CsaV3_2G035290 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_2G035290
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Transmembrane protein, putative (DUF1218)
Location	chr2 : 23606446 .. 23607697 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGTGGGAGGTTAAAAAGTCAAAAAAGTTTAGCCAAGAATTAAGGAAATTATGGGCACGCCCTAATTAACTGGGCCATGCAGTCTCCCAACATAAACATGAGCTGTTTTTATGCCCTACTTTACTTGTTCCCAAACGAAAAGAATCCAACATAAAAAGAACCCCCCAAAGCTAAAAGCTTTTGTAGTGTATGTGTAAAGAAGCCTTTTTAAACTTGAAAGAAAAAAAAAACCACTACTCTTGTTCTTAAAAGGCCATAAATAGTTTCATTTCCCTTACCTCTTCCACTGCCTTTCCTTTTGATATCCCTCTCATCAATAGTACCATGAAGTTGGTGGGTGTGTTGATTTGCTTGTTGGTGGTGGCGATGGATATTGTTGCCGGGCTGCTTGGGATCGAAGCCGATATAGCTCAAAACAAGGTAGAGATTAAATTTAAATTGAACTTTGCTCAAAAGAAAACCAATCTTTTGTTTGTATGAATGAATAATAATAATAATAGAATGTGTTTTATAGGTGAAGCATCTTCGATTATGGATATTTGAATGTAGAGATCCAAGTGAGCAAGCTTTTAAATTGGGATTAGGAGCAGCAGGGCTTTTGGGATTGGCTCATATTATTGCTAATTTGCTTGGTGGTTGTAATTGCATTTGCTCTCAAGATGAGCTTGAAAAATCTCCTCCAAATAGACAAATCTCCATTGCTTGCCTCATTTTCACTTGGTATTTTACTTACTCTCTCAAATTTCAAATCTACAAATCTAAATTTGAATTTTCAATACCTGGTTTAGTAATCATTACGTTTTTTTTTTTTCTTTGAAAGGATAATTCTTGCCGTGGGAATGTCTATGTTGGTGATTGGAGCAATGGGGAACAACAAATCAAGAGCAAGTTGTGGATTCACACACCATCATTTTCTGTCAATTGGTGGGATTTTGTGTTTTGTTCATGGCTTGTTTTGTGTTGCTTATTATGTTACTGCAACTGCTGCTGAGTAATGGGAAAATGAGAAAAAAGGTTCGAATGGGAAATTTCTTTTGTTTTGTTTTCTTTTCTTTTAATCTAATTAAAGTTGAATGATGTAATATATATATATACTTTGACCCCATTTTTCCTTTTTATTTATTTATTTTTTTCTTTTGATGTTGCAAATCAGACAAAACCTTTTCTAATCATTCTTCTTTTCTTCACTGTTAAGTATTCTCCACAATTCTCTGAACTACACAGTTAATAATATTGGATTCTTTTCATGGC

mRNA sequence

ATGAAGTTGGTGGGTGTGTTGATTTGCTTGTTGGTGGTGGCGATGGATATTGTTGCCGGGCTGCTTGGGATCGAAGCCGATATAGCTCAAAACAAGGTGAAGCATCTTCGATTATGGATATTTGAATGTAGAGATCCAAGTGAGCAAGCTTTTAAATTGGGATTAGGAGCAGCAGGGCTTTTGGGATTGGCTCATATTATTGCTAATTTGCTTGGTGGTTGTAATTGCATTTGCTCTCAAGATGAGCTTGAAAAATCTCCTCCAAATAGACAAATCTCCATTGCTTGCCTCATTTTCACTTGGATAATTCTTGCCGTGGGAATGTCTATGTTGGTGATTGGAGCAATGGGGAACAACAAATCAAGAGCAAGTTGTGGATTCACACACCATCATTTTCTGTCAATTGGTGGGATTTTGTGTTTTGTTCATGGCTTGTTTTGTGTTGCTTATTATGTTACTGCAACTGCTGCTGAGTAA

Coding sequence (CDS)

