CsaV3_2G024220 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G024220
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionnucleolar GTP-binding protein 2
Locationchr2 : 16814517 .. 16816460 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAAACTCGAAATAGTTCGAAAGAGAAAGAAAAGAAAAGTGAACGGTGAATAAGAAAAGCAAAGACATTGTAAGACACCCCATTACAGAAAGATCAAAAAAGGGATAAAGAAGTAAAGAATGGTTTAAGAAATTAAATAAACTAAAGGAAAAGAGAGAGAGAGAGAGATGTGATGATAAAAGAAGAAAAAGTGAAGCATAAGCTGTCCTTTAATATTTCTTTCTTTTCTTTTCTTTTCTTTTTAAATCTCTTAAACCCCAAATTCATTCATTCATTCATTCTGTCTATCACAAATTCACAAATTATGAGATCCATGAAGAGAAGAAATCACTCCAAATCAAAACCCACTGCTCCACCGGCCGATCTTCTCGTCTGTTTTCCTGCACGTGCTCATCTCACTCTTCTCCCAAGTCCCGCCAGACCTCCCGCCGAACCCCATCGTCGTCACTACCGGAAAGCTCAACCAAGTCCTCTTCCATGGGCTAAGGAGATGTCGTCGGAGCCCACTTCCCCCAAGGTCACCTGCGCCGGCCAGATCAAAATCAGACCTCATTCTCATCGATCAACCAAGAATTGGCAATCGGTTATGGAAGAAATCGAGCGAATTCACAACAAAAAGAAAAATCCAATTCGAAATCAAAATCCTTTCGGTTTCAAGAGAGAAATTGTTAATTTCCTCTCGTGTTTACGGGGATTCCGTTTTGATTTCCGTTGTTTCAGAGGCTTCCCTCAATCCGACATTACAACAGATGATGAGGATGATGAAGAAGAAGTATTCGAACAACACGAACCCGAATCCGAATCCCAATCAGAATCAGAAGAAGAACCCACAAGAGGAAGAACGATGTTCTCAGAATGGTTCATGGTTTTACAGGAAGGCGAAGAAGAAACCAAACCCATAAACAACGACGCCGTTTCTTCACTCGAATTCCAACCTTCCTCTGTTTCTGTTCCTCCCCCAAATGCTCTCTTACTTATGCGTTGCAGGTCAGCCCCAAATTCTCTTTTACGAAAACCAAAACAACAAGAAGAAAAAGAATTAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAATCGAAAATCAGCTTGAAGTTGTTAATGGAGGAAGAGAAAGAAATGGTGACTGCGAAGAAGAAAAGCTTGATGGTAATGGATTATGATGCTGATTTTTACAAACTTTCATCAGACATTGCTAAAGAAACATGGGTTGTGAGTGGATCAAGTACCAGTAGTAGTAGTAGTAGATGTAATGACGATCCATTGTTGAGAAGTCGAAGCTGGAAGAGATGATGAAGATCGAACAACTCAAATCAATAAAAAATTAAAAGAAAAAACTCTTGTGCTCTGCTTCCCTTGTTTTCTAATTTCCATGAAATTTCTGCCAAGAACTTGAAAACCCCACATGAGATTTTTGAAGATCTGATATGGGTTTTGTTTACTTTCTTTGAATCTGTAATAGATTAATATGAACATGATGTACAGTGAAATTTTACGATTATCTTAATTTTCAGCTTCAAAGCTTTCATTGACTTAAGTTCTGACAGTGTTCATAAATCTGACCAAATTTTCTTTGTTCTTTTTTGTTTTGGAAATTTGGGCATTGAGGAATCTTAATCTACATCTCTATCTTTCTAATTTTAAATGAATCTCACTACCAAATACAAATACTTGAGATCCAATTAGATAAATTGTTCGAAGATCGAGATTAGACGATTAGATATAGCATAGTATAATCCCAAATGCACTTTATGTCAATCAAATCCTTATTCGTTTTTCCTCTCGTCCTTTATAACTTTTTTTCTTTTTACTTTAAATAAGAAGAGAATTCTTTGAATCTCTACCCTTCACAGCAACTGACTATTTTTGTTCTAAATTCTTAACTTCATCTATTGTGTTTTAGACTTCAAAATATACATGGTCGGCTCTTATTGTGACAATACAAT

mRNA sequence

ATGATAAAAGAAGAAAAAGTGAAGCATAAGCTGTCCTTTAATATTTCTTTCTTTTCTTTTCTTTTCTTTTTAAATCTCTTAAACCCCAAATTCATTCATTCATTCATTCTGTCTATCACAAATTCACAAATTATGAGATCCATGAAGAGAAGAAATCACTCCAAATCAAAACCCACTGCTCCACCGGCCGATCTTCTCGTCTGTTTTCCTGCACGTGCTCATCTCACTCTTCTCCCAAGTCCCGCCAGACCTCCCGCCGAACCCCATCGTCGTCACTACCGGAAAGCTCAACCAAGTCCTCTTCCATGGGCTAAGGAGATGTCGTCGGAGCCCACTTCCCCCAAGGTCACCTGCGCCGGCCAGATCAAAATCAGACCTCATTCTCATCGATCAACCAAGAATTGGCAATCGGTTATGGAAGAAATCGAGCGAATTCACAACAAAAAGAAAAATCCAATTCGAAATCAAAATCCTTTCGGTTTCAAGAGAGAAATTGTTAATTTCCTCTCGTGTTTACGGGGATTCCGTTTTGATTTCCGTTGTTTCAGAGGCTTCCCTCAATCCGACATTACAACAGATGATGAGGATGATGAAGAAGAAGTATTCGAACAACACGAACCCGAATCCGAATCCCAATCAGAATCAGAAGAAGAACCCACAAGAGGAAGAACGATGTTCTCAGAATGGTTCATGGTTTTACAGGAAGGCGAAGAAGAAACCAAACCCATAAACAACGACGCCGTTTCTTCACTCGAATTCCAACCTTCCTCTGTTTCTGTTCCTCCCCCAAATGCTCTCTTACTTATGCGTTGCAGGTCAGCCCCAAATTCTCTTTTACGAAAACCAAAACAACAAGAAGAAAAAGAATTAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAATCGAAAATCAGCTTGAAGTTGTTAATGGAGGAAGAGAAAGAAATGGTGACTGCGAAGAAGAAAAGCTTGATGGTAATGGATTATGATGCTGATTTTTACAAACTTTCATCAGACATTGCTAAAGAAACATGGGTTGTGAGTGGATCAAGTACCAGTAGTAGTAGTAGTAGATGTAATGACGATCCATTGTTGAGAAGTCGAAGCTGGAAGAGATGA

Coding sequence (CDS)

ATGATAAAAGAAGAAAAAGTGAAGCATAAGCTGTCCTTTAATATTTCTTTCTTTTCTTTTCTTTTCTTTTTAAATCTCTTAAACCCCAAATTCATTCATTCATTCATTCTGTCTATCACAAATTCACAAATTATGAGATCCATGAAGAGAAGAAATCACTCCAAATCAAAACCCACTGCTCCACCGGCCGATCTTCTCGTCTGTTTTCCTGCACGTGCTCATCTCACTCTTCTCCCAAGTCCCGCCAGACCTCCCGCCGAACCCCATCGTCGTCACTACCGGAAAGCTCAACCAAGTCCTCTTCCATGGGCTAAGGAGATGTCGTCGGAGCCCACTTCCCCCAAGGTCACCTGCGCCGGCCAGATCAAAATCAGACCTCATTCTCATCGATCAACCAAGAATTGGCAATCGGTTATGGAAGAAATCGAGCGAATTCACAACAAAAAGAAAAATCCAATTCGAAATCAAAATCCTTTCGGTTTCAAGAGAGAAATTGTTAATTTCCTCTCGTGTTTACGGGGATTCCGTTTTGATTTCCGTTGTTTCAGAGGCTTCCCTCAATCCGACATTACAACAGATGATGAGGATGATGAAGAAGAAGTATTCGAACAACACGAACCCGAATCCGAATCCCAATCAGAATCAGAAGAAGAACCCACAAGAGGAAGAACGATGTTCTCAGAATGGTTCATGGTTTTACAGGAAGGCGAAGAAGAAACCAAACCCATAAACAACGACGCCGTTTCTTCACTCGAATTCCAACCTTCCTCTGTTTCTGTTCCTCCCCCAAATGCTCTCTTACTTATGCGTTGCAGGTCAGCCCCAAATTCTCTTTTACGAAAACCAAAACAACAAGAAGAAAAAGAATTAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAATCGAAAATCAGCTTGAAGTTGTTAATGGAGGAAGAGAAAGAAATGGTGACTGCGAAGAAGAAAAGCTTGATGGTAATGGATTATGATGCTGATTTTTACAAACTTTCATCAGACATTGCTAAAGAAACATGGGTTGTGAGTGGATCAAGTACCAGTAGTAGTAGTAGTAGATGTAATGACGATCCATTGTTGAGAAGTCGAAGCTGGAAGAGATGA

Protein sequence

MIKEEKVKHKLSFNISFFSFLFFLNLLNPKFIHSFILSITNSQIMRSMKRRNHSKSKPTAPPADLLVCFPARAHLTLLPSPARPPAEPHRRHYRKAQPSPLPWAKEMSSEPTSPKVTCAGQIKIRPHSHRSTKNWQSVMEEIERIHNKKKNPIRNQNPFGFKREIVNFLSCLRGFRFDFRCFRGFPQSDITTDDEDDEEEVFEQHEPESESQSESEEEPTRGRTMFSEWFMVLQEGEEETKPINNDAVSSLEFQPSSVSVPPPNALLLMRCRSAPNSLLRKPKQQEEKELEEEEEEEEEEKSKISLKLLMEEEKEMVTAKKKSLMVMDYDADFYKLSSDIAKETWVVSGSSTSSSSSRCNDDPLLRSRSWKR
Homology
[Close]
BLAST of CsaV3_2G024220 vs. NCBI nr
Match: XP_008445342.2 (PREDICTED: uncharacterized protein LOC103488403 [Cucumis melo])

HSP 1 Score: 456.1 bits (1172), Expect = 1.2e-124
Identity = 307/325 (94.46%), Postives = 308/325 (94.77%), Query Frame = 0 

Query: 48  MKRRNHSKSKPTAPPADLLVCFPARAHLTLLPSPARPPAEPHRRHYRKAQPSPLPWAKEM 107
           MKRRNHSKSKPTAPPADLLVCFPARAHLTLLPSPAR PAEPHRRHYRKAQPSPLPWAKEM
Sbjct: 1   MKRRNHSKSKPTAPPADLLVCFPARAHLTLLPSPARAPAEPHRRHYRKAQPSPLPWAKEM 60

Query: 108 SSEPTSPKVTCAGQIKIRPHSHRSTKNWQSVMEEIERIHNKKKNPIRNQNPFGFKREIVN 167
           SSEPTSPKVTCAGQIKIRPH+HRSTKNWQSVMEEIERIHNKKKNPIRNQNP GFKREIVN
Sbjct: 61  SSEPTSPKVTCAGQIKIRPHAHRSTKNWQSVMEEIERIHNKKKNPIRNQNPLGFKREIVN 120

Query: 168 FLSCLRGFRFDFRCFRGFPQSDITTDXXXXXXXXXXXXXXXXXXXXXXXXXXTRGRTMFS 227
           FLSCLRGFRFDFRCFRGFPQSDITTDXXXXXXXXXXXXXXXXXXXXXXXXXX RGRTMFS
Sbjct: 121 FLSCLRGFRFDFRCFRGFPQSDITTDXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRTMFS 180

Query: 228 EWFMVLQEGEEETKPINNDAVSSLEFQPSSVSVPPPNALLLMRCRSAPNSLXXXXXXXXX 287
           EWFMVLQE EEETKPINNDAVSSLEFQPSSVSVPPPNALLLMRCRSAPNSL         
Sbjct: 181 EWFMVLQEEEEETKPINNDAVSSLEFQPSSVSVPPPNALLLMRCRSAPNSL-----LRKP 240

Query: 288 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDYDADFYKLSSDIAKETWVV 347
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    ADFYKLSSDIAKETWVV
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADFYKLSSDIAKETWVV 300

Query: 348 SGSSTSSSSSRCNDDPLLRSRSWKR 373
           SGSSTSSSSSRCNDDPLLRSRSWKR
Sbjct: 301 SGSSTSSSSSRCNDDPLLRSRSWKR 320

[Close]
BLAST of CsaV3_2G024220 vs. NCBI nr
Match: XP_004143011.2 (PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2-like [Cucumis sativus] >KGN62249.1 hypothetical protein Csa_2G345900 [Cucumis sativus])

HSP 1 Score: 445.7 bits (1145), Expect = 1.6e-121
Identity = 312/330 (94.55%), Postives = 312/330 (94.55%), Query Frame = 0 

Query: 45  MRSMKRRNHSKSKPTAPPADLLVCFPARAHLTLLPSPARPPAEPHRRHYRKAQPSPLPWA 104
           MRSMKRRNHSKSKPTAPPADLLVCFPARAHLTLLPSPARPPAEPHRRHYRKAQPSPLPWA
Sbjct: 1   MRSMKRRNHSKSKPTAPPADLLVCFPARAHLTLLPSPARPPAEPHRRHYRKAQPSPLPWA 60

Query: 105 KEMSSEPTSPKVTCAGQIKIRPHSHRSTKNWQSVMEEIERIHNKKKNPIRNQNPFGFKRE 164
           KEMSSEPTSPKVTCAGQIKIRPHSHRSTKNWQSVMEEIERIHNKKKNPIRNQNPFGFKRE
Sbjct: 61  KEMSSEPTSPKVTCAGQIKIRPHSHRSTKNWQSVMEEIERIHNKKKNPIRNQNPFGFKRE 120

Query: 165 IVNFLSCLRGFRFDFRCFRGFPQSDITTDXXXXXXXXXXXXXXXXXXXXXXXXXXTRGRT 224
           IVNFLSCLRGFRFDFRCFRGFPQSDITTDXXXXXXXXXXXXXXXXXXXXXXXXXXTRGRT
Sbjct: 121 IVNFLSCLRGFRFDFRCFRGFPQSDITTDXXXXXXXXXXXXXXXXXXXXXXXXXXTRGRT 180

Query: 225 MFSEWFMVLQEGEEETKPINNDAVSSLEFQPSSVSVPP--PNALLLMRCRSAPNSLXXXX 284
           MFSEWFMVLQEGEEETKPINNDAVSSLEFQPSSVSVPP                  XXXX
Sbjct: 181 MFSEWFMVLQEGEEETKPINNDAVSSLEFQPSSVSVPPXXXXXXXXXXXXXXXXXXXXXX 240

Query: 285 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDYDADFYKLSSDIAK 344
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDYDADFYKLSSDIAK
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDYDADFYKLSSDIAK 300

Query: 345 ETWVVSGSSTSSSSSRCNDDPLLRSRSWKR 373
           ETWVVSGSSTSSSSSRCNDDPLLRSRSWKR
Sbjct: 301 ETWVVSGSSTSSSSSRCNDDPLLRSRSWKR 330

[Close]
BLAST of CsaV3_2G024220 vs. NCBI nr
Match: XP_023546364.1 (uncharacterized protein LOC111805493 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 317.4 bits (812), Expect = 6.5e-83
Identity = 248/343 (72.30%), Postives = 261/343 (76.09%), Query Frame = 0 

Query: 48  MKRRNHSKSKPTAPPADLLVCFPARAHLTLLP----SPARPPAEPHRRHYRKAQP----- 107
           MK RN++K K  APPADLLVCFPARA LTLLP    SPAR  AEPHRRH +KA P     
Sbjct: 1   MKSRNNTKPKSIAPPADLLVCFPARARLTLLPKPTCSPARASAEPHRRHQKKAPPPSQSQ 60

Query: 108 -SPLPWAKEMSSEPTSPKVTCAGQIKIRPHSHRSTKNWQSVMEEIERIHNKKK-----NP 167
            SPL WAKEM+SEPTSPKVTCAGQIKI+PH+ RSTKNWQSVMEEIERIH KKK     N 
Sbjct: 61  ASPLLWAKEMASEPTSPKVTCAGQIKIKPHARRSTKNWQSVMEEIERIHKKKKIPNWGNQ 120

Query: 168 IRNQNPFGFKREIVNFLSCLRGFRFDFRCFRGFPQSDITTDXXXXXXXXXXXXXXXXXXX 227
           I++QNPFGFKREIVNFLSCLRGFRFDFRCFRGFP+SD  T   XXXXXXXXXXXXXXXXX
Sbjct: 121 IQDQNPFGFKREIVNFLSCLRGFRFDFRCFRGFPESDDITTEEXXXXXXXXXXXXXXXXX 180

Query: 228 XXXXXXXTRGRTMFSEWFMV---LQEGEEETKPINNDAVSSLEFQPSSVSVPPPNALLLM 287
           XXXXXXX   RTMFS+WFMV            P N+      E QP   SVPPPNALLLM
Sbjct: 181 XXXXXXXXXRRTMFSKWFMVXXXXXXXXXXXXPRNDTG----ELQP--CSVPPPNALLLM 240

Query: 288 RCRSAPNSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDY 347
           RCRSAP++           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       MDY
Sbjct: 241 RCRSAPST-----GWIERKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKESLVVMDY 300

Query: 348 DADFYKLSSDIAKETWVVSGSSTSSSSSRCNDDPLLRSRSWKR 373
           DADFYKLSSDIAKETWVVSGSST    SRCNDDP LRSRSWKR
Sbjct: 301 DADFYKLSSDIAKETWVVSGSST----SRCNDDPFLRSRSWKR 328

[Close]
BLAST of CsaV3_2G024220 vs. NCBI nr
Match: XP_022962582.1 (uncharacterized protein LOC111462985 [Cucurbita moschata])

HSP 1 Score: 288.1 bits (736), Expect = 4.2e-74
Identity = 235/328 (71.65%), Postives = 244/328 (74.39%), Query Frame = 0 

Query: 60  APPADLLVCFPARAHLTLLP----SPARPPAEPHRRHYRKAQP------SPLPWAKEMSS 119
           APPADLLVCFPARA LTLLP    SPAR  AEPHRRH +KA P      SPL WAKEM+S
Sbjct: 2   APPADLLVCFPARARLTLLPKPTCSPARASAEPHRRHQKKAPPPSQSQASPLLWAKEMAS 61

Query: 120 EPTSPKVTCAGQIKIRPHSHRSTKNWQSVMEEIERIHNKKK-----NPIRNQNPFGFKRE 179
           EPTSPKVTCAGQIKI+PH+ RSTKNWQSVMEEIERIH KKK     N IR+QNPFGFKRE
Sbjct: 62  EPTSPKVTCAGQIKIKPHARRSTKNWQSVMEEIERIHKKKKIPNWGNQIRDQNPFGFKRE 121

Query: 180 IVNFLSCLRGFRFDFRCFRGFPQSDITTDXXXXXXXXXXXXXXXXXXXXXXXXXXTRGRT 239
           IVNFLSCLRGFRFDFRCFRGFP+SD    XXXXXXXXXXXXXXXXXXXXXXXXXX     
Sbjct: 122 IVNFLSCLRGFRFDFRCFRGFPESDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181

Query: 240 MFSEWFMVLQEGEEETKPINNDAVSSLEFQPSSVSVPPPNALLLMRCRSAPNSLXXXXXX 299
                            P N+      E QP   SVPPPNALLLMRCRSAP++       
Sbjct: 182 XXXXXXXXXXXXXXXXXPRNDTG----ELQP--CSVPPPNALLLMRCRSAPST-----GW 241

Query: 300 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDYDADFYKLSSDIAKET 359
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      MDYDADFYKLSSDIAKET
Sbjct: 242 IERKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKESLVVMDYDADFYKLSSDIAKET 301

Query: 360 WVVSGSSTSSSSSRCNDDPLLRSRSWKR 373
           WVVSG    SSSSRCNDDP LRSRSWKR
Sbjct: 302 WVVSG----SSSSRCNDDPFLRSRSWKR 314

[Close]
BLAST of CsaV3_2G024220 vs. NCBI nr
Match: XP_022997528.1 (uncharacterized protein LOC111492421 [Cucurbita maxima])

HSP 1 Score: 256.1 bits (653), Expect = 1.8e-64
Identity = 218/349 (62.46%), Postives = 230/349 (65.90%), Query Frame = 0 

Query: 45  MRSMKRRNHSKSKPTAPPADLLVCFPARAHLTLLP----SPARPPAEPHRRHYRKAQP-- 104
           M+SMK RN+ K K  APPADLLVCFPARA LTLLP    SPAR  AEPHRRH +KA P  
Sbjct: 1   MKSMKTRNNPKPKSIAPPADLLVCFPARARLTLLPKPTCSPARASAEPHRRHQKKAPPLS 60

Query: 105 ----SPLPWAKEMSSEPTSPKVTCAGQIKIRPHSHRSTKNWQSVMEEIERIHNKKK---- 164
               SPL WAKE++SEPTSPKVTCAGQIKI+PH+ RSTKNWQSVMEEIERIH KKK    
Sbjct: 61  QSQASPLLWAKELASEPTSPKVTCAGQIKIKPHARRSTKNWQSVMEEIERIHKKKKIPNW 120

Query: 165 -NPIRNQNPFGFKREIVNFLSCLRGFRFDFRCFRGFPQSD------ITTDXXXXXXXXXX 224
            N I++QNPFGFKREIVNFLSCLRGFRFDFRCF+GFP+SD          XXXXXXXXXX
Sbjct: 121 GNQIQDQNPFGFKREIVNFLSCLRGFRFDFRCFKGFPESDDIXXXXXXXXXXXXXXXXXX 180

Query: 225 XXXXXXXXXXXXXXXXTRGRTMFSEWFMVLQEGEEETKPINNDAVSSLEFQPSSVSVPPP 284
           XXXXXXXXXXXXXXXX                              + E QP SV     
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGELQPCSV----- 240

Query: 285 NALLLMRCRSAPNSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 344
                                          XXXXXXXXXXXXXXXXXXXXXXXXXX   
Sbjct: 241 -------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXKES 300

Query: 345 XXXMDYDADFYKLSSDIAKETWVVSGSSTSSSSSRCNDDPLLRSRSWKR 373
              MDYDADFYKLSSDIAKETWVVSGSST    SRCNDDP LRSRSWKR
Sbjct: 301 LVVMDYDADFYKLSSDIAKETWVVSGSST----SRCNDDPFLRSRSWKR 309

[Close]
BLAST of CsaV3_2G024220 vs. TAIR10
Match: AT1G78110.1 (unknown protein)

HSP 1 Score: 146.0 bits (367), Expect = 4.7e-35
Identity = 165/339 (48.67%), Postives = 184/339 (54.28%), Query Frame = 0 

Query: 63  ADLLVCFPARAHLTLLPSPARPPAEP-----------------HRRHYRKAQPSPLPWAK 122
           ADLLVCFP+R HL L P P   P+ P                           SP+ WAK
Sbjct: 18  ADLLVCFPSRTHLALTPKPICSPSRPSDXXXXXXXXXXXXXXXXXXXXXXXXXSPVLWAK 77

Query: 123 EMSS---------EPTSPKVTCAGQIKIRPHSHRST-KNWQSVMEEIERIHNKKKNPIRN 182
           + SS         EPTSPKVTCAGQIK+RP       KNWQSVMEEIERIH+ +      
Sbjct: 78  QASSKNMGGDEIAEPTSPKVTCAGQIKVRPSKCGGRGKNWQSVMEEIERIHDNRS----Q 137

Query: 183 QNPFGFKREIVNFLSCLRGFRFDFRCFRGFPQSDITTDXXXXXXXXXXXXXXXXXXXXXX 242
              FG K++++ FL+CLR  +FDFRCF  F  +D+ T XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 138 SKFFGLKKDVMGFLTCLRNIKFDFRCFGDFRHADV-TXXXXXXXXXXXXXXXXXXXXXXX 197

Query: 243 XXXXTRGRTMFSEWFMVLQEGEEETKPINNDAVSSLEFQPSSVSVPPPNALLLMRCRSAP 302
           XXXX                               LE   +  +VPPPNALLLMRCRSAP
Sbjct: 198 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLEDTETEPAVPPPNALLLMRCRSAP 257

Query: 303 NSL---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDYDAD 362
                         XXXXXXXXXXXXXXXXXXXXXXXX                M YD +
Sbjct: 258 AKSWLEERMKVKTEXXXXXXXXXXXXXXXXXXXXXXXXKDLRSLMEEEKMELVLMRYDTE 317

Query: 363 FYKLSSDIAKETWVVSGSSTSSSSSRCNDDPLLRSRSWK 372
           FY+LSSDIAKETWVV G            DPL RSRSWK
Sbjct: 318 FYRLSSDIAKETWVVGGI----------QDPLSRSRSWK 341

[Close]
BLAST of CsaV3_2G024220 vs. TAIR10
Match: AT1G22230.1 (unknown protein)

HSP 1 Score: 137.1 bits (344), Expect = 2.2e-32
Identity = 175/336 (52.08%), Postives = 195/336 (58.04%), Query Frame = 0 

Query: 57  KPTAPPADLLVCFPARAHLTLLPSPARPPA---------------EPHRRHYRKAQPSPL 116
           K +   ADL+VCFP+RAHL+L       P+                              
Sbjct: 8   KSSGYSADLMVCFPSRAHLSLPSKSISSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 67

Query: 117 PWAKEMSSEPTSPKVTCAGQIKIRPHSH-RSTKNWQSVMEEIERIHNKKKNPIRNQNPFG 176
                    PTSPKVTCAGQIK+R        KNWQS+M EIE+IH  K         FG
Sbjct: 68  XXXXXXXXXPTSPKVTCAGQIKVRSSKRDGGGKNWQSLMAEIEKIHRSKS----ESKFFG 127

Query: 177 FKREIVNFLSCLRGFRFDFRCFRGFPQSDITTDXXXXXXXXXXXXXXXXXXXXXXXXXXT 236
            KR+++ FL+CLR   FDFRCF  FP  DI         XXXXXXXXXXXXXXXXXXXX 
Sbjct: 128 IKRDVMGFLTCLRD--FDFRCFGAFPPVDI--------IXXXXXXXXXXXXXXXXXXXXX 187

Query: 237 RGRTMFSEWFMVLQEGEEETKPINNDAVSSLE--FQPSSVSVPPPNALLLMRCRSAP--N 296
                FS+W MVL E     K  N + V   E  F     +VPPPNALLLMRCRSAP  N
Sbjct: 188 XXXXXFSKWLMVLHE-----KQNNEECVDGKENVFSDVETAVPPPNALLLMRCRSAPVKN 247

Query: 297 SLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDYDADFYKL 356
              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      M+YD ++YKL
Sbjct: 248 WSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKMNLVVMNYDTNYYKL 307

Query: 357 SSDIAKETWVVSGSSTSSSSSRCNDDPLLRSRSWKR 373
           S+DIAKETWVV G            DPL RSRSWK+
Sbjct: 308 SNDIAKETWVVGGI----------QDPLFRSRSWKK 314

[Close]
BLAST of CsaV3_2G024220 vs. TrEMBL
Match: tr|A0A1S3BDB9|A0A1S3BDB9_CUCME (uncharacterized protein LOC103488403 OS=Cucumis melo OX=3656 GN=LOC103488403 PE=4 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 7.8e-125
Identity = 307/325 (94.46%), Postives = 308/325 (94.77%), Query Frame = 0 

Query: 48  MKRRNHSKSKPTAPPADLLVCFPARAHLTLLPSPARPPAEPHRRHYRKAQPSPLPWAKEM 107
           MKRRNHSKSKPTAPPADLLVCFPARAHLTLLPSPAR PAEPHRRHYRKAQPSPLPWAKEM
Sbjct: 1   MKRRNHSKSKPTAPPADLLVCFPARAHLTLLPSPARAPAEPHRRHYRKAQPSPLPWAKEM 60

Query: 108 SSEPTSPKVTCAGQIKIRPHSHRSTKNWQSVMEEIERIHNKKKNPIRNQNPFGFKREIVN 167
           SSEPTSPKVTCAGQIKIRPH+HRSTKNWQSVMEEIERIHNKKKNPIRNQNP GFKREIVN
Sbjct: 61  SSEPTSPKVTCAGQIKIRPHAHRSTKNWQSVMEEIERIHNKKKNPIRNQNPLGFKREIVN 120

Query: 168 FLSCLRGFRFDFRCFRGFPQSDITTDXXXXXXXXXXXXXXXXXXXXXXXXXXTRGRTMFS 227
           FLSCLRGFRFDFRCFRGFPQSDITTDXXXXXXXXXXXXXXXXXXXXXXXXXX RGRTMFS
Sbjct: 121 FLSCLRGFRFDFRCFRGFPQSDITTDXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRTMFS 180

Query: 228 EWFMVLQEGEEETKPINNDAVSSLEFQPSSVSVPPPNALLLMRCRSAPNSLXXXXXXXXX 287
           EWFMVLQE EEETKPINNDAVSSLEFQPSSVSVPPPNALLLMRCRSAPNSL         
Sbjct: 181 EWFMVLQEEEEETKPINNDAVSSLEFQPSSVSVPPPNALLLMRCRSAPNSL-----LRKP 240

Query: 288 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDYDADFYKLSSDIAKETWVV 347
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    ADFYKLSSDIAKETWVV
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADFYKLSSDIAKETWVV 300

Query: 348 SGSSTSSSSSRCNDDPLLRSRSWKR 373
           SGSSTSSSSSRCNDDPLLRSRSWKR
Sbjct: 301 SGSSTSSSSSRCNDDPLLRSRSWKR 320

[Close]
BLAST of CsaV3_2G024220 vs. TrEMBL
Match: tr|A0A0A0LMI6|A0A0A0LMI6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G345900 PE=4 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 1.1e-121
Identity = 312/330 (94.55%), Postives = 312/330 (94.55%), Query Frame = 0 

Query: 45  MRSMKRRNHSKSKPTAPPADLLVCFPARAHLTLLPSPARPPAEPHRRHYRKAQPSPLPWA 104
           MRSMKRRNHSKSKPTAPPADLLVCFPARAHLTLLPSPARPPAEPHRRHYRKAQPSPLPWA
Sbjct: 1   MRSMKRRNHSKSKPTAPPADLLVCFPARAHLTLLPSPARPPAEPHRRHYRKAQPSPLPWA 60

Query: 105 KEMSSEPTSPKVTCAGQIKIRPHSHRSTKNWQSVMEEIERIHNKKKNPIRNQNPFGFKRE 164
           KEMSSEPTSPKVTCAGQIKIRPHSHRSTKNWQSVMEEIERIHNKKKNPIRNQNPFGFKRE
Sbjct: 61  KEMSSEPTSPKVTCAGQIKIRPHSHRSTKNWQSVMEEIERIHNKKKNPIRNQNPFGFKRE 120

Query: 165 IVNFLSCLRGFRFDFRCFRGFPQSDITTDXXXXXXXXXXXXXXXXXXXXXXXXXXTRGRT 224
           IVNFLSCLRGFRFDFRCFRGFPQSDITTDXXXXXXXXXXXXXXXXXXXXXXXXXXTRGRT
Sbjct: 121 IVNFLSCLRGFRFDFRCFRGFPQSDITTDXXXXXXXXXXXXXXXXXXXXXXXXXXTRGRT 180

Query: 225 MFSEWFMVLQEGEEETKPINNDAVSSLEFQPSSVSVPP--PNALLLMRCRSAPNSLXXXX 284
           MFSEWFMVLQEGEEETKPINNDAVSSLEFQPSSVSVPP                  XXXX
Sbjct: 181 MFSEWFMVLQEGEEETKPINNDAVSSLEFQPSSVSVPPXXXXXXXXXXXXXXXXXXXXXX 240

Query: 285 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDYDADFYKLSSDIAK 344
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDYDADFYKLSSDIAK
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDYDADFYKLSSDIAK 300

Query: 345 ETWVVSGSSTSSSSSRCNDDPLLRSRSWKR 373
           ETWVVSGSSTSSSSSRCNDDPLLRSRSWKR
Sbjct: 301 ETWVVSGSSTSSSSSRCNDDPLLRSRSWKR 330

[Close]
BLAST of CsaV3_2G024220 vs. TrEMBL
Match: tr|A0A2C9U1A4|A0A2C9U1A4_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G068600 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 8.2e-50
Identity = 222/381 (58.27%), Postives = 247/381 (64.83%), Query Frame = 0 

Query: 48  MKRRNHSKSKPTAPPADLLVCFPARAHLTLLPSPARPPAEP------------------- 107
           MK R  +K    AP ADLLVCFP+RAHLTLLP P   PA P                   
Sbjct: 1   MKAREANKG---APSADLLVCFPSRAHLTLLPKPICSPARPVEPSKXXXXXXXXXXXXXX 60

Query: 108 -----HRRHYRKAQPSPLPWAK------EMSSEPTSPKVTCAGQIKIRPHSHRSTKNWQS 167
                  R     Q SPL WAK      E+SSEPTSPKVTCAGQIK+R H   + K+WQS
Sbjct: 61  XLKKSSTRGGSGGQASPLLWAKNKQMGSEISSEPTSPKVTCAGQIKVR-HKTVACKSWQS 120

Query: 168 VMEEIERIHNKKKNPIRN--QNPFGFKREIVNFLSCLRGFRFDFRCFRGFPQSDITTDXX 227
           VMEEIERIHN +K+  R+   +  GFK++I+ FL+CLR  RFDFRCF   PQ+DITTD  
Sbjct: 121 VMEEIERIHNNRKHKKRSSWMDSLGFKKDIMQFLTCLRNIRFDFRCFGSIPQTDITTD-- 180

Query: 228 XXXXXXXXXXXXXXXXXXXXXXXXTRGRTMFSEWFMVLQEGE------------EETKPI 287
           XXXXXXXXXXXXXXXXXXXXXXXX    TMFS+WFMVLQE +            E+ KP 
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXTMFSKWFMVLQENQNTEFCREKRKDKEKEKPC 240

Query: 288 NNDAVSSLEFQPSSVSVPPPNALLLMRCRSAP------------NSLXXXXXXXXXXXXX 347
           N++ +       ++ SVPPPNALLLMRCRSAP               XXXXXXXXXXXXX
Sbjct: 241 NDEPI-------ATPSVPPPNALLLMRCRSAPAKSWLEXXXXXXXXXXXXXXXXXXXXXX 300

Query: 348 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDYDADFYKLSSDIAKETWVVSGSS 373
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  M YD +FYK+SSDIAKETWVV G  
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVMRYDTNFYKISSDIAKETWVVGGMR 358

[Close]
BLAST of CsaV3_2G024220 vs. TrEMBL
Match: tr|F6H0W4|F6H0W4_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g05370 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 5.5e-46
Identity = 186/346 (53.76%), Postives = 202/346 (58.38%), Query Frame = 0 

Query: 60  APPADLLVCFPARAHLTLLPSPARPPAEPHRRHY-----------------------RKA 119
           AP ADLLVCFP+RAHLTL+P P   PA                                 
Sbjct: 9   APSADLLVCFPSRAHLTLMPKPICSPARXXXXXXXXXXXXXXXXXXXXXXXKKSSTRNGG 68

Query: 120 QPSPLPWAKEMS-----SEPTSPKVTCAGQIKIRPHSHRSTKNWQSVMEEIERIHNKKKN 179
           Q SPL WAK        SEPTSPKVTCAGQIK+R H   S KNWQSVMEEIERIHN KK+
Sbjct: 69  QASPLLWAKTKPMGTEISEPTSPKVTCAGQIKVR-HKTSSCKNWQSVMEEIERIHNNKKH 128

Query: 180 PIRNQ--NPFGFKREIVNFLSCLRGFRFDFRCFRGFPQSDITTDXXXXXXXXXXXXXXXX 239
             R       GFK+EI+ FL+CLR  RFDFRCF  FP+S  T+D                
Sbjct: 129 KKRPTWVEALGFKKEIMQFLTCLRSIRFDFRCFGSFPESGNTSD----DEEEDGDQYQHN 188

Query: 240 XXXXXXXXXXTRGRTMFSEWFMVLQEGE---EETKPINNDAVSSLEFQPSSVSVPPPNAL 299
                        RT+FS+WFMVLQE +      + I   + S  E    + SVPPPNAL
Sbjct: 189 QVGVEESDDNETSRTIFSKWFMVLQENQSCGSNKEEIKEKSKSYGEESAVAPSVPPPNAL 248

Query: 300 LLMRCRSAPNSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 359
           LLMRCRSAP       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 249 LLMRCRSAP-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 308

Query: 360 MDYDADFYKLSSDIAKETWVVSGSSTSSSSSRCNDDPLLRSRSWKR 373
                DFYK SSDIAKETWVV G+           DPL RSRSWKR
Sbjct: 309 XXXXXDFYKFSSDIAKETWVVGGAR----------DPLSRSRSWKR 332

[Close]
BLAST of CsaV3_2G024220 vs. TrEMBL
Match: tr|A0A1U8A4G2|A0A1U8A4G2_NELNU (uncharacterized protein LOC104600126 OS=Nelumbo nucifera OX=4432 GN=LOC104600126 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 9.4e-46
Identity = 182/344 (52.91%), Postives = 206/344 (59.88%), Query Frame = 0 

Query: 55  KSKPTAPPADLLVCFPARAHLTLLPSPARPPAEP-------------HRRHYRKAQPSPL 114
           +   TAPPADLLVCFP+RAHLTL+P P   PA P                     Q SPL
Sbjct: 4   RENKTAPPADLLVCFPSRAHLTLMPKPICSPARPTEXXXXXXXXXXXXXXXXXXGQASPL 63

Query: 115 PWAKEMS------SEPTSPKVTCAGQIKIRPHSHRSTKNWQSVMEEIERIHNKKKNPIRN 174
            WAK         +EPTSPKVTCAGQIK+RP S  S+KNWQSVMEEIER+HN +K   + 
Sbjct: 64  LWAKNKQQAGTEIAEPTSPKVTCAGQIKVRPKS--SSKNWQSVMEEIERLHNSRKQKKKP 123

Query: 175 Q--NPFGFKREIVNFLSCLRGFRFDFRCFRGFPQSDITTDXXXXXXXXXXXXXXXXXXXX 234
                 GFK++I+ FL+CLR  RFD RCF  F  SD+   XXXXXXXXXXXXXXXXXXXX
Sbjct: 124 TWLETLGFKKDIMQFLTCLRSLRFDLRCFGSFHGSDVXXXXXXXXXXXXXXXXXXXXXXX 183

Query: 235 XXXXXXTRGRTMFSEWFMVLQEGE-----EETKPINNDAVSSLEFQPSSVSVPPPNALLL 294
                 +  RT+FS+WFMVLQE +     +E K      +S  E   ++ S PPPNALLL
Sbjct: 184 SDGSGAS--RTIFSKWFMVLQENQNNTFSKEEKCGEERDLSCDEGSVAAPSAPPPNALLL 243

Query: 295 MRCRSAPNSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMD 354
           MRCRSAP                       XXXXXXXXXXXXXXXXXXXXXXXXX   M 
Sbjct: 244 MRCRSAP--------------AKGWLEAKQXXXXXXXXXXXXXXXXXXXXXXXXXLVLMS 303

Query: 355 YDADFYKLSSDIAKETWVVSGSSTSSSSSRCNDDPLLRSRSWKR 373
           Y  DF+K+S DIAKETWVV              DPL RSRSWKR
Sbjct: 304 YAPDFFKISPDIAKETWVVGRMR----------DPLSRSRSWKR 319

The following BLAST results are available for this feature:
BLAST of CsaV3_2G024220 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008445342.21.2e-12494.46PREDICTED: uncharacterized protein LOC103488403 [Cucumis melo][more]
XP_004143011.21.6e-12194.55PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2-like [Cuc... [more]
XP_023546364.16.5e-8372.30uncharacterized protein LOC111805493 [Cucurbita pepo subsp. pepo][more]
XP_022962582.14.2e-7471.65uncharacterized protein LOC111462985 [Cucurbita moschata][more]
XP_022997528.11.8e-6462.46uncharacterized protein LOC111492421 [Cucurbita maxima][more]
BLAST of CsaV3_2G024220 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G78110.14.7e-3548.67unknown protein[more]
AT1G22230.12.2e-3252.08unknown protein[more]
BLAST of CsaV3_2G024220 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G024220 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BDB9|A0A1S3BDB9_CUCME7.8e-12594.46uncharacterized protein LOC103488403 OS=Cucumis melo OX=3656 GN=LOC103488403 PE=... [more]
tr|A0A0A0LMI6|A0A0A0LMI6_CUCSA1.1e-12194.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G345900 PE=4 SV=1[more]
tr|A0A2C9U1A4|A0A2C9U1A4_MANES8.2e-5058.27Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G068600 PE=4 SV=... [more]
tr|F6H0W4|F6H0W4_VITVI5.5e-4653.76Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g05370 PE=4 SV=... [more]
tr|A0A1U8A4G2|A0A1U8A4G2_NELNU9.4e-4652.91uncharacterized protein LOC104600126 OS=Nelumbo nucifera OX=4432 GN=LOC104600126... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G024220.1CsaV3_2G024220.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 276..307
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 346..363
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 346..372
NoneNo IPR availablePANTHERPTHR33448FAMILY NOT NAMEDcoord: 56..372
NoneNo IPR availablePANTHERPTHR33448:SF3SUBFAMILY NOT NAMEDcoord: 56..372

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_2G024220CSPI02G16650Wild cucumber (PI 183967)cpicucB081
CsaV3_2G024220Cucsa.393840Cucumber (Gy14) v1cgycucB596
CsaV3_2G024220MELO3C011359Melon (DHL92) v3.5.1cucmeB122
CsaV3_2G024220MELO3C011359.2Melon (DHL92) v3.6.1cucmedB116
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_2G024220Cucumber (Gy14) v2cgybcucB064