CsaV3_2G032890 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_2G032890
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Ulp1 protease family, C-terminal catalytic domain containing protein
Location	chr2 : 21732286 .. 21733565 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGATGATAAAGAGAAGTTTAGGAGTTATCCTTGGGGAAGGTTGTGCTATAGTTTGACAAAGCAATTCATTCAAAATGCTGTAAAATCCAAAAGGAAGTCGAAAAACTCAGAATTAGAATCTAAATCATGTACCTTTTTACAAGGCTTCCCTATAGTTCTTGCTTATTGGGCATACAAAATACTTCCTCAACTTGCTAATGGATATGTGACGAGAATAGGAAAAGGCTGCCCTAGAATATTAAATTGGAAATCCATTGTACAAGTAGATTGGCAAGATCTTGAAGCCAACGTGTTTCTGGAAAAAAATGTAAGTTTTTAATTTGTTTTCTTTTTGTCACCAATATCACTGATATTGTACAAAGATAGTCTCGTATACTAAGATACATAGACTCCATCCATCTCATATTAGTCTCAAAATCAACAACCGTATATGCTTTTCCACATCTAAAAAAGAGCTTATCCAATTATAGGGTCCTTATACATCAACTTCAAACTTTTTAGAAGGTGTTGCAAAGAAACGCAATATTCAGTATTTGAAAAAACGTTATGAACACTTTTCAGAATACTTAAATGTCGATAAGATATTACAACTAAACCTTCCTGATCCCCTAAACTTTTCTTTATATTCTCAAAAAACCATCTCCAGGATTCATCAATTTCAGAATCTACAATACTGAAGGCCAATTGAAAATTTTGATTATTACCATCAATTGTTGAGGCCGTCAAAAGAGTTCCACTATATTTAGATTTCAAAAAAGTGTCATCAATAGATATGTTGGGTCTACAATATTTCCATCCTTCAATGGATGCTCCAATAGCCATAAAACAATACTTAAAATGTCCCTTGTATCAGTTTCATAAGCAGTGAATGAACCTGAAATAAAAAATACATATATACATTATATCAAAGACAAATAACATGTTCTTTTACTTTATATCTGTCACTGATGTATTCTATCACTGATACTTTATAATAATTAGCACATCACTAGAACTATGTAACTAATATGGTTTATCATTGATAAGGACTATCACTGACACGTGCTATCACCAATAGAACCTATAGTAAACCCCCATATCGTCAGTTTGATGATATACTCATTCACTATCACTGATACGATCTATCACTAATAGATCCTATAGTAAACCACCATGTCATCAGTCTCATGATATGTTCATTTACTATCACTGATAGGTCTTACAGTAAACCACCATGTCATCTGCTCATTTACTATCAATGAGACGATATCTATCAGTGATAGATCTTATCAGTGA

mRNA sequence

ATGTTGGATGATAAAGAGAAGTTTAGGAGTTATCCTTGGGGAAGGTTGTGCTATAGTTTGACAAAGCAATTCATTCAAAATGCTGTAAAATCCAAAAGGAAGTCGAAAAACTCAGAATTAGAATCTAAATCATGTACCTTTTTACAAGGCTTCCCTATAGTTCTTGCTTATTGGGCATACAAAATACTTCCTCAACTTGCTAATGGATATGTGACGAGAATAGGAAAAGGCTGCCCTAGAATATTAAATTGGAAATCCATTGTACAAGTAGATTGGCAAGATCTTGAAGCCAACGTGTTTCTGGAAAAAAATGTAAGTCTTACAGTAAACCACCATGTCATCTGCTCATTTACTATCAATGAGACGATATCTATCAGTGATAGATCTTATCAGTGA

Coding sequence (CDS)

ATGTTGGATGATAAAGAGAAGTTTAGGAGTTATCCTTGGGGAAGGTTGTGCTATAGTTTGACAAAGCAATTCATTCAAAATGCTGTAAAATCCAAAAGGAAGTCGAAAAACTCAGAATTAGAATCTAAATCATGTACCTTTTTACAAGGCTTCCCTATAGTTCTTGCTTATTGGGCATACAAAATACTTCCTCAACTTGCTAATGGATATGTGACGAGAATAGGAAAAGGCTGCCCTAGAATATTAAATTGGAAATCCATTGTACAAGTAGATTGGCAAGATCTTGAAGCCAACGTGTTTCTGGAAAAAAATGTAAGTCTTACAGTAAACCACCATGTCATCTGCTCATTTACTATCAATGAGACGATATCTATCAGTGATAGATCTTATCAGTGA