ATGAAGTTGGTGGGTGTGTTGATTTGCTTGTTGGTGGTGGCGATGGATATTGTTGCCGGGCTGCTTGGGATCGAAGCCGATATAGCTCAAAACAAGGTGAAGCATCTTCGATTATGGATATTTGAATGTAGAGATCCAAGTGAGCAAGCTTTTAAATTGGGATTAGGAGCAGCAGGGCTTTTGGGATTGGCTCATATTATTGCTAATTTGCTTGGTGGTTGTAATTGCATTTGCTCTCAAGATGAGCTTGAAAAATCTCCTCCAAATAGACAAATCTCCATTGCTTGCCTCATTTTCACTTGGATAATTCTTGCCGTGGGAATGTCTATGTTGGTGATTGGAGCAATGGGGAACAACAAATCAAGAGCAAGTTGTGGATTCACACACCATCATTTTCTGTCAATTGGTGGGATTTTGTGTTTTGTTCATGGCTTGTTTTGTGTTGCTTATTATGTTACTGCAACTGCTGCTGAGTAA

Protein sequence

MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACLIFTWIILAVGMSMLVIGAMGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE

Homology

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BLAST of CsaV3_2G035290 vs. NCBI nr
Match: XP_004151872.1 (PREDICTED: uncharacterized protein LOC101212188 [Cucumis sativus] >KGN63282.1 hypothetical protein Csa_2G423620 [Cucumis sativus])

HSP 1 Score: 316.6 bits (810), Expect = 4.7e-83
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL
Sbjct: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60

Query: 61  LGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACLIFTWIILAVGMSMLVIGAMGNNK 120
           LGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACLIFTWIILAVGMSMLVIGAMGNNK
Sbjct: 61  LGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACLIFTWIILAVGMSMLVIGAMGNNK 120

Query: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE 159
           SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE
Sbjct: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE 158

[Close]

BLAST of CsaV3_2G035290 vs. NCBI nr
Match: XP_008455827.1 (PREDICTED: uncharacterized protein LOC103495927 [Cucumis melo])

HSP 1 Score: 316.2 bits (809), Expect = 6.2e-83
Identity = 157/158 (99.37%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL
Sbjct: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60

Query: 61  LGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACLIFTWIILAVGMSMLVIGAMGNNK 120
           LGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACL+FTWIILAVGMSMLVIGAMGNNK
Sbjct: 61  LGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACLVFTWIILAVGMSMLVIGAMGNNK 120

Query: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE 159
           SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE
Sbjct: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE 158

[Close]

BLAST of CsaV3_2G035290 vs. NCBI nr
Match: XP_022944616.1 (uncharacterized protein LOC111449022 [Cucurbita moschata])

HSP 1 Score: 296.2 bits (757), Expect = 6.6e-77
Identity = 144/158 (91.14%), Postives = 154/158 (97.47%), Query Frame = 0


Query: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVL+CLLVVAMDIVAGLLGIEADIAQNKVK+LRLWIFECRDPS QA++LGL AAG+
Sbjct: 1   MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGV 60

Query: 61  LGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACLIFTWIILAVGMSMLVIGAMGNNK 120
           LGLAH+IANLLGGCNCICSQ+ LEKSPPN+QISIACL+FTWIILAV MSMLVIGA+GNNK
Sbjct: 61  LGLAHVIANLLGGCNCICSQEALEKSPPNKQISIACLVFTWIILAVAMSMLVIGALGNNK 120

Query: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE 159
           SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE
Sbjct: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE 158

[Close]

BLAST of CsaV3_2G035290 vs. NCBI nr
Match: XP_023512382.1 (uncharacterized protein LOC111777151 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 295.8 bits (756), Expect = 8.7e-77
Identity = 143/158 (90.51%), Postives = 154/158 (97.47%), Query Frame = 0


Query: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVL+CLLVVAMDIVAGLLGIEADIAQNKVK+LRLWIFECRDPS QA++LGL AAG+
Sbjct: 1   MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGV 60

Query: 61  LGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACLIFTWIILAVGMSMLVIGAMGNNK 120
           LGLAH+IANLLGGCNCICSQ+ LEKSPPN+QIS+ACL+FTWIILAV MSMLVIGA+GNNK
Sbjct: 61  LGLAHVIANLLGGCNCICSQEALEKSPPNKQISVACLVFTWIILAVAMSMLVIGALGNNK 120

Query: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE 159
           SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE
Sbjct: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE 158

[Close]

BLAST of CsaV3_2G035290 vs. NCBI nr
Match: XP_022140603.1 (uncharacterized protein LOC111011214 isoform X2 [Momordica charantia])

HSP 1 Score: 293.1 bits (749), Expect = 5.6e-76
Identity = 143/158 (90.51%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MK+VGVLICLLVVAMDIVAGLLGIEA+IAQNKVK LRLWIFECR+PSEQAFKLGLGAAGL
Sbjct: 1   MKVVGVLICLLVVAMDIVAGLLGIEAEIAQNKVKQLRLWIFECREPSEQAFKLGLGAAGL 60

Query: 61  LGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACLIFTWIILAVGMSMLVIGAMGNNK 120
           LGLAHIIANLLGGCNCICSQ+E++KSPPNRQ+S+ACLIFTWIILAVGMSMLVIG + NNK
Sbjct: 61  LGLAHIIANLLGGCNCICSQEEIQKSPPNRQLSLACLIFTWIILAVGMSMLVIGTLSNNK 120

Query: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE 159
           SRASCGFTHHHFLSIGGILCFVH LFCVAYYV+ATA E
Sbjct: 121 SRASCGFTHHHFLSIGGILCFVHALFCVAYYVSATADE 158

[Close]

BLAST of CsaV3_2G035290 vs. TAIR10
Match: AT2G32280.1 (Protein of unknown function (DUF1218))

HSP 1 Score: 236.5 bits (602), Expect = 1.1e-62
Identity = 103/157 (65.61%), Postives = 136/157 (86.62%), Query Frame = 0


Query: 2   KLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLL 61
           K+ G+L+CL++V +D+ A +LGI+A++AQN+VKH+RLW+FECR+PS+ AF+LGLGAA +L
Sbjct: 3   KIGGILVCLVIVGLDVAAAILGIQAEVAQNQVKHMRLWLFECREPSQDAFRLGLGAAAIL 62

Query: 62  GLAHIIANLLGGCNCICSQDELEKSPPNRQISIACLIFTWIILAVGMSMLVIGAMGNNKS 121
            +AH++ NL+GGC CICSQDE ++S   RQIS+ACL+ TWI+ AVG   +VIG M N+KS
Sbjct: 63  VMAHVLLNLVGGCLCICSQDEFQRSSSTRQISMACLVLTWIVFAVGFGSIVIGTMSNSKS 122

Query: 122 RASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE 159
           R+SCGFTHHHFLSIGGILCF+H LFCVAYYV+ATAA+
Sbjct: 123 RSSCGFTHHHFLSIGGILCFLHALFCVAYYVSATAAK 159

[Close]

BLAST of CsaV3_2G035290 vs. TAIR10
Match: AT4G21310.1 (Protein of unknown function (DUF1218))

HSP 1 Score: 217.2 bits (552), Expect = 7.1e-57
Identity = 101/154 (65.58%), Postives = 127/154 (82.47%), Query Frame = 0


Query: 4   VGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGL 63
           VG  IC+L++AMD+ AG+LGIEA+IAQNKVKHL++WIFECRDPS  AFK GL A  LL L
Sbjct: 5   VGFFICILILAMDVSAGILGIEAEIAQNKVKHLKMWIFECRDPSYTAFKYGLAACILLVL 64

Query: 64  AHIIANLLGGCNCICSQDELEKSPPNRQISIACLIFTWIILAVGMSMLVIGAMGNNKSRA 123
           AH+ AN LGGC C+ S+ +LEKS  N+Q+++A LIFTWIILA+  SML++G M N++SR 
Sbjct: 65  AHVTANFLGGCLCVASRQDLEKSSANKQLAVASLIFTWIILAIAFSMLIVGTMANSRSRK 124

Query: 124 SCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAA 158
           +CG +HH  LSIGGILCFVHGLF VAYY++ATA+
Sbjct: 125 NCGISHHRVLSIGGILCFVHGLFAVAYYISATAS 158

[Close]

BLAST of CsaV3_2G035290 vs. TAIR10
Match: AT1G11500.1 (Protein of unknown function (DUF1218))

HSP 1 Score: 117.5 bits (293), Expect = 7.7e-27
Identity = 62/162 (38.27%), Postives = 96/162 (59.26%), Query Frame = 0


Query: 4   VGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFE------C-RDPSEQAFKLGLG 63
           +G L+ ++++  DI A +LGIEA+IAQ+K  H             C R PS+ AF  G+ 
Sbjct: 5   LGFLVSVVIICADITATVLGIEAEIAQSKAPHXXXXXXSRHSGSGCRRSPSDGAFAEGVA 64

Query: 64  AAGLLGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACLIFTWIILAVGMSMLVIGAM 123
           A  LL + H++AN+LGGC  I S+ + +++  N+ +++A L+ +WI   V  S L+IG +
Sbjct: 65  AMVLLFIVHVLANVLGGCTYIRSKQDFKRATANKILAVAFLVLSWIFFVVSYSTLMIGTL 124

Query: 124 GNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE 159
            N+++   C   H  F  IGGI C  HG+   AYYV+A AA+
Sbjct: 125 ANSRTNRLCSLPHRWFFLIGGIFCLGHGVVTSAYYVSAIAAK 166

[Close]

BLAST of CsaV3_2G035290 vs. TAIR10
Match: AT1G05291.1 (Protein of unknown function (DUF1218))

HSP 1 Score: 103.2 bits (256), Expect = 1.5e-22
Identity = 58/155 (37.42%), Postives = 89/155 (57.42%), Query Frame = 0


Query: 6   VLICL-LVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLA 65
           +++C+ L V +DIVAG +G++A  AQ  VKH +L   EC+ PS+ AF LG+ A   L  A
Sbjct: 17  IIVCIVLTVGLDIVAGFVGLQAQAAQQYVKHDKL---ECKAPSKTAFVLGIIAVSCLATA 76

Query: 66  HIIANLLGG--CNCICSQDELEKSPPNRQISIACLIFTWIILAVGMSMLVIGAMGNNKSR 125
           H+ AN++G    N   +   L K+      ++ACL   W++   G  +L  G   N +SR
Sbjct: 77  HVSANVIGCSISNLFQALGALPKNKITTYFNMACLFLIWVVGIFGALILANGIWSNTESR 136

Query: 126 ASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAA 158
             C FT++H  SIGG +CF+H +    YY+++  A
Sbjct: 137 IRCRFTNNHVFSIGGKVCFLHAIVSGIYYISSIVA 168

[Close]

BLAST of CsaV3_2G035290 vs. TrEMBL
Match: tr|A0A0A0LR43|A0A0A0LR43_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G423620 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 3.1e-83
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL
Sbjct: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60

Query: 61  LGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACLIFTWIILAVGMSMLVIGAMGNNK 120
           LGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACLIFTWIILAVGMSMLVIGAMGNNK
Sbjct: 61  LGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACLIFTWIILAVGMSMLVIGAMGNNK 120

Query: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE 159
           SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE
Sbjct: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE 158

[Close]

BLAST of CsaV3_2G035290 vs. TrEMBL
Match: tr|A0A1S3C1S7|A0A1S3C1S7_CUCME (uncharacterized protein LOC103495927 OS=Cucumis melo OX=3656 GN=LOC103495927 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 4.1e-83
Identity = 157/158 (99.37%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL
Sbjct: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60

Query: 61  LGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACLIFTWIILAVGMSMLVIGAMGNNK 120
           LGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACL+FTWIILAVGMSMLVIGAMGNNK
Sbjct: 61  LGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACLVFTWIILAVGMSMLVIGAMGNNK 120

Query: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE 159
           SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE
Sbjct: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE 158

[Close]

BLAST of CsaV3_2G035290 vs. TrEMBL
Match: tr|A9P921|A9P921_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G040900v3 PE=2 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 3.6e-71
Identity = 129/157 (82.17%), Postives = 148/157 (94.27%), Query Frame = 0


Query: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           +K+ GVL+CLL+VAMD+VAG+LGI+ADIAQNKVKHLRLWIFECRDPS+ AFKLGL AAG+
Sbjct: 2   VKIGGVLVCLLIVAMDVVAGILGIQADIAQNKVKHLRLWIFECRDPSQDAFKLGLAAAGV 61

Query: 61  LGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACLIFTWIILAVGMSMLVIGAMGNNK 120
           LGLAH+IANLLGGC CICSQ+EL+++ PNRQ+S+AC +FTWIILAVG+SMLVIG M NNK
Sbjct: 62  LGLAHVIANLLGGCMCICSQEELQRASPNRQLSVACFLFTWIILAVGLSMLVIGTMSNNK 121

Query: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAA 158
           SRASCGFTHHHF SIGGILCFVHGLFCVAYYV+ATAA
Sbjct: 122 SRASCGFTHHHFFSIGGILCFVHGLFCVAYYVSATAA 158

[Close]

BLAST of CsaV3_2G035290 vs. TrEMBL
Match: tr|A0A2P5BT39|A0A2P5BT39_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_309940 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.7e-68
Identity = 125/158 (79.11%), Postives = 147/158 (93.04%), Query Frame = 0


Query: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           +KLVG+L+C L+V +D+VAG+LGI+A+  QNKVKHLRLWIFECRDPS++AFKLGL AA L
Sbjct: 2   VKLVGILVCFLIVVIDVVAGILGIQAETEQNKVKHLRLWIFECRDPSQEAFKLGLAAASL 61

Query: 61  LGLAHIIANLLGGC-NCICSQDELEKSPPNRQISIACLIFTWIILAVGMSMLVIGAMGNN 120
           L LAH++ANLLGGC NCICSQDEL+K+PPNRQ+S+ACLIFTWIILAVG+SMLVIG + NN
Sbjct: 62  LALAHVLANLLGGCQNCICSQDELQKAPPNRQLSVACLIFTWIILAVGLSMLVIGTLSNN 121

Query: 121 KSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAA 158
           KSRASCGFTHHHFLSIGGILCFVHGLF VAYY++ATA+
Sbjct: 122 KSRASCGFTHHHFLSIGGILCFVHGLFSVAYYISATAS 159

[Close]

BLAST of CsaV3_2G035290 vs. TrEMBL
Match: tr|V4UEK6|V4UEK6_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10016802mg PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 4.9e-68
Identity = 123/157 (78.34%), Postives = 144/157 (91.72%), Query Frame = 0


Query: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           +K+ GVL+CLL++A+D+ AG+LG +A++AQNKVKHLRLWIFECRDPS  AFKLGL AAGL
Sbjct: 2   VKVGGVLVCLLIIALDVAAGILGFQAEVAQNKVKHLRLWIFECRDPSHDAFKLGLAAAGL 61

Query: 61  LGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACLIFTWIILAVGMSMLVIGAMGNNK 120
           L LAH+IANLLGGC CICSQDEL K+ PNRQ+S+ACL+F+WIILAVGMSMLVIG + NNK
Sbjct: 62  LALAHVIANLLGGCMCICSQDELSKASPNRQLSLACLVFSWIILAVGMSMLVIGTLSNNK 121

Query: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAA 158
           SRASCG THHHFLSIGGILCFVHGLFCVAYYV+++AA
Sbjct: 122 SRASCGLTHHHFLSIGGILCFVHGLFCVAYYVSSSAA 158

The following BLAST results are available for this feature:

BLAST of CsaV3_2G035290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151872.1	4.7e-83	100.00	PREDICTED: uncharacterized protein LOC101212188 [Cucumis sativus] >KGN63282.1 hy...	[more]
XP_008455827.1	6.2e-83	99.37	PREDICTED: uncharacterized protein LOC103495927 [Cucumis melo]	[more]
XP_022944616.1	6.6e-77	91.14	uncharacterized protein LOC111449022 [Cucurbita moschata]	[more]
XP_023512382.1	8.7e-77	90.51	uncharacterized protein LOC111777151 [Cucurbita pepo subsp. pepo]	[more]
XP_022140603.1	5.6e-76	90.51	uncharacterized protein LOC111011214 isoform X2 [Momordica charantia]	[more]

BLAST of CsaV3_2G035290 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G32280.1	1.1e-62	65.61	Protein of unknown function (DUF1218)	[more]
AT4G21310.1	7.1e-57	65.58	Protein of unknown function (DUF1218)	[more]
AT1G11500.1	7.7e-27	38.27	Protein of unknown function (DUF1218)	[more]
AT1G05291.1	1.5e-22	37.42	Protein of unknown function (DUF1218)	[more]

BLAST of CsaV3_2G035290 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_2G035290 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LR43\|A0A0A0LR43_CUCSA	3.1e-83	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G423620 PE=4 SV=1	[more]
tr\|A0A1S3C1S7\|A0A1S3C1S7_CUCME	4.1e-83	99.37	uncharacterized protein LOC103495927 OS=Cucumis melo OX=3656 GN=LOC103495927 PE=...	[more]
tr\|A9P921\|A9P921_POPTR	3.6e-71	82.17	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G040900v3 PE=...	[more]
tr\|A0A2P5BT39\|A0A2P5BT39_9ROSA	1.7e-68	79.11	Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_309940 PE=4 S...	[more]
tr\|V4UEK6\|V4UEK6_9ROSI	4.9e-68	78.34	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10016802mg PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009606	DUF1218

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0010588	cotyledon vascular tissue pattern formation
biological_process	GO:0010305	leaf vascular tissue pattern formation
biological_process	GO:0010087	phloem or xylem histogenesis
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G035290.1	CsaV3_2G035290.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Protein of unknown function DUF1218	PFAM	PF06749	DUF1218	coord: 57..144 e-value: 2.9E-21 score: 75.7
None	No IPR available	PANTHER	PTHR31769:SF4	SUBFAMILY NOT NAMED	coord: 2..157
None	No IPR available	PANTHER	PTHR31769	FAMILY NOT NAMED	coord: 2..157

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_2G035290	CSPI06G33950	Wild cucumber (PI 183967)	cpicucB323
CsaV3_2G035290	CSPI02G26770	Wild cucumber (PI 183967)	cpicucB081
CsaV3_2G035290	Cucsa.072960	Cucumber (Gy14) v1	cgycucB069
CsaV3_2G035290	Cucsa.045620	Cucumber (Gy14) v1	cgycucB022
CsaV3_2G035290	CmaCh02G001440	Cucurbita maxima (Rimu)	cmacucB0702
CsaV3_2G035290	CmaCh20G006420	Cucurbita maxima (Rimu)	cmacucB0650
CsaV3_2G035290	CmoCh07G002830	Cucurbita moschata (Rifu)	cmocucB0995
CsaV3_2G035290	CmoCh20G006050	Cucurbita moschata (Rifu)	cmocucB0640
CsaV3_2G035290	CmoCh02G001490	Cucurbita moschata (Rifu)	cmocucB0688
CsaV3_2G035290	Cp4.1LG16g04620	Cucurbita pepo (Zucchini)	cpecucB0336
CsaV3_2G035290	Cp4.1LG19g07590	Cucurbita pepo (Zucchini)	cpecucB0589
CsaV3_2G035290	Cp4.1LG05g14610	Cucurbita pepo (Zucchini)	cpecucB0880
CsaV3_2G035290	CsGy2G026240	Cucumber (Gy14) v2	cgybcucB065
CsaV3_2G035290	Carg13547	Silver-seed gourd	carcucB0026
CsaV3_2G035290	Carg03150	Silver-seed gourd	carcucB0365
CsaV3_2G035290	Cla001327	Watermelon (97103) v1	cucwmB145
CsaV3_2G035290	Cla010513	Watermelon (97103) v1	cucwmB155
CsaV3_2G035290	Cla019424	Watermelon (97103) v1	cucwmB129
CsaV3_2G035290	MELO3C019224	Melon (DHL92) v3.5.1	cucmeB103
CsaV3_2G035290	ClCG03G005140	Watermelon (Charleston Gray)	cucwcgB147
CsaV3_2G035290	ClCG01G022300	Watermelon (Charleston Gray)	cucwcgB125
CsaV3_2G035290	ClCG02G008330	Watermelon (Charleston Gray)	cucwcgB138
CsaV3_2G035290	Lsi10G001620	Bottle gourd (USVL1VR-Ls)	cuclsiB105
CsaV3_2G035290	MELO3C007350.2	Melon (DHL92) v3.6.1	cucmedB151
CsaV3_2G035290	MELO3C019224.2	Melon (DHL92) v3.6.1	cucmedB096
CsaV3_2G035290	Cla97C02G034960	Watermelon (97103) v2	cucwmbB125
CsaV3_2G035290	Bhi10G001159	Wax gourd	cucwgoB180

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsaV3_2G035290	CsaV3_6G049430	Cucumber (Chinese Long) v3	cuccucB086

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_2G035290	Cucumber (Chinese Long) v3	cuccucB099
CsaV3_2G035290	Silver-seed gourd	carcucB0913
CsaV3_2G035290	Cucumber (Gy14) v2	cgybcucB316
CsaV3_2G035290	Cucumber (Gy14) v1	cgycucB223
CsaV3_2G035290	Cucurbita maxima (Rimu)	cmacucB0606
CsaV3_2G035290	Cucurbita maxima (Rimu)	cmacucB0703
CsaV3_2G035290	Cucurbita moschata (Rifu)	cmocucB0592
CsaV3_2G035290	Cucurbita pepo (Zucchini)	cpecucB0290
CsaV3_2G035290	Cucurbita pepo (Zucchini)	cpecucB0881
CsaV3_2G035290	Wild cucumber (PI 183967)	cpicucB385
CsaV3_2G035290	Bottle gourd (USVL1VR-Ls)	cuclsiB110
CsaV3_2G035290	Melon (DHL92) v3.5.1	cucmeB107
CsaV3_2G035290	Melon (DHL92) v3.6.1	cucmedB100
CsaV3_2G035290	Watermelon (Charleston Gray)	cucwcgB141
CsaV3_2G035290	Watermelon (97103) v1	cucwmB157
CsaV3_2G035290	Watermelon (97103) v2	cucwmbB127
CsaV3_2G035290	Wax gourd	cucwgoB158