CSPI03G01470 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G01470
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr3 : 1054962 .. 1055204 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCGGTTATTCAGATCTGAGTACACAACCTGAGGTCGCTCAAAGTGTGAATTCGCCAAACTAAAGCAGAATGACTCGTTTGCGAGTGGTTGTCAACTAACACAAGGTGGTGTTCGCGCCGACGACAATCTGTCCGTTCGAGGATCCAGGTTGTAGCGTCGAGAGAATTGCACGCTGCTGCTTGGCTAGAACCGCCGGAGAATTCGACGTCGATCGTAAATGCACGCCGGAATCTCGTTGA

mRNA sequence

ATGTTCGGTTATTCAGATCTGAGTACACAACCTGAGGTGGTGTTCGCGCCGACGACAATCTGTCCGTTCGAGGATCCAGGTTGTAGCGTCGAGAGAATTGCACGCTGCTGCTTGGCTAGAACCGCCGGAGAATTCGACGTCGATCGTAAATGCACGCCGGAATCTCGTTGA

Coding sequence (CDS)

ATGTTCGGTTATTCAGATCTGAGTACACAACCTGAGGTGGTGTTCGCGCCGACGACAATCTGTCCGTTCGAGGATCCAGGTTGTAGCGTCGAGAGAATTGCACGCTGCTGCTTGGCTAGAACCGCCGGAGAATTCGACGTCGATCGTAAATGCACGCCGGAATCTCGTTGA
Homology
[Close]
BLAST of CSPI03G01470 vs. TrEMBL
Match: A0A0A0L551_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G009430 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 2.6e-26
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 1 

Query: 1  MFGYSDLSTQPEVVFAPTTICPFEDPGCSVERIARCCLARTAGEFDVDRKCTPESR 57
          MFGYSDLSTQPEVVFAPTTICPFEDPGCSVERIARCCLARTAGEFDVDRKCTPESR
Sbjct: 1  MFGYSDLSTQPEVVFAPTTICPFEDPGCSVERIARCCLARTAGEFDVDRKCTPESR 56

[Close]
BLAST of CSPI03G01470 vs. NCBI nr
Match: gi|700200604|gb|KGN55737.1| (hypothetical protein Csa_3G009430 [Cucumis sativus])

HSP 1 Score: 125.2 bits (313), Expect = 3.7e-26
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 1 

Query: 1  MFGYSDLSTQPEVVFAPTTICPFEDPGCSVERIARCCLARTAGEFDVDRKCTPESR 57
          MFGYSDLSTQPEVVFAPTTICPFEDPGCSVERIARCCLARTAGEFDVDRKCTPESR
Sbjct: 1  MFGYSDLSTQPEVVFAPTTICPFEDPGCSVERIARCCLARTAGEFDVDRKCTPESR 56

The following BLAST results are available for this feature:
BLAST of CSPI03G01470 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI03G01470 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L551_CUCSA2.6e-26100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G009430 PE=4 SV=1[more]
BLAST of CSPI03G01470 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI03G01470 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700200604|gb|KGN55737.1|3.7e-26100.00hypothetical protein Csa_3G009430 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G01470.1CSPI03G01470.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI03G01470Csa3G009430Cucumber (Chinese Long) v2cpicuB120
CSPI03G01470CsaV3_3G001530Cucumber (Chinese Long) v3cpicucB144
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G01470Wax gourdcpiwgoB229
CSPI03G01470Wax gourdcpiwgoB308
CSPI03G01470Wild cucumber (PI 183967)cpicpiB100
CSPI03G01470Cucumber (Gy14) v1cgycpiB474
CSPI03G01470Cucumber (Gy14) v1cgycpiB484
CSPI03G01470Cucurbita maxima (Rimu)cmacpiB332
CSPI03G01470Cucurbita maxima (Rimu)cmacpiB519
CSPI03G01470Cucurbita maxima (Rimu)cmacpiB608
CSPI03G01470Cucurbita maxima (Rimu)cmacpiB829
CSPI03G01470Cucurbita moschata (Rifu)cmocpiB323
CSPI03G01470Cucurbita moschata (Rifu)cmocpiB509
CSPI03G01470Cucurbita moschata (Rifu)cmocpiB597
CSPI03G01470Cucurbita moschata (Rifu)cmocpiB817
CSPI03G01470Cucurbita moschata (Rifu)cmocpiB831
CSPI03G01470Cucumber (Chinese Long) v2cpicuB122
CSPI03G01470Melon (DHL92) v3.5.1cpimeB218
CSPI03G01470Melon (DHL92) v3.5.1cpimeB240
CSPI03G01470Watermelon (Charleston Gray)cpiwcgB180
CSPI03G01470Watermelon (Charleston Gray)cpiwcgB190
CSPI03G01470Watermelon (97103) v1cpiwmB184
CSPI03G01470Watermelon (97103) v1cpiwmB200
CSPI03G01470Cucurbita pepo (Zucchini)cpecpiB215
CSPI03G01470Cucurbita pepo (Zucchini)cpecpiB245
CSPI03G01470Cucurbita pepo (Zucchini)cpecpiB720
CSPI03G01470Cucurbita pepo (Zucchini)cpecpiB860
CSPI03G01470Cucurbita pepo (Zucchini)cpecpiB865
CSPI03G01470Bottle gourd (USVL1VR-Ls)cpilsiB147
CSPI03G01470Bottle gourd (USVL1VR-Ls)cpilsiB227
CSPI03G01470Melon (DHL92) v3.6.1cpimedB213
CSPI03G01470Melon (DHL92) v3.6.1cpimedB225
CSPI03G01470Cucumber (Gy14) v2cgybcpiB110
CSPI03G01470Cucumber (Gy14) v2cgybcpiB113
CSPI03G01470Silver-seed gourdcarcpiB0534
CSPI03G01470Silver-seed gourdcarcpiB0818
CSPI03G01470Silver-seed gourdcarcpiB1000
CSPI03G01470Silver-seed gourdcarcpiB1001
CSPI03G01470Silver-seed gourdcarcpiB1007
CSPI03G01470Cucumber (Chinese Long) v3cpicucB146
CSPI03G01470Watermelon (97103) v2cpiwmbB184
CSPI03G01470Watermelon (97103) v2cpiwmbB261