Protein sequence

MLDDKEKFRSYPWGRLCYSLTKQFIQNAVKSKRKSKNSELESKSCTFLQGFPIVLAYWAYKILPQLANGYVTRIGKGCPRILNWKSIVQVDWQDLEANVFLEKNVSLTVNHHVICSFTINETISISDRSYQ

Homology

[Close]

BLAST of CsaV3_2G032890 vs. NCBI nr
Match: XP_008460281.1 (PREDICTED: uncharacterized protein LOC103499154 isoform X1 [Cucumis melo])

HSP 1 Score: 161.8 bits (408), Expect = 1.6e-36
Identity = 74/86 (86.05%), Postives = 81/86 (94.19%), Query Frame = 0


Query: 1   MLDDKEKFRSYPWGRLCYSLTKQFIQNAVKSKRKSKNSELESKSCTFLQGFPIVLAYWAY 60
           MLDDKEKFR+YPWGRLC+SLTKQFIQNAVKSKRKSKNSE ESK+  FLQGFP+VLAYWAY
Sbjct: 56  MLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNSETESKAYAFLQGFPMVLAYWAY 115

Query: 61  KILPQLANGYVTRIGKGCPRILNWKS 87
           +I PQLA+ YVTRIGKGCPRILNW+S
Sbjct: 116 EIPPQLASRYVTRIGKGCPRILNWES 141

[Close]

BLAST of CsaV3_2G032890 vs. NCBI nr
Match: XP_008460282.1 (PREDICTED: uncharacterized protein LOC103499154 isoform X2 [Cucumis melo])

HSP 1 Score: 161.8 bits (408), Expect = 1.6e-36
Identity = 74/86 (86.05%), Postives = 81/86 (94.19%), Query Frame = 0


Query: 1   MLDDKEKFRSYPWGRLCYSLTKQFIQNAVKSKRKSKNSELESKSCTFLQGFPIVLAYWAY 60
           MLDDKEKFR+YPWGRLC+SLTKQFIQNAVKSKRKSKNSE ESK+  FLQGFP+VLAYWAY
Sbjct: 29  MLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNSETESKAYAFLQGFPMVLAYWAY 88

Query: 61  KILPQLANGYVTRIGKGCPRILNWKS 87
           +I PQLA+ YVTRIGKGCPRILNW+S
Sbjct: 89  EIPPQLASRYVTRIGKGCPRILNWES 114

[Close]

BLAST of CsaV3_2G032890 vs. NCBI nr
Match: XP_008440207.1 (PREDICTED: uncharacterized protein LOC103484737 isoform X1 [Cucumis melo])

HSP 1 Score: 87.8 bits (216), Expect = 3.0e-14
Identity = 42/103 (40.78%), Postives = 58/103 (56.31%), Query Frame = 0


Query: 1   MLDDKEKFRSYPWGRLCYSLTKQFIQNAVKSKRKSKNSELESKSCTFLQGFPIVLAYWAY 60
           ++DDKE+F SYPWGR+ Y +T  F++ A+KS            S   + GFP  L  WAY
Sbjct: 746 LIDDKEQFDSYPWGRISYEITIDFVKKAIKS---------NDASAIGVGGFPFALCVWAY 805

Query: 61  KILPQLA---NGYVTRIGKGCPRILNWKSIVQVDWQDLEANVF 101
           + +P LA   N +  RI  G PR+ NW + V  +W+DL   VF
Sbjct: 806 ETIPLLALNSNFFAMRISFGTPRMNNWAADVHPEWKDLSEKVF 839

[Close]

BLAST of CsaV3_2G032890 vs. NCBI nr
Match: XP_008440208.1 (PREDICTED: uncharacterized protein LOC103484737 isoform X2 [Cucumis melo])

HSP 1 Score: 87.8 bits (216), Expect = 3.0e-14
Identity = 42/103 (40.78%), Postives = 58/103 (56.31%), Query Frame = 0


Query: 1   MLDDKEKFRSYPWGRLCYSLTKQFIQNAVKSKRKSKNSELESKSCTFLQGFPIVLAYWAY 60
           ++DDKE+F SYPWGR+ Y +T  F++ A+KS            S   + GFP  L  WAY
Sbjct: 744 LIDDKEQFDSYPWGRISYEITIDFVKKAIKS---------NDASAIGVGGFPFALCVWAY 803

Query: 61  KILPQLA---NGYVTRIGKGCPRILNWKSIVQVDWQDLEANVF 101
           + +P LA   N +  RI  G PR+ NW + V  +W+DL   VF
Sbjct: 804 ETIPLLALNSNFFAMRISFGTPRMNNWAADVHPEWKDLSEKVF 837

[Close]

BLAST of CsaV3_2G032890 vs. NCBI nr
Match: XP_008440209.1 (PREDICTED: uncharacterized protein LOC103484737 isoform X4 [Cucumis melo])

HSP 1 Score: 87.8 bits (216), Expect = 3.0e-14
Identity = 42/103 (40.78%), Postives = 58/103 (56.31%), Query Frame = 0


Query: 1   MLDDKEKFRSYPWGRLCYSLTKQFIQNAVKSKRKSKNSELESKSCTFLQGFPIVLAYWAY 60
           ++DDKE+F SYPWGR+ Y +T  F++ A+KS            S   + GFP  L  WAY
Sbjct: 728 LIDDKEQFDSYPWGRISYEITIDFVKKAIKS---------NDASAIGVGGFPFALCVWAY 787

Query: 61  KILPQLA---NGYVTRIGKGCPRILNWKSIVQVDWQDLEANVF 101
           + +P LA   N +  RI  G PR+ NW + V  +W+DL   VF
Sbjct: 788 ETIPLLALNSNFFAMRISFGTPRMNNWAADVHPEWKDLSEKVF 821

[Close]

BLAST of CsaV3_2G032890 vs. TrEMBL
Match: tr|A0A1S3CCL6|A0A1S3CCL6_CUCME (uncharacterized protein LOC103499154 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499154 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.1e-36
Identity = 74/86 (86.05%), Postives = 81/86 (94.19%), Query Frame = 0


Query: 1   MLDDKEKFRSYPWGRLCYSLTKQFIQNAVKSKRKSKNSELESKSCTFLQGFPIVLAYWAY 60
           MLDDKEKFR+YPWGRLC+SLTKQFIQNAVKSKRKSKNSE ESK+  FLQGFP+VLAYWAY
Sbjct: 29  MLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNSETESKAYAFLQGFPMVLAYWAY 88

Query: 61  KILPQLANGYVTRIGKGCPRILNWKS 87
           +I PQLA+ YVTRIGKGCPRILNW+S
Sbjct: 89  EIPPQLASRYVTRIGKGCPRILNWES 114

[Close]

BLAST of CsaV3_2G032890 vs. TrEMBL
Match: tr|A0A1S3CC52|A0A1S3CC52_CUCME (uncharacterized protein LOC103499154 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499154 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.1e-36
Identity = 74/86 (86.05%), Postives = 81/86 (94.19%), Query Frame = 0


Query: 1   MLDDKEKFRSYPWGRLCYSLTKQFIQNAVKSKRKSKNSELESKSCTFLQGFPIVLAYWAY 60
           MLDDKEKFR+YPWGRLC+SLTKQFIQNAVKSKRKSKNSE ESK+  FLQGFP+VLAYWAY
Sbjct: 56  MLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNSETESKAYAFLQGFPMVLAYWAY 115

Query: 61  KILPQLANGYVTRIGKGCPRILNWKS 87
           +I PQLA+ YVTRIGKGCPRILNW+S
Sbjct: 116 EIPPQLASRYVTRIGKGCPRILNWES 141

[Close]

BLAST of CsaV3_2G032890 vs. TrEMBL
Match: tr|A0A1S3B0K0|A0A1S3B0K0_CUCME (uncharacterized protein LOC103484737 isoform X6 OS=Cucumis melo OX=3656 GN=LOC103484737 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.0e-14
Identity = 42/103 (40.78%), Postives = 58/103 (56.31%), Query Frame = 0


Query: 1   MLDDKEKFRSYPWGRLCYSLTKQFIQNAVKSKRKSKNSELESKSCTFLQGFPIVLAYWAY 60
           ++DDKE+F SYPWGR+ Y +T  F++ A+KS            S   + GFP  L  WAY
Sbjct: 710 LIDDKEQFDSYPWGRISYEITIDFVKKAIKS---------NDASAIGVGGFPFALCVWAY 769

Query: 61  KILPQLA---NGYVTRIGKGCPRILNWKSIVQVDWQDLEANVF 101
           + +P LA   N +  RI  G PR+ NW + V  +W+DL   VF
Sbjct: 770 ETIPLLALNSNFFAMRISFGTPRMNNWAADVHPEWKDLSEKVF 803

[Close]

BLAST of CsaV3_2G032890 vs. TrEMBL
Match: tr|A0A1S4DTS6|A0A1S4DTS6_CUCME (uncharacterized protein LOC103484737 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484737 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.0e-14
Identity = 42/103 (40.78%), Postives = 58/103 (56.31%), Query Frame = 0


Query: 1   MLDDKEKFRSYPWGRLCYSLTKQFIQNAVKSKRKSKNSELESKSCTFLQGFPIVLAYWAY 60
           ++DDKE+F SYPWGR+ Y +T  F++ A+KS            S   + GFP  L  WAY
Sbjct: 744 LIDDKEQFDSYPWGRISYEITIDFVKKAIKS---------NDASAIGVGGFPFALCVWAY 803

