CsaV3_2G016270 (gene) Cucumber (Chinese Long) v3

NameCsaV3_2G016270
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2 : 13480417 .. 13481476 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCAAAAACATTATAAATATTTCACCAAACAAAGTGGAATAAAATTTGCTACAAATCATATACATCCACAAAATCATGATATTAATATAATATATATATATATATATTATAACATTATACAAATAAATCTCAGTTTTAATTACACATCACTACATTGATCGATCACTCCCAAAGAAAAATAAAGGGAAAATGACATAAATATTTTGTAAAATAAAATATTGTGTTTTCTTCAAAAGAAAAAAAAAAAAAGGAAAATACATGAAAGTTTCTGTTTTTTTTTTTTTTTTCCTATCCGCCAGTCAACTACTAGAGAATGAAGCTTCATCGGAATCTCAAACACGACGAACTTCATGGACGACGGCGGCGAGCCACTCGATGCAACCAAAACCGTGCTTCTTGAGGATACGGAGAAAGGTAGGGTGGGAGGTGGTGGGTGGGGTGAGCATGGGCTGAAGGTAGGCGAGGGCGGCGTGTTTGACAAGAGGGTTCTTGATGGGGAGTTGGTCGAAGGCTGGGGAGGTGGCGGATGGGGGCGGAGAAGGGGAGTCGGGGAGGAGGTCTTTGAGGCTGGTGTAGGATTGAAGAGGGGTCATTTCGATGTCGTCGGAGAATTCTAGTTCGGGAGAGCTGAGAGGGTGATTGGGAGAGAGGAAGGAAGTTGGAGAAGGAGAAGGAGAAGGAGAAGGAGAATCTTCCATGGTGGAGATGGAGAGGAGAGAGAGATTGAAATTGGGATTTTAATGGAATTACTAAGAAAGATTTGGAGAGAAAGAGAGAGGGAGAGTCTGTGTGTGATTTGGTTTGTACAAATAATGGTGTAGGAGAGAAGGTGTGTGTGTGTGTTGTGAGGAGTGGAGAGGAATTTGATGGGAGTTTTCGAGCGTGGGAACCACGCGCTTTGTAGGAGGGTGGGACTTGATTATCAATTATAATTACTAACGTTTACAAATATAGCTGTAAAAATCAAAGTCTATAAACCATATTACAAATATGATCTACCATTCAAACATATATAACAAAAGTCTATCATTCGATTTTGCTATATTTATAATTTTTAAAA

mRNA sequence

ATGGACGACGGCGGCGAGCCACTCGATGCAACCAAAACCGTGCTTCTTGAGGATACGGAGAAAGGTAGGGTGGGAGGTGGTGGGTGGGGTGAGCATGGGCTGAAGGTAGGCGAGGGCGGCGTGTTTGACAAGAGGGTTCTTGATGGGGAGTTGGTCGAAGGCTGGGGAGGTGGCGGATGGGGGCGGAGAAGGGGAGTCGGGGAGGAGGTCTTTGAGGCTGGTGTAGGATTGAAGAGGGGTCATTTCGATGTCGTCGGAGAATTCTAG

Coding sequence (CDS)

ATGGACGACGGCGGCGAGCCACTCGATGCAACCAAAACCGTGCTTCTTGAGGATACGGAGAAAGGTAGGGTGGGAGGTGGTGGGTGGGGTGAGCATGGGCTGAAGGTAGGCGAGGGCGGCGTGTTTGACAAGAGGGTTCTTGATGGGGAGTTGGTCGAAGGCTGGGGAGGTGGCGGATGGGGGCGGAGAAGGGGAGTCGGGGAGGAGGTCTTTGAGGCTGGTGTAGGATTGAAGAGGGGTCATTTCGATGTCGTCGGAGAATTCTAG

Protein sequence

MDDGGEPLDATKTVLLEDTEKGRVGGGGWGEHGLKVGEGGVFDKRVLDGELVEGWGGGGWGRRRGVGEEVFEAGVGLKRGHFDVVGEF
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G016270.1CsaV3_2G016270.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_2G016270CsGy2G013670Cucumber (Gy14) v2cgybcucB064
CsaV3_2G016270MELO3C020838Melon (DHL92) v3.5.1cucmeB102
CsaV3_2G016270Lsi10G005120Bottle gourd (USVL1VR-Ls)cuclsiB104
CsaV3_2G016270MELO3C020838.2Melon (DHL92) v3.6.1cucmedB095
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_2G016270Silver-seed gourdcarcucB0842
CsaV3_2G016270Cucumber (Gy14) v1cgycucB351
CsaV3_2G016270Cucurbita pepo (Zucchini)cpecucB0338
CsaV3_2G016270Wild cucumber (PI 183967)cpicucB080
CsaV3_2G016270Watermelon (Charleston Gray)cucwcgB134
CsaV3_2G016270Watermelon (97103) v1cucwmB153
CsaV3_2G016270Watermelon (97103) v2cucwmbB120
CsaV3_2G016270Wax gourdcucwgoB183
CsaV3_2G016270Wax gourdcucwgoB187