS)

ATGTTCGGTTATTCAGATCTGAGTACACAACCTGAGGTGGTGTTCGCGCCGACGACAATCTGTCCGTTCGAGGATCCAGGTTGTAGCGTCGAGAGAATTGCACGCTGCTGCTTGGCTAGAACCGCCGGAGAATTCGACGTCGATCGTAAATGCACGCCGGAATCTCGTTGA

Protein sequence

MFGYSDLSTQPEVVFAPTTICPFEDPGCSVERIARCCLARTAGEFDVDRKCTPESR
BLAST of CsaV3_3G001530 vs. NCBI nr
Match: KGN55737.1 (hypothetical protein Csa_3G009430 [Cucumis sativus])

HSP 1 Score: 125.2 bits (313), Expect = 7.3e-26
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0

Query: 1  MFGYSDLSTQPEVVFAPTTICPFEDPGCSVERIARCCLARTAGEFDVDRKCTPESR 57
          MFGYSDLSTQPEVVFAPTTICPFEDPGCSVERIARCCLARTAGEFDVDRKCTPESR
Sbjct: 1  MFGYSDLSTQPEVVFAPTTICPFEDPGCSVERIARCCLARTAGEFDVDRKCTPESR 56

BLAST of CsaV3_3G001530 vs. TrEMBL
Match: tr|A0A0A0L551|A0A0A0L551_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009430 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 4.8e-26
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0

Query: 1  MFGYSDLSTQPEVVFAPTTICPFEDPGCSVERIARCCLARTAGEFDVDRKCTPESR 57
          MFGYSDLSTQPEVVFAPTTICPFEDPGCSVERIARCCLARTAGEFDVDRKCTPESR
Sbjct: 1  MFGYSDLSTQPEVVFAPTTICPFEDPGCSVERIARCCLARTAGEFDVDRKCTPESR 56

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN55737.17.3e-26100.00hypothetical protein Csa_3G009430 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0L551|A0A0A0L551_CUCSA4.8e-26100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009430 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G001530.1CsaV3_3G001530.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G001530CSPI03G01470Wild cucumber (PI 183967)cpicucB144
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G001530Silver-seed gourdcarcucB0821
CsaV3_3G001530Silver-seed gourdcarcucB1005
CsaV3_3G001530Silver-seed gourdcarcucB1012
CsaV3_3G001530Silver-seed gourdcarcucB1006
CsaV3_3G001530Cucumber (Gy14) v2cgybcucB117
CsaV3_3G001530Cucumber (Gy14) v2cgybcucB119
CsaV3_3G001530Cucumber (Gy14) v1cgycucB488
CsaV3_3G001530Cucumber (Gy14) v1cgycucB499
CsaV3_3G001530Cucurbita maxima (Rimu)cmacucB0380
CsaV3_3G001530Cucurbita maxima (Rimu)cmacucB0617
CsaV3_3G001530Cucurbita maxima (Rimu)cmacucB0718
CsaV3_3G001530Cucurbita maxima (Rimu)cmacucB0967
CsaV3_3G001530Cucurbita moschata (Rifu)cmocucB0377
CsaV3_3G001530Cucurbita moschata (Rifu)cmocucB0601
CsaV3_3G001530Cucurbita moschata (Rifu)cmocucB0705
CsaV3_3G001530Cucurbita moschata (Rifu)cmocucB0955
CsaV3_3G001530Cucurbita moschata (Rifu)cmocucB0969
CsaV3_3G001530Cucurbita pepo (Zucchini)cpecucB0255
CsaV3_3G001530Cucurbita pepo (Zucchini)cpecucB0300
CsaV3_3G001530Cucurbita pepo (Zucchini)cpecucB0895
CsaV3_3G001530Cucurbita pepo (Zucchini)cpecucB1055
CsaV3_3G001530Cucurbita pepo (Zucchini)cpecucB1059
CsaV3_3G001530Wild cucumber (PI 183967)cpicucB147
CsaV3_3G001530Bottle gourd (USVL1VR-Ls)cuclsiB161
CsaV3_3G001530Bottle gourd (USVL1VR-Ls)cuclsiB250
CsaV3_3G001530Melon (DHL92) v3.5.1cucmeB222
CsaV3_3G001530Melon (DHL92) v3.5.1cucmeB246
CsaV3_3G001530Melon (DHL92) v3.6.1cucmedB215
CsaV3_3G001530Melon (DHL92) v3.6.1cucmedB231
CsaV3_3G001530Watermelon (Charleston Gray)cucwcgB184
CsaV3_3G001530Watermelon (Charleston Gray)cucwcgB194
CsaV3_3G001530Watermelon (97103) v1cucwmB193
CsaV3_3G001530Watermelon (97103) v1cucwmB209
CsaV3_3G001530Watermelon (97103) v2cucwmbB182
CsaV3_3G001530Watermelon (97103) v2cucwmbB255
CsaV3_3G001530Wax gourdcucwgoB234
CsaV3_3G001530Wax gourdcucwgoB310
CsaV3_3G001530Cucumber (Chinese Long) v3cuccucB109
CsaV3_3G001530Silver-seed gourdcarcucB0532