CsaV3_2G033630 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAGGAAATAATATAATTAATTAGGTATTAAGAAGAGTGGTAAATGAGTGTAGAGTGAAACTAGGGCACTTCATCTTCTTCGCTTGACGACGAAGACCACCAACCAACCAACCAACCACTTGAAGAAAGCTCCCATTGCGAGATTTGTGCTTCCATCTTCTCTTCTTCGTTCTTCTCTTTTTCCAATCAAGAATTAGATTCCACTATCTCAACCTTCCATTTCCTTTTTTTTTTTTCTTCTTTTTTTTGTTCTCTCTAATCTTTGAGCTCAATCATGCCCCCATGCTGTACTTGAGAGCTATCGTGAGTTTCTTTCTCGCTTTCTAGATCTATTTAAATCATGCTTTGGATTTTGTTATTTGTACCGTGTTTTCTCTACTTTCATACTGCTGTTCTTTGTTAGTTTCTTACATTTCAATTGCTTGGGGGTTTTTGCTTCTTACCCTGTTTTAGGATAATGGGTTTTGTTTCCTCCACCCTTTATTTGGCCCCCCTTGGAAAGCTGTGAAGATTCAATGATGAATGTGATGATATTTGCTATGATAATACGGCCAAGTTGCTACATTAATGTTAACCCATTTCATTATTGCCTTGTCCTTTTCCCAATCCTCCGATGTCTACCGTTTCTATTGTCCATATTTTGGCTAGACCTGTCTAAATGAGATTTCCTTTCCTTCTGGATAAAGACCTTGCCCTTGCTGTAATTTAAAGAATCAAATCCAGTATTTTAGAGGGAGCTATTCGGTAAGATTGAAGGAACTGAGAAGACCCAGAATCCTTGATGTGTATTAACAGTGAATGAATAAACAATTTATTAAGTCAATGACAGGACTTGATGTTTGGCTATCGTTCTGTAATCTATCAAAGCATGGATTCGTGGGGTAAAAGAATTCCAAAGAAGAGGATGTATTGTCTTAAGAACTGAGAATTCCAAAATAACTTTCGAAAGAGTTGCAGGGAATTTGCAATGTCTCATATTATTAAGCCACTGAAAGGAGTTGATGGAGAAAATAACTGAGGTTTCAAGCCTCTAGTATGTAATGCTGCAATTTGAATGGCAGTCATTGAGCCCGTGCAACAGCTTAACTGAATACAATTAACTGTGTTTACAGTTTGTTTACCTCGTCATTGTTTAAGATTTTGAAATGAAAAGATTTATGATGGCTTGTTTCAGCACATTTTTAAATGGATAATGAAAATTGGAAAAAGAAAGAAAAATGACAAAGGTTATTATTATTATTATTTGTATTCAATTAGGATGAAAACAAAATTAACTTAATCAAACAATTGTTTTTGGTAGGAAGATGGATGTTTGCAGAAGTGAAACACAGGGATTTTTGGATCTTTTAATTGCTGCATTATACACAGCCTCTAGTTGGAGAGCCTAGTATTGAACTTACAATAACGATTATCTTAATTAGTTTATATTGGGGCGCTTCTTATAATCACTCTTGTTGTGGCTTGGGAGATGTTCTTTAAGCCTGCTCTTTGTAGCCTTGGATTCTAACTAGATTATTGTGTTTTCTTTTATACATGCTTGTTCTTATAAAAAAATGTTGTTGTATATGTATATTTATAATTGTCCTCTAGATAGTTATAGAGCTGCAATAGTTTTAGACCTTATAGAGCCTTGGTTTCTTGCAGGGTACATCTAACTGAACTTTTATGCTTCAATCTTTTGACCGTTCTTCAAGAGTGAGCAAATACTTCTGTCATAGTTGCAAGATCTTTGGTTTATCCTCTGTTGTAATTGGTAGCGGGCATCATTTTAGACTTAATAGTGCTATGAAAGAGATTAAAATCAAAGGTGGTTCTAATGCAGATCCTCATCCGTTAAACGATGAAACACATGCACAACTGTCTTGTGCTATTCAGGGATGCACAGCATCAAATGTGCAGTGCACCCCTGAAATTGAAAAGAAGTATGTGCATCGTGTTTATGATGCCATTGCACCCCACTTTAGTTCCACTCGATTTGCAAAGTGGCCAAAAGTTGCATCATTCTTATCCTCATTACCTCTAGGGTCTCTTGTCTTGGATGCTGGCTGTGGTAATGGAAAGTACTTGGGTTATAATTCCAACTGCTTTTTTATTGGATGTGATATTAGTGCCCAACTTATCAAAATTTGTAATGAACGGGGCCATGAAGTTTTGGTGGCTGACGCTGTAAATCTTCCTTACAGAACTGGTTTTGGTGATGCAGCCATCTCCATAGCTGTATTACATCATCTAAGTACAGAGAACAGGAGGAAGAAAGCAATTGAAGAATTAATACGCGTTGTCAAAAAAGGTGGCCTGGTTTTAATAACAGTCTGGGCTGTTGAGCAAGAGGACAAATCTTTATTGACGAAATGGATGCCACTTTCAGAGAAGTATGTTGAAGAGTGGGTTGGACCTGGTAGTCCACGCGTTCGTAGTCCATCATCAATGGCACTTGAAAGCATTCCTGAAATGAATGAAAATAATTCAGGTATTTGTCTAAAGGATTCTAAGGAAAACTTGACTGGAAGCATACCAGAAAATAAACCTCCACCCTCTCAAAGTGAAAATGATTTGGCGAATTGCAACCACGAAAACTTATTGAAGACCCAACAAGAGTATTTTGTCCCATGGCACTTACCTTATCATCGTGCGGAAGTCAGTGGCACGTCTGCCAGTGCCCTTGCTAGTGGTTTGGCAAAAAAAGATGATAAGAAAGCAGCTGTTGTGTATAACAGATACTATCATGTTTTCAGTGAAGGGGAACTTGAAGGGTATTCCTCTCCCTTATCTCTATTGTATGATTTGTTTTTCTGGTCTCCTGTCGATTGTTGCATTTGAGTGAGTCTCTTGAATACATTTCATTTCAGATGTGACTGTGCTGTTCTAGATCTAGTGTGTTCAATTGTGTCTTTTATTCCCTTCCTTCGATACTCTATGCATTACATAAGCCATATATTTTTGGCAGAAAACTAGCTGGATTAAAATTTTAATTTGCCAACTAAAAAAGTTGCAAGAAGCATCAGTAGCAGTAAAGTTCAGTTTTGCACATGGTAGTTGATACTGGTCCAGTTGATTACCCATAGTCCATTTTAGGAATGTATGGAGTGTAGTAAAGGGACCTAAAATTAAGCTTATCTTCTTTTGATGTCTAATTTTGGGTTATCAGTGGCATATATTAATTTGTTCCTGGAGCAGTGCCTTGTTACTAGTTCAAGTTCTATTACTATGTCATTAGGTTATAACTGGTAACCAGGATCATTCACAATTTCCTTATCATTCCTTCATTTGACTTAAGATGCCATCTCTGTAGAATTAGGGAACTCAATATATTGTAATTCAAGACATATTCTTTTTCGATTTCTTTATCCCTTTGATATACAAATACATTTCTACATAATAATTTGTTCTTTTACCTGCCTGTTCATCTTGGGCGCATTTGTAGGTTGATTTCTGGTATGGACAATGCTGTAGTAGTCGATCGTTTTTACGACAAATCAAACTGGTGTATAGTTCTTGAGAAGTTGGTGTGAGTATTTAAACGAGTTCATTGCCATAATGAAGATATGATTCGAGCATGTCTGCCTGCTGTGCGAACTCAAGTCAGGCTTTCAAAATAACTGGCCCTGGTAAGTAAACTGCTACCTTGGCTTTGTTCGTATCGTCCAGTAAAGGTGTGGGGATGGAAGATCTGCAGGCTCTCTTGGAGAAAATGCATGCACTGTAAGGATTTACAATTGTATTATGATGAATAATCCGCTGGATTGTCCTTTGGTTCAGTTCTAGATTATTTGCATTGAAAAAGTTGGGCTTCTTTCTAATAAAAACTTGTTTTTACCATCCCATCTCTTGAGAAAGTTTTTAGGAATAGACAGTTTAATTCCTTTGAGGCTCAGGTTTCTGGTGCAAGATTTTCTGGATTTAGAAAACACCAACTATAATTTGTTAATTTGTCAAATGGGATTGGTTAGATAGCATGGACCGTTTGTTGACGTTTAGTAGGTCACTATTTATGGGTGCAAGTGTAGCTTGTCAGTAGGGTTATCGTTTTCTTCCATAAAAATCCATCTTGAAGTTCAACCTTTTTCCTGCTTTGGTCACTGAGTCTTCATGTTGTAGTTTTTAGTATCACTGAGTTTTTGAGAATATGTGCATTTGGTCCTTTGATCCTTCAAGAGATGTTTGATCACTGAGTGAAGTTAGTAAATTTGTGTTTGGAGTGTAGAGTTGTAAGATCGAGTTTTTTTATTAATTGTGGATATTAGAGATAGAATTTATCTAAAAACATAAAAATTTGAAGAAATGAAAAGATGAAATTACTTGATCATGATGTTGATGTGTGCTAACTTCGTTAGTGTTGAGTTGTTTATTTCGTTAGTGATGTGTGCTAACCTCGTGATTATTAGCCCACTGGATATAAGGGTTTGGGACCCTAATCTTTTGCAGGGGTTCTCTTTTTTCCAGTGTATGGTTAACTCTTCCCCCTTGGGGGAGTTGGTCTTCTTTTCCGCGTAGAGGATTTAGGTTCCTAGAAAGGTGAGGTTTTTACTTGGCAGGTTCTTCATGATTGTATTAGTACGTTGGATAGGCTTTCAAGGAAGGTGTCGTCGTTAGTTGGGCCCTTTTGTTGTATTCTTTGTTTGAAGTTAAAGGAAGATGTAGACCATATTCTTTGGCATTGTGAGTCGCATTCAGCATTTCATATGTTCGTCATAGAGATGTTAGAGATATGATCGAGGAGTTCCTTCTCAATCTGTTCGGGTGGTTTTCTTTGGCACGCTAGTGTTTGTGCCGCACTATTAGTGTTGTGGGATGAGAGGAATAGGATTTGTGGAGAGGGGCAACGGTGAAATATGATCTCTATTCTTTATGAGAATTTGGTTTTAAAGACTTTGTTACTATCATTTAAACATGATTTTGTGTAGTTGGGATTCCCTTTGTGTAGTTGTCTCTTATATTTTGTGTGTCTTCATATTCTTTTTCTTAATAAAAATTGTTCTTATAAAAAAATATAAGCAATTGCCAAATGAAGCAAAACAATAATTTGAGTTTT ATGCTTCAATCTTTTGACCGTTCTTCAAGAGTGAGCAAATACTTCTGTCATAGTTGCAAGATCTTTGGTTTATCCTCTGTTGTAATTGGTAGCGGGCATCATTTTAGACTTAATAGTGCTATGAAAGAGATTAAAATCAAAGGTGGTTCTAATGCAGATCCTCATCCGTTAAACGATGAAACACATGCACAACTGTCTTGTGCTATTCAGGGATGCACAGCATCAAATGTGCAGTGCACCCCTGAAATTGAAAAGAAGTATGTGCATCGTGTTTATGATGCCATTGCACCCCACTTTAGTTCCACTCGATTTGCAAAGTGGCCAAAAGTTGCATCATTCTTATCCTCATTACCTCTAGGGTCTCTTGTCTTGGATGCTGGCTGTGGTAATGGAAAGTACTTGGGTTATAATTCCAACTGCTTTTTTATTGGATGTGATATTAGTGCCCAACTTATCAAAATTTGTAATGAACGGGGCCATGAAGTTTTGGTGGCTGACGCTGTAAATCTTCCTTACAGAACTGGTTTTGGTGATGCAGCCATCTCCATAGCTGTATTACATCATCTAAGTACAGAGAACAGGAGGAAGAAAGCAATTGAAGAATTAATACGCGTTGTCAAAAAAGGTGGCCTGGTTTTAATAACAGTCTGGGCTGTTGAGCAAGAGGACAAATCTTTATTGACGAAATGGATGCCACTTTCAGAGAAGTATGTTGAAGAGTGGGTTGGACCTGGTAGTCCACGCGTTCGTAGTCCATCATCAATGGCACTTGAAAGCATTCCTGAAATGAATGAAAATAATTCAGGTATTTGTCTAAAGGATTCTAAGGAAAACTTGACTGGAAGCATACCAGAAAATAAACCTCCACCCTCTCAAAGTGAAAATGATTTGGCGAATTGCAACCACGAAAACTTATTGAAGACCCAACAAGAGTATTTTGTCCCATGGCACTTACCTTATCATCGTGCGGAAGTCAGTGGCACGTCTGCCAGTGCCCTTGCTAGTGGTTTGGCAAAAAAAGATGATAAGAAAGCAGCTGTTGTGTATAACAGATACTATCATGTTTTCAGTGAAGGGGAACTTGAAGGGTTGATTTCTGGTATGGACAATGCTGTAGTAGTCGATCGTTTTTACGACAAATCAAACTGGTGTATAGTTCTTGAGAAGTTGGTGTGA ATGCTTCAATCTTTTGACCGTTCTTCAAGAGTGAGCAAATACTTCTGTCATAGTTGCAAGATCTTTGGTTTATCCTCTGTTGTAATTGGTAGCGGGCATCATTTTAGACTTAATAGTGCTATGAAAGAGATTAAAATCAAAGGTGGTTCTAATGCAGATCCTCATCCGTTAAACGATGAAACACATGCACAACTGTCTTGTGCTATTCAGGGATGCACAGCATCAAATGTGCAGTGCACCCCTGAAATTGAAAAGAAGTATGTGCATCGTGTTTATGATGCCATTGCACCCCACTTTAGTTCCACTCGATTTGCAAAGTGGCCAAAAGTTGCATCATTCTTATCCTCATTACCTCTAGGGTCTCTTGTCTTGGATGCTGGCTGTGGTAATGGAAAGTACTTGGGTTATAATTCCAACTGCTTTTTTATTGGATGTGATATTAGTGCCCAACTTATCAAAATTTGTAATGAACGGGGCCATGAAGTTTTGGTGGCTGACGCTGTAAATCTTCCTTACAGAACTGGTTTTGGTGATGCAGCCATCTCCATAGCTGTATTACATCATCTAAGTACAGAGAACAGGAGGAAGAAAGCAATTGAAGAATTAATACGCGTTGTCAAAAAAGGTGGCCTGGTTTTAATAACAGTCTGGGCTGTTGAGCAAGAGGACAAATCTTTATTGACGAAATGGATGCCACTTTCAGAGAAGTATGTTGAAGAGTGGGTTGGACCTGGTAGTCCACGCGTTCGTAGTCCATCATCAATGGCACTTGAAAGCATTCCTGAAATGAATGAAAATAATTCAGGTATTTGTCTAAAGGATTCTAAGGAAAACTTGACTGGAAGCATACCAGAAAATAAACCTCCACCCTCTCAAAGTGAAAATGATTTGGCGAATTGCAACCACGAAAACTTATTGAAGACCCAACAAGAGTATTTTGTCCCATGGCACTTACCTTATCATCGTGCGGAAGTCAGTGGCACGTCTGCCAGTGCCCTTGCTAGTGGTTTGGCAAAAAAAGATGATAAGAAAGCAGCTGTTGTGTATAACAGATACTATCATGTTTTCAGTGAAGGGGAACTTGAAGGGTTGATTTCTGGTATGGACAATGCTGTAGTAGTCGATCGTTTTTACGACAAATCAAACTGGTGTATAGTTCTTGAGAAGTTGGTGTGA MLQSFDRSSRVSKYFCHSCKIFGLSSVVIGSGHHFRLNSAMKEIKIKGGSNADPHPLNDETHAQLSCAIQGCTASNVQCTPEIEKKYVHRVYDAIAPHFSSTRFAKWPKVASFLSSLPLGSLVLDAGCGNGKYLGYNSNCFFIGCDISAQLIKICNERGHEVLVADAVNLPYRTGFGDAAISIAVLHHLSTENRRKKAIEELIRVVKKGGLVLITVWAVEQEDKSLLTKWMPLSEKYVEEWVGPGSPRVRSPSSMALESIPEMNENNSGICLKDSKENLTGSIPENKPPPSQSENDLANCNHENLLKTQQEYFVPWHLPYHRAEVSGTSASALASGLAKKDDKKAAVVYNRYYHVFSEGELEGLISGMDNAVVVDRFYDKSNWCIVLEKLV
BLAST of CsaV3_2G033630 vs. NCBI nr
Match: XP_004138641.1 (PREDICTED: alkylated DNA repair protein alkB homolog 8 [Cucumis sativus] >KGN63118.1 hypothetical protein Csa_2G403730 [Cucumis sativus]) HSP 1 Score: 800.0 bits (2065), Expect = 3.5e-228 Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 0
BLAST of CsaV3_2G033630 vs. NCBI nr
Match: XP_008441246.1 (PREDICTED: alkylated DNA repair protein alkB homolog 8 [Cucumis melo]) HSP 1 Score: 766.9 bits (1979), Expect = 3.3e-218 Identity = 374/391 (95.65%), Postives = 382/391 (97.70%), Query Frame = 0
BLAST of CsaV3_2G033630 vs. NCBI nr
Match: XP_023549866.1 (alkylated DNA repair protein alkB homolog 8-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023549867.1 alkylated DNA repair protein alkB homolog 8-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 708.0 bits (1826), Expect = 1.8e-200 Identity = 349/383 (91.12%), Postives = 359/383 (93.73%), Query Frame = 0
BLAST of CsaV3_2G033630 vs. NCBI nr
Match: XP_022939523.1 (alkylated DNA repair protein alkB homolog 8-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 704.9 bits (1818), Expect = 1.5e-199 Identity = 351/390 (90.00%), Postives = 362/390 (92.82%), Query Frame = 0
BLAST of CsaV3_2G033630 vs. NCBI nr
Match: XP_022939521.1 (alkylated DNA repair protein alkB homolog 8-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 704.9 bits (1818), Expect = 1.5e-199 Identity = 351/390 (90.00%), Postives = 362/390 (92.82%), Query Frame = 0
BLAST of CsaV3_2G033630 vs. TAIR10
Match: AT1G36310.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 435.6 bits (1119), Expect = 3.1e-122 Identity = 232/380 (61.05%), Postives = 258/380 (67.89%), Query Frame = 0
BLAST of CsaV3_2G033630 vs. Swiss-Prot
Match: sp|Q94A09|TRM9_ARATH (tRNA (carboxymethyluridine(34)-5-O)-methyltransferase OS=Arabidopsis thaliana OX=3702 GN=TRM9 PE=1 SV=1) HSP 1 Score: 435.6 bits (1119), Expect = 5.7e-121 Identity = 232/380 (61.05%), Postives = 258/380 (67.89%), Query Frame = 0
BLAST of CsaV3_2G033630 vs. Swiss-Prot
Match: sp|Q07G10|ALKB8_XENTR (Alkylated DNA repair protein alkB homolog 8 OS=Xenopus tropicalis OX=8364 GN=alkbh8 PE=2 SV=2) HSP 1 Score: 222.6 bits (566), Expect = 7.5e-57 Identity = 126/309 (40.78%), Postives = 173/309 (55.99%), Query Frame = 0
BLAST of CsaV3_2G033630 vs. Swiss-Prot
Match: sp|Q80Y20|ALKB8_MOUSE (Alkylated DNA repair protein alkB homolog 8 OS=Mus musculus OX=10090 GN=Alkbh8 PE=1 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 2.2e-56 Identity = 121/310 (39.03%), Postives = 175/310 (56.45%), Query Frame = 0
BLAST of CsaV3_2G033630 vs. Swiss-Prot
Match: sp|A1A4L5|ALKB8_BOVIN (Alkylated DNA repair protein alkB homolog 8 OS=Bos taurus OX=9913 GN=ALKBH8 PE=2 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 2.7e-54 Identity = 121/318 (38.05%), Postives = 174/318 (54.72%), Query Frame = 0
BLAST of CsaV3_2G033630 vs. Swiss-Prot
Match: sp|Q95K79|ALKB8_MACFA (Alkylated DNA repair protein alkB homolog 8 OS=Macaca fascicularis OX=9541 GN=ALKBH8 PE=2 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 5.0e-53 Identity = 114/319 (35.74%), Postives = 171/319 (53.61%), Query Frame = 0
BLAST of CsaV3_2G033630 vs. TrEMBL
Match: tr|A0A0A0LMT8|A0A0A0LMT8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G403730 PE=4 SV=1) HSP 1 Score: 800.0 bits (2065), Expect = 2.3e-228 Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 0
BLAST of CsaV3_2G033630 vs. TrEMBL
Match: tr|A0A1S3B3R5|A0A1S3B3R5_CUCME (alkylated DNA repair protein alkB homolog 8 OS=Cucumis melo OX=3656 GN=LOC103485433 PE=4 SV=1) HSP 1 Score: 766.9 bits (1979), Expect = 2.2e-218 Identity = 374/391 (95.65%), Postives = 382/391 (97.70%), Query Frame = 0
BLAST of CsaV3_2G033630 vs. TrEMBL
Match: tr|A0A251RGA2|A0A251RGA2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G509000 PE=4 SV=1) HSP 1 Score: 526.6 bits (1355), Expect = 4.9e-146 Identity = 271/386 (70.21%), Postives = 309/386 (80.05%), Query Frame = 0
BLAST of CsaV3_2G033630 vs. TrEMBL
Match: tr|B9RJD9|B9RJD9_RICCO (S-adenosylmethionine-dependent methyltransferase, putative OS=Ricinus communis OX=3988 GN=RCOM_1033330 PE=4 SV=1) HSP 1 Score: 526.2 bits (1354), Expect = 6.4e-146 Identity = 269/386 (69.69%), Postives = 308/386 (79.79%), Query Frame = 0
BLAST of CsaV3_2G033630 vs. TrEMBL
Match: tr|A0A1Q3AUS4|A0A1Q3AUS4_CEPFO (Methyltransf_11 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_02834 PE=4 SV=1) HSP 1 Score: 522.7 bits (1345), Expect = 7.1e-145 Identity = 262/386 (67.88%), Postives = 310/386 (80.31%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |