CsaV3_3G001430 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CGGAAAATTTTATTCGATAGAAAACTTCCTCCGTTTTGGATTCTTGTTGTTCTTGTGGAAATTCTTTATTGATCCGATTTTTGGGTGAGTTAGAATATTCACGGGTGATTCGGTCGATCCACCGAACGAGGAGGAAGAACGACGACATTGGTGCACGTTTTGGATCATTTTGGTCTCGATCTCGATCTGATCAAAAAGCTGTTCAGAAAATTCTCAGTTGGTTTTGATCGATTTGTTTTTTGTTTTTTTTTGTTTTGGAGAATATTGATTGGAGTTTTTGTAGGTATTGGTGTTGTTGTTGTTTGTGGAGTGGATTGGGTGAATCCGAAGGGGGGAAAGTATTGAAAAATTTAAGGATTTGATTTTGGATTCTACTGAAGAAGAAGAGCTGGAGGTGATTTGGTAATGGAATGTGGGTTTTGCTTATTTGGGTTTTGGTAGAGATTTGTAATTGGAGATAGATTATTGTTGATTTAGGTTTTACAGTAATTTTGAAGCAATTAGAGCTCTGTTTATTAACATGAGCAACAAACAACCGATTAAGTTAGACGACGAACAAATTGCGGAGTTGAGAGAAATCTTCCGGTCGTTTGATCGGAACAACGACGGGAGTTTGACTCAACTTGAACTCGGATCGCTTTTACGATCACTTGGTTTGAAGCCGAGTCCGGATCAGCTTGAGAGTTTGATAATGAAGGCAGATACGAACAGCAATGGATTAGTTGAATTTTCAGAGTTCGTAGCTTTGGTTGAGCCGGAGCTGGTATCGGCTAAATGCCCTTACACGGAGGAGCAATTAAAGCAGTTGTTTAGAATGTTCGATAGAGATGGGAATGGGTTCATCACTGCGGCCGAGTTGGCTCACTCGATGGCCAAACTCGGCCATGCTCTCACCGCGGAGGAACTCACCGGAATGATCAGGGAAGCCGATACCGATGGCGATGGCAGAATCAATTTTCAAGAGTTCTCTCAGGCAATTACTTCTGCTGCATTTGATAATTCCTGGGCATGATGATTTTTCTGGTAACAATCTTTCTCTCTATCTCTTTCTCACATTATATTGGACAATTTCTGCAGTTTTTCTTTCAATTGAGAATGGTAGGAATTTTAGTTCACATATTGGTTTTGTTTACAATATTGAGATTGTAAAGTCTATGCATATGTTTGCTTTGTGTACTATATCTGTATACATTTGTTCATGTTAGCGAGTTATACATAAGTTAGATTATGCTAAACTAGATTTTTAAAGCCATATCTTTACTTATTAATCATGAACTCTTTACATATTAAATGTATACAACATAAACTTGATAATCAAAATAGAAAATGTAGGGAATATAAACTCAAAAGATTCAAACTTCAGGCTAAAAGTCACTCTCTATTGAAACCCCTTTCTCATCTTGGAAGTGTTCAAGGCTTTGAGTTTGACTTCTAATGAAGCTAATATTGTTGGAGTTGGAAACTTTGAGGTTGTATGTTGTTTAGTATGAAGTGAATAAAACATTGGAGGGATGGAGAGAGAAAGAGAGAATCTCTCAATAAATGTGTCAAATTCAACAGTGAACACAGTTAAAGTTAGTGAAGTTGAGTTATTTAACACCGACTTATGAAGTTGGTGGACCAAACACCTCTAATAATGTCTTGGGTTTAGTAGTATTTTCTTTTTGCTATTGTAAAAGGTTTTTGTTTTGTTGTTGTTTGATTTTTACAATTCTTCTTTAGTTTAGTGTTCATTGTTGTCTTTAGATCACTTTTGTGCACATATCTCTCTCTCTAGTGAATGAAATAAGATGATCATTAAGATTCTCTCGACCAAAGAGTTATGGACAATCTCGGGGAAGATCATCATAGGGTTTCCCATTCTCTCTTTTCCCCCATCACTCCATAGACAAAAGCATGCCCCTTTCAAGCACTACATTTACTCCAATTCGATTATACTATTTGAAACATCGCTATGCACTTATACAATCACAAATATTCATGTTTGTTTTGTTCTTTGTTAAATGATGTTACATGATCATATGTAGATTGAAGGGTTCACCTCTATGATTTGTTAAAGAAAGTATAGGTCTGTCTAGTTATCCCTCTTATCACTAACCTCTGTCGTCATTTACGGATGCATGCTTGACTACATAGATTACTTTTGAAATATATATTGAAACAAAGGTTTATTTGATTAACACAAGTTGAAAAATGTCAACATTGTTGTTATATAAACTTCTTCTGGCAACCATTTGAGCATGAGAAACTAAGGTGTGTGATTGTAAATCGTTTTGCAGTGACTGGAAACAAACAGCAAATGGGGTGTTACCTGGATGGCAAATTATGATATACCAACACAAAGATCTTGTCAAGAAACTGAAAATGGTATTTTTGGGGTTAAGTTTGAATGTCTATTTAGTCTTCAAATCTATACCTATTTTTCTCTGCTTGATAAAGACACGATCGAGTTTAAGTTGTTGGGTTTCAAATTTTGGTTGTTTGCTTATAAAGTTGGAAGTCCAAACCAAAGACTGCTGGGATTTTTGCGAAGTATTTTAATTCCAATTCCAGTTTTGGATATGGTGTGTAGTTTGATGCTTTCGTGTTTTAACTTTTGTCCATCGAGATCTTGTTTAATTTCATTTTTTAGTCAATGAAATAACTTGAATATGATCGCG ATGAGCAACAAACAACCGATTAAGTTAGACGACGAACAAATTGCGGAGTTGAGAGAAATCTTCCGGTCGTTTGATCGGAACAACGACGGGAGTTTGACTCAACTTGAACTCGGATCGCTTTTACGATCACTTGGTTTGAAGCCGAGTCCGGATCAGCTTGAGAGTTTGATAATGAAGGCAGATACGAACAGCAATGGATTAGTTGAATTTTCAGAGTTCGTAGCTTTGGTTGAGCCGGAGCTGGTATCGGCTAAATGCCCTTACACGGAGGAGCAATTAAAGCAGTTGTTTAGAATGTTCGATAGAGATGGGAATGGGTTCATCACTGCGGCCGAGTTGGCTCACTCGATGGCCAAACTCGGCCATGCTCTCACCGCGGAGGAACTCACCGGAATGATCAGGGAAGCCGATACCGATGGCGATGGCAGAATCAATTTTCAAGAGTTCTCTCAGGCAATTACTTCTGCTGCATTTGATAATTCCTGGGCATGA ATGAGCAACAAACAACCGATTAAGTTAGACGACGAACAAATTGCGGAGTTGAGAGAAATCTTCCGGTCGTTTGATCGGAACAACGACGGGAGTTTGACTCAACTTGAACTCGGATCGCTTTTACGATCACTTGGTTTGAAGCCGAGTCCGGATCAGCTTGAGAGTTTGATAATGAAGGCAGATACGAACAGCAATGGATTAGTTGAATTTTCAGAGTTCGTAGCTTTGGTTGAGCCGGAGCTGGTATCGGCTAAATGCCCTTACACGGAGGAGCAATTAAAGCAGTTGTTTAGAATGTTCGATAGAGATGGGAATGGGTTCATCACTGCGGCCGAGTTGGCTCACTCGATGGCCAAACTCGGCCATGCTCTCACCGCGGAGGAACTCACCGGAATGATCAGGGAAGCCGATACCGATGGCGATGGCAGAATCAATTTTCAAGAGTTCTCTCAGGCAATTACTTCTGCTGCATTTGATAATTCCTGGGCATGA MSNKQPIKLDDEQIAELREIFRSFDRNNDGSLTQLELGSLLRSLGLKPSPDQLESLIMKADTNSNGLVEFSEFVALVEPELVSAKCPYTEEQLKQLFRMFDRDGNGFITAAELAHSMAKLGHALTAEELTGMIREADTDGDGRINFQEFSQAITSAAFDNSWA
BLAST of CsaV3_3G001430 vs. NCBI nr
Match: XP_004148765.1 (PREDICTED: probable calcium-binding protein CML18 [Cucumis sativus] >KGN55728.1 hypothetical protein Csa_3G008850 [Cucumis sativus]) HSP 1 Score: 279.6 bits (714), Expect = 6.6e-72 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of CsaV3_3G001430 vs. NCBI nr
Match: XP_008448654.1 (PREDICTED: probable calcium-binding protein CML18 [Cucumis melo]) HSP 1 Score: 276.6 bits (706), Expect = 5.6e-71 Identity = 161/163 (98.77%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of CsaV3_3G001430 vs. NCBI nr
Match: XP_022924802.1 (probable calcium-binding protein CML18 [Cucurbita moschata] >XP_023540544.1 probable calcium-binding protein CML18 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 275.4 bits (703), Expect = 1.3e-70 Identity = 142/163 (87.12%), Postives = 145/163 (88.96%), Query Frame = 0
BLAST of CsaV3_3G001430 vs. NCBI nr
Match: XP_022923350.1 (probable calcium-binding protein CML18 [Cucurbita moschata] >XP_022965322.1 probable calcium-binding protein CML18 [Cucurbita maxima] >XP_022965323.1 probable calcium-binding protein CML18 [Cucurbita maxima] >XP_022965324.1 probable calcium-binding protein CML18 [Cucurbita maxima] >XP_023552506.1 probable calcium-binding protein CML18 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 275.0 bits (702), Expect = 1.6e-70 Identity = 160/163 (98.16%), Postives = 162/163 (99.39%), Query Frame = 0
BLAST of CsaV3_3G001430 vs. NCBI nr
Match: XP_022145375.1 (probable calcium-binding protein CML18 [Momordica charantia]) HSP 1 Score: 274.2 bits (700), Expect = 2.8e-70 Identity = 159/163 (97.55%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of CsaV3_3G001430 vs. TAIR10
Match: AT3G03000.1 (EF hand calcium-binding protein family) HSP 1 Score: 225.7 bits (574), Expect = 2.1e-59 Identity = 125/157 (79.62%), Postives = 138/157 (87.90%), Query Frame = 0
BLAST of CsaV3_3G001430 vs. TAIR10
Match: AT1G32250.1 (Calcium-binding EF-hand family protein) HSP 1 Score: 214.2 bits (544), Expect = 6.2e-56 Identity = 115/165 (69.70%), Postives = 126/165 (76.36%), Query Frame = 0
BLAST of CsaV3_3G001430 vs. TAIR10
Match: AT3G25600.1 (Calcium-binding EF-hand family protein) HSP 1 Score: 100.1 bits (248), Expect = 1.3e-21 Identity = 57/148 (38.51%), Postives = 79/148 (53.38%), Query Frame = 0
BLAST of CsaV3_3G001430 vs. TAIR10
Match: AT2G41100.1 (Calcium-binding EF hand family protein) HSP 1 Score: 91.3 bits (225), Expect = 6.1e-19 Identity = 49/127 (38.58%), Postives = 78/127 (61.42%), Query Frame = 0
BLAST of CsaV3_3G001430 vs. TAIR10
Match: AT3G51920.1 (calmodulin 9) HSP 1 Score: 81.3 bits (199), Expect = 6.3e-16 Identity = 43/148 (29.05%), Postives = 77/148 (52.03%), Query Frame = 0
BLAST of CsaV3_3G001430 vs. Swiss-Prot
Match: sp|Q9M8U1|CML18_ARATH (Probable calcium-binding protein CML18 OS=Arabidopsis thaliana OX=3702 GN=CML18 PE=1 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 3.7e-58 Identity = 125/157 (79.62%), Postives = 138/157 (87.90%), Query Frame = 0
BLAST of CsaV3_3G001430 vs. Swiss-Prot
Match: sp|Q9LQN4|CML17_ARATH (Probable calcium-binding protein CML17 OS=Arabidopsis thaliana OX=3702 GN=CML17 PE=2 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 1.1e-54 Identity = 115/165 (69.70%), Postives = 126/165 (76.36%), Query Frame = 0
BLAST of CsaV3_3G001430 vs. Swiss-Prot
Match: sp|Q9AWK2|CML11_ORYSJ (Probable calcium-binding protein CML11 OS=Oryza sativa subsp. japonica OX=39947 GN=CML11 PE=2 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 1.2e-53 Identity = 106/152 (69.74%), Postives = 123/152 (80.92%), Query Frame = 0
BLAST of CsaV3_3G001430 vs. Swiss-Prot
Match: sp|Q6L5F4|CML14_ORYSJ (Probable calcium-binding protein CML14 OS=Oryza sativa subsp. japonica OX=39947 GN=CML14 PE=2 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 2.1e-29 Identity = 66/120 (55.00%), Postives = 84/120 (70.00%), Query Frame = 0
BLAST of CsaV3_3G001430 vs. Swiss-Prot
Match: sp|P04464|CALM_WHEAT (Calmodulin OS=Triticum aestivum OX=4565 PE=1 SV=3) HSP 1 Score: 109.4 bits (272), Expect = 3.9e-23 Identity = 67/142 (47.18%), Postives = 96/142 (67.61%), Query Frame = 0
BLAST of CsaV3_3G001430 vs. TrEMBL
Match: tr|A0A0A0L1S8|A0A0A0L1S8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G008850 PE=4 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 4.4e-72 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of CsaV3_3G001430 vs. TrEMBL
Match: tr|A0A1S3BKU3|A0A1S3BKU3_CUCME (probable calcium-binding protein CML18 OS=Cucumis melo OX=3656 GN=LOC103490757 PE=4 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 3.7e-71 Identity = 161/163 (98.77%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of CsaV3_3G001430 vs. TrEMBL
Match: tr|V4T3K5|V4T3K5_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002732mg PE=4 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 3.0e-65 Identity = 131/163 (80.37%), Postives = 141/163 (86.50%), Query Frame = 0
BLAST of CsaV3_3G001430 vs. TrEMBL
Match: tr|A0A2R6QPE0|A0A2R6QPE0_ACTCH (Calcium-binding protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc16065 PE=4 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 8.9e-65 Identity = 129/161 (80.12%), Postives = 139/161 (86.34%), Query Frame = 0
BLAST of CsaV3_3G001430 vs. TrEMBL
Match: tr|A0A2P5EIL6|A0A2P5EIL6_9ROSA (Parvalbumin OS=Trema orientalis OX=63057 GN=TorRG33x02_188000 PE=4 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 1.5e-64 Identity = 128/163 (78.53%), Postives = 138/163 (84.66%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |