CsaV3_2G026500 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCCTTTTTCCTTTTATCATTAAACCATAGTCTTGATTTTTGGTTGGCTACAGTAGTTGGTTCTCATGGTTCATCTATCTCAAATTGAAGTTAGTTTGTTTTTATTTTCCACCAAAGTTCAAATTATGTGTAAGAATGGAATATCCATACTGATGAAACCTTAATTACATGAGATATAAAATAGTAAGGCATAAAAATTATAGAATTGAAATTGTGGATTAGAGAATTGCGTTGTAAAGGCGCAAAGCAAATTTGGGCAAATCCTAATCCTCTCCTCTCCTCACATGCGTGACAGTTGACACCATCCCCTCCCTCCCCCTTATGTAGGTAGGATTCATATTTTATTTATCTCCTTATCCTTCTAAGCTTGGCTTAGTTTATGGATGGCTCTATAAACTAATTATGCAATTTGCAATTCCTTCCTTTCTTTTTCTTTAAAAAAAGAGATCAAATTGTTAGATTAGATAGACAGACAGAGCGACAGACGATTGAATTTGTCGGCCATCTTTGAGTTTGTCCCTTCACCTCTCGACGACGTGGTGGCAGTCACCAATTCTCCAATTCTCCAATTCACACACTCCTTCTCTTCCTCTAATTCTTTACATATAAAACAAATACACACACACCCAACTTCATTCCTTCCCCCCTTATCAAACGCCGACCCCTCCAGTACACCAATTCCAACTCTTTCTCTTCCACTTTTCCTTCACTCTCCTTCCTGACTCGGTCTCTTCATACTATGGTTGTTGTATAATTTTGCTCTCGTATCATGGAAGAATCCGTAGAAACGACTATTCCGGAGAAGCGCAAGCAATCGGGGCGACAAGAGAAGCCATACAGAGGAATTAGGATGAGGAAATGGGGAAAATGGGTAGCTGAGATCAGAGAGCCAAACAAGAGGTCTAGGATTTGGCTTGGTTCTTACACAACCCCTCTCGCCGCTGCTAGAGCCTACGACACCGCAGTCTTCTACTTACGAGGTCCATCCGCCCGTCTCAACTTTCCGGACCTGATTTTACAAGACATGGATCACCAGCTTCTTGACGTTTCACCTTCTTCAATCCGAAAAAGAGCGATTGAGGTGGGTGCCAGAGTGGACGCCGCCGCTCATCAAACTTCTCTCCGCCAATCCAAACCCATCTCAGACAAGCCCGATTTGAACCAGTTTCCGGACCCGGAAAGCTCTGGTGAAGATTAATCCATGATCACTGTTTCATAGCCTTTTCCACTTCTGTATTTTCCCCTGTTTTTTTTTCTTTTCCATATCTCCCACTCCAAAAAGAGATTCAAACCCTTGAGATTTTGGAAATTAAAAAATGGGATGGACCCATATGGTTCCCTTCTTGATTTGCTATATATCTAAAAATATAGCTTCAAATTTGTAACAGGGGAGATGGTAAACCAAATATGTTGATCGATCCCTACAGTAATCTATCTTAATTTTTTTTGTTGCCTGCATTATTTTCTTGTGATTAGTATAGATTTCTTTTTTCTTTTTTTACATGTTCCGGAAAAATGGGTGTCCGTTTGAAAAGAGATGGAAAAGAAAGAGAGAGAGAAAGAGAGAGAGAAAGAAAAAAGGGTAAAAGGAAAATGCGGCGTTGATTGGTGAAAATTTTGATAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATAAGGATGAGTTAGTATTATGAGGGGCCGCCGTGTGGAGTCCACAAATCGAAGGATAATGTGGGCGTCTCCGTCGTCATGGTGGATGTTTTGGTTGCGAAACGGAAACGGAAACGGAAACCGATATTTGTTCTAGAAGGTCGGTGGTATTTTAATTTTATTTATTATATAGTTTAGATGGGCAAAGGTGAAGGCTGACACCACCCAACGGTGCTTTTTTTTTTAACTCATTTCTTTTGGGGTTTTCCCAAACATTATAAACCCGACCGACCACTTCCCACTTACCTCCCATTCTCATTTTATTATATTTCAAATCCTTCCTTTCATCTTTATCTTATTGCTTCCTCTATTATTATCATTCACCCATAAATATCTTTAAACATTCTTCAATCCTTACCTAATCCTCAGGTGCCAAACCATAATACACTCTTTTCTCTTTTGCCTTTTAACTTTCAAAATTGGCCCTCACCTCTTCTATTCACCTCAATAGAAGAATAAAACACAATTGCAAATTGCAAATTTCACTACTTTCTTTTTATAATCTTTTACTATTTCTCACCTTATTTTATCTTTTACTATTTCTCACTTTAACTAAAATTTCTTACCATTTTTTAATAACTTCTAGAACCATCTTTCTTAATTTCCATAATCTAAAAGAAGATGACCATGAAATAAATGAACCAAAGTTTATTAGAACTTGACCTAAATGTTACTATGTATTTTGAGTTTCTCAACTAGGCCCAAAATGAATGGGCCATGAGACCACATTGAGCCCAACTATTTCTCTCACTCTCACTCTAAAGAA ATGGAAGAATCCGTAGAAACGACTATTCCGGAGAAGCGCAAGCAATCGGGGCGACAAGAGAAGCCATACAGAGGAATTAGGATGAGGAAATGGGGAAAATGGGTAGCTGAGATCAGAGAGCCAAACAAGAGGTCTAGGATTTGGCTTGGTTCTTACACAACCCCTCTCGCCGCTGCTAGAGCCTACGACACCGCAGTCTTCTACTTACGAGGTCCATCCGCCCGTCTCAACTTTCCGGACCTGATTTTACAAGACATGGATCACCAGCTTCTTGACGTTTCACCTTCTTCAATCCGAAAAAGAGCGATTGAGGTGGGTGCCAGAGTGGACGCCGCCGCTCATCAAACTTCTCTCCGCCAATCCAAACCCATCTCAGACAAGCCCGATTTGAACCAGTTTCCGGACCCGGAAAGCTCTGGTGAAGATTAA