CsGy2G024120 (gene) Cucumber (Gy14) v2

Overview
NameCsGy2G024120
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr2 : 31876211 .. 31876714 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCAAAATACTTTTACAACTTTTAGCACAATTGATTAGAAGACAATGTGTCTCAACAGACAACAATGCTATTCTTTTCAACATTGAAGGTAAAACTATGGAATTTGGTTTGCAAGATTTTTATTTGATTACAGGGTTAAATTGTTGTGAATACCCTATTGAGGATGTTTTGGATACAACAGAAGAAAATGAGTCGATGGTTAAACAATTGTTTTTTAGAAACAATACTTCTATTAGTAGACAAGAATTGAAAATTGCTTTTAACTATCACTGTAAAACCTGTAGTGATAAGCAAGAATTAGCCAAATTAGCCAATCTTTACTTCCTATACAATGTTTTGATTCCTAGACAAAATCACAATATTTTGGATTTGAAACATGTAAAAATGTTGGATGATAAAGAGAAGTTTAGGAGTTATCCTTGGGGAAGGTTGTGCTATAGTTTGACAAAGCAATTCATACAAAATGCTGTAAAATCCGAAAGGAAGTCGAAAAACTCATAA

mRNA sequence

ATGTCCAAAATACTTTTACAACTTTTAGCACAATTGATTAGAAGACAATGTGTCTCAACAGACAACAATGCTATTCTTTTCAACATTGAAGGGTTAAATTGTTGTGAATACCCTATTGAGGATGTTTTGGATACAACAGAAGAAAATGAGTCGATGGTTAAACAATTGTTTTTTAGAAACAATACTTCTATTAGTAGACAAGAATTGAAAATTGCTTTTAACTATCACTGTAAAACCTGTAGTGATAAGCAAGAATTAGCCAAATTAGCCAATCTTTACTTCCTATACAATGTTTTGATTCCTAGACAAAATCACAATATTTTGGATTTGAAACATGTAAAAATGTTGGATGATAAAGAGAAGTTTAGGAGTTATCCTTGGGGAAGGTTGTGCTATAGTTTGACAAAGCAATTCATACAAAATGCTGTAAAATCCGAAAGGAAGTCGAAAAACTCATAA

Coding sequence (CDS)

ATGTCCAAAATACTTTTACAACTTTTAGCACAATTGATTAGAAGACAATGTGTCTCAACAGACAACAATGCTATTCTTTTCAACATTGAAGGGTTAAATTGTTGTGAATACCCTATTGAGGATGTTTTGGATACAACAGAAGAAAATGAGTCGATGGTTAAACAATTGTTTTTTAGAAACAATACTTCTATTAGTAGACAAGAATTGAAAATTGCTTTTAACTATCACTGTAAAACCTGTAGTGATAAGCAAGAATTAGCCAAATTAGCCAATCTTTACTTCCTATACAATGTTTTGATTCCTAGACAAAATCACAATATTTTGGATTTGAAACATGTAAAAATGTTGGATGATAAAGAGAAGTTTAGGAGTTATCCTTGGGGAAGGTTGTGCTATAGTTTGACAAAGCAATTCATACAAAATGCTGTAAAATCCGAAAGGAAGTCGAAAAACTCATAA

Protein sequence

MSKILLQLLAQLIRRQCVSTDNNAILFNIEGLNCCEYPIEDVLDTTEENESMVKQLFFRNNTSISRQELKIAFNYHCKTCSDKQELAKLANLYFLYNVLIPRQNHNILDLKHVKMLDDKEKFRSYPWGRLCYSLTKQFIQNAVKSERKSKNS
Homology
[Close]
BLAST of CsGy2G024120 vs. NCBI nr
Match: XP_008460281.1 (PREDICTED: uncharacterized protein LOC103499154 isoform X1 [Cucumis melo])

HSP 1 Score: 164.9 bits (416), Expect = 2.2e-37
Identity = 82/101 (81.19%), Postives = 88/101 (87.13%), Query Frame = 0 

Query: 52  MVKQLFFRNNTSISRQELKIAFNYHCKTCSDKQELAKLANLYFLYNVLIPRQNHNILDLK 111
           MVKQL FRNNTSISRQELK AFNYH K+C D++EL KLANLYFLYNVLIPRQNHN     
Sbjct: 1   MVKQLLFRNNTSISRQELKTAFNYHFKSCIDEEELVKLANLYFLYNVLIPRQNHN----- 60

Query: 112 HVKMLDDKEKFRSYPWGRLCYSLTKQFIQNAVKSERKSKNS 153
              MLDDKEKFR+YPWGRLC+SLTKQFIQNAVKS+RKSKNS
Sbjct: 61  ---MLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNS 93

[Close]
BLAST of CsGy2G024120 vs. NCBI nr
Match: XP_024031030.1 (uncharacterized protein LOC21394043 [Morus notabilis] >XP_024031031.1 uncharacterized protein LOC21394043 [Morus notabilis] >XP_024031032.1 uncharacterized protein LOC21394043 [Morus notabilis] >XP_024031033.1 uncharacterized protein LOC21394043 [Morus notabilis])

HSP 1 Score: 92.0 bits (227), Expect = 1.8e-15
Identity = 56/161 (34.78%), Postives = 83/161 (51.55%), Query Frame = 0 

Query: 1   MSKILLQLLAQLIRRQCVSTDNNAILFNIE---------------GLNCCEYPIEDVLDT 60
           + K   QL+  LI RQC     N + F+IE               GLNC  YP    +  
Sbjct: 136 IKKFPSQLIHHLILRQCPQAKKNELWFDIEGAIVKFGMKEFALITGLNCSNYPF---IFE 195

Query: 61  TEENESMVKQLFFRNNTSISRQELKIAFNYHCKTCSDKQELAKLANLYFLYNVLIPRQNH 120
            +  ES  K+ FFR   S+ R +L   F          +++ KLA LY L ++LIP++  
Sbjct: 196 KQLPESTTKRKFFRKGKSVQRIKLNDVF--RANRGGTDEDIVKLAKLYCLESLLIPKKIE 255

Query: 121 NILDLKHVKMLDDKEKFRSYPWGRLCYSLTKQFIQNAVKSE 147
           N +D  H+KM+D+ E F +YPWGRL Y +T  +I+ ++KS+
Sbjct: 256 NNIDPNHLKMVDNPELFDNYPWGRLSYEMTIAYIKRSIKSQ 291

[Close]
BLAST of CsGy2G024120 vs. NCBI nr
Match: EXC30509.1 (hypothetical protein L484_010758 [Morus notabilis])

HSP 1 Score: 92.0 bits (227), Expect = 1.8e-15
Identity = 56/161 (34.78%), Postives = 83/161 (51.55%), Query Frame = 0 

Query: 1   MSKILLQLLAQLIRRQCVSTDNNAILFNIE---------------GLNCCEYPIEDVLDT 60
           + K   QL+  LI RQC     N + F+IE               GLNC  YP    +  
Sbjct: 136 IKKFPSQLIHHLILRQCPQAKKNELWFDIEGAIVKFGMKEFALITGLNCSNYPF---IFE 195

Query: 61  TEENESMVKQLFFRNNTSISRQELKIAFNYHCKTCSDKQELAKLANLYFLYNVLIPRQNH 120
            +  ES  K+ FFR   S+ R +L   F          +++ KLA LY L ++LIP++  
Sbjct: 196 KQLPESTTKRKFFRKGKSVQRIKLNDVF--RANRGGTDEDIVKLAKLYCLESLLIPKKIE 255

Query: 121 NILDLKHVKMLDDKEKFRSYPWGRLCYSLTKQFIQNAVKSE 147
           N +D  H+KM+D+ E F +YPWGRL Y +T  +I+ ++KS+
Sbjct: 256 NNIDPNHLKMVDNPELFDNYPWGRLSYEMTIAYIKRSIKSQ 291

[Close]
BLAST of CsGy2G024120 vs. NCBI nr
Match: XP_008460282.1 (PREDICTED: uncharacterized protein LOC103499154 isoform X2 [Cucumis melo])

HSP 1 Score: 82.0 bits (201), Expect = 1.9e-12
Identity = 40/51 (78.43%), Postives = 43/51 (84.31%), Query Frame = 0 

Query: 102 RQNHNILDLKHVKMLDDKEKFRSYPWGRLCYSLTKQFIQNAVKSERKSKNS 153
           RQNHN        MLDDKEKFR+YPWGRLC+SLTKQFIQNAVKS+RKSKNS
Sbjct: 24  RQNHN--------MLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNS 66

[Close]
BLAST of CsGy2G024120 vs. NCBI nr
Match: XP_008440207.1 (PREDICTED: uncharacterized protein LOC103484737 isoform X1 [Cucumis melo])

HSP 1 Score: 81.3 bits (199), Expect = 3.2e-12
Identity = 51/164 (31.10%), Postives = 83/164 (50.61%), Query Frame = 0 

Query: 1   MSKILLQLLAQLIRRQCVSTDNNAILFNIE---------------GLNCCEYPIEDVLDT 60
           +SK   QL   LIRRQC S + + + FN+E               GLNC E P    +D 
Sbjct: 622 VSKFSSQLFYHLIRRQCCSKNRHELWFNLEGRIHKFGMKDFALITGLNCGELP---AIDM 681

Query: 61  TEENESMVKQLFFRNNTSISRQELKIAFNYHCKTCSDKQELAKLANLYFLYNVLIPRQNH 120
           ++  +    + +F    +I R +L   F    K     +++ K+A LY L   ++ +Q  
Sbjct: 682 SKIQKGKFNKRYFGGEKTIRRTKLHEVFTEMDK--GRNKDVVKMAKLYILEMFILGKQLR 741

Query: 121 NILDLKHVKMLDDKEKFRSYPWGRLCYSLTKQFIQNAVKSERKS 150
             ++ ++  ++DDKE+F SYPWGR+ Y +T  F++ A+KS   S
Sbjct: 742 TGINHEYTLLIDDKEQFDSYPWGRISYEITIDFVKKAIKSNDAS 780

[Close]
BLAST of CsGy2G024120 vs. TrEMBL
Match: tr|A0A1S3CC52|A0A1S3CC52_CUCME (uncharacterized protein LOC103499154 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499154 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.5e-37
Identity = 82/101 (81.19%), Postives = 88/101 (87.13%), Query Frame = 0 

Query: 52  MVKQLFFRNNTSISRQELKIAFNYHCKTCSDKQELAKLANLYFLYNVLIPRQNHNILDLK 111
           MVKQL FRNNTSISRQELK AFNYH K+C D++EL KLANLYFLYNVLIPRQNHN     
Sbjct: 1   MVKQLLFRNNTSISRQELKTAFNYHFKSCIDEEELVKLANLYFLYNVLIPRQNHN----- 60

Query: 112 HVKMLDDKEKFRSYPWGRLCYSLTKQFIQNAVKSERKSKNS 153
              MLDDKEKFR+YPWGRLC+SLTKQFIQNAVKS+RKSKNS
Sbjct: 61  ---MLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNS 93

[Close]
BLAST of CsGy2G024120 vs. TrEMBL
Match: tr|W9SF50|W9SF50_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_010758 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.2e-15
Identity = 56/161 (34.78%), Postives = 83/161 (51.55%), Query Frame = 0 

Query: 1   MSKILLQLLAQLIRRQCVSTDNNAILFNIE---------------GLNCCEYPIEDVLDT 60
           + K   QL+  LI RQC     N + F+IE               GLNC  YP    +  
Sbjct: 136 IKKFPSQLIHHLILRQCPQAKKNELWFDIEGAIVKFGMKEFALITGLNCSNYPF---IFE 195

Query: 61  TEENESMVKQLFFRNNTSISRQELKIAFNYHCKTCSDKQELAKLANLYFLYNVLIPRQNH 120
            +  ES  K+ FFR   S+ R +L   F          +++ KLA LY L ++LIP++  
Sbjct: 196 KQLPESTTKRKFFRKGKSVQRIKLNDVF--RANRGGTDEDIVKLAKLYCLESLLIPKKIE 255

Query: 121 NILDLKHVKMLDDKEKFRSYPWGRLCYSLTKQFIQNAVKSE 147
           N +D  H+KM+D+ E F +YPWGRL Y +T  +I+ ++KS+
Sbjct: 256 NNIDPNHLKMVDNPELFDNYPWGRLSYEMTIAYIKRSIKSQ 291

[Close]
BLAST of CsGy2G024120 vs. TrEMBL
Match: tr|A0A1S3CCL6|A0A1S3CCL6_CUCME (uncharacterized protein LOC103499154 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499154 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.2e-12
Identity = 40/51 (78.43%), Postives = 43/51 (84.31%), Query Frame = 0 

Query: 102 RQNHNILDLKHVKMLDDKEKFRSYPWGRLCYSLTKQFIQNAVKSERKSKNS 153
           RQNHN        MLDDKEKFR+YPWGRLC+SLTKQFIQNAVKS+RKSKNS
Sbjct: 24  RQNHN--------MLDDKEKFRNYPWGRLCFSLTKQFIQNAVKSKRKSKNS 66

[Close]
BLAST of CsGy2G024120 vs. TrEMBL
Match: tr|A0A1S3B0K0|A0A1S3B0K0_CUCME (uncharacterized protein LOC103484737 isoform X6 OS=Cucumis melo OX=3656 GN=LOC103484737 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.1e-12
Identity = 51/164 (31.10%), Postives = 83/164 (50.61%), Query Frame = 0 

Query: 1   MSKILLQLLAQLIRRQCVSTDNNAILFNIE---------------GLNCCEYPIEDVLDT 60
           +SK   QL   LIRRQC S + + + FN+E               GLNC E P    +D 
Sbjct: 586 VSKFSSQLFYHLIRRQCCSKNRHELWFNLEGRIHKFGMKDFALITGLNCGELP---AIDM 645

Query: 61  TEENESMVKQLFFRNNTSISRQELKIAFNYHCKTCSDKQELAKLANLYFLYNVLIPRQNH 120
           ++  +    + +F    +I R +L   F    K     +++ K+A LY L   ++ +Q  
Sbjct: 646 SKIQKGKFNKRYFGGEKTIRRTKLHEVFTEMDK--GRNKDVVKMAKLYILEMFILGKQLR 705

Query: 121 NILDLKHVKMLDDKEKFRSYPWGRLCYSLTKQFIQNAVKSERKS 150
             ++ ++  ++DDKE+F SYPWGR+ Y +T  F++ A+KS   S
Sbjct: 706 TGINHEYTLLIDDKEQFDSYPWGRISYEITIDFVKKAIKSNDAS 744

[Close]
BLAST of CsGy2G024120 vs. TrEMBL
Match: tr|A0A1S4DTS6|A0A1S4DTS6_CUCME (uncharacterized protein LOC103484737 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484737 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.1e-12
Identity = 51/164 (31.10%), Postives = 83/164 (50.61%), Query Frame = 0 

Query: 1   MSKILLQLLAQLIRRQCVSTDNNAILFNIE---------------GLNCCEYPIEDVLDT 60
           +SK   QL   LIRRQC S + + + FN+E               GLNC E P    +D 
Sbjct: 620 VSKFSSQLFYHLIRRQCCSKNRHELWFNLEGRIHKFGMKDFALITGLNCGELP---AIDM 679

Query: 61  TEENESMVKQLFFRNNTSISRQELKIAFNYHCKTCSDKQELAKLANLYFLYNVLIPRQNH 120
           ++  +    + +F    +I R +L   F    K     +++ K+A LY L   ++ +Q  
Sbjct: 680 SKIQKGKFNKRYFGGEKTIRRTKLHEVFTEMDK--GRNKDVVKMAKLYILEMFILGKQLR 739

Query: 121 NILDLKHVKMLDDKEKFRSYPWGRLCYSLTKQFIQNAVKSERKS 150
             ++ ++  ++DDKE+F SYPWGR+ Y +T  F++ A+KS   S
Sbjct: 740 TGINHEYTLLIDDKEQFDSYPWGRISYEITIDFVKKAIKSNDAS 778

The following BLAST results are available for this feature:
BLAST of CsGy2G024120 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008460281.12.2e-3781.19PREDICTED: uncharacterized protein LOC103499154 isoform X1 [Cucumis melo][more]
XP_024031030.11.8e-1534.78uncharacterized protein LOC21394043 [Morus notabilis] >XP_024031031.1 uncharacte... [more]
EXC30509.11.8e-1534.78hypothetical protein L484_010758 [Morus notabilis][more]
XP_008460282.11.9e-1278.43PREDICTED: uncharacterized protein LOC103499154 isoform X2 [Cucumis melo][more]
XP_008440207.13.2e-1231.10PREDICTED: uncharacterized protein LOC103484737 isoform X1 [Cucumis melo][more]
BLAST of CsGy2G024120 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy2G024120 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy2G024120 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CC52|A0A1S3CC52_CUCME1.5e-3781.19uncharacterized protein LOC103499154 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|W9SF50|W9SF50_9ROSA1.2e-1534.78Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_010758 PE=4 SV=1[more]
tr|A0A1S3CCL6|A0A1S3CCL6_CUCME1.2e-1278.43uncharacterized protein LOC103499154 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S3B0K0|A0A1S3B0K0_CUCME2.1e-1231.10uncharacterized protein LOC103484737 isoform X6 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S4DTS6|A0A1S4DTS6_CUCME2.1e-1231.10uncharacterized protein LOC103484737 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR015410DUF1985
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G024120.1CsGy2G024120.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015410Domain of unknown function DUF1985PFAMPF09331DUF1985coord: 28..135
e-value: 1.9E-18
score: 66.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy2G024120CsaV3_2G032890Cucumber (Chinese Long) v3cgybcucB065
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy2G024120Cucurbita maxima (Rimu)cgybcmaB192
CsGy2G024120Cucurbita maxima (Rimu)cgybcmaB249
CsGy2G024120Cucurbita moschata (Rifu)cgybcmoB185
CsGy2G024120Cucurbita moschata (Rifu)cgybcmoB237
CsGy2G024120Cucurbita pepo (Zucchini)cgybcpeB182
CsGy2G024120Cucurbita pepo (Zucchini)cgybcpeB215
CsGy2G024120Cucumber (Chinese Long) v2cgybcuB057
CsGy2G024120Bottle gourd (USVL1VR-Ls)cgyblsiB132
CsGy2G024120Melon (DHL92) v3.5.1cgybmeB104
CsGy2G024120Melon (DHL92) v3.6.1cgybmedB103
CsGy2G024120Watermelon (Charleston Gray)cgybwcgB153
CsGy2G024120Watermelon (97103) v1cgybwmB106
CsGy2G024120Wild cucumber (PI 183967)cgybcpiB057
CsGy2G024120Silver-seed gourdcarcgybB0273
CsGy2G024120Silver-seed gourdcarcgybB0681
CsGy2G024120Watermelon (97103) v2cgybwmbB154
CsGy2G024120Wax gourdcgybwgoB164