Query: 61  KILPQLA---NGYVTRIGKGCPRILNWKSIVQVDWQDLEANVF 101
           + +P LA   N +  RI  G PR+ NW + V  +W+DL   VF
Sbjct: 804 ETIPLLALNSNFFAMRISFGTPRMNNWAADVHPEWKDLSEKVF 837

[Close]

BLAST of CsaV3_2G032890 vs. TrEMBL
Match: tr|A0A1S3B0L9|A0A1S3B0L9_CUCME (uncharacterized protein LOC103484737 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103484737 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.0e-14
Identity = 42/103 (40.78%), Postives = 58/103 (56.31%), Query Frame = 0


Query: 1   MLDDKEKFRSYPWGRLCYSLTKQFIQNAVKSKRKSKNSELESKSCTFLQGFPIVLAYWAY 60
           ++DDKE+F SYPWGR+ Y +T  F++ A+KS            S   + GFP  L  WAY
Sbjct: 712 LIDDKEQFDSYPWGRISYEITIDFVKKAIKS---------NDASAIGVGGFPFALCVWAY 771

Query: 61  KILPQLA---NGYVTRIGKGCPRILNWKSIVQVDWQDLEANVF 101
           + +P LA   N +  RI  G PR+ NW + V  +W+DL   VF
Sbjct: 772 ETIPLLALNSNFFAMRISFGTPRMNNWAADVHPEWKDLSEKVF 805

The following BLAST results are available for this feature:

BLAST of CsaV3_2G032890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460281.1	1.6e-36	86.05	PREDICTED: uncharacterized protein LOC103499154 isoform X1 [Cucumis melo]	[more]
XP_008460282.1	1.6e-36	86.05	PREDICTED: uncharacterized protein LOC103499154 isoform X2 [Cucumis melo]	[more]
XP_008440207.1	3.0e-14	40.78	PREDICTED: uncharacterized protein LOC103484737 isoform X1 [Cucumis melo]	[more]
XP_008440208.1	3.0e-14	40.78	PREDICTED: uncharacterized protein LOC103484737 isoform X2 [Cucumis melo]	[more]
XP_008440209.1	3.0e-14	40.78	PREDICTED: uncharacterized protein LOC103484737 isoform X4 [Cucumis melo]	[more]

BLAST of CsaV3_2G032890 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsaV3_2G032890 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_2G032890 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CCL6\|A0A1S3CCL6_CUCME	1.1e-36	86.05	uncharacterized protein LOC103499154 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3CC52\|A0A1S3CC52_CUCME	1.1e-36	86.05	uncharacterized protein LOC103499154 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3B0K0\|A0A1S3B0K0_CUCME	2.0e-14	40.78	uncharacterized protein LOC103484737 isoform X6 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S4DTS6\|A0A1S4DTS6_CUCME	2.0e-14	40.78	uncharacterized protein LOC103484737 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3B0L9\|A0A1S3B0L9_CUCME	2.0e-14	40.78	uncharacterized protein LOC103484737 isoform X5 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G032890.1	CsaV3_2G032890.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_2G032890	CsGy2G024120	Cucumber (Gy14) v2	cgybcucB065

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_2G032890	Silver-seed gourd	carcucB0289
CsaV3_2G032890	Silver-seed gourd	carcucB0720
CsaV3_2G032890	Cucumber (Gy14) v1	cgycucB247
CsaV3_2G032890	Cucurbita maxima (Rimu)	cmacucB0328
CsaV3_2G032890	Cucurbita maxima (Rimu)	cmacucB0828
CsaV3_2G032890	Cucurbita moschata (Rifu)	cmocucB0323
CsaV3_2G032890	Cucurbita moschata (Rifu)	cmocucB0813
CsaV3_2G032890	Cucurbita moschata (Rifu)	cmocucB0925
CsaV3_2G032890	Cucurbita pepo (Zucchini)	cpecucB0193
CsaV3_2G032890	Cucurbita pepo (Zucchini)	cpecucB0483
CsaV3_2G032890	Wild cucumber (PI 183967)	cpicucB081
CsaV3_2G032890	Bottle gourd (USVL1VR-Ls)	cuclsiB157
CsaV3_2G032890	Melon (DHL92) v3.5.1	cucmeB125
CsaV3_2G032890	Melon (DHL92) v3.6.1	cucmedB119
CsaV3_2G032890	Watermelon (Charleston Gray)	cucwcgB174
CsaV3_2G032890	Watermelon (97103) v1	cucwmB122
CsaV3_2G032890	Watermelon (97103) v2	cucwmbB161
CsaV3_2G032890	Wax gourd	cucwgoB176