ATGGAAGAATCCGTAGAAACGACTATTCCGGAGAAGCGCAAGCAATCGGGGCGACAAGAGAAGCCATACAGAGGAATTAGGATGAGGAAATGGGGAAAATGGGTAGCTGAGATCAGAGAGCCAAACAAGAGGTCTAGGATTTGGCTTGGTTCTTACACAACCCCTCTCGCCGCTGCTAGAGCCTACGACACCGCAGTCTTCTACTTACGAGGTCCATCCGCCCGTCTCAACTTTCCGGACCTGATTTTACAAGACATGGATCACCAGCTTCTTGACGTTTCACCTTCTTCAATCCGAAAAAGAGCGATTGAGGTGGGTGCCAGAGTGGACGCCGCCGCTCATCAAACTTCTCTCCGCCAATCCAAACCCATCTCAGACAAGCCCGATTTGAACCAGTTTCCGGACCCGGAAAGCTCTGGTGAAGATTAA MEESVETTIPEKRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQSKPISDKPDLNQFPDPESSGED
BLAST of CsaV3_2G026500 vs. NCBI nr
Match: XP_004142875.1 (PREDICTED: ethylene-responsive transcription factor RAP2-1 [Cucumis sativus] >KGN62486.1 hypothetical protein Csa_2G356600 [Cucumis sativus]) HSP 1 Score: 283.1 bits (723), Expect = 5.2e-73 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of CsaV3_2G026500 vs. NCBI nr
Match: XP_008444599.1 (PREDICTED: ethylene-responsive transcription factor RAP2-1 [Cucumis melo]) HSP 1 Score: 279.3 bits (713), Expect = 7.6e-72 Identity = 140/142 (98.59%), Postives = 141/142 (99.30%), Query Frame = 0
BLAST of CsaV3_2G026500 vs. NCBI nr
Match: XP_022962377.1 (ethylene-responsive transcription factor RAP2-1-like [Cucurbita moschata] >XP_023545716.1 ethylene-responsive transcription factor RAP2-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 259.6 bits (662), Expect = 6.2e-66 Identity = 131/143 (91.61%), Postives = 140/143 (97.90%), Query Frame = 0
BLAST of CsaV3_2G026500 vs. NCBI nr
Match: XP_022997304.1 (ethylene-responsive transcription factor RAP2-1-like [Cucurbita maxima]) HSP 1 Score: 258.5 bits (659), Expect = 1.4e-65 Identity = 130/143 (90.91%), Postives = 140/143 (97.90%), Query Frame = 0
BLAST of CsaV3_2G026500 vs. NCBI nr
Match: XP_022131468.1 (ethylene-responsive transcription factor RAP2-1-like [Momordica charantia]) HSP 1 Score: 223.8 bits (569), Expect = 3.8e-55 Identity = 118/133 (88.72%), Postives = 121/133 (90.98%), Query Frame = 0
BLAST of CsaV3_2G026500 vs. TAIR10
Match: AT1G46768.1 (related to AP2 1) HSP 1 Score: 162.9 bits (411), Expect = 1.4e-40 Identity = 90/149 (60.40%), Postives = 105/149 (70.47%), Query Frame = 0
BLAST of CsaV3_2G026500 vs. TAIR10
Match: AT4G06746.1 (related to AP2 9) HSP 1 Score: 144.4 bits (363), Expect = 5.3e-35 Identity = 80/138 (57.97%), Postives = 97/138 (70.29%), Query Frame = 0
BLAST of CsaV3_2G026500 vs. TAIR10
Match: AT5G67190.1 (DREB and EAR motif protein 2) HSP 1 Score: 141.7 bits (356), Expect = 3.4e-34 Identity = 85/177 (48.02%), Postives = 105/177 (59.32%), Query Frame = 0
BLAST of CsaV3_2G026500 vs. TAIR10
Match: AT2G23340.1 (DREB and EAR motif protein 3) HSP 1 Score: 141.4 bits (355), Expect = 4.5e-34 Identity = 79/146 (54.11%), Postives = 96/146 (65.75%), Query Frame = 0
BLAST of CsaV3_2G026500 vs. TAIR10
Match: AT3G50260.1 (cooperatively regulated by ethylene and jasmonate 1) HSP 1 Score: 141.4 bits (355), Expect = 4.5e-34 Identity = 77/137 (56.20%), Postives = 99/137 (72.26%), Query Frame = 0
BLAST of CsaV3_2G026500 vs. Swiss-Prot
Match: sp|Q8LC30|RAP21_ARATH (Ethylene-responsive transcription factor RAP2-1 OS=Arabidopsis thaliana OX=3702 GN=RAP2-1 PE=2 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 2.6e-39 Identity = 90/149 (60.40%), Postives = 105/149 (70.47%), Query Frame = 0
BLAST of CsaV3_2G026500 vs. Swiss-Prot
Match: sp|Q8W3M3|RAP29_ARATH (Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana OX=3702 GN=RAP2-9 PE=2 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 9.5e-34 Identity = 80/138 (57.97%), Postives = 97/138 (70.29%), Query Frame = 0
BLAST of CsaV3_2G026500 vs. Swiss-Prot
Match: sp|Q9FH94|ERF10_ARATH (Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana OX=3702 GN=ERF010 PE=2 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 6.2e-33 Identity = 85/177 (48.02%), Postives = 105/177 (59.32%), Query Frame = 0
BLAST of CsaV3_2G026500 vs. Swiss-Prot
Match: sp|O22174|ERF08_ARATH (Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 GN=ERF008 PE=2 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 8.0e-33 Identity = 79/146 (54.11%), Postives = 96/146 (65.75%), Query Frame = 0
BLAST of CsaV3_2G026500 vs. Swiss-Prot
Match: sp|Q9SNE1|ERF11_ARATH (Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana OX=3702 GN=ERF011 PE=2 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 8.0e-33 Identity = 77/137 (56.20%), Postives = 99/137 (72.26%), Query Frame = 0
BLAST of CsaV3_2G026500 vs. TrEMBL
Match: tr|A0A0A0LR87|A0A0A0LR87_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G356600 PE=4 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 3.5e-73 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of CsaV3_2G026500 vs. TrEMBL
Match: tr|A0A1S3BAR1|A0A1S3BAR1_CUCME (ethylene-responsive transcription factor RAP2-1 OS=Cucumis melo OX=3656 GN=LOC103487870 PE=4 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 5.0e-72 Identity = 140/142 (98.59%), Postives = 141/142 (99.30%), Query Frame = 0
BLAST of CsaV3_2G026500 vs. TrEMBL
Match: tr|A0A2N9H6F9|A0A2N9H6F9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35113 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 4.7e-46 Identity = 102/146 (69.86%), Postives = 116/146 (79.45%), Query Frame = 0
BLAST of CsaV3_2G026500 vs. TrEMBL
Match: tr|A0A2I4EKJ1|A0A2I4EKJ1_9ROSI (ethylene-responsive transcription factor RAP2-1-like OS=Juglans regia OX=51240 GN=LOC108990403 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 5.2e-45 Identity = 94/127 (74.02%), Postives = 107/127 (84.25%), Query Frame = 0
BLAST of CsaV3_2G026500 vs. TrEMBL
Match: tr|A0A125R6G9|A0A125R6G9_BETPL (ERF11 OS=Betula platyphylla OX=78630 PE=2 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 8.9e-45 Identity = 97/135 (71.85%), Postives = 109/135 (80.74%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |