CsaV3_2G036000 (gene) Cucumber (Chinese Long) v3

NameCsaV3_2G036000
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2 : 24195915 .. 24196163 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTTTTTTCTCCTCCTTCTGTTGTTGAACCATCTCAAGTTGAAGCTTCAAATGAAAATATTACTTCACAAACTGAGAGCAATCCTCTCTCCTTCTACTGATGTTGGAGACAATATTGCACATCATCCTATGAGTTCTCATTTAGGTTCTTCTCAGAATGATGTTGTAGTTTTGCCACTTGCCATTATATTCCCCATGCTGGTCTTTGATGATCTACACGACAATGTCAAACTCTTGGATTTTTAA

mRNA sequence

ATGAAGTTTTTTCTCCTCCTTCTGTTGTTGAACCATCTCAAGTTGAAGCTTCAAATGAAAATATTACTTCACAAACTGAGAGCAATCCTCTCTCCTTCTACTGATGTTGGAGACAATATTGCACATCATCCTATGAGTTCTCATTTAGGTTCTTCTCAGAATGATGTTGTAGTTTTGCCACTTGCCATTATATTCCCCATGCTGGTCTTTGATGATCTACACGACAATGTCAAACTCTTGGATTTTTAA

Coding sequence (CDS)

ATGAAGTTTTTTCTCCTCCTTCTGTTGTTGAACCATCTCAAGTTGAAGCTTCAAATGAAAATATTACTTCACAAACTGAGAGCAATCCTCTCTCCTTCTACTGATGTTGGAGACAATATTGCACATCATCCTATGAGTTCTCATTTAGGTTCTTCTCAGAATGATGTTGTAGTTTTGCCACTTGCCATTATATTCCCCATGCTGGTCTTTGATGATCTACACGACAATGTCAAACTCTTGGATTTTTAA

Protein sequence

MKFFLLLLLLNHLKLKLQMKILLHKLRAILSPSTDVGDNIAHHPMSSHLGSSQNDVVVLPLAIIFPMLVFDDLHDNVKLLDF
BLAST of CsaV3_2G036000 vs. NCBI nr
Match: KGN63360.1 (hypothetical protein Csa_2G432280 [Cucumis sativus])

HSP 1 Score: 154.8 bits (390), Expect = 1.2e-34
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0

Query: 1  MKFFLLLLLLNHLKLKLQMKILLHKLRAILSPSTDVGDNIAHHPMSSHLGSSQNDVVVLP 60
          MKFFLLLLLLNHLKLKLQMKILLHKLRAILSPSTDVGDNIAHHPMSSHLGSSQNDVVVLP
Sbjct: 1  MKFFLLLLLLNHLKLKLQMKILLHKLRAILSPSTDVGDNIAHHPMSSHLGSSQNDVVVLP 60

Query: 61 LAIIFPMLVFDDLHDNVKLLDF 83
          LAIIFPMLVFDDLHDNVKLLDF
Sbjct: 61 LAIIFPMLVFDDLHDNVKLLDF 82

BLAST of CsaV3_2G036000 vs. TrEMBL
Match: tr|A0A0A0LN78|A0A0A0LN78_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G432280 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 8.2e-35
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0

Query: 1  MKFFLLLLLLNHLKLKLQMKILLHKLRAILSPSTDVGDNIAHHPMSSHLGSSQNDVVVLP 60
          MKFFLLLLLLNHLKLKLQMKILLHKLRAILSPSTDVGDNIAHHPMSSHLGSSQNDVVVLP
Sbjct: 1  MKFFLLLLLLNHLKLKLQMKILLHKLRAILSPSTDVGDNIAHHPMSSHLGSSQNDVVVLP 60

Query: 61 LAIIFPMLVFDDLHDNVKLLDF 83
          LAIIFPMLVFDDLHDNVKLLDF
Sbjct: 61 LAIIFPMLVFDDLHDNVKLLDF 82

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN63360.11.2e-34100.00hypothetical protein Csa_2G432280 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LN78|A0A0A0LN78_CUCSA8.2e-35100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G432280 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G036000.1CsaV3_2G036000